Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTTCGAGTTCGAGTTCTCATCCACTGGACTTTGATTTCGAACTCCTTCAAACGAGGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGGGTTCCGAAGCTACAATCGAGTTCCAGCCCTAACGTAAGCACGTTCGAGATATCAGCGTTGAAATTGCCTTCGCCGCCGTACCGATCGGAGAGTGCTAGGCTTCCCGATGACTACGGTGAGGCGATCCCCTGTTCTTCTCCGCGAGCGAAGAGTGCGAGGATGGCTAAGGAACATTTGTGGCTTCAAGCTTATTCCGACGACTTTGGATCGTCTTTTGGTTTCGGGTGCTGTAAACGGGATGGTTTGAAGGAGACAGATCCTTTTGTTGAAGCCTATAAGAAATGCACAAACGGCCCTTCGAAGAACCGTCGGCCAATCGGCGGCGGTTCTGCAACAAATGGAGTTAAACGTCCTGGTATTAGAAGAAGATTACTTTTTTCACTTTCACGGAAGTGCTGCGCTTCATCCCCGTGA
mRNA sequence
ATGGCGAGTTCGAGTTCGAGTTCTCATCCACTGGACTTTGATTTCGAACTCCTTCAAACGAGGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGGGTTCCGAAGCTACAATCGAGTTCCAGCCCTAACGTAAGCACGTTCGAGATATCAGCGTTGAAATTGCCTTCGCCGCCGTACCGATCGGAGAGTGCTAGGCTTCCCGATGACTACGGTGAGGCGATCCCCTGTTCTTCTCCGCGAGCGAAGAGTGCGAGGATGGCTAAGGAACATTTGTGGCTTCAAGCTTATTCCGACGACTTTGGATCGTCTTTTGGTTTCGGGTGCTGTAAACGGGATGGTTTGAAGGAGACAGATCCTTTTGTTGAAGCCTATAAGAAATGCACAAACGGCCCTTCGAAGAACCGTCGGCCAATCGGCGGCGGTTCTGCAACAAATGGAGTTAAACGTCCTGGTATTAGAAGAAGATTACTTTTTTCACTTTCACGGAAGTGCTGCGCTTCATCCCCGTGA
Coding sequence (CDS)
ATGGCGAGTTCGAGTTCGAGTTCTCATCCACTGGACTTTGATTTCGAACTCCTTCAAACGAGGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGGGTTCCGAAGCTACAATCGAGTTCCAGCCCTAACGTAAGCACGTTCGAGATATCAGCGTTGAAATTGCCTTCGCCGCCGTACCGATCGGAGAGTGCTAGGCTTCCCGATGACTACGGTGAGGCGATCCCCTGTTCTTCTCCGCGAGCGAAGAGTGCGAGGATGGCTAAGGAACATTTGTGGCTTCAAGCTTATTCCGACGACTTTGGATCGTCTTTTGGTTTCGGGTGCTGTAAACGGGATGGTTTGAAGGAGACAGATCCTTTTGTTGAAGCCTATAAGAAATGCACAAACGGCCCTTCGAAGAACCGTCGGCCAATCGGCGGCGGTTCTGCAACAAATGGAGTTAAACGTCCTGGTATTAGAAGAAGATTACTTTTTTCACTTTCACGGAAGTGCTGCGCTTCATCCCCGTGA
Protein sequence
MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASSP
Homology
BLAST of Carg10659 vs. NCBI nr
Match:
KAG7037747.1 (hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 349.4 bits (895), Expect = 1.8e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPY 60
MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPY
Sbjct: 1 MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPY 60
Query: 61 RSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDP 120
RSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDP
Sbjct: 61 RSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDP 120
Query: 121 FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASSP 171
FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASSP
Sbjct: 121 FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASSP 170
BLAST of Carg10659 vs. NCBI nr
Match:
KAG6608406.1 (hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0
Query: 1 MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPY 60
MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFE SALKLPSPPY
Sbjct: 1 MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPY 60
Query: 61 RSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDP 120
RSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDP
Sbjct: 61 RSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDP 120
Query: 121 FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASSP 171
FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASSP
Sbjct: 121 FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASSP 170
BLAST of Carg10659 vs. NCBI nr
Match:
KAA0064469.1 (hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK20119.1 hypothetical protein E5676_scaffold134G002440 [Cucumis melo var. makuwa])
HSP 1 Score: 209.1 bits (531), Expect = 2.9e-50
Identity = 109/149 (73.15%), Postives = 116/149 (77.85%), Query Frame = 0
Query: 23 NVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESARLPDDYGEAIPCSSP-- 82
NVPFSWEAKPGVPK QS SP+ S FE S LKLPSPP RSESARL DY I S P
Sbjct: 2 NVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPRC 61
Query: 83 RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVEAYKKCTNGPSKNRRPIG 142
RA+SARMAK+ LWL+AYSD SSFGFGCCK D K+TDPFVEAYKKCTN S + R I
Sbjct: 62 RAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGIT 121
Query: 143 GGSATNGVKRPGIRRRLLFSLSRKCCASS 170
GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 122 GGSATNGVKRPNIIRRVLFSLSRKCCASS 150
BLAST of Carg10659 vs. NCBI nr
Match:
XP_004141298.1 (uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetical protein Csa_012140 [Cucumis sativus])
HSP 1 Score: 204.1 bits (518), Expect = 9.3e-49
Identity = 110/165 (66.67%), Postives = 120/165 (72.73%), Query Frame = 0
Query: 6 SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISA--LKLPSPPYRSE 65
+SS P++ DFE L T+TNVPFSWEAKPGVPK QS SP S FEI A LKLPSPP RSE
Sbjct: 2 ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSE 61
Query: 66 SARLPDDYGEAIPCSSP--RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPF 125
SARL DY I S P RA+SARMAK+ LWL+AYSD SSFGFGCCK D K+TDPF
Sbjct: 62 SARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPF 121
Query: 126 VEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCC 167
VEAYKKC +N R I G SATNG KRP I RR+LFSLSR C
Sbjct: 122 VEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRFWC 161
BLAST of Carg10659 vs. NCBI nr
Match:
KAG5230775.1 (Stimulated by retinoic acid protein [Salix suchowensis])
HSP 1 Score: 65.5 bits (158), Expect = 5.2e-07
Identity = 53/150 (35.33%), Postives = 70/150 (46.67%), Query Frame = 0
Query: 16 ELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESARLPDDYGEAI 75
+++Q++ NVPFSWE KPGVPK+ T+ LKLP PP S+ R P D
Sbjct: 5 DVVQSKANVPFSWEQKPGVPKVTHQEVRPADTWHF-RLKLPPPPRASKCTRFPSDDN--- 64
Query: 76 PCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLK-ETDPFVEAYKKCTNGPSK 135
LQA S SSF + G++ + DPF+ AYKKCT P
Sbjct: 65 ------------------LQALSTS-SSSF------KKGIRIQEDPFLRAYKKCTRSPI- 123
Query: 136 NRRPIGGGSATNGVKRPGIRRRLLFSLSRK 165
N R G A G+ + +R+ SLS K
Sbjct: 125 NGRLTRDGKADRGMPKT-VRKNAGSSLSCK 123
BLAST of Carg10659 vs. ExPASy TrEMBL
Match:
A0A0A0KZZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 2.2e-51
Identity = 114/168 (67.86%), Postives = 124/168 (73.81%), Query Frame = 0
Query: 6 SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISA--LKLPSPPYRSE 65
+SS P++ DFE L T+TNVPFSWEAKPGVPK QS SP S FEI A LKLPSPP RSE
Sbjct: 2 ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSE 61
Query: 66 SARLPDDYGEAIPCSSP--RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPF 125
SARL DY I S P RA+SARMAK+ LWL+AYSD SSFGFGCCK D K+TDPF
Sbjct: 62 SARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPF 121
Query: 126 VEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASS 170
VEAYKKC +N R I G SATNG KRP I RR+LFSLSRKC ASS
Sbjct: 122 VEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRKCFASS 164
BLAST of Carg10659 vs. ExPASy TrEMBL
Match:
A0A5D3D9E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002440 PE=4 SV=1)
HSP 1 Score: 209.1 bits (531), Expect = 1.4e-50
Identity = 109/149 (73.15%), Postives = 116/149 (77.85%), Query Frame = 0
Query: 23 NVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESARLPDDYGEAIPCSSP-- 82
NVPFSWEAKPGVPK QS SP+ S FE S LKLPSPP RSESARL DY I S P
Sbjct: 2 NVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPRC 61
Query: 83 RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVEAYKKCTNGPSKNRRPIG 142
RA+SARMAK+ LWL+AYSD SSFGFGCCK D K+TDPFVEAYKKCTN S + R I
Sbjct: 62 RAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGIT 121
Query: 143 GGSATNGVKRPGIRRRLLFSLSRKCCASS 170
GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 122 GGSATNGVKRPNIIRRVLFSLSRKCCASS 150
BLAST of Carg10659 vs. ExPASy TrEMBL
Match:
A0A067LAQ4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05
Identity = 46/149 (30.87%), Postives = 68/149 (45.64%), Query Frame = 0
Query: 20 TRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESARLPDDYGEAIPCSS 79
++ NVPFSWE KPGV K+ + + N +I +KLP PP ES R+ + +IP
Sbjct: 9 SKGNVPFSWEKKPGVSKVNAMINNNQEQDQI-VVKLPPPPCPIESPRV-SAHEISIPLPP 68
Query: 80 PRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVEAYKKCTNGPSKNRRPI 139
+ + W DPF+ AYK+CT ++++ +
Sbjct: 69 CTFQPPSRSSSRKW------------------------DDPFLAAYKECTKSSTRSKAKV 128
Query: 140 GGGSATNGVKRPGIRRRLLFSLSRKCCAS 169
GGSA G R G+R+ +F LS K S
Sbjct: 129 AGGSA--GFSRSGLRKG-MFKLSCKSSCS 128
BLAST of Carg10659 vs. ExPASy TrEMBL
Match:
A0A6J1ADZ8 (uncharacterized protein LOC110417148 OS=Herrania umbratica OX=108875 GN=LOC110417148 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 1.8e-05
Identity = 51/150 (34.00%), Postives = 68/150 (45.33%), Query Frame = 0
Query: 17 LLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESARLPDDYGEAIP 76
++ ++ NVPFSWE KPGV KL S F KLPSPPY ESAR+ +G IP
Sbjct: 5 IVHSQGNVPFSWENKPGVCKLTSQEGSKEDYF---LQKLPSPPYPPESARIL-IHGVKIP 64
Query: 77 CSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVEAYKKCTNGPSKNR 136
P A+ F +S +R K DPF+ AYK+CT SK +
Sbjct: 65 --PPPC-------------AFQHPFKTS------RRGLRKSDDPFLAAYKECTKSTSKGK 122
Query: 137 RPIGGGSATNGVKRPGIRRRLL-FSLSRKC 166
G + G+++ + FS R C
Sbjct: 125 LAKSDGGS-------GLKKGMFNFSCKRSC 122
BLAST of Carg10659 vs. ExPASy TrEMBL
Match:
A0A5N5K708 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_020423 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 52/151 (34.44%), Postives = 68/151 (45.03%), Query Frame = 0
Query: 16 ELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYR-SESARLPDDYGEA 75
+++Q++ NVPFSWE KPGV K+ V T+ LKLP PP R S+S R P D
Sbjct: 5 DVVQSKANVPFSWEQKPGVSKVTHQEVRPVDTWHF-RLKLPPPPPRASKSTRFPSDDNLQ 64
Query: 76 IPCSSPRAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLK-ETDPFVEAYKKCTNGPS 135
+ L A S F + G++ + DPF AYKKCT P
Sbjct: 65 L------------------LSAPSSSF----------KKGIRIQEDPFWRAYKKCTRSPI 124
Query: 136 KNRRPIGGGSATNGVKRPGIRRRLLFSLSRK 165
N R G A G + +R+ SLS K
Sbjct: 125 -NGRLTRDGKADRG-RPKTVRKNAGSSLSCK 124
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7037747.1 | 1.8e-92 | 100.00 | hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6608406.1 | 1.2e-91 | 99.41 | hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0064469.1 | 2.9e-50 | 73.15 | hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK201... | [more] |
XP_004141298.1 | 9.3e-49 | 66.67 | uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetica... | [more] |
KAG5230775.1 | 5.2e-07 | 35.33 | Stimulated by retinoic acid protein [Salix suchowensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KZZ9 | 2.2e-51 | 67.86 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1 | [more] |
A0A5D3D9E3 | 1.4e-50 | 73.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A067LAQ4 | 1.4e-05 | 30.87 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1 | [more] |
A0A6J1ADZ8 | 1.8e-05 | 34.00 | uncharacterized protein LOC110417148 OS=Herrania umbratica OX=108875 GN=LOC11041... | [more] |
A0A5N5K708 | 4.0e-05 | 34.44 | Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_020423 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |