Carg10721 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCTTCTTCTTCTTCTTCTCGTCTGCGTTTTTTTTCTCTTTTTTCTTCTCTCTCCTTGTTGTCACTGCTCAAGTTCGCGAAGTCGTCATGTCGATTGCTTTGGATAGGGTTCAGCGGGTTGAGGATAAAGGCTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCGGTGTTTGAGAGGTTGGATACTGGGGATGTGGATCACGGTGTTGAAGGCTTTGAAAAGGAGGCTGAGGAGTCCAATACTTGCAGCTCGGCTTCCAGTTCTTCTTCTTCGATCGGGAGGAACAGTGATCAGTCCGCCAGATCGTCGGACGGTGAGGAGAGTGGCGAGAGTGATGAGGTTCAGAGCTCGTTTAAGGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTACCTGTCAGGTTGGTGTTCTTTCTGCTTAAGCATCTTGTTTCTCCTTTGTTTTGGATTTTACAAACTCTTTACTTTCTTGCTGGAATCTTTGTTTGGAAATTAGAAATCGAAATCATTCCTTGTCTCTAGTTCTTGAATTTGAGGGATGATCTGGAACGAGTGTGTTAAACCTATGGTTGGTGAAGCTGAAATGTTTAGAGGAGGCCTGATTGAGCTTGAAAATTTAATACTCCTGCAGTACATTGCATTTGGGAATGTGGATTGTTAATCTGTCCTTCAGAACGATGGAGTGATTCGATCTATGCTTGATCAATTAATTTTGCTTCATTTTGGACTTACTATTAGGGAATTATGATTTCAAGCTGGCGGTGACTAGTATTTATTGCTGACAAACAGATAAAAGACTTGCGCTACTAAAAGTAGTCATTATTCTTGGCATGAATAAGACACGGCCTGTAGAAATTTATTGTATTCTTTAATATAGGTGAATGTGATAACAAATATGAGAAAAAAGAGCATTCTGAAGCCGAGGATTAGCAAATGACATGATTTCTTTAATACTCCTTAATCATGTGTTTACCGTCGAATTTTTTTTATCATCTGTTTTGCCAATCTCTATAGTGGAGAGTGTGTTTCTGATCTTCTTGAGCTCAAATCAGAAAGAAATGATTGCTTTGCTGTGCATAAAAGTTGTTCTGCCTGCAAAACAATGGGGCTTTGATTTAAGCATAAAATCTAGGAAACACAATTTCTACCGTTGATTGAATCCTTTATACATTGAGGTTTTCATGCAATTATCCATTAGAACACGCACAGCCATTCTATTTGTTCCTTGATCTAATACAAAATCATTACTACATGCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCAAAGTCTTACACAAGTCTGGCTGATGCCTCTGTTTCCTCCATGAAGGAGATTGCAAAGCCGGAGAATGCCTATTCCAAGAAACGAAGGAATCTCATGGCTTACAATCTTGTGTGGGAGAAGAACCGGAGTTTCCCCCTCAAGAATAACGGTGGTGGGATATCAAAAAGACCCATCAGCTCAAGCAGAAGCTCCCTGGCTTTGGCTGTTGCTATGAGCAGTTCCGAAAGTAACTGCAGTGAGGATTCAAACTCCAGCTCATATTCAGGCTCTCCACCGCCTCTCCCACCTCTGCACCCACAATCTAGAGCATCTAACTGCAATCTGGCTTCCATGGTGCCACCTCAACGAAATTTCTCCACCTGGCGTTCATATTCCTTGGCTGATTTACAAGAGTGCGCCACCTCGGCTAATAAGGCCAATCTAACAAATCTCAACTGA TTCTTCTTCTTCTTCTTCTTCTTCTCGTCTGCGTTTTTTTTCTCTTTTTTCTTCTCTCTCCTTGTTGTCACTGCTCAAGTTCGCGAAGTCGTCATGTCGATTGCTTTGGATAGGGTTCAGCGGGTTGAGGATAAAGGCTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCGGTGTTTGAGAGGTTGGATACTGGGGATGTGGATCACGGTGTTGAAGGCTTTGAAAAGGAGGCTGAGGAGTCCAATACTTGCAGCTCGGCTTCCAGTTCTTCTTCTTCGATCGGGAGGAACAGTGATCAGTCCGCCAGATCGTCGGACGGTGAGGAGAGTGGCGAGAGTGATGAGGTTCAGAGCTCGTTTAAGGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTACCTGTCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCAAAGTCTTACACAAGTCTGGCTGATGCCTCTGTTTCCTCCATGAAGGAGATTGCAAAGCCGGAGAATGCCTATTCCAAGAAACGAAGGAATCTCATGGCTTACAATCTTGTGTGGGAGAAGAACCGGAGTTTCCCCCTCAAGAATAACGGTGGTGGGATATCAAAAAGACCCATCAGCTCAAGCAGAAGCTCCCTGGCTTTGGCTGTTGCTATGAGCAGTTCCGAAAGTAACTGCAGTGAGGATTCAAACTCCAGCTCATATTCAGGCTCTCCACCGCCTCTCCCACCTCTGCACCCACAATCTAGAGCATCTAACTGCAATCTGGCTTCCATGGTGCCACCTCAACGAAATTTCTCCACCTGGCGTTCATATTCCTTGGCTGATTTACAAGAGTGCGCCACCTCGGCTAATAAGGCCAATCTAACAAATCTCAACTGA TTCTTCTTCTTCTTCTTCTTCTTCTCGTCTGCGTTTTTTTTCTCTTTTTTCTTCTCTCTCCTTGTTGTCACTGCTCAAGTTCGCGAAGTCGTCATGTCGATTGCTTTGGATAGGGTTCAGCGGGTTGAGGATAAAGGCTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCGGTGTTTGAGAGGTTGGATACTGGGGATGTGGATCACGGTGTTGAAGGCTTTGAAAAGGAGGCTGAGGAGTCCAATACTTGCAGCTCGGCTTCCAGTTCTTCTTCTTCGATCGGGAGGAACAGTGATCAGTCCGCCAGATCGTCGGACGGTGAGGAGAGTGGCGAGAGTGATGAGGTTCAGAGCTCGTTTAAGGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTACCTGTCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCAAAGTCTTACACAAGTCTGGCTGATGCCTCTGTTTCCTCCATGAAGGAGATTGCAAAGCCGGAGAATGCCTATTCCAAGAAACGAAGGAATCTCATGGCTTACAATCTTGTGTGGGAGAAGAACCGGAGTTTCCCCCTCAAGAATAACGGTGGTGGGATATCAAAAAGACCCATCAGCTCAAGCAGAAGCTCCCTGGCTTTGGCTGTTGCTATGAGCAGTTCCGAAAGTAACTGCAGTGAGGATTCAAACTCCAGCTCATATTCAGGCTCTCCACCGCCTCTCCCACCTCTGCACCCACAATCTAGAGCATCTAACTGCAATCTGGCTTCCATGGTGCCACCTCAACGAAATTTCTCCACCTGGCGTTCATATTCCTTGGCTGATTTACAAGAGTGCGCCACCTCGGCTAATAAGGCCAATCTAACAAATCTCAACTGA FFFFFFFFSSAFFFSFFFSLLVVTAQVREVVMSIALDRVQRVEDKGSGFSPEDLGYGSVFERLDTGDVDHGVEGFEKEAEESNTCSSASSSSSSIGRNSDQSARSSDGEESGESDEVQSSFKGPLDMMDSLEEVLPVRKGISKFYNGKSKSYTSLADASVSSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPISSSRSSLALAVAMSSSESNCSEDSNSSSYSGSPPPLPPLHPQSRASNCNLASMVPPQRNFSTWRSYSLADLQECATSANKANLTNLN Homology
BLAST of Carg10721 vs. NCBI nr
Match: KAG7037686.1 (hypothetical protein SDJN02_01316, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 530.8 bits (1366), Expect = 7.5e-147 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of Carg10721 vs. NCBI nr
Match: XP_022941285.1 (uncharacterized protein LOC111446629 [Cucurbita moschata]) HSP 1 Score: 489.2 bits (1258), Expect = 2.5e-134 Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of Carg10721 vs. NCBI nr
Match: XP_023524341.1 (uncharacterized protein LOC111788264 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 483.0 bits (1242), Expect = 1.8e-132 Identity = 258/263 (98.10%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of Carg10721 vs. NCBI nr
Match: XP_022982399.1 (uncharacterized protein LOC111481236 [Cucurbita maxima]) HSP 1 Score: 481.9 bits (1239), Expect = 4.0e-132 Identity = 258/263 (98.10%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of Carg10721 vs. NCBI nr
Match: KAG6608335.1 (hypothetical protein SDJN03_01677, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 450.3 bits (1157), Expect = 1.3e-122 Identity = 248/263 (94.30%), Postives = 249/263 (94.68%), Query Frame = 0
BLAST of Carg10721 vs. ExPASy TrEMBL
Match: A0A6J1FT55 (uncharacterized protein LOC111446629 OS=Cucurbita moschata OX=3662 GN=LOC111446629 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 1.2e-134 Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of Carg10721 vs. ExPASy TrEMBL
Match: A0A6J1J4F7 (uncharacterized protein LOC111481236 OS=Cucurbita maxima OX=3661 GN=LOC111481236 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.9e-132 Identity = 258/263 (98.10%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of Carg10721 vs. ExPASy TrEMBL
Match: A0A6J1FCW4 (uncharacterized protein LOC111442964 OS=Cucurbita moschata OX=3662 GN=LOC111442964 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 1.3e-115 Identity = 237/265 (89.43%), Postives = 250/265 (94.34%), Query Frame = 0
BLAST of Carg10721 vs. ExPASy TrEMBL
Match: A0A6J1IQH5 (uncharacterized protein LOC111477263 OS=Cucurbita maxima OX=3661 GN=LOC111477263 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 5.9e-113 Identity = 234/265 (88.30%), Postives = 250/265 (94.34%), Query Frame = 0
BLAST of Carg10721 vs. ExPASy TrEMBL
Match: A0A5A7VFR8 (Vitellogenin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001690 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 4.3e-108 Identity = 227/267 (85.02%), Postives = 242/267 (90.64%), Query Frame = 0
BLAST of Carg10721 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 148.7 bits (374), Expect = 7.5e-36 Identity = 113/236 (47.88%), Postives = 152/236 (64.41%), Query Frame = 0
BLAST of Carg10721 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 1.8e-21 Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 0
BLAST of Carg10721 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 5.1e-08 Identity = 46/125 (36.80%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Carg10721 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07 Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 0
BLAST of Carg10721 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 42.7 bits (99), Expect = 5.8e-04 Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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