Carg10824 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTAGAGAAGGAGGTGTAGAAATATCTTAATCGCTAAGATTGAGTTAAAATAATTTATTAGTTTCAATCTAGAATGTACATGAGCTAGAATTTGGAATCGATTCTGACTTGAATTTTTGGGTGTGTGCGGATAAATGCTTGATCCTCAATTGATTATTCAGTTTCCATATAAATTCGAATTCTGCGGATGATTCCATTTCTTAGTAGAGAGATTCTCTCACTCTCCGTTTCTCTAAATTGATCCATTCCTTAACATGCGGTGTTTCGTTTCTATTTCTTTCGCTTTCCGATCGATACCTCTTTTCCTTCGATCTTCCAATACTTCCGATTCTCACCCATTCATGTAATTTTCGTATTATCCCTCATTTTTACTGAAATTCCGATTTGATTTTACCCCTAATTCCGTGGAAATCGGGTTTCGATTTGATCATCTGGGTATTAAATTTTGTTCTGGGGTTTCGATTTGTTCATCTGGATATTAGAATTTTCTTCTGGTGTTCTTGCGATGAAGATCGTGGAATTGGAAGATGCTGGGAATGATCGGGAAAATGGAATGGGTAGCGATCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTCTTTTACCCTACTCTTTTGTATAACGTTCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGATGAAATCGATCAGGTTCGTTCATTTCTTTTTTTGCTTCGTGTTCATCGAACTGCTTAAGGATTATCTTTGAACTTTGAAGGCGTTTTTGATCTGTTTGGCTTTTAATTGTTGAAGTTTGTATGTGTGATGGATTTGATTGTTAGAATCTGATGAACTTGATGATCATGATATGATAAGACTGTATGAATCCACGAGACTTTGTGGATTTGCTTCCTTTTTTGTGTGTGTTTATGTGATTTTTGTTACAGATTTGTCTCTGCATTATACTGATCAAGGATTTTCCATTGAGTTTTTCTTGTCGTTAATGTCAAGAACTTTGTCTTGCCTTCCCAGTTTCTCTTGCTCGGTGCAGTGCCGTTCCCCAAAGACGTGCCGAGGTTGAAGGAGCTCGGTGTCGGCGGTGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCGTTGTATTATGTGAGTTTTGCTTCTTTGTTTGCAGTTGTTCATGTGTATTTTCTTGTTCTTAGAACTTGAAATATTGTGTTGCCTGATTAGATTGAAGAGAGACGAGTTTTCTTGTTTCGAATAACCATTTGAGGCATGAAAGTTGTACTAATTGCCTGACTTTTGAACGTTCTGCAGCGCTATGGAATCGATCATTTAAAGATCCCGACGAGAGATTATTGTTTTGCTCCGAAATTTTCGGATATCAGTCGAGCTGTGGACTTCATTCACAGTGAGTTATTTTCGTAGCTGTAATGTTTTGTAGTGTCGTTTCTTCCCCTGTTTCTTACAATATGTGTGCTATGATTTAACACGTTTTTGTTCTGTCTTCAGGAAACGCGTTGTGTGGTAAAACGACGTACGTCCACTGTAAAGCGGGGCGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTAATATCATGTACTACCCTTCTATGTCGAAATTCTGTACTGTAGTGAGACGTGTGAAAAGAAATCCTCGTTTATGATATTTTTTATCCAGAATTTTGATGTGAGATCCTACATCGGTTGGAGAGGGAACGAAACATTTTTATAAGGGTGTGGAAACCTCTCCCTAGCCGCGTTTTAAAAACCTTGGGGGAAGCCCGAAAGGGAAAACCCAGGAGGGAAACTAAAGGGTGTGGAAACCTCTCTAGCAACGTTTTAAAAACTTGGAAGGGAAGCCCGAAAGGGAAAGCCCAAGAGAGGGGAACAAAAGGGTGTGGAAACCTCTCCCTGGCAAACGCGTTTTAAAAACCTTGAGGGGAAGCTCGAAATGGAAAGCCCCGGATTGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTCCCTAGCAGATGCATTTTAAAAACTTTGAGGGGAAGCCTAGGACTGGGGAACGAAACCTTCTTTATAAGGGTGTGGAAGCCTCTTCCTAGCAGACCGTTTTAAAAACTTTGAGGGAAAGCCCGAAAGAGAGCCTAGGAGAGGGGAACGCAACATTCTTTATATGGGTGTGGAAATCTCTCTCCCTAATGGAAGCATTTTAAAAACCTCCAAGGACAATATCTGCTAGCGACTCTAGTTCTGGTCAATCGTGTGGACTTGGGCGGTTACATTTAAACTAACACAAAACAACAACGAGATTATGTTGATTCTCTTTGTTTGTTGTTCAGGTCAAATATAAGCACATGACCCCATCTGCTGCGCTAGAATACGTGCGCTCGAGAAGACCACGGGTGTTGCTCGCCCCCTCACAGTGGGAGGTAAAAGAAATTACTCCTTAAACTTGGAAGTCTTTTAGATCAGAAGCTTGTGGAAATCAGATAGTTTCATCCTTATGTGTTATATAACACACAGGCTGTTCAAGAATACAGCAACCGTCGACCCGTTGCAAGTTCTAGCCCTCCCTCAGGAGGAGATGCAGTCCTGATTACGAAAGACGATCTAGAAGGATATCACGGTACGTGCATCGACAGTGCAGGTAGAGAACTTGCAGTTGGCCCTTGGATGGGTAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCGTCGTTGATAGTTCATGGCAGCAGTGGATCTCTCATGAAGCGTCTGCCAGTGTCGGAGGCTCGAGCTTGTTGACGAACGACTTATGACCATAGCACACGCCTTGTTATGGAAGTAAGAATCGAACTCTTAAGGCTCAAACAGAGTCGTCGTTCTGAAGTTGGTAGTAGAACACCACCAAATAGTGACACTACTAGGTTGTACATATCTGCTACATCAAAATTTTCACTTCCCTTAGAATCATCTTCTCAATAAATTTAGCTCGTTGGCTTTGGAGTCGAAAGGGTAACGAGGATAACGAAGTTACTTGAACAGGATCTGTTCTATATGTCATGTCCTTAGCTGGTTGCTGGGAGCTGGAACATGCAGCCATGTAAACACATGATATCGATTTCCATTTGAAACTTATGCCACAAGTTGAATTAGAGGCGGGTTTGTATAGTTCG TTTTTAGAGAAGGAGGTGTAGAAATATCTTAATCGCTAAGATTGAGTTAAAATAATTTATTAGTTTCAATCTAGAATGTACATGAGCTAGAATTTGGAATCGATTCTGACTTGAATTTTTGGGTGTGTGCGGATAAATGCTTGATCCTCAATTGATTATTCAGTTTCCATATAAATTCGAATTCTGCGGATGATTCCATTTCTTAGTAGAGAGATTCTCTCACTCTCCGTTTCTCTAAATTGATCCATTCCTTAACATGCGGTGTTTCGTTTCTATTTCTTTCGCTTTCCGATCGATACCTCTTTTCCTTCGATCTTCCAATACTTCCGATTCTCACCCATTCATGTAATTTTCGTATTATCCCTCATTTTTACTGAAATTCCGATTTGATTTTACCCCTAATTCCGTGGAAATCGGGTTTCGATTTGATCATCTGGGTATTAAATTTTGTTCTGGGGTTTCGATTTGTTCATCTGGATATTAGAATTTTCTTCTGGTGTTCTTGCGATGAAGATCGTGGAATTGGAAGATGCTGGGAATGATCGGGAAAATGGAATGGGTAGCGATCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTCTTTTACCCTACTCTTTTGTATAACGTTCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGATGAAATCGATCAGTTTCTCTTGCTCGGTGCAGTGCCGTTCCCCAAAGACGTGCCGAGGTTGAAGGAGCTCGGTGTCGGCGGTGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCGTTGTATTATGTGAGTTTTGCTTCTTTGTTTGCAGTTGTTCATCGCTATGGAATCGATCATTTAAAGATCCCGACGAGAGATTATTGTTTTGCTCCGAAATTTTCGGATATCAGTCGAGCTGTGGACTTCATTCACAGAAACGCGTTGTGTGGTAAAACGACGTACGTCCACTGTAAAGCGGGGCGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCGCTAGAATACGTGCGCTCGAGAAGACCACGGGTGTTGCTCGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTCGACCCGTTGCAAGTTCTAGCCCTCCCTCAGGAGGAGATGCAGTCCTGATTACGAAAGACGATCTAGAAGGATATCACGGTACGTGCATCGACAGTGCAGGTAGAGAACTTGCAGTTGGCCCTTGGATGGGTAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCGTCGTTGATAGTTCATGGCAGCAGTGGATCTCTCATGAAGCGTCTGCCAGTGTCGGAGGCTCGAGCTTGTTGACGAACGACTTATGACCATAGCACACGCCTTGTTATGGAAGTAAGAATCGAACTCTTAAGGCTCAAACAGAGTCGTCGTTCTGAAGTTGGTAGTAGAACACCACCAAATAGTGACACTACTAGGTTGTACATATCTGCTACATCAAAATTTTCACTTCCCTTAGAATCATCTTCTCAATAAATTTAGCTCGTTGGCTTTGGAGTCGAAAGGGTAACGAGGATAACGAAGTTACTTGAACAGGATCTGTTCTATATGTCATGTCCTTAGCTGGTTGCTGGGAGCTGGAACATGCAGCCATGTAAACACATGATATCGATTTCCATTTGAAACTTATGCCACAAGTTGAATTAGAGGCGGGTTTGTATAGTTCG ATGAAGATCGTGGAATTGGAAGATGCTGGGAATGATCGGGAAAATGGAATGGGTAGCGATCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTCTTTTACCCTACTCTTTTGTATAACGTTCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGATGAAATCGATCAGTTTCTCTTGCTCGGTGCAGTGCCGTTCCCCAAAGACGTGCCGAGGTTGAAGGAGCTCGGTGTCGGCGGTGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCGTTGTATTATGTGAGTTTTGCTTCTTTGTTTGCAGTTGTTCATCGCTATGGAATCGATCATTTAAAGATCCCGACGAGAGATTATTGTTTTGCTCCGAAATTTTCGGATATCAGTCGAGCTGTGGACTTCATTCACAGAAACGCGTTGTGTGGTAAAACGACGTACGTCCACTGTAAAGCGGGGCGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCGCTAGAATACGTGCGCTCGAGAAGACCACGGGTGTTGCTCGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTCGACCCGTTGCAAGTTCTAGCCCTCCCTCAGGAGGAGATGCAGTCCTGATTACGAAAGACGATCTAGAAGGATATCACGGTACGTGCATCGACAGTGCAGGTAGAGAACTTGCAGTTGGCCCTTGGATGGGTAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCGTCGTTGATAGTTCATGGCAGCAGTGGATCTCTCATGAAGCGTCTGCCAGTGTCGGAGGCTCGAGCTTGTTGA MKIVELEDAGNDRENGMGSDQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEIDQFLLLGAVPFPKDVPRLKELGVGGVITLNEPYETLVPSSLYYVSFASLFAVVHRYGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNALCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSNRRPVASSSPPSGGDAVLITKDDLEGYHGTCIDSAGRELAVGPWMGKSKPMIARLSCLFSSLIVHGSSGSLMKRLPVSEARAC Homology
BLAST of Carg10824 vs. NCBI nr
Match: KAG7030468.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 603.2 bits (1554), Expect = 1.2e-168 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of Carg10824 vs. NCBI nr
Match: XP_022946630.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita moschata] >KAG6599492.1 putative dual specificity protein phosphatase DSP8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 575.1 bits (1481), Expect = 3.5e-160 Identity = 284/295 (96.27%), Postives = 284/295 (96.27%), Query Frame = 0
BLAST of Carg10824 vs. NCBI nr
Match: XP_023547253.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita pepo subsp. pepo] >XP_023547270.1 putative dual specificity protein phosphatase DSP8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 574.3 bits (1479), Expect = 5.9e-160 Identity = 283/295 (95.93%), Postives = 284/295 (96.27%), Query Frame = 0
BLAST of Carg10824 vs. NCBI nr
Match: XP_022999518.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita maxima]) HSP 1 Score: 568.5 bits (1464), Expect = 3.3e-158 Identity = 281/295 (95.25%), Postives = 282/295 (95.59%), Query Frame = 0
BLAST of Carg10824 vs. NCBI nr
Match: XP_023521512.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551.2 bits (1419), Expect = 5.4e-153 Identity = 275/295 (93.22%), Postives = 277/295 (93.90%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy Swiss-Prot
Match: Q9ZQP1 (Phosphatidylglycerophosphate phosphatase PTPMT1 OS=Arabidopsis thaliana OX=3702 GN=PTPMT1 PE=1 SV=2) HSP 1 Score: 279.3 bits (713), Expect = 5.2e-74 Identity = 144/242 (59.50%), Postives = 168/242 (69.42%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy Swiss-Prot
Match: Q6NKR2 (Phosphatidylglycerophosphate phosphatase PTPMT2 OS=Arabidopsis thaliana OX=3702 GN=PTPMT2 PE=1 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.1e-71 Identity = 134/205 (65.37%), Postives = 162/205 (79.02%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy Swiss-Prot
Match: Q66GT5 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Mus musculus OX=10090 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 7.6e-25 Identity = 68/189 (35.98%), Postives = 101/189 (53.44%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy Swiss-Prot
Match: P0C089 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24 Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy Swiss-Prot
Match: Q86BN8 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Drosophila melanogaster OX=7227 GN=PTPMT1 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.2e-24 Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy TrEMBL
Match: A0A6J1G4F5 (putative dual specificity protein phosphatase DSP8 OS=Cucurbita moschata OX=3662 GN=LOC111450637 PE=3 SV=1) HSP 1 Score: 575.1 bits (1481), Expect = 1.7e-160 Identity = 284/295 (96.27%), Postives = 284/295 (96.27%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy TrEMBL
Match: A0A6J1KJX2 (putative dual specificity protein phosphatase DSP8 OS=Cucurbita maxima OX=3661 GN=LOC111493853 PE=3 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 1.6e-158 Identity = 281/295 (95.25%), Postives = 282/295 (95.59%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy TrEMBL
Match: A0A5D3CKK3 (Putative dual specificity protein phosphatase DSP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00720 PE=3 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 6.7e-149 Identity = 268/296 (90.54%), Postives = 275/296 (92.91%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy TrEMBL
Match: A0A1S3CAJ4 (putative dual specificity protein phosphatase DSP8 OS=Cucumis melo OX=3656 GN=LOC103498285 PE=3 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 4.3e-148 Identity = 267/296 (90.20%), Postives = 274/296 (92.57%), Query Frame = 0
BLAST of Carg10824 vs. ExPASy TrEMBL
Match: A0A0A0LIP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000700 PE=3 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 6.9e-146 Identity = 262/296 (88.51%), Postives = 273/296 (92.23%), Query Frame = 0
BLAST of Carg10824 vs. TAIR 10
Match: AT2G35680.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 279.3 bits (713), Expect = 3.7e-75 Identity = 144/242 (59.50%), Postives = 168/242 (69.42%), Query Frame = 0
BLAST of Carg10824 vs. TAIR 10
Match: AT5G56610.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-72 Identity = 134/205 (65.37%), Postives = 162/205 (79.02%), Query Frame = 0
BLAST of Carg10824 vs. TAIR 10
Match: AT5G56610.2 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 181.0 bits (458), Expect = 1.4e-45 Identity = 98/205 (47.80%), Postives = 123/205 (60.00%), Query Frame = 0
BLAST of Carg10824 vs. TAIR 10
Match: AT3G23610.1 (dual specificity protein phosphatase 1 ) HSP 1 Score: 52.4 bits (124), Expect = 7.3e-07 Identity = 41/134 (30.60%), Postives = 59/134 (44.03%), Query Frame = 0
BLAST of Carg10824 vs. TAIR 10
Match: AT3G23610.2 (dual specificity protein phosphatase 1 ) HSP 1 Score: 52.4 bits (124), Expect = 7.3e-07 Identity = 41/134 (30.60%), Postives = 59/134 (44.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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