Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGACGCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCTCTGGTGCGAGCTCAAGTACTCAGTATGATGCACGAATTGCGGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTGAATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTCAAGCAACTTCAGATCAGATCTTCCAATTGTCATGA
mRNA sequence
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGACGCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCTCTGGTGCGAGCTCAAGTACTCAGTATGATGCACGAATTGCGGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTGAATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTCAAGCAACTTCAGATCAGATCTTCCAATTGTCATGA
Coding sequence (CDS)
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGACGCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCTCTGGTGCGAGCTCAAGTACTCAGTATGATGCACGAATTGCGGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTGAATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTCAAGCAACTTCAGATCAGATCTTCCAATTGTCATGA
Protein sequence
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQATSDQIFQLS
Homology
BLAST of Carg10592 vs. NCBI nr
Match:
KAG7037814.1 (hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 281.2 bits (718), Expect = 5.2e-72
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSQATSDQIFQLS 148
KSSAVAKLQSLISLTSQATSDQIFQLS
Sbjct: 121 KSSAVAKLQSLISLTSQATSDQIFQLS 147
BLAST of Carg10592 vs. NCBI nr
Match:
KAG6608487.1 (hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSQ 138
KSSAVAKLQSLISLTSQ
Sbjct: 121 KSSAVAKLQSLISLTSQ 137
BLAST of Carg10592 vs. NCBI nr
Match:
XP_022940904.1 (uncharacterized protein LOC111446352 [Cucurbita moschata])
HSP 1 Score: 261.2 bits (666), Expect = 5.6e-66
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSQ 138
KSSAVAKLQSLISLTS+
Sbjct: 121 KSSAVAKLQSLISLTSK 137
BLAST of Carg10592 vs. NCBI nr
Match:
XP_038899466.1 (uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 uncharacterized protein LOC120086752 [Benincasa hispida])
HSP 1 Score: 201.1 bits (510), Expect = 6.8e-48
Identity = 109/137 (79.56%), Postives = 117/137 (85.40%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKN K ENM+SG GIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA
Sbjct: 1 MPQRDWHKNLKEGENMNSGEGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAC 60
Query: 61 LESPISP-TPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120
L+SPISP +D S AS TQY R+AD +YKAGCAA VGKLDEALHSLNVSLSKCPP
Sbjct: 61 LQSPISPDDSEDGESSASLRTQYVVRMADGSYKAGCAAPTVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKLQSLISLTS 137
EKSSAVAKLQSLISLTS
Sbjct: 121 EKSSAVAKLQSLISLTS 137
BLAST of Carg10592 vs. NCBI nr
Match:
XP_008452533.1 (PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 uncharacterized protein E6C27_scaffold255G00720 [Cucumis melo var. makuwa] >TYK20216.1 uncharacterized protein E5676_scaffold134G003530 [Cucumis melo var. makuwa])
HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45
Identity = 102/137 (74.45%), Postives = 118/137 (86.13%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
M QR+WHK+ +G+E+++S GGI WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+
Sbjct: 1 MHQRNWHKS-QGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAY 60
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPIS P+D A+S +QYD RIAD AYKAGC AL +GKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPIS--PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSQ 138
KSSAVAK+QSLISLTSQ
Sbjct: 121 KSSAVAKIQSLISLTSQ 134
BLAST of Carg10592 vs. ExPASy TrEMBL
Match:
A0A6J1FLM9 (uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC111446352 PE=4 SV=1)
HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSQ 138
KSSAVAKLQSLISLTS+
Sbjct: 121 KSSAVAKLQSLISLTSK 137
BLAST of Carg10592 vs. ExPASy TrEMBL
Match:
A0A5A7VF87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003530 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 6.9e-46
Identity = 102/137 (74.45%), Postives = 118/137 (86.13%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
M QR+WHK+ +G+E+++S GGI WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+
Sbjct: 1 MHQRNWHKS-QGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAY 60
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPIS P+D A+S +QYD RIAD AYKAGC AL +GKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPIS--PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSQ 138
KSSAVAK+QSLISLTSQ
Sbjct: 121 KSSAVAKIQSLISLTSQ 134
BLAST of Carg10592 vs. ExPASy TrEMBL
Match:
A0A1S3BU07 (uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 6.9e-46
Identity = 102/137 (74.45%), Postives = 118/137 (86.13%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
M QR+WHK+ +G+E+++S GGI WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+
Sbjct: 1 MHQRNWHKS-QGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAY 60
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LESPIS P+D A+S +QYD RIAD AYKAGC AL +GKLDEALHSLNVSLSKCPPE
Sbjct: 61 LESPIS--PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKLQSLISLTSQ 138
KSSAVAK+QSLISLTSQ
Sbjct: 121 KSSAVAKIQSLISLTSQ 134
BLAST of Carg10592 vs. ExPASy TrEMBL
Match:
A0A6J1BP49 (uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026168 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 103/137 (75.18%), Postives = 113/137 (82.48%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MP RD KNPK +EN+ S GGI AWN FDNV TTKTPEAL+AEIN AI+ +EYAR+TA
Sbjct: 18 MPHRDLPKNPKERENVISVGGIMAWNAFDNVTATTKTPEALMAEINAAISKIEYARTTAC 77
Query: 61 LESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPPE 120
LES P QD SGAS QYDAR+ADEAYKAGCAALAVGKLD+ALHSLNVSLSKCPPE
Sbjct: 78 LESATPPASQDGGSGASLMPQYDARMADEAYKAGCAALAVGKLDDALHSLNVSLSKCPPE 137
Query: 121 KSSAVAKLQSLISLTSQ 138
K+SAVAKL SLI+LTSQ
Sbjct: 138 KTSAVAKLLSLITLTSQ 154
BLAST of Carg10592 vs. ExPASy TrEMBL
Match:
A0A0A0L090 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45
Identity = 103/138 (74.64%), Postives = 120/138 (86.96%), Query Frame = 0
Query: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI AI+NLEYAR+TA+
Sbjct: 1 MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
Query: 61 LESPISP-TPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120
LESPISP P+D A+S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61 LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKLQSLISLTSQ 138
EKSSAVAK+QSLISLTSQ
Sbjct: 121 EKSSAVAKIQSLISLTSQ 137
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7037814.1 | 5.2e-72 | 100.00 | hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6608487.1 | 6.6e-67 | 100.00 | hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022940904.1 | 5.6e-66 | 98.54 | uncharacterized protein LOC111446352 [Cucurbita moschata] | [more] |
| XP_038899466.1 | 6.8e-48 | 79.56 | uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 unchara... | [more] |
| XP_008452533.1 | 1.4e-45 | 74.45 | PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 unc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FLM9 | 2.7e-66 | 98.54 | uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC1114463... | [more] |
| A0A5A7VF87 | 6.9e-46 | 74.45 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3BU07 | 6.9e-46 | 74.45 | uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=... | [more] |
| A0A6J1BP49 | 1.2e-45 | 75.18 | uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026... | [more] |
| A0A0A0L090 | 1.5e-45 | 74.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
