Carg10832 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10832
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Phosphotransferase
Location	Carg_Chr05: 11879016 .. 11880138 (-)
RNA-Seq Expression	Carg10832
Synteny	Carg10832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGAGAGTTTCGAAGCCGCGAAATGACCGGGAAATTATGGCGCCTTCGTCGCAGATCAAGCGGCGGAAAATCGATCATACGCCGTCCCGCCGGTAATTCTTGTTTCTTCTTGACGGCCACCGCCGTTGCGTAAATGGATAATTTCTTCTTTGTTCGATTCAGTTTATTTTTCTTTGTCGTGAGTTGTTAGATGAAACACCAAGGATGTGAGGGTTTTAAATTTTGAAGATTCAGGTTACGACGAAGATGTTAGTTACTGCTGATGGTTTCGTTAGGCTACTGAGTTGACTGGATTGGACTTCTAGATGTTTCAATTGTTGAGATTTCTCAGTTTAGTTGCTGTTAGATAAAGAAATGGTGTTTGTGTTGGATTTGGAGTATTGAATGAAATTATCGATTGGGAGAATTTAATTGTGTGTTGTTTTGTTATTTTCCTCTTGGATGATAATCTCAACTACTGGATTGGATTGCACCTTCGTAATTGATCTTTTCGACAATGAAATAAAAGATCAAAAGAACAGCGGACTTTAGTATTAGCTGCTTTAATAATTCTGAGTTGAATTCATTCGTAAAACCTCTCTATTGCAGAATTTTATCTTCAGTTGGTGTAGAGAGACAAGGAATTTCAGTCTCAACTAAAGGGTCGATTGTGAGAATTTTTATTTATTTGGTTTTGCTTTCTTAGTAAACTATCATACTTATTTATCAACCATTAGATTGCTTATGATGACTTTGAATTTGCACAGTGTCCTGTTTCTAGTGGAAGTGAATTTAGGATCCTACAAGATAAGAGTTCTGCTGTGGCAGAGGCCAAACAAGATTGTTGCACTGGTAATTTTAAAATCCTTGATTCCCCATTTGGAAATTTTCTTTTGCCTGTTATTCCTTCTCCCGCGGAATTGGTTGAGTAGTAGCTTCGAATCTAATACTGGTTCTACCTGATTTTTTAGCTGGTATGCTTTTGTGAGTGTTGAACTTTTTTGTATGATTGAGATATGATTACTGTATGAGACTTGTGTTCCAAACCTTATCCTATAGAAATGTTCTCTGTTAATATAAGTTTTTCCCGAGTGATTGGATATGGCCATTTGATAATAAAACTTTAAAAAGTTAAATG

mRNA sequence

ATGGAAAGGAGAGTTTCGAAGCCGCGAAATGACCGGGAAATTATGGCGCCTTCGTCGCAGATCAAGCGGCGGAAAATCGATCATACGCCGTCCCGCCGAATTTTATCTTCAGTTGGTGTAGAGAGACAAGGAATTTCAGTCTCAACTAAAGGGTCGATTTGTCCTGTTTCTAGTGGAAGTGAATTTAGGATCCTACAAGATAAGAGTTCTGCTGTGGCAGAGGCCAAACAAGATTGTTGCACTGGTAATTTTAAAATCCTTGATTCCCCATTTGGAAATTTTCTTTTGCCTGTTATTCCTTCTCCCGCGGAATTGGTTGAGTAGTAGCTTCGAATCTAATACTGGTTCTACCTGATTTTTTAGCTGGTATGCTTTTGTGAGTGTTGAACTTTTTTGTATGATTGAGATATGATTACTGTATGAGACTTGTGTTCCAAACCTTATCCTATAGAAATGTTCTCTGTTAATATAAGTTTTTCCCGAGTGATTGGATATGGCCATTTGATAATAAAACTTTAAAAAGTTAAATG

Coding sequence (CDS)

ATGGAAAGGAGAGTTTCGAAGCCGCGAAATGACCGGGAAATTATGGCGCCTTCGTCGCAGATCAAGCGGCGGAAAATCGATCATACGCCGTCCCGCCGAATTTTATCTTCAGTTGGTGTAGAGAGACAAGGAATTTCAGTCTCAACTAAAGGGTCGATTTGTCCTGTTTCTAGTGGAAGTGAATTTAGGATCCTACAAGATAAGAGTTCTGCTGTGGCAGAGGCCAAACAAGATTGTTGCACTGGTAATTTTAAAATCCTTGATTCCCCATTTGGAAATTTTCTTTTGCCTGTTATTCCTTCTCCCGCGGAATTGGTTGAGTAG

Protein sequence

MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGSEFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE

Homology

[Close]

BLAST of Carg10832 vs. NCBI nr
Match: KAG7030460.1 (hypothetical protein SDJN02_08807, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
           MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS
Sbjct: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60

Query: 61  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 108
           EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE
Sbjct: 61  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 107

[Close]

BLAST of Carg10832 vs. NCBI nr
Match: KAG6599484.1 (hypothetical protein SDJN03_09262, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
           MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS
Sbjct: 3   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 62

Query: 61  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 108
           EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE
Sbjct: 63  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 109

[Close]

BLAST of Carg10832 vs. NCBI nr
Match: TYK10748.1 (hexokinase-1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-39
Identity = 87/107 (81.31%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
           MER+VS PRNDREIMAPSSQIKRRKIDH PSRR LSS  +ER G+S STKGS  PV+SGS
Sbjct: 1   MERKVSMPRNDREIMAPSSQIKRRKIDHHPSRRSLSSAAIERHGVSASTKGSTFPVASGS 60

Query: 61  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 108
           EFRILQDKSSA+AEAKQD CTGNFK+LDSPFGNFLLPVIPS  E  E
Sbjct: 61  EFRILQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTEFSE 107

[Close]

BLAST of Carg10832 vs. NCBI nr
Match: XP_004141024.1 (uncharacterized protein LOC101218541 isoform X1 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 84/107 (78.50%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
           MER+V  PRNDREIMAPSSQIKRRKIDH PSRR  SS  VER G+  STKGS  PV+SGS
Sbjct: 1   MERKVPMPRNDREIMAPSSQIKRRKIDHPPSRRSSSSAAVERHGVLASTKGSTFPVASGS 60

Query: 61  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 108
           EFR+LQDKSSA+AEAKQD CTGNFK+LDSPFGNFLLPVIPS  E  E
Sbjct: 61  EFRMLQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTEFFE 107

[Close]

BLAST of Carg10832 vs. NCBI nr
Match: XP_022946033.1 (hexokinase-1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 164.9 bits (416), Expect = 3.9e-37
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
          MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPV+SGS
Sbjct: 1  MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVASGS 60

Query: 61 EFRILQDKSSAVAEAKQDCCTGNFKI 87
          EFRILQDKSSAVAEAKQDCCTGNFK+
Sbjct: 61 EFRILQDKSSAVAEAKQDCCTGNFKM 86

[Close]

BLAST of Carg10832 vs. ExPASy TrEMBL
Match: A0A5D3CHN8 (Hexokinase-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00610 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 87/107 (81.31%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
           MER+VS PRNDREIMAPSSQIKRRKIDH PSRR LSS  +ER G+S STKGS  PV+SGS
Sbjct: 1   MERKVSMPRNDREIMAPSSQIKRRKIDHHPSRRSLSSAAIERHGVSASTKGSTFPVASGS 60

Query: 61  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 108
           EFRILQDKSSA+AEAKQD CTGNFK+LDSPFGNFLLPVIPS  E  E
Sbjct: 61  EFRILQDKSSAIAEAKQDGCTGNFKVLDSPFGNFLLPVIPSSTEFSE 107

[Close]

BLAST of Carg10832 vs. ExPASy TrEMBL
Match: A0A6J1G2N7 (Phosphotransferase OS=Cucurbita moschata OX=3662 GN=LOC111450243 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.9e-37
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
          MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPV+SGS
Sbjct: 1  MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVASGS 60

Query: 61 EFRILQDKSSAVAEAKQDCCTGNFKI 87
          EFRILQDKSSAVAEAKQDCCTGNFK+
Sbjct: 61 EFRILQDKSSAVAEAKQDCCTGNFKM 86

[Close]

BLAST of Carg10832 vs. ExPASy TrEMBL
Match: A0A6J1DMU3 (uncharacterized protein LOC111021873 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021873 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.3e-37
Identity = 85/107 (79.44%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 1   MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
           MER+VSKP NDREIMAPSSQ KRRK D TPSRR LSS  VER+ +S STKGS  PV++GS
Sbjct: 1   MERKVSKPGNDREIMAPSSQSKRRKTDQTPSRRTLSSAAVERERVSASTKGSTFPVATGS 60

Query: 61  EFRILQDKSSAVAEAKQDCCTGNFKILDSPFGNFLLPVIPSPAELVE 108
           EFRI Q KS AVA+AKQD CTGNFKILDSPFGNFLLPVIPSPAE VE
Sbjct: 61  EFRIQQAKSFAVAQAKQDGCTGNFKILDSPFGNFLLPVIPSPAEFVE 107

[Close]

BLAST of Carg10832 vs. ExPASy TrEMBL
Match: A0A6J1KHE9 (Phosphotransferase OS=Cucurbita maxima OX=3661 GN=LOC111493878 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.0e-35
Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
          MER VSKPRNDREI APSSQIKRRKIDHTPSRRILSSVGV+RQGISVSTKGS CPV+SGS
Sbjct: 1  MERSVSKPRNDREIRAPSSQIKRRKIDHTPSRRILSSVGVQRQGISVSTKGSTCPVASGS 60

Query: 61 EFRILQDKSSAVAEAKQDCCTGNFKI 87
          EFRILQDKSSAVAEAKQDCCTGNFK+
Sbjct: 61 EFRILQDKSSAVAEAKQDCCTGNFKM 86

[Close]

BLAST of Carg10832 vs. ExPASy TrEMBL
Match: A0A5A7V2P5 (Phosphotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00850 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.6e-28
Identity = 69/86 (80.23%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1  MERRVSKPRNDREIMAPSSQIKRRKIDHTPSRRILSSVGVERQGISVSTKGSICPVSSGS 60
          MER+VS PRNDREIMAPSSQIKRRKIDH PSRR LSS  +ER  +S STKGS  PV+SGS
Sbjct: 1  MERKVSMPRNDREIMAPSSQIKRRKIDHHPSRRSLSSAAIERHRVSASTKGSTFPVASGS 60

Query: 61 EFRILQDKSSAVAEAKQDCCTGNFKI 87
          EFRILQDKSSA+AEAKQD CTGNFK+
Sbjct: 61 EFRILQDKSSAIAEAKQDGCTGNFKM 86

The following BLAST results are available for this feature:

BLAST of Carg10832 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030460.1	1.4e-50	100.00	hypothetical protein SDJN02_08807, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6599484.1	1.4e-50	100.00	hypothetical protein SDJN03_09262, partial [Cucurbita argyrosperma subsp. sorori...	[more]
TYK10748.1	3.2e-39	81.31	hexokinase-1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_004141024.1	3.0e-37	78.50	uncharacterized protein LOC101218541 isoform X1 [Cucumis sativus]	[more]
XP_022946033.1	3.9e-37	97.67	hexokinase-1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg10832 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg10832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHN8	1.6e-39	81.31	Hexokinase-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1G2N7	1.9e-37	97.67	Phosphotransferase OS=Cucurbita moschata OX=3662 GN=LOC111450243 PE=3 SV=1	[more]
A0A6J1DMU3	7.3e-37	79.44	uncharacterized protein LOC111021873 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1KHE9	4.0e-35	93.02	Phosphotransferase OS=Cucurbita maxima OX=3661 GN=LOC111493878 PE=3 SV=1	[more]
A0A5A7V2P5	3.6e-28	80.23	Phosphotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00...	[more]

BLAST of Carg10832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR48205	FAMILY NOT NAMED	coord: 15..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10832-RA	Carg10832-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0001678	cellular glucose homeostasis
biological_process	GO:0051156	glucose 6-phosphate metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0019318	hexose metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004340	glucokinase activity
molecular_function	GO:0005536	glucose binding