Carg10502 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10502
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	Carg_Chr03: 8459305 .. 8459661 (-)
RNA-Seq Expression	Carg10502
Synteny	Carg10502

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGGAGAAACAGTGGCGGCGGAGGAGGAGCAGCAGCAGCGCCGAAGCTGGAGCTGAAGTTGAACCTGTCTCCGCCGAGGGCGAATAGAGGAGTGGAGTCACCGAGCCGGTCGGCTACGGTGTCGCCGACGTCGCCGCCGAGCTCGTGTGTGTCGTCGGAGGAGGAGATGACGGTGGGGAGAGTGAGATACTCGAGCAGCCCTGAAGCGACATCGATGATGCTGGTCGGATGCCCACGGTGTCTGATGTATGTTATGCTGTCGGAAGAAGACCCAAAATGTCCGAAATGCAAAAGCACTGTTCTTCTCGACGTTCTCCATGATAACTCCGCCGTCAAAACCAGAAGAAACTAG

mRNA sequence

ATGAACCGGAGAAACAGTGGCGGCGGAGGAGGAGCAGCAGCAGCGCCGAAGCTGGAGCTGAAGTTGAACCTGTCTCCGCCGAGGGCGAATAGAGGAGTGGAGTCACCGAGCCGGTCGGCTACGGTGTCGCCGACGTCGCCGCCGAGCTCGTGTGTGTCGTCGGAGGAGGAGATGACGGTGGGGAGAGTGAGATACTCGAGCAGCCCTGAAGCGACATCGATGATGCTGGTCGGATGCCCACGGTGTCTGATGTATGTTATGCTGTCGGAAGAAGACCCAAAATGTCCGAAATGCAAAAGCACTGTTCTTCTCGACGTTCTCCATGATAACTCCGCCGTCAAAACCAGAAGAAACTAG

Coding sequence (CDS)

ATGAACCGGAGAAACAGTGGCGGCGGAGGAGGAGCAGCAGCAGCGCCGAAGCTGGAGCTGAAGTTGAACCTGTCTCCGCCGAGGGCGAATAGAGGAGTGGAGTCACCGAGCCGGTCGGCTACGGTGTCGCCGACGTCGCCGCCGAGCTCGTGTGTGTCGTCGGAGGAGGAGATGACGGTGGGGAGAGTGAGATACTCGAGCAGCCCTGAAGCGACATCGATGATGCTGGTCGGATGCCCACGGTGTCTGATGTATGTTATGCTGTCGGAAGAAGACCCAAAATGTCCGAAATGCAAAAGCACTGTTCTTCTCGACGTTCTCCATGATAACTCCGCCGTCAAAACCAGAAGAAACTAG

Protein sequence

MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTVGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN

Homology

[Close]

BLAST of Carg10502 vs. NCBI nr
Match: XP_022925998.1 (uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034480.1 hypothetical protein SDJN02_04209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
           GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 118

[Close]

BLAST of Carg10502 vs. NCBI nr
Match: XP_022979077.1 (uncharacterized protein LOC111478822 [Cucurbita maxima])

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
           GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVK RRN
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRRN 118

[Close]

BLAST of Carg10502 vs. NCBI nr
Match: XP_023543892.1 (uncharacterized protein LOC111803624 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MNRRNSGG-GGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMT 60
           MNRRNSGG GGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMT
Sbjct: 1   MNRRNSGGRGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMT 60

Query: 61  VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
           VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN
Sbjct: 61  VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119

[Close]

BLAST of Carg10502 vs. NCBI nr
Match: XP_004143338.1 (uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacterized protein E6C27_scaffold541G00770 [Cucumis melo var. makuwa] >KGN48289.1 hypothetical protein Csa_003966 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 7.2e-48
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKTR+N
Sbjct: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of Carg10502 vs. NCBI nr
Match: XP_008462606.1 (PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 104/117 (88.89%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRR 118
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKT +
Sbjct: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEK 110

[Close]

BLAST of Carg10502 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.5e-35
Identity = 82/118 (69.49%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 15  APKLELKLNLSPPRAN--RGVESPSRSATVSPTSPPSSCVSSEEEMTVGRVRYSSSPEAT 74
           +PKLELKLNLSPP ++  R V SPSRSAT SPTSPPSSCVSSE       VRYS+SPE T
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 75  SMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN------------SAVKTRRN 119
           SM+LVGCPRCLMYVMLSE+DPKCPKCKSTVLLD LH+N            S  KTRRN
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAASSGRKTRRN 122

[Close]

BLAST of Carg10502 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-22
Identity = 63/115 (54.78%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           M+RRN  G       PKLEL+LNLSPP +     S  RS   S T+ PSSCVSSE     
Sbjct: 1   MSRRNKNG-------PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE----- 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKT 116
                  +   TSM+LVGCPRCLMYVMLS++DPKCPKCKSTVLLD L +N+   T
Sbjct: 61  --TNQEENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAAT 101

[Close]

BLAST of Carg10502 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 12  AAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTVGRVRYSSSPEA 71
           AA+   L+LKLN+          SPS  +++   S  SS  S E E            EA
Sbjct: 5   AASNLGLDLKLNI----------SPSLDSSLLTESSSSSLCSEEAE--------GGGGEA 64

Query: 72  TSMMLVGCPRCLMYVMLS-EEDPKCPKCKSTVLLDVLHDNSAVKT 116
            SM++VGCP C+MY++ S E DP+CP+C S VLLD L  N + K+
Sbjct: 65  KSMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]

BLAST of Carg10502 vs. ExPASy TrEMBL
Match: A0A6J1EGT8 (uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC111433248 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
           GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 118

[Close]

BLAST of Carg10502 vs. ExPASy TrEMBL
Match: A0A6J1IMT5 (uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.1e-57
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
           GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVK RRN
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRRN 118

[Close]

BLAST of Carg10502 vs. ExPASy TrEMBL
Match: A0A5A7SGG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00770 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKTR+N
Sbjct: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of Carg10502 vs. ExPASy TrEMBL
Match: A0A0A0KHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKTR+N
Sbjct: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of Carg10502 vs. ExPASy TrEMBL
Match: A0A1S3CHA8 (uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.5e-47
Identity = 104/117 (88.89%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           MNRRNSGGGG  AA PKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM  
Sbjct: 1   MNRRNSGGGG--AATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM-- 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRR 118
              RYS+SPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKT +
Sbjct: 61  ---RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEK 110

[Close]

BLAST of Carg10502 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 148.3 bits (373), Expect = 3.9e-36
Identity = 82/118 (69.49%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 15  APKLELKLNLSPPRAN--RGVESPSRSATVSPTSPPSSCVSSEEEMTVGRVRYSSSPEAT 74
           +PKLELKLNLSPP ++  R V SPSRSAT SPTSPPSSCVSSE       VRYS+SPE T
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 75  SMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN------------SAVKTRRN 119
           SM+LVGCPRCLMYVMLSE+DPKCPKCKSTVLLD LH+N            S  KTRRN
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAASSGRKTRRN 122

[Close]

BLAST of Carg10502 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 7.7e-24
Identity = 63/115 (54.78%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60
           M+RRN  G       PKLEL+LNLSPP +     S  RS   S T+ PSSCVSSE     
Sbjct: 1   MSRRNKNG-------PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE----- 60

Query: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKT 116
                  +   TSM+LVGCPRCLMYVMLS++DPKCPKCKSTVLLD L +N+   T
Sbjct: 61  --TNQEENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAAT 101

[Close]

BLAST of Carg10502 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 8.2e-10
Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 12  AAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTVGRVRYSSSPEA 71
           AA+   L+LKLN+          SPS  +++   S  SS  S E E            EA
Sbjct: 5   AASNLGLDLKLNI----------SPSLDSSLLTESSSSSLCSEEAE--------GGGGEA 64

Query: 72  TSMMLVGCPRCLMYVMLS-EEDPKCPKCKSTVLLDVLHDNSAVKT 116
            SM++VGCP C+MY++ S E DP+CP+C S VLLD L  N + K+
Sbjct: 65  KSMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91

[Close]

BLAST of Carg10502 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.7e-05
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 38  RSATVSPTSPPSSCVSSEEEMTVG-RVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCP 97
           RS +   +S  +SC++  EE+       +    EA  M+++GC  C+MYVM+ +E  +CP
Sbjct: 30  RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCP 89

Query: 98  KCKSTVLL 105
           KCK T L+
Sbjct: 90  KCKCTDLI 97

[Close]

BLAST of Carg10502 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 66  SSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVL 108
           +S+  A S +  GCP CL YV +++ +PKCP+C S V L  +
Sbjct: 207 ASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAM 248

The following BLAST results are available for this feature:

BLAST of Carg10502 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925998.1	4.9e-57	100.00	uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein ...	[more]
XP_022979077.1	1.9e-56	99.15	uncharacterized protein LOC111478822 [Cucurbita maxima]	[more]
XP_023543892.1	1.2e-55	99.16	uncharacterized protein LOC111803624 [Cucurbita pepo subsp. pepo]	[more]
XP_004143338.1	7.2e-48	89.83	uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacter...	[more]
XP_008462606.1	1.3e-46	88.89	PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo]	[more]

BLAST of Carg10502 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	5.5e-35	69.49	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	1.1e-22	54.78	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	1.2e-08	40.00	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg10502 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGT8	2.4e-57	100.00	uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC1114332...	[more]
A0A6J1IMT5	9.1e-57	99.15	uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822...	[more]
A0A5A7SGG8	3.5e-48	89.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KHJ4	3.5e-48	89.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1	[more]
A0A1S3CHA8	6.5e-47	88.89	uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=...	[more]

BLAST of Carg10502 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	3.9e-36	69.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	7.7e-24	54.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	8.2e-10	40.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	2.7e-05	36.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16500.1	1.4e-04	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR33177:SF40	SUBFAMILY NOT NAMED	coord: 1..117
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10502-RA	Carg10502-RA	mRNA