Carg10548 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10548
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type E3 ubiquitin transferase
Location	Carg_Chr03: 7531698 .. 7532936 (+)
RNA-Seq Expression	Carg10548
Synteny	Carg10548

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAGATGACTTGTGTATTACGATTCCGAGCGATTTCAGGTGTCCGATCTCGTTAGATGTGATGAAATCTCCGGTCAGTTTGTGCACCGGAGTGACGTACGATCGTTCCAGTATCCAGAAATGGCTCGACAATGGAAACAATACTTGTCCGGCCACCATGCAGGTCCTTCAAACCAAGGAGTTCGTCCCTAACCATAATCTCCACCGCCTCATTCAGATTTGGTCTGATTCCTTTCGCCAACGACTCCACTCGCCTGATTCCTCCCCTGTTTCTGACTCGGCTCTCTCCTCAGATCATGTTCTCCGCCTTCTCAAGCGTATGGAGGACGATAAATTACGCGCTGATTCGTTGTCGAGGCTTGTTTCTTTTGCAGCGCAGTCGGTGGAGAATCGGAGGCTTCTTTGCGGAATTGACGGCCTCGTGCCGGTTCTTGTCGATCTTCTTGGCAATGTCGATGGCGATGTTTTGGTTGCGCAGACAGTACGGATGTTGCATTTGATTCGGAATGAGATTGAGGATAAGGAGAGGTTTGTGAAGATGATGTTGAAAAGCGATCGTAATTGTATTTCGTCTCTGCTTTTGATTCTGAGGAAAGAAACCGTCGAATTGAAAATCTGTTCGGTTAATCTGTTAGAGCATCTCGCAATTGACGCCGAGGCGAAGATTGCGATCGCGGAAACAGATGGATTGATGCAAGATTTGCTGAAATTAATGAACTCTGAGAACGATTCAGCCCTAATCGAATCGGTTCTATCGTGCCTAATTTCAATTTCAATGCCGAAACGGATTAAAATCAAATTAGTCCATCTCGGAGTGATTAAATCGGTAACGAAGCTTCTCTCGGAAGCAAACTCGAGTTCGAGCATTTCGATGACGGAGAAGGTTCTGAAAGTACTGGAAACGGCATCGACGGTGAGGGAAGGGAGGACGGAGATCGGAGAGGACTCCGCGTGCATAGCGGCAATAGTACAGAAGGTGTTGAAAGTATCGAACACAGCGACGGAGCACTCAGTGACAACGCTGTGGAGCATTTGCTATCTGTTCAGAGACGAGAAGGCAGCGGAAGCGCTGACGAAGGCGAACGGATTGACGAAGATTCTGCTGTTGATGCAGAGCAACTGCTCGGCGCCGGTCCGGCAGATGGCCAGAGATCTGCTGAAGATTTTCCGGATAACTTCCAAATCGTGCCTGTCGAGTTACGACACGAAAACTACGCATATCATGCCCTGTTGA

mRNA sequence

ATGGTGAAAGATGACTTGTGTATTACGATTCCGAGCGATTTCAGGTGTCCGATCTCGTTAGATGTGATGAAATCTCCGGTCAGTTTGTGCACCGGAGTGACGTACGATCGTTCCAGTATCCAGAAATGGCTCGACAATGGAAACAATACTTGTCCGGCCACCATGCAGGTCCTTCAAACCAAGGAGTTCGTCCCTAACCATAATCTCCACCGCCTCATTCAGATTTGGTCTGATTCCTTTCGCCAACGACTCCACTCGCCTGATTCCTCCCCTGTTTCTGACTCGGCTCTCTCCTCAGATCATGTTCTCCGCCTTCTCAAGCGTATGGAGGACGATAAATTACGCGCTGATTCGTTGTCGAGGCTTGTTTCTTTTGCAGCGCAGTCGGTGGAGAATCGGAGGCTTCTTTGCGGAATTGACGGCCTCGTGCCGGTTCTTGTCGATCTTCTTGGCAATGTCGATGGCGATGTTTTGGTTGCGCAGACAGTACGGATGTTGCATTTGATTCGGAATGAGATTGAGGATAAGGAGAGGTTTGTGAAGATGATGTTGAAAAGCGATCGTAATTGTATTTCGTCTCTGCTTTTGATTCTGAGGAAAGAAACCGTCGAATTGAAAATCTGTTCGGTTAATCTGTTAGAGCATCTCGCAATTGACGCCGAGGCGAAGATTGCGATCGCGGAAACAGATGGATTGATGCAAGATTTGCTGAAATTAATGAACTCTGAGAACGATTCAGCCCTAATCGAATCGGTTCTATCGTGCCTAATTTCAATTTCAATGCCGAAACGGATTAAAATCAAATTAGTCCATCTCGGAGTGATTAAATCGGTAACGAAGCTTCTCTCGGAAGCAAACTCGAGTTCGAGCATTTCGATGACGGAGAAGGTTCTGAAAGTACTGGAAACGGCATCGACGGTGAGGGAAGGGAGGACGGAGATCGGAGAGGACTCCGCGTGCATAGCGGCAATAGTACAGAAGGTGTTGAAAGTATCGAACACAGCGACGGAGCACTCAGTGACAACGCTGTGGAGCATTTGCTATCTGTTCAGAGACGAGAAGGCAGCGGAAGCGCTGACGAAGGCGAACGGATTGACGAAGATTCTGCTGTTGATGCAGAGCAACTGCTCGGCGCCGGTCCGGCAGATGGCCAGAGATCTGCTGAAGATTTTCCGGATAACTTCCAAATCGTGCCTGTCGAGTTACGACACGAAAACTACGCATATCATGCCCTGTTGA

Coding sequence (CDS)

ATGGTGAAAGATGACTTGTGTATTACGATTCCGAGCGATTTCAGGTGTCCGATCTCGTTAGATGTGATGAAATCTCCGGTCAGTTTGTGCACCGGAGTGACGTACGATCGTTCCAGTATCCAGAAATGGCTCGACAATGGAAACAATACTTGTCCGGCCACCATGCAGGTCCTTCAAACCAAGGAGTTCGTCCCTAACCATAATCTCCACCGCCTCATTCAGATTTGGTCTGATTCCTTTCGCCAACGACTCCACTCGCCTGATTCCTCCCCTGTTTCTGACTCGGCTCTCTCCTCAGATCATGTTCTCCGCCTTCTCAAGCGTATGGAGGACGATAAATTACGCGCTGATTCGTTGTCGAGGCTTGTTTCTTTTGCAGCGCAGTCGGTGGAGAATCGGAGGCTTCTTTGCGGAATTGACGGCCTCGTGCCGGTTCTTGTCGATCTTCTTGGCAATGTCGATGGCGATGTTTTGGTTGCGCAGACAGTACGGATGTTGCATTTGATTCGGAATGAGATTGAGGATAAGGAGAGGTTTGTGAAGATGATGTTGAAAAGCGATCGTAATTGTATTTCGTCTCTGCTTTTGATTCTGAGGAAAGAAACCGTCGAATTGAAAATCTGTTCGGTTAATCTGTTAGAGCATCTCGCAATTGACGCCGAGGCGAAGATTGCGATCGCGGAAACAGATGGATTGATGCAAGATTTGCTGAAATTAATGAACTCTGAGAACGATTCAGCCCTAATCGAATCGGTTCTATCGTGCCTAATTTCAATTTCAATGCCGAAACGGATTAAAATCAAATTAGTCCATCTCGGAGTGATTAAATCGGTAACGAAGCTTCTCTCGGAAGCAAACTCGAGTTCGAGCATTTCGATGACGGAGAAGGTTCTGAAAGTACTGGAAACGGCATCGACGGTGAGGGAAGGGAGGACGGAGATCGGAGAGGACTCCGCGTGCATAGCGGCAATAGTACAGAAGGTGTTGAAAGTATCGAACACAGCGACGGAGCACTCAGTGACAACGCTGTGGAGCATTTGCTATCTGTTCAGAGACGAGAAGGCAGCGGAAGCGCTGACGAAGGCGAACGGATTGACGAAGATTCTGCTGTTGATGCAGAGCAACTGCTCGGCGCCGGTCCGGCAGATGGCCAGAGATCTGCTGAAGATTTTCCGGATAACTTCCAAATCGTGCCTGTCGAGTTACGACACGAAAACTACGCATATCATGCCCTGTTGA

Protein sequence

MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLMNSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC

Homology

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BLAST of Carg10548 vs. NCBI nr
Match: KAG7034432.1 (U-box domain-containing protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 781.6 bits (2017), Expect = 3.4e-222
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV
Sbjct: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM
Sbjct: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV
Sbjct: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. NCBI nr
Match: KAG6604275.1 (U-box domain-containing protein 27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 776.2 bits (2003), Expect = 1.4e-220
Identity = 409/412 (99.27%), Postives = 409/412 (99.27%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDV VAQTVRMLHLIRNEIEDKERFV
Sbjct: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVFVAQTVRMLHLIRNEIEDKERFV 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM
Sbjct: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDSALIESVLSCLISISMPKRIK KLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV
Sbjct: 241 NSENDSALIESVLSCLISISMPKRIKTKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCSAPVRQMARDLLKIFRI SKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. NCBI nr
Match: XP_023543245.1 (U-box domain-containing protein 27 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 770.0 bits (1987), Expect = 1.0e-218
Identity = 405/412 (98.30%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS RQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSLRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVL+AQTVR+LHLIRNEIEDKERF 
Sbjct: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLIAQTVRLLHLIRNEIEDKERFA 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           K MLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM
Sbjct: 181 KTMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSE NSSSSISMTEKVLKV
Sbjct: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEPNSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCSAPVRQMARDLLKIFRI SKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. NCBI nr
Match: XP_022950098.1 (U-box domain-containing protein 27 [Cucurbita moschata])

HSP 1 Score: 769.6 bits (1986), Expect = 1.3e-218
Identity = 405/412 (98.30%), Postives = 408/412 (99.03%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS RQRLHSPDSSPVSD+ALSSDHVLRL+KRMEDDKLRADSLS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSLRQRLHSPDSSPVSDTALSSDHVLRLVKRMEDDKLRADSLS 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVR+LHLIRNEIEDKERFV
Sbjct: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRLLHLIRNEIEDKERFV 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           KMMLKSDRNCI SLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM
Sbjct: 181 KMMLKSDRNCIWSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKS TKLLSEANSSSSISMTEKVLKV
Sbjct: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSATKLLSEANSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCSAPVRQMARDLLKIFRI SKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. NCBI nr
Match: XP_022978946.1 (U-box domain-containing protein 27-like [Cucurbita maxima])

HSP 1 Score: 765.8 bits (1976), Expect = 1.9e-217
Identity = 402/412 (97.57%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS RQRLHSPDSSPVSD+ALSSDH LRL+KRMEDDKLRADSLS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSLRQRLHSPDSSPVSDAALSSDHALRLVKRMEDDKLRADSLS 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAAQSVEN+RLLCGIDGLVPVLVDLLGNVDGDVLVAQTVR+LHLIRNEIEDKERF 
Sbjct: 121 RLVSFAAQSVENQRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRLLHLIRNEIEDKERFA 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           K MLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM
Sbjct: 181 KTMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV
Sbjct: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEH+VTTLWSICYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHAVTTLWSICYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCSAPVRQMARDLLKIFRI SKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. ExPASy Swiss-Prot
Match: Q9FLF4 (U-box domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=PUB27 PE=2 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.6e-116
Identity = 222/422 (52.61%), Postives = 311/422 (73.70%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           M KDDLCIT+P+ FRCPISLDVMKSPVSLCTGVTYDR+SIQ+WLD GNNTCPATMQ+LQ 
Sbjct: 1   MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQR--LHSPD-SSPVSDSALSSDHVLRLLKRMEDDKLRAD 120
           K+F+PN  L RLI+IWSDS R+R  + S + ++P  D    +   +++ K   DD+   +
Sbjct: 61  KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDR---E 120

Query: 121 SLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGD-------VLVAQTVRMLHLIR 180
            LS++V F  +S +NR  L G D  V +LVDL+  VD +       ++V + V++L  IR
Sbjct: 121 VLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIR 180

Query: 181 NEIEDKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETD 240
           +++ D+ RF  ++L + R+ +S ++ + +   VELKI    LLE +A+DAE+K+ IAE D
Sbjct: 181 SKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERD 240

Query: 241 GLMQDLLKLMNSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSS 300
           GL+ +L+K ++ ++D +LIES LSCLI+IS PKR+K+ L+   +I  VTKLLS++ SS S
Sbjct: 241 GLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLS 300

Query: 301 ISMTEKVLKVLETASTVREGRTEI-GEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYL 360
           +S+TEK LK+LE  ++ +EGR+EI G D  C+  +V+K++KVS  ATEH+VT LWS+ YL
Sbjct: 301 VSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYL 360

Query: 361 FRDEKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHI 412
           F+++KA EA+T  NG+TKILLL+QSNCS  VR+M  DLLK+F++ S+SCLS+YDTKTTHI
Sbjct: 361 FKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNSRSCLSAYDTKTTHI 419

[Close]

BLAST of Carg10548 vs. ExPASy Swiss-Prot
Match: Q9LXE3 (U-box domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=PUB28 PE=1 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 4.4e-103
Identity = 207/417 (49.64%), Postives = 300/417 (71.94%), Query Frame = 0


Query: 1   MVKDDLCI-TIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQ 60
           M  DDL I T+P  F+CPISLDVMKSPVSL TGVTYDR SIQ+WLD+GNNTCPATMQ+LQ
Sbjct: 1   MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60

Query: 61  TKEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSL 120
            KEFVPN  LHRLI  WSDS  +R  S   SP SD+  + D +   ++R    ++  D+ 
Sbjct: 61  NKEFVPNLTLHRLIDHWSDSINRRADS--ESPESDTP-TRDEINAAIERF---RIENDAR 120

Query: 121 SRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGN----VDGD-VLVAQTVRMLHLIRNEIE 180
           S+++ FA +S ENR  L G D  V +LVDL+ +     D   +LV + V++L +IR +I 
Sbjct: 121 SKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIF 180

Query: 181 DKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQ 240
           D+ R   ++L +  +C++S  L++++   +LKI    +LE +A+DAE+K+ IA+ +GL+ 
Sbjct: 181 DRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVT 240

Query: 241 DLLKLMNSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMT 300
           +++KL++S++DS+LIE+ LS LI+I+  KR+K+ L+   ++  +T LL++   ++S+S+T
Sbjct: 241 EIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTD--PTTSVSVT 300

Query: 301 EKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEK 360
           EK LK+LE  S+ +EGR+EI  D  C+  +V K++KVS  ATEH+VT LWS+CYLF+++K
Sbjct: 301 EKCLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKK 360

Query: 361 AAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMP 412
           A +A+ + NG+TKILLL+QSNCS  VR M  DLLK+F++ S+SCLS Y+TKTTHIMP
Sbjct: 361 AQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTTHIMP 408

[Close]

BLAST of Carg10548 vs. ExPASy Swiss-Prot
Match: Q9LSA6 (U-box domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=PUB29 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.7e-89
Identity = 194/415 (46.75%), Postives = 289/415 (69.64%), Query Frame = 0


Query: 8   ITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNH 67
           IT+PS F+CPISLDVM+SPVSLCTGVTYDR+SIQ+WLD GNNTCPATMQ+L+TK+FVPN 
Sbjct: 10  ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69

Query: 68  NLHRLIQIWSDSFRQRLHSPDS----SPVSDSALSSDHVLRLLKRMEDDKLRADSLSRLV 127
            L RLI IWSDS  +R H+ DS     P      + + V  LL+R+    +  ++L ++V
Sbjct: 70  TLQRLINIWSDSIGRR-HNGDSPVLNPPSGREVPTKEEVNVLLERL----MSLENLMKIV 129

Query: 128 SFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDV-LVAQTVRMLHLIRNEIEDKERFVKM 187
            F   S  NR  L      VP+LVD++      + LV   +R+L  I+    D+ER   +
Sbjct: 130 RFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIK---VDRERLSNL 189

Query: 188 MLKSD-RNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLMN 247
           ML +D  +C++++LL +++  +E KI SV +L+ ++ DA++K+ IAE DG++ +++K ++
Sbjct: 190 MLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSIS 249

Query: 248 --SENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLK 307
               +D +LIE+ LS LI+IS  KR++ KL+    I  +  +L    + +++++TEK LK
Sbjct: 250 ITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILL-TETLTNVAVTEKSLK 309

Query: 308 VLETASTVREGRTEI-GEDSA-CIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAA- 367
           +LET S+ REGR EI G+D+  C+  +V+K+LKVS TATEH+VT LW +CY+FR++K   
Sbjct: 310 LLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVE 369

Query: 368 EALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMP 412
           E + ++NG+TK+L+++QSNCSA VRQMA+DL+K+ +  S S L++Y+TKTTHIMP
Sbjct: 370 ETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNS-SALAAYETKTTHIMP 414

[Close]

BLAST of Carg10548 vs. ExPASy Swiss-Prot
Match: Q9LT79 (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-32
Identity = 115/400 (28.75%), Postives = 205/400 (51.25%), Query Frame = 0


Query: 5   DLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNN-TCPATMQVLQTKEF 64
           DL I IP  FRCPISL++M+ PV++CTG TYDR+SI+ W+  GNN TCP T   L     
Sbjct: 9   DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68

Query: 65  VPNHNLHRLIQIWSDSFR----QRLHSP--DSSPVSDSALSSDHVLRLLKRMEDDKLRAD 124
           +PNH L RLIQ W  + R    +R+ +P   + P S  AL S     +       + RA 
Sbjct: 69  IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLS-QASAITGTHVSVRSRAA 128

Query: 125 SLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKE 184
           +L RL  FA  S +NR L+   +    ++  L        LV++++ +L ++   I +  
Sbjct: 129 ALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVML--PITEPN 188

Query: 185 RFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAI---DAEAKIAIAETDGLMQ 244
           +FV   + SD   +  L  +L   ++E ++ +  L+E ++     A+ K +I+ ++ + +
Sbjct: 189 QFVS--ISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFE 248

Query: 245 DLLKLM-NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSS-SIS 304
            +L L+ N  +    ++  +  L ++   K  +    H+ +     ++L +  ++     
Sbjct: 249 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTR----HIAITAGAPEILIDRLAADFDRC 308

Query: 305 MTEKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRD 364
            TE+ L  +E      EG    GE +  +  +V+ +L+VS+ ATE++   L ++C    +
Sbjct: 309 DTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC--TAE 368

Query: 365 EKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFR 393
           E+  E    A  + ++LL++QS C+   ++ A+ LLK+ R
Sbjct: 369 ERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLR 397

[Close]

BLAST of Carg10548 vs. ExPASy Swiss-Prot
Match: Q9FXA4 (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.0e-32
Identity = 119/434 (27.42%), Postives = 216/434 (49.77%), Query Frame = 0


Query: 5   DLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFV 64
           DL I IP  FRCPISLD+M  PV++ TG TYDR+SI  W+  GN TCP T   L     +
Sbjct: 9   DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68

Query: 65  PNHNLHRLIQIWSDSFR----QRLHSP--DSSPVS-------DSALSSDHVLRLLKRMED 124
           PNH L RLIQ W  + R    +R+ +P   + P+S        SA++  HV         
Sbjct: 69  PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHV--------S 128

Query: 125 DKLRADSLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVR------- 184
            + RA ++ RL   A  S +NR L+ G +    ++  L  +++   L ++ V        
Sbjct: 129 VRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLV 188

Query: 185 MLHLIRNEIEDKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEA-- 244
           +LH+   E E         + SD + +  +  +L   ++E+++ +  L+E +   A++  
Sbjct: 189 LLHMTETECE--------AVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMD 248

Query: 245 -KIAIAETDGLMQDLLKLM-NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTK 304
            K+ I+ +D + + +L L+ N  +    ++  +  + ++ + K+ +    HL +      
Sbjct: 249 LKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTR----HLAISAGAPG 308

Query: 305 LLSEANSSS-SISMTEKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHS 364
           +L +  ++      TE+ L  +E    + EG    GE +  +  +V+ +L+VS+ ATE++
Sbjct: 309 ILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYA 368

Query: 365 VTTLWSICYLFRDEKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRIT--SKS 412
              L ++C    +E+  +    A  +T++LLL+QS+C+   ++ A+ LLK+ R +    S
Sbjct: 369 AGALLALC--TAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDS 420

[Close]

BLAST of Carg10548 vs. ExPASy TrEMBL
Match: A0A6J1GDY4 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453282 PE=4 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 6.5e-219
Identity = 405/412 (98.30%), Postives = 408/412 (99.03%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS RQRLHSPDSSPVSD+ALSSDHVLRL+KRMEDDKLRADSLS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSLRQRLHSPDSSPVSDTALSSDHVLRLVKRMEDDKLRADSLS 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVR+LHLIRNEIEDKERFV
Sbjct: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRLLHLIRNEIEDKERFV 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           KMMLKSDRNCI SLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM
Sbjct: 181 KMMLKSDRNCIWSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKS TKLLSEANSSSSISMTEKVLKV
Sbjct: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSATKLLSEANSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCSAPVRQMARDLLKIFRI SKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. ExPASy TrEMBL
Match: A0A6J1IPD9 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478747 PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 9.4e-218
Identity = 402/412 (97.57%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS RQRLHSPDSSPVSD+ALSSDH LRL+KRMEDDKLRADSLS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSLRQRLHSPDSSPVSDAALSSDHALRLVKRMEDDKLRADSLS 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAAQSVEN+RLLCGIDGLVPVLVDLLGNVDGDVLVAQTVR+LHLIRNEIEDKERF 
Sbjct: 121 RLVSFAAQSVENQRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRLLHLIRNEIEDKERFA 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           K MLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM
Sbjct: 181 KTMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV
Sbjct: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEH+VTTLWSICYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHAVTTLWSICYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCSAPVRQMARDLLKIFRI SKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. ExPASy TrEMBL
Match: A0A6J1HHS1 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111463585 PE=4 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 4.4e-199
Identity = 368/412 (89.32%), Postives = 387/412 (93.93%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MV+DDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQ+LQT
Sbjct: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS RQR+HSPDSSPVSDS LSSD VL L+KR+E D+ R DSL 
Sbjct: 61  KEFVPNHNLHRLIQIWSDSLRQRVHSPDSSPVSDSVLSSDQVLDLVKRIEIDQSRTDSLL 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAA+SVENRRLLCGI G VPVLVDLL NV+G VLV QTVR+LHLIRNEIEDKERFV
Sbjct: 121 RLVSFAAKSVENRRLLCGIGGFVPVLVDLLSNVNGGVLVEQTVRLLHLIRNEIEDKERFV 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           K MLKSDRNC+SSLLLILRK TVELKICS +LLEHLAIDAE+KI IAETDGLMQ+LLKL 
Sbjct: 181 KSMLKSDRNCLSSLLLILRKGTVELKICSASLLEHLAIDAESKIVIAETDGLMQELLKLT 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDS LIESVLSCLISISMPKRIKIKLVHLG IKSVTKLLSEANSSSS+S+TEKVLKV
Sbjct: 241 NSENDSNLIESVLSCLISISMPKRIKIKLVHLGAIKSVTKLLSEANSSSSVSITEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTV EGR EIGEDS C+AAIVQKVLKVSNTATEH+VTTLWS+CYLFRDEKAAEALT
Sbjct: 301 LETASTVWEGRMEIGEDSTCLAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCS PVRQMARDLLKIFRI SKSCL+SYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLASYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. ExPASy TrEMBL
Match: A0A6J1KVE8 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111496784 PE=4 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 1.2e-196
Identity = 363/412 (88.11%), Postives = 384/412 (93.20%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MV+DDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQ+LQT
Sbjct: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS R R+HSPDSSPVSDS LSSD VL L+KR+E D+   DSL 
Sbjct: 61  KEFVPNHNLHRLIQIWSDSLRHRVHSPDSSPVSDSVLSSDQVLDLVKRIEIDQSSTDSLL 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFAA+SVENRRLLCGI G VPVLVDLL NV+G VLV QTVR+LHLIRNEIEDKERFV
Sbjct: 121 RLVSFAAKSVENRRLLCGIGGFVPVLVDLLRNVNGGVLVEQTVRLLHLIRNEIEDKERFV 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           K MLKSDRNC+SSLLL+LRK TVELKICS +LLEHLAIDAE+KI IAETDGLMQ+LLKL 
Sbjct: 181 KSMLKSDRNCLSSLLLVLRKGTVELKICSASLLEHLAIDAESKIVIAETDGLMQELLKLT 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSENDS LIESVLSCLISISMPKRIKI LVHLG IKSVTKLLSE NS+SS+S+TEKVLKV
Sbjct: 241 NSENDSNLIESVLSCLISISMPKRIKIILVHLGAIKSVTKLLSETNSTSSVSITEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGR EIGEDS C+AAIVQKVLKVSNTATEH+VTTLWS+CYLFRDEKAAEALT
Sbjct: 301 LETASTVREGRMEIGEDSTCLAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCS PVRQMARDLLKIFRI SKSCL+SYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLASYDTKTTHIMPC 412

[Close]

BLAST of Carg10548 vs. ExPASy TrEMBL
Match: A0A5A7SMT0 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1230G00310 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.0e-192
Identity = 361/412 (87.62%), Postives = 380/412 (92.23%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSLS 120
           KEFVPNHNLHRLIQIWSDS  QRLH    SPVSDS+LSS  +LRL+ RM+D + RADSL 
Sbjct: 61  KEFVPNHNLHRLIQIWSDSHHQRLH----SPVSDSSLSSHQILRLINRMDDHRSRADSLP 120

Query: 121 RLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKERFV 180
           RLVSFA++SVENRRLLCGIDGLVPVLVDLL NVD   LV QTVR+LHLIR+EI DKERFV
Sbjct: 121 RLVSFASESVENRRLLCGIDGLVPVLVDLLCNVDAGDLVDQTVRLLHLIRSEIGDKERFV 180

Query: 181 KMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLM 240
           K ML SDRNCISSLLLILRK TVELKICS NLLE+LAIDAEAKI IAETDGLM++LLKL+
Sbjct: 181 KTMLNSDRNCISSLLLILRKGTVELKICSANLLEYLAIDAEAKIVIAETDGLMRELLKLI 240

Query: 241 NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLKV 300
           NSEND+ +IES LSCLISISMPKRIKIKLV LGVIKSVTKLLSE+NSSSSISMTEKVLKV
Sbjct: 241 NSENDTTVIESALSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSISMTEKVLKV 300

Query: 301 LETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAAEALT 360
           LETASTVREGR EIGEDS C+AAIVQKVLKVSN ATEH+VTTLWS+CYLFRDEKA EALT
Sbjct: 301 LETASTVREGRKEIGEDSVCVAAIVQKVLKVSNAATEHAVTTLWSVCYLFRDEKAGEALT 360

Query: 361 KANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMPC 413
           KANGLTKILLLMQSNCS PVRQMARDLLKIFRI SKSCLSSYDTKTTHIMPC
Sbjct: 361 KANGLTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 408

[Close]

BLAST of Carg10548 vs. TAIR 10
Match: AT5G64660.1 (CYS, MET, PRO, and GLY protein 2 )

HSP 1 Score: 420.2 bits (1079), Expect = 1.9e-117
Identity = 222/422 (52.61%), Postives = 311/422 (73.70%), Query Frame = 0


Query: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           M KDDLCIT+P+ FRCPISLDVMKSPVSLCTGVTYDR+SIQ+WLD GNNTCPATMQ+LQ 
Sbjct: 1   MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60

Query: 61  KEFVPNHNLHRLIQIWSDSFRQR--LHSPD-SSPVSDSALSSDHVLRLLKRMEDDKLRAD 120
           K+F+PN  L RLI+IWSDS R+R  + S + ++P  D    +   +++ K   DD+   +
Sbjct: 61  KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDR---E 120

Query: 121 SLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGD-------VLVAQTVRMLHLIR 180
            LS++V F  +S +NR  L G D  V +LVDL+  VD +       ++V + V++L  IR
Sbjct: 121 VLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIR 180

Query: 181 NEIEDKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETD 240
           +++ D+ RF  ++L + R+ +S ++ + +   VELKI    LLE +A+DAE+K+ IAE D
Sbjct: 181 SKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERD 240

Query: 241 GLMQDLLKLMNSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSS 300
           GL+ +L+K ++ ++D +LIES LSCLI+IS PKR+K+ L+   +I  VTKLLS++ SS S
Sbjct: 241 GLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLS 300

Query: 301 ISMTEKVLKVLETASTVREGRTEI-GEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYL 360
           +S+TEK LK+LE  ++ +EGR+EI G D  C+  +V+K++KVS  ATEH+VT LWS+ YL
Sbjct: 301 VSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYL 360

Query: 361 FRDEKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHI 412
           F+++KA EA+T  NG+TKILLL+QSNCS  VR+M  DLLK+F++ S+SCLS+YDTKTTHI
Sbjct: 361 FKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNSRSCLSAYDTKTTHI 419

[Close]

BLAST of Carg10548 vs. TAIR 10
Match: AT5G09800.1 (ARM repeat superfamily protein )

HSP 1 Score: 376.3 bits (965), Expect = 3.1e-104
Identity = 207/417 (49.64%), Postives = 300/417 (71.94%), Query Frame = 0


Query: 1   MVKDDLCI-TIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQ 60
           M  DDL I T+P  F+CPISLDVMKSPVSL TGVTYDR SIQ+WLD+GNNTCPATMQ+LQ
Sbjct: 1   MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60

Query: 61  TKEFVPNHNLHRLIQIWSDSFRQRLHSPDSSPVSDSALSSDHVLRLLKRMEDDKLRADSL 120
            KEFVPN  LHRLI  WSDS  +R  S   SP SD+  + D +   ++R    ++  D+ 
Sbjct: 61  NKEFVPNLTLHRLIDHWSDSINRRADS--ESPESDTP-TRDEINAAIERF---RIENDAR 120

Query: 121 SRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGN----VDGD-VLVAQTVRMLHLIRNEIE 180
           S+++ FA +S ENR  L G D  V +LVDL+ +     D   +LV + V++L +IR +I 
Sbjct: 121 SKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIF 180

Query: 181 DKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQ 240
           D+ R   ++L +  +C++S  L++++   +LKI    +LE +A+DAE+K+ IA+ +GL+ 
Sbjct: 181 DRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVT 240

Query: 241 DLLKLMNSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMT 300
           +++KL++S++DS+LIE+ LS LI+I+  KR+K+ L+   ++  +T LL++   ++S+S+T
Sbjct: 241 EIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTD--PTTSVSVT 300

Query: 301 EKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEK 360
           EK LK+LE  S+ +EGR+EI  D  C+  +V K++KVS  ATEH+VT LWS+CYLF+++K
Sbjct: 301 EKCLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKK 360

Query: 361 AAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMP 412
           A +A+ + NG+TKILLL+QSNCS  VR M  DLLK+F++ S+SCLS Y+TKTTHIMP
Sbjct: 361 AQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTTHIMP 408

[Close]

BLAST of Carg10548 vs. TAIR 10
Match: AT3G18710.1 (plant U-box 29 )

HSP 1 Score: 330.5 bits (846), Expect = 1.9e-90
Identity = 194/415 (46.75%), Postives = 289/415 (69.64%), Query Frame = 0


Query: 8   ITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNH 67
           IT+PS F+CPISLDVM+SPVSLCTGVTYDR+SIQ+WLD GNNTCPATMQ+L+TK+FVPN 
Sbjct: 10  ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69

Query: 68  NLHRLIQIWSDSFRQRLHSPDS----SPVSDSALSSDHVLRLLKRMEDDKLRADSLSRLV 127
            L RLI IWSDS  +R H+ DS     P      + + V  LL+R+    +  ++L ++V
Sbjct: 70  TLQRLINIWSDSIGRR-HNGDSPVLNPPSGREVPTKEEVNVLLERL----MSLENLMKIV 129

Query: 128 SFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDV-LVAQTVRMLHLIRNEIEDKERFVKM 187
            F   S  NR  L      VP+LVD++      + LV   +R+L  I+    D+ER   +
Sbjct: 130 RFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIK---VDRERLSNL 189

Query: 188 MLKSD-RNCISSLLLILRKETVELKICSVNLLEHLAIDAEAKIAIAETDGLMQDLLKLMN 247
           ML +D  +C++++LL +++  +E KI SV +L+ ++ DA++K+ IAE DG++ +++K ++
Sbjct: 190 MLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSIS 249

Query: 248 --SENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSSSISMTEKVLK 307
               +D +LIE+ LS LI+IS  KR++ KL+    I  +  +L    + +++++TEK LK
Sbjct: 250 ITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILL-TETLTNVAVTEKSLK 309

Query: 308 VLETASTVREGRTEI-GEDSA-CIAAIVQKVLKVSNTATEHSVTTLWSICYLFRDEKAA- 367
           +LET S+ REGR EI G+D+  C+  +V+K+LKVS TATEH+VT LW +CY+FR++K   
Sbjct: 310 LLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVE 369

Query: 368 EALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRITSKSCLSSYDTKTTHIMP 412
           E + ++NG+TK+L+++QSNCSA VRQMA+DL+K+ +  S S L++Y+TKTTHIMP
Sbjct: 370 ETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNS-SALAAYETKTTHIMP 414

[Close]

BLAST of Carg10548 vs. TAIR 10
Match: AT3G19380.1 (plant U-box 25 )

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-33
Identity = 115/400 (28.75%), Postives = 205/400 (51.25%), Query Frame = 0


Query: 5   DLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNN-TCPATMQVLQTKEF 64
           DL I IP  FRCPISL++M+ PV++CTG TYDR+SI+ W+  GNN TCP T   L     
Sbjct: 9   DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68

Query: 65  VPNHNLHRLIQIWSDSFR----QRLHSP--DSSPVSDSALSSDHVLRLLKRMEDDKLRAD 124
           +PNH L RLIQ W  + R    +R+ +P   + P S  AL S     +       + RA 
Sbjct: 69  IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLS-QASAITGTHVSVRSRAA 128

Query: 125 SLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVRMLHLIRNEIEDKE 184
           +L RL  FA  S +NR L+   +    ++  L        LV++++ +L ++   I +  
Sbjct: 129 ALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVML--PITEPN 188

Query: 185 RFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAI---DAEAKIAIAETDGLMQ 244
           +FV   + SD   +  L  +L   ++E ++ +  L+E ++     A+ K +I+ ++ + +
Sbjct: 189 QFVS--ISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFE 248

Query: 245 DLLKLM-NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTKLLSEANSSS-SIS 304
            +L L+ N  +    ++  +  L ++   K  +    H+ +     ++L +  ++     
Sbjct: 249 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTR----HIAITAGAPEILIDRLAADFDRC 308

Query: 305 MTEKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHSVTTLWSICYLFRD 364
            TE+ L  +E      EG    GE +  +  +V+ +L+VS+ ATE++   L ++C    +
Sbjct: 309 DTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC--TAE 368

Query: 365 EKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFR 393
           E+  E    A  + ++LL++QS C+   ++ A+ LLK+ R
Sbjct: 369 ERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLR 397

[Close]

BLAST of Carg10548 vs. TAIR 10
Match: AT1G49780.1 (plant U-box 26 )

HSP 1 Score: 140.6 bits (353), Expect = 2.9e-33
Identity = 119/434 (27.42%), Postives = 216/434 (49.77%), Query Frame = 0


Query: 5   DLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFV 64
           DL I IP  FRCPISLD+M  PV++ TG TYDR+SI  W+  GN TCP T   L     +
Sbjct: 9   DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68

Query: 65  PNHNLHRLIQIWSDSFR----QRLHSP--DSSPVS-------DSALSSDHVLRLLKRMED 124
           PNH L RLIQ W  + R    +R+ +P   + P+S        SA++  HV         
Sbjct: 69  PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHV--------S 128

Query: 125 DKLRADSLSRLVSFAAQSVENRRLLCGIDGLVPVLVDLLGNVDGDVLVAQTVR------- 184
            + RA ++ RL   A  S +NR L+ G +    ++  L  +++   L ++ V        
Sbjct: 129 VRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLV 188

Query: 185 MLHLIRNEIEDKERFVKMMLKSDRNCISSLLLILRKETVELKICSVNLLEHLAIDAEA-- 244
           +LH+   E E         + SD + +  +  +L   ++E+++ +  L+E +   A++  
Sbjct: 189 LLHMTETECE--------AVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMD 248

Query: 245 -KIAIAETDGLMQDLLKLM-NSENDSALIESVLSCLISISMPKRIKIKLVHLGVIKSVTK 304
            K+ I+ +D + + +L L+ N  +    ++  +  + ++ + K+ +    HL +      
Sbjct: 249 LKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTR----HLAISAGAPG 308

Query: 305 LLSEANSSS-SISMTEKVLKVLETASTVREGRTEIGEDSACIAAIVQKVLKVSNTATEHS 364
           +L +  ++      TE+ L  +E    + EG    GE +  +  +V+ +L+VS+ ATE++
Sbjct: 309 ILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYA 368

Query: 365 VTTLWSICYLFRDEKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRIT--SKS 412
              L ++C    +E+  +    A  +T++LLL+QS+C+   ++ A+ LLK+ R +    S
Sbjct: 369 AGALLALC--TAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDS 420

The following BLAST results are available for this feature:

BLAST of Carg10548 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034432.1	3.4e-222	100.00	U-box domain-containing protein 27, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6604275.1	1.4e-220	99.27	U-box domain-containing protein 27, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023543245.1	1.0e-218	98.30	U-box domain-containing protein 27 [Cucurbita pepo subsp. pepo]	[more]
XP_022950098.1	1.3e-218	98.30	U-box domain-containing protein 27 [Cucurbita moschata]	[more]
XP_022978946.1	1.9e-217	97.57	U-box domain-containing protein 27-like [Cucurbita maxima]	[more]

BLAST of Carg10548 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLF4	2.6e-116	52.61	U-box domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=PUB27 PE=2...	[more]
Q9LXE3	4.4e-103	49.64	U-box domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=PUB28 PE=1...	[more]
Q9LSA6	2.7e-89	46.75	U-box domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=PUB29 PE=1...	[more]
Q9LT79	1.8e-32	28.75	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
Q9FXA4	4.0e-32	27.42	U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2...	[more]

BLAST of Carg10548 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDY4	6.5e-219	98.30	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453282...	[more]
A0A6J1IPD9	9.4e-218	97.57	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478747 P...	[more]
A0A6J1HHS1	4.4e-199	89.32	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111463585...	[more]
A0A6J1KVE8	1.2e-196	88.11	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111496784 P...	[more]
A0A5A7SMT0	1.0e-192	87.62	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Carg10548 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64660.1	1.9e-117	52.61	CYS, MET, PRO, and GLY protein 2	[more]
AT5G09800.1	3.1e-104	49.64	ARM repeat superfamily protein	[more]
AT3G18710.1	1.9e-90	46.75	plant U-box 29	[more]
AT3G19380.1	1.3e-33	28.75	plant U-box 25	[more]
AT1G49780.1	2.9e-33	27.42	plant U-box 26	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 13..76 e-value: 3.2E-26 score: 103.1
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 10..78 e-value: 2.5E-17 score: 62.8
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 9..83 score: 35.251881
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 88..400 e-value: 6.0E-20 score: 73.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 3..87 e-value: 1.6E-25 score: 91.0
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 4..412
None	No IPR available	PANTHER	PTHR22849:SF20	U-BOX DOMAIN-CONTAINING PROTEIN 27-RELATED	coord: 4..412
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 14..56 e-value: 8.09363E-25 score: 93.8374
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 6..78
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 165..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10548-RA	Carg10548-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity