
Carg10417 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATACAAAAAAGAAAAAAAAAAACTTAAAAATGTAATACTCAGATTCAGAGTTAGCTTTATACATTAATTGATTGAAGTGAAATGGAATTTTATAGATCTTGATCAACTGCTGGATGATGTCGATGAATTAGGGAATTCCATGCAATAAACAATCTGCTAAATAGATGTGAAGTTTATCTTCTCATTATATATATAATTTTTTTGTTAGTCTTGTGTGGTTGTATACTAACAAATTTCATATCTAGTCAATAATCTGAAGCCTCTGTTTCCCCTCTCTTTCTTTATCCCTGTTTTTCCTTATCTTTAATCATGTATTCTTAAAGCACAGATGCCGAAGTTGATGAAAATTCTTTCAGACAGAATAGGGGATTACAATTGGGAAAGCCAAGTTCAGAGAGTAAATCTCAGGGATCAAGCAGGAGTGATACTGATGCTTTTGAAATATCAGAATTGTCAGCAACAATGGTAATGGAGGCTGAATTCAACAACACACCTGTTGAGAGGAGTTTGACTCGTGAGTTGTTCTCTGGTCTGAGGACCAGAGGTGGGTGTGCAACACCATTTGAAGGCAACATCTGTGATACGATACTTGATAATAATAATATCCATAAGTTCAATACTAACGAAAACTATCTTGAAAATGAGAAAATATCTGATGAAAATGTGAAGGGTGATATTGTGGCAAGCAAACTTGCCAGTTGCTCAAGAGAGAGGAGATTGCGCAAGCCTACACGAAGATACATAGAAGAATTTGCAGATTCGAAGTCTGAAAATAACAAGGGAAGGAGAAAACCTCCTACAAAAGATAAATACCTGAAAGTGACATCTACCGAGGAATCTAATCACATTAGACATAAGGTACAAATGTTGACCCCTAAAGATGAATCGCATTGTGGTACGTCTGTTCCAGTGCAGTCTCGATCTCAGAGAAGACATCCAGAGAAGCATGTACCAGTTTCAGTACGAGAGTTTTCTCTCTTGATATCTGTTCATCCTGCCAATATAATTATCATTGAAATTTCTCTGTTTTAACTGCCTTCCATATATTATTTGTTTTTTTTTTTTTTTTGTTTCTTTTTTGTGGTTCATTTGGTTTGGCCCAAAGTCTTTCTAGATTTAAAGTTGAAGCCACTTTATTGAAGTCATTCATGATGCCATATCTTTGTTTTATTTTTTTTTAAACACATTCAATTTTGTACACCCGTGTGAGTTGTAAATGGACAGTATAGGCACATCTTGTTGTATATGTATAGGCACATCTTTGATTGTTTCCTTTTTAGTAATAATTCAGATGATGATAATATTCATCACTCAGAATATAAATTTTGAATTGCAAAATGTTGGTTTTGATTGATTTCTAAATAGTTTGACCTCAAATATGTGGTGCATCAAGAAATGATTGAACTCATCTCATCATAGGAATTAAAAGCTTTTAAGACTCGTGGTAAATTTAAGATGACTCAACTGCCTTTGACCGTGGACTTTCTTTTGTTTATATCTGGGGCCATTGCAGACCTGATACACTGGTGCTGGTGAAATACATTATTCTGATGTGCAGTTTTTACTGTCTGGTCTTCTGCCACTCCTTCCCGCTCACCCTTATTTCTTCTCTGTAATAATTCAGTTGCTTTTCTCCCCCCTCCCAACCCTCTGTGTCTTTTTCCTCTATTATATTTGTTTGTGCTCGAGACCCCAAATATACGCAACTAATTATGCTATAGTTTAGAATTGTAAGTTCTGCTATAGTTGAGAATTGTAAGTTCTTTCATTCTACATTTCAGGGATTTCTGTCTGAAGACGAACCTTCTGCAACTGAGTGTAAAAATGTTTATTCATCTGCCAAAATATGTAAAAAGTATGATAGGAGGAAGCACCAGAAGATGTGGACCCTTACTGAAGTAATGCGATTGGTTGATGGAATTGCTGAATATGGAACTGGCCGCTGGACTCGTATAAAGAGGCACCTATTTGCGTCTTCTCCTCATCGTACGCCCATAGATCTCAGGGTATTTATCCATACACTATTCTGATTACTTCACATTTATCCAATGAATTTTAGTTATCTCGTTTTCCCTTCAGGACAAATGGCGGAATCTTTTGAAAGCTAGCTGTGTTAACATACAGAACAGTAAAGGGGTGAGCGTTTTTGTTCTTTATGCTTCACCTTTCTAGTGAATGTGAACTGTGCATGCCATAGATGAACCTCTTAATGATTTTTTGTCCATGTTCTAATTCCAATGAATCTTTTGCATGCAAAGTAAATTTTTAGCATGCTTTAAGTCGGGTGAAAGAGTATTCAGTTACGGTTTTGTTTCAATTATACAGACTGAATGTAAGCAGCCACATGCCTCACGTCCACTGCCGAAGTCCCTTCTCCAACGTGTTTATGAGTTGGCCAATATATATCCATACCCGAAGGAGCGCAGTCCAAAACCAGTCAGAGAAGCTACACCTCCCATGTATCTTATTGAAAGTAACTCGTTGTCATTCAATTGGGGGCGGAAGAAGTATGAATGATATCTACATTGGAAGCAGCAGAAATGCCTTTGCAATGAAGTGTGGAAGTCTAAATAGTACTTACAATGAAAAGATCTCTGTTTCTGTTTTGACCCTTTTGTAACGGTGATATGCACTTGAAACTGGAAAGAAAATCTTCCATAATAAAAGCCGCGGAGCTAATTAACTAAGAAATCTAGTATCATCGATTCCATTTCCTCGTCTGTTTTATTTATTTTTTTTTTTTTAAATTTGGGTAAATCATAAAATATTTCATCTACATTTTCTAATA AAATACAAAAAAGAAAAAAAAAAACTTAAAAATGTAATACTCAGATTCAGAGTTAGCTTTATACATTAATTGATTGAAGTGAAATGGAATTTTATAGATCTTGATCAACTGCTGGATGATGTCGATGAATTAGGGAATTCCATGCAATAAACAATCTGCTAAATAGATGTGAAGTTTATCTTCTCATTATATATATAATTTTTTTGTTAGTCTTGTGTGGTTGTATACTAACAAATTTCATATCTAGTCAATAATCTGAAGCCTCTGTTTCCCCTCTCTTTCTTTATCCCTGTTTTTCCTTATCTTTAATCATGTATTCTTAAAGCACAGATGCCGAAGTTGATGAAAATTCTTTCAGACAGAATAGGGGATTACAATTGGGAAAGCCAAGTTCAGAGAGTAAATCTCAGGGATCAAGCAGGAGTGATACTGATGCTTTTGAAATATCAGAATTGTCAGCAACAATGGTAATGGAGGCTGAATTCAACAACACACCTGTTGAGAGGAGTTTGACTCGTGAGTTGTTCTCTGGTCTGAGGACCAGAGGTGGGTGTGCAACACCATTTGAAGGCAACATCTGTGATACGATACTTGATAATAATAATATCCATAAGTTCAATACTAACGAAAACTATCTTGAAAATGAGAAAATATCTGATGAAAATGTGAAGGGTGATATTGTGGCAAGCAAACTTGCCAGTTGCTCAAGAGAGAGGAGATTGCGCAAGCCTACACGAAGATACATAGAAGAATTTGCAGATTCGAAGTCTGAAAATAACAAGGGAAGGAGAAAACCTCCTACAAAAGATAAATACCTGAAAGTGACATCTACCGAGGAATCTAATCACATTAGACATAAGGTACAAATGTTGACCCCTAAAGATGAATCGCATTGTGGTACGTCTGTTCCAGTGCAGTCTCGATCTCAGAGAAGACATCCAGAGAAGCATGTACCAGTTTCAGGATTTCTGTCTGAAGACGAACCTTCTGCAACTGAGTGTAAAAATGTTTATTCATCTGCCAAAATATGTAAAAAGTATGATAGGAGGAAGCACCAGAAGATGTGGACCCTTACTGAAGTAATGCGATTGGTTGATGGAATTGCTGAATATGGAACTGGCCGCTGGACTCGTATAAAGAGGCACCTATTTGCGTCTTCTCCTCATCGTACGCCCATAGATCTCAGGGACAAATGGCGGAATCTTTTGAAAGCTAGCTGTGTTAACATACAGAACAGTAAAGGGACTGAATGTAAGCAGCCACATGCCTCACGTCCACTGCCGAAGTCCCTTCTCCAACGTGTTTATGAGTTGGCCAATATATATCCATACCCGAAGGAGCGCAGTCCAAAACCAGTCAGAGAAGCTACACCTCCCATGTATCTTATTGAAAGTAACTCGTTGTCATTCAATTGGGGGCGGAAGAAGTATGAATGATATCTACATTGGAAGCAGCAGAAATGCCTTTGCAATGAAGTGTGGAAGTCTAAATAGTACTTACAATGAAAAGATCTCTGTTTCTGTTTTGACCCTTTTGTAACGGTGATATGCACTTGAAACTGGAAAGAAAATCTTCCATAATAAAAGCCGCGGAGCTAATTAACTAAGAAATCTAGTATCATCGATTCCATTTCCTCGTCTGTTTTATTTATTTTTTTTTTTTTAAATTTGGGTAAATCATAAAATATTTCATCTACATTTTCTAATA ATGGTAATGGAGGCTGAATTCAACAACACACCTGTTGAGAGGAGTTTGACTCGTGAGTTGTTCTCTGGTCTGAGGACCAGAGGTGGGTGTGCAACACCATTTGAAGGCAACATCTGTGATACGATACTTGATAATAATAATATCCATAAGTTCAATACTAACGAAAACTATCTTGAAAATGAGAAAATATCTGATGAAAATGTGAAGGGTGATATTGTGGCAAGCAAACTTGCCAGTTGCTCAAGAGAGAGGAGATTGCGCAAGCCTACACGAAGATACATAGAAGAATTTGCAGATTCGAAGTCTGAAAATAACAAGGGAAGGAGAAAACCTCCTACAAAAGATAAATACCTGAAAGTGACATCTACCGAGGAATCTAATCACATTAGACATAAGGTACAAATGTTGACCCCTAAAGATGAATCGCATTGTGGTACGTCTGTTCCAGTGCAGTCTCGATCTCAGAGAAGACATCCAGAGAAGCATGTACCAGTTTCAGGATTTCTGTCTGAAGACGAACCTTCTGCAACTGAGTGTAAAAATGTTTATTCATCTGCCAAAATATGTAAAAAGTATGATAGGAGGAAGCACCAGAAGATGTGGACCCTTACTGAAGTAATGCGATTGGTTGATGGAATTGCTGAATATGGAACTGGCCGCTGGACTCGTATAAAGAGGCACCTATTTGCGTCTTCTCCTCATCGTACGCCCATAGATCTCAGGGACAAATGGCGGAATCTTTTGAAAGCTAGCTGTGTTAACATACAGAACAGTAAAGGGACTGAATGTAAGCAGCCACATGCCTCACGTCCACTGCCGAAGTCCCTTCTCCAACGTGTTTATGAGTTGGCCAATATATATCCATACCCGAAGGAGCGCAGTCCAAAACCAGTCAGAGAAGCTACACCTCCCATGTATCTTATTGAAAGTAACTCGTTGTCATTCAATTGGGGGCGGAAGAAGTATGAATGA MVMEAEFNNTPVERSLTRELFSGLRTRGGCATPFEGNICDTILDNNNIHKFNTNENYLENEKISDENVKGDIVASKLASCSRERRLRKPTRRYIEEFADSKSENNKGRRKPPTKDKYLKVTSTEESNHIRHKVQMLTPKDESHCGTSVPVQSRSQRRHPEKHVPVSGFLSEDEPSATECKNVYSSAKICKKYDRRKHQKMWTLTEVMRLVDGIAEYGTGRWTRIKRHLFASSPHRTPIDLRDKWRNLLKASCVNIQNSKGTECKQPHASRPLPKSLLQRVYELANIYPYPKERSPKPVREATPPMYLIESNSLSFNWGRKKYE Homology
BLAST of Carg10417 vs. NCBI nr
Match: XP_022925803.1 (uncharacterized protein LOC111433102 isoform X2 [Cucurbita moschata]) HSP 1 Score: 661.4 bits (1705), Expect = 4.1e-186 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Carg10417 vs. NCBI nr
Match: XP_022925801.1 (uncharacterized protein LOC111433102 isoform X1 [Cucurbita moschata] >XP_022925802.1 uncharacterized protein LOC111433102 isoform X1 [Cucurbita moschata]) HSP 1 Score: 661.4 bits (1705), Expect = 4.1e-186 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Carg10417 vs. NCBI nr
Match: XP_022925805.1 (uncharacterized protein LOC111433102 isoform X3 [Cucurbita moschata]) HSP 1 Score: 661.4 bits (1705), Expect = 4.1e-186 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Carg10417 vs. NCBI nr
Match: KAG7034564.1 (Telomere repeat-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 661.4 bits (1705), Expect = 4.1e-186 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Carg10417 vs. NCBI nr
Match: KAG6604412.1 (Telomere repeat-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 658.3 bits (1697), Expect = 3.4e-185 Identity = 322/323 (99.69%), Postives = 322/323 (99.69%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy Swiss-Prot
Match: Q9C7B1 (Telomere repeat-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=TRP3 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10 Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy Swiss-Prot
Match: Q9FFY9 (Telomere repeat-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=TRP4 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.4e-10 Identity = 31/87 (35.63%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy Swiss-Prot
Match: Q9LL45 (Telomere-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TBP1 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 1.7e-09 Identity = 34/108 (31.48%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy Swiss-Prot
Match: Q9M347 (Telomere repeat-binding protein 6 OS=Arabidopsis thaliana OX=3702 GN=TRP6 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.9e-09 Identity = 30/87 (34.48%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy Swiss-Prot
Match: Q9SNB9 (Telomere repeat-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=TRP2 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.7e-09 Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy TrEMBL
Match: A0A6J1ECM4 (uncharacterized protein LOC111433102 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433102 PE=4 SV=1) HSP 1 Score: 661.4 bits (1705), Expect = 2.0e-186 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy TrEMBL
Match: A0A6J1EJ86 (uncharacterized protein LOC111433102 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111433102 PE=4 SV=1) HSP 1 Score: 661.4 bits (1705), Expect = 2.0e-186 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy TrEMBL
Match: A0A6J1EGA3 (uncharacterized protein LOC111433102 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433102 PE=4 SV=1) HSP 1 Score: 661.4 bits (1705), Expect = 2.0e-186 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy TrEMBL
Match: A0A6J1IK21 (uncharacterized protein LOC111477818 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477818 PE=4 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 2.6e-178 Identity = 315/323 (97.52%), Postives = 317/323 (98.14%), Query Frame = 0
BLAST of Carg10417 vs. ExPASy TrEMBL
Match: A0A6J1IIN6 (uncharacterized protein LOC111477818 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477818 PE=4 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 2.6e-178 Identity = 315/323 (97.52%), Postives = 317/323 (98.14%), Query Frame = 0
BLAST of Carg10417 vs. TAIR 10
Match: AT2G37025.1 (TRF-like 8 ) HSP 1 Score: 129.8 bits (325), Expect = 4.0e-30 Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 0
BLAST of Carg10417 vs. TAIR 10
Match: AT2G37025.2 (TRF-like 8 ) HSP 1 Score: 129.8 bits (325), Expect = 4.0e-30 Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 0
BLAST of Carg10417 vs. TAIR 10
Match: AT1G72650.1 (TRF-like 6 ) HSP 1 Score: 102.1 bits (253), Expect = 8.8e-22 Identity = 80/271 (29.52%), Postives = 122/271 (45.02%), Query Frame = 0
BLAST of Carg10417 vs. TAIR 10
Match: AT1G72650.2 (TRF-like 6 ) HSP 1 Score: 102.1 bits (253), Expect = 8.8e-22 Identity = 80/271 (29.52%), Postives = 122/271 (45.02%), Query Frame = 0
BLAST of Carg10417 vs. TAIR 10
Match: AT1G17460.1 (TRF-like 3 ) HSP 1 Score: 83.6 bits (205), Expect = 3.2e-16 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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