Homology
BLAST of Carg10660 vs. NCBI nr
Match:
KAG7037746.1 (RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 509.2 bits (1310), Expect = 2.0e-140
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
Query: 1 MFSSTIVGKETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVT 60
MFSSTIVGKETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVT
Sbjct: 1 MFSSTIVGKETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVT 60
Query: 61 DVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI 120
DVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI
Sbjct: 61 DVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI 120
Query: 121 SKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPA 180
SKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPA
Sbjct: 121 SKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPA 180
Query: 181 AWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAV 240
AWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAV
Sbjct: 181 AWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAV 240
Query: 241 PFHAKDKA 249
PFHAKDKA
Sbjct: 241 PFHAKDKA 248
BLAST of Carg10660 vs. NCBI nr
Match:
XP_022982410.1 (RNA-binding protein 1-like [Cucurbita maxima])
HSP 1 Score: 468.0 bits (1203), Expect = 5.0e-128
Identity = 224/229 (97.82%), Postives = 228/229 (99.56%), Query Frame = 0
Query: 20 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFI 79
MSNGTRMEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFI
Sbjct: 1 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFI 60
Query: 80 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 139
TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC
Sbjct: 61 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 120
Query: 140 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSL 199
GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWY PNFFGMFPPPHK+SL
Sbjct: 121 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYGPNFFGMFPPPHKNSL 180
Query: 200 VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 249
VYPTYSSNGLSTPVAGYETADARRKV+PPTRAQKNMSADAVPFHAKD+A
Sbjct: 181 VYPTYSSNGLSTPVAGYETADARRKVEPPTRAQKNMSADAVPFHAKDRA 229
BLAST of Carg10660 vs. NCBI nr
Match:
XP_023524364.1 (RNA-binding protein 1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 467.6 bits (1202), Expect = 6.6e-128
Identity = 224/229 (97.82%), Postives = 228/229 (99.56%), Query Frame = 0
Query: 20 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFI 79
MSNGTRMEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFI
Sbjct: 1 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFI 60
Query: 80 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 139
TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC
Sbjct: 61 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 120
Query: 140 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSL 199
GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SL
Sbjct: 121 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSL 180
Query: 200 VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 249
VYPTYSSNGLSTPVAGYETAD RRKV+PP+RAQKNMSADAVPFHAKDKA
Sbjct: 181 VYPTYSSNGLSTPVAGYETADGRRKVEPPSRAQKNMSADAVPFHAKDKA 229
BLAST of Carg10660 vs. NCBI nr
Match:
XP_022940975.1 (RNA-binding protein 1-like [Cucurbita moschata])
HSP 1 Score: 467.2 bits (1201), Expect = 8.6e-128
Identity = 225/229 (98.25%), Postives = 227/229 (99.13%), Query Frame = 0
Query: 20 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFI 79
M NGT MEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFI
Sbjct: 1 MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFI 60
Query: 80 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 139
TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC
Sbjct: 61 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 120
Query: 140 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSL 199
GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SL
Sbjct: 121 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSL 180
Query: 200 VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 249
VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
Sbjct: 181 VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 229
BLAST of Carg10660 vs. NCBI nr
Match:
KAG6608405.1 (RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 416.4 bits (1069), Expect = 1.7e-112
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query: 50 KSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI 109
KSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI
Sbjct: 4 KSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI 63
Query: 110 PKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWF 169
PKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWF
Sbjct: 64 PKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWF 123
Query: 170 SPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPT 229
SPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPT
Sbjct: 124 SPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPT 183
Query: 230 RAQKNMSADAVPFHAKDKA 249
RAQKNMSADAVPFHAKDKA
Sbjct: 184 RAQKNMSADAVPFHAKDKA 202
BLAST of Carg10660 vs. ExPASy Swiss-Prot
Match:
Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 2.5e-29
Identity = 91/213 (42.72%), Postives = 119/213 (55.87%), Query Frame = 0
Query: 18 QRMSNGTRMEDQ----FRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRP 77
Q+M+ G R R +KIFVGGLS+ TE++FKSYFE+FGR TDVVVM D VT RP
Sbjct: 101 QQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRP 160
Query: 78 RGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG--NYNGGHISKSPLSESNVL 137
RGFGF+T+DS SV+ V+Q+NFHEL+ +RVEVKRAIPK+G + NG ++ P S
Sbjct: 161 RGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQA 220
Query: 138 PSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGM 197
Y GY + F P P +G + PYG F+ ++ P F
Sbjct: 221 TPYVPEQNGYGMVLQFPP-PVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYC 280
Query: 198 FP----PPHKDSLVYPTYSSNGL---STPVAGY 217
P PP ++L Y Y NG T ++GY
Sbjct: 281 APPHPTPPPTNNLGYIQY-MNGFDLSGTNISGY 311
BLAST of Carg10660 vs. ExPASy Swiss-Prot
Match:
Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 4.1e-24
Identity = 64/140 (45.71%), Postives = 80/140 (57.14%), Query Frame = 0
Query: 33 RKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQ 92
+KIFVGGL LT+++F+ YFE +G VTDV +M D T RPRGFGF++FDS +VDSVL
Sbjct: 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 169
Query: 93 NNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPG------ 152
FH+L+G++VEVKRA+PK N GG S Y Y + Y G
Sbjct: 170 KTFHDLSGKQVEVKRALPKDANPGGGGRSMGGGGSG----GYQGYGGNESSYDGRMDSNR 229
Query: 153 FTPFPPYGPGFGLYGSDPYG 167
F G G YGS YG
Sbjct: 230 FLQHQSVGNGLPSYGSSGYG 245
BLAST of Carg10660 vs. ExPASy Swiss-Prot
Match:
Q9JII5 (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)
HSP 1 Score: 96.7 bits (239), Expect = 4.0e-19
Identity = 66/173 (38.15%), Postives = 87/173 (50.29%), Query Frame = 0
Query: 28 DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSV 87
D + KIFVGG+ E + + YF+KFG VT+VV++ D+ +RPRGFGFITF+ QSV
Sbjct: 108 DSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167
Query: 88 DSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGY---TVY 147
D + +FH++ G++VEVKRA P+ + S V PS G T
Sbjct: 168 DQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQ 227
Query: 148 PGFTP---FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPP 195
G+ P + P G G YG P G P P S P G FPPP
Sbjct: 228 QGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPP---GGFPPP 277
BLAST of Carg10660 vs. ExPASy Swiss-Prot
Match:
Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 65/173 (37.57%), Postives = 88/173 (50.87%), Query Frame = 0
Query: 28 DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSV 87
D + KIFVGG+ E + + YF+KFG VT+VV++ D+ +RPRGFGFITF+ QSV
Sbjct: 108 DNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167
Query: 88 DSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGY---TVY 147
D + +FH++ G++VEVKRA P+ + S V+P+ G T
Sbjct: 168 DQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQ 227
Query: 148 PGFTP---FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPP 195
G+ P + P G G YG P G P P S P G FPPP
Sbjct: 228 QGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPP---GGFPPP 277
BLAST of Carg10660 vs. ExPASy Swiss-Prot
Match:
P22626 (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens OX=9606 GN=HNRNPA2B1 PE=1 SV=2)
HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 51/117 (43.59%), Postives = 77/117 (65.81%), Query Frame = 0
Query: 10 ETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSV 69
ETV L R++ R ++QF RK+F+GGLS E TE+ ++Y+E++G++TD VVMRD
Sbjct: 6 ETVPLERKK------REKEQF--RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPA 65
Query: 70 TKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPK-KGNYNGGHISKSPL 126
+KR RGFGF+TF S+ VD+ + H ++GR VE KRA+ + + G H++ L
Sbjct: 66 SKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKL 114
BLAST of Carg10660 vs. ExPASy TrEMBL
Match:
A0A6J1J2K5 (RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1)
HSP 1 Score: 468.0 bits (1203), Expect = 2.4e-128
Identity = 224/229 (97.82%), Postives = 228/229 (99.56%), Query Frame = 0
Query: 20 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFI 79
MSNGTRMEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFI
Sbjct: 1 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFI 60
Query: 80 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 139
TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC
Sbjct: 61 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 120
Query: 140 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSL 199
GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWY PNFFGMFPPPHK+SL
Sbjct: 121 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYGPNFFGMFPPPHKNSL 180
Query: 200 VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 249
VYPTYSSNGLSTPVAGYETADARRKV+PPTRAQKNMSADAVPFHAKD+A
Sbjct: 181 VYPTYSSNGLSTPVAGYETADARRKVEPPTRAQKNMSADAVPFHAKDRA 229
BLAST of Carg10660 vs. ExPASy TrEMBL
Match:
A0A6J1FS87 (RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV=1)
HSP 1 Score: 467.2 bits (1201), Expect = 4.2e-128
Identity = 225/229 (98.25%), Postives = 227/229 (99.13%), Query Frame = 0
Query: 20 MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFI 79
M NGT MEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFI
Sbjct: 1 MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFI 60
Query: 80 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 139
TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC
Sbjct: 61 TFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSC 120
Query: 140 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSL 199
GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SL
Sbjct: 121 GYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSL 180
Query: 200 VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 249
VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
Sbjct: 181 VYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 229
BLAST of Carg10660 vs. ExPASy TrEMBL
Match:
A0A0A0L563 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV=1)
HSP 1 Score: 250.4 bits (638), Expect = 8.0e-63
Identity = 139/241 (57.68%), Postives = 166/241 (68.88%), Query Frame = 0
Query: 24 TRME---DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFIT 83
TRM+ DQ RGRKIFVGGLSAELTE++F+SYFE FG++TDVVVM DSVT RPRGFGF+T
Sbjct: 4 TRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVT 63
Query: 84 FDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI-----SKSPL--SESNVLPS 143
F+S++SVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG HI +KSPL NV
Sbjct: 64 FESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPLLNGNRNVPFP 123
Query: 144 YPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFF--GMF 203
YPYY GY +YPGFT FP YG YGS+ YGNWF P +AS W+ PNFF GM
Sbjct: 124 YPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSANIASDGWWHGPNFFSVGML 183
Query: 204 PPPHKDSLVYPTY-----SSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKD 248
PP ++SL++P+ S NG++ G ++ T ++ MSADA PF KD
Sbjct: 184 PPLCRNSLMHPSKGIYIGSRNGMANTRNG--------EIKQNTAGKRIMSADAAPFQIKD 236
BLAST of Carg10660 vs. ExPASy TrEMBL
Match:
A0A6J1C724 (RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 SV=1)
HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 133/243 (54.73%), Postives = 164/243 (67.49%), Query Frame = 0
Query: 22 NGTRME---DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGF 81
+ RME DQ RG+KIFVGGL ++LTE++FKSYFEKFG++TDVVVM+DSVT RPRGFGF
Sbjct: 4 SSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGF 63
Query: 82 ITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPLSESNVLPSYPY 141
ITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK N N + KSPLS +V YP+
Sbjct: 64 ITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLS-PHVPLYYPH 123
Query: 142 YSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFF- 201
+S G VYPG+ PFP Y YGS YG+W ++ +G P+ +AWYAPN F
Sbjct: 124 FSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFG 183
Query: 202 -GMFPPPHKDSLVYPTYSSNG--LSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAK 249
GMFP P+ +S+++P YSS G L P+AG R NMSADAVPF
Sbjct: 184 DGMFPSPYINSVIHPVYSSKGGRLLDPMAG------------NGRRNGNMSADAVPFQLN 227
BLAST of Carg10660 vs. ExPASy TrEMBL
Match:
A0A5N6R9D7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 1.3e-41
Identity = 102/209 (48.80%), Postives = 132/209 (63.16%), Query Frame = 0
Query: 14 LAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRP 73
L++ NG ++QFR +KIFVGGLSA LTE++FK+YF++FGRVTDVVVM DS T RP
Sbjct: 101 LSKSSSTDNG---DNQFRTKKIFVGGLSASLTEEEFKNYFKRFGRVTDVVVMHDSTTHRP 160
Query: 74 RGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLP- 133
RGFGFITFDS +SV++V+QN+FHELNGR VEVKRA+PK+ N + + P
Sbjct: 161 RGFGFITFDSEESVENVMQNSFHELNGRLVEVKRAVPKEVNNGSDSGFNTRIEGGRGSPG 220
Query: 134 SYPYYSCGYTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFG---------PMASPAAW 193
S+P YS Y + PG+ PFP + G G LYG+ Y W+ PS G P+A W
Sbjct: 221 SFPPYSLRYWILPGYVPFPGFSGGGGSLYGASMYSGWY-PSGGSGGVGSVVAPLAPRNPW 280
Query: 194 YAPNFF--GMFPPPHKDSLVYPTYSSNGL 210
Y P G FP P + +YP Y + G+
Sbjct: 281 YGPRVIGAGAFPLPPGSASIYPAYFTGGV 305
BLAST of Carg10660 vs. TAIR 10
Match:
AT1G58470.1 (RNA-binding protein 1 )
HSP 1 Score: 130.6 bits (327), Expect = 1.8e-30
Identity = 91/213 (42.72%), Postives = 119/213 (55.87%), Query Frame = 0
Query: 18 QRMSNGTRMEDQ----FRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRP 77
Q+M+ G R R +KIFVGGLS+ TE++FKSYFE+FGR TDVVVM D VT RP
Sbjct: 101 QQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRP 160
Query: 78 RGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG--NYNGGHISKSPLSESNVL 137
RGFGF+T+DS SV+ V+Q+NFHEL+ +RVEVKRAIPK+G + NG ++ P S
Sbjct: 161 RGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQA 220
Query: 138 PSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGM 197
Y GY + F P P +G + PYG F+ ++ P F
Sbjct: 221 TPYVPEQNGYGMVLQFPP-PVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYC 280
Query: 198 FP----PPHKDSLVYPTYSSNGL---STPVAGY 217
P PP ++L Y Y NG T ++GY
Sbjct: 281 APPHPTPPPTNNLGYIQY-MNGFDLSGTNISGY 311
BLAST of Carg10660 vs. TAIR 10
Match:
AT5G55550.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 122.9 bits (307), Expect = 3.7e-28
Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 0
Query: 31 RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSV 90
R +KIFVGGL + +TE++FK+YF++FG + DVVVM D T+RPRGFGFITFDS +VD V
Sbjct: 108 RTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV 167
Query: 91 LQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SNVLPSYPYYSCGYTVYPGFTP 150
L FHELNG+ VEVKRA+PK+ SP+S + L S Y G P +
Sbjct: 168 LHKTFHELNGKLVEVKRAVPKE---------ISPVSNIRSPLASGVNYGGGSNRMPANSY 227
Query: 151 FPPYGPGFGLYGS-DPYGNWFSPSFG 175
F + PG G Y S P G FSP G
Sbjct: 228 FNNFAPGPGFYNSLGPVGRRFSPVIG 244
BLAST of Carg10660 vs. TAIR 10
Match:
AT5G55550.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 122.9 bits (307), Expect = 3.7e-28
Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 0
Query: 31 RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSV 90
R +KIFVGGL + +TE++FK+YF++FG + DVVVM D T+RPRGFGFITFDS +VD V
Sbjct: 108 RTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV 167
Query: 91 LQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SNVLPSYPYYSCGYTVYPGFTP 150
L FHELNG+ VEVKRA+PK+ SP+S + L S Y G P +
Sbjct: 168 LHKTFHELNGKLVEVKRAVPKE---------ISPVSNIRSPLASGVNYGGGSNRMPANSY 227
Query: 151 FPPYGPGFGLYGS-DPYGNWFSPSFG 175
F + PG G Y S P G FSP G
Sbjct: 228 FNNFAPGPGFYNSLGPVGRRFSPVIG 244
BLAST of Carg10660 vs. TAIR 10
Match:
AT5G55550.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 122.9 bits (307), Expect = 3.7e-28
Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 0
Query: 31 RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSV 90
R +KIFVGGL + +TE++FK+YF++FG + DVVVM D T+RPRGFGFITFDS +VD V
Sbjct: 108 RTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV 167
Query: 91 LQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SNVLPSYPYYSCGYTVYPGFTP 150
L FHELNG+ VEVKRA+PK+ SP+S + L S Y G P +
Sbjct: 168 LHKTFHELNGKLVEVKRAVPKE---------ISPVSNIRSPLASGVNYGGGSNRMPANSY 227
Query: 151 FPPYGPGFGLYGS-DPYGNWFSPSFG 175
F + PG G Y S P G FSP G
Sbjct: 228 FNNFAPGPGFYNSLGPVGRRFSPVIG 244
BLAST of Carg10660 vs. TAIR 10
Match:
AT5G55550.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 122.9 bits (307), Expect = 3.7e-28
Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 0
Query: 31 RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSV 90
R +KIFVGGL + +TE++FK+YF++FG + DVVVM D T+RPRGFGFITFDS +VD V
Sbjct: 108 RTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV 167
Query: 91 LQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SNVLPSYPYYSCGYTVYPGFTP 150
L FHELNG+ VEVKRA+PK+ SP+S + L S Y G P +
Sbjct: 168 LHKTFHELNGKLVEVKRAVPKE---------ISPVSNIRSPLASGVNYGGGSNRMPANSY 227
Query: 151 FPPYGPGFGLYGS-DPYGNWFSPSFG 175
F + PG G Y S P G FSP G
Sbjct: 228 FNNFAPGPGFYNSLGPVGRRFSPVIG 244
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7037746.1 | 2.0e-140 | 100.00 | RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022982410.1 | 5.0e-128 | 97.82 | RNA-binding protein 1-like [Cucurbita maxima] | [more] |
XP_023524364.1 | 6.6e-128 | 97.82 | RNA-binding protein 1-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022940975.1 | 8.6e-128 | 98.25 | RNA-binding protein 1-like [Cucurbita moschata] | [more] |
KAG6608405.1 | 1.7e-112 | 100.00 | RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q9C652 | 2.5e-29 | 42.72 | RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1 | [more] |
Q8W034 | 4.1e-24 | 45.71 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... | [more] |
Q9JII5 | 4.0e-19 | 38.15 | DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2 | [more] |
Q96EP5 | 5.2e-19 | 37.57 | DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1 | [more] |
P22626 | 5.2e-19 | 43.59 | Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens OX=9606 GN=HNRNPA... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1J2K5 | 2.4e-128 | 97.82 | RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1 | [more] |
A0A6J1FS87 | 4.2e-128 | 98.25 | RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV... | [more] |
A0A0A0L563 | 8.0e-63 | 57.68 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV... | [more] |
A0A6J1C724 | 1.0e-54 | 54.73 | RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 S... | [more] |
A0A5N6R9D7 | 1.3e-41 | 48.80 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1 | [more] |