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Carg10411 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAGAAACAATCCCTCAACCGGCTGACAACGATCAGGAGGTGACCAACGCCGAAGACATGGAATTGGAGAACACAGAGCCCGGAGCAGAACCGAAAGGATCAAATGATGAAGCAAATGAGGCTGCAAAAGTAACTAATGGCGATGCAAAATTCGAAGCGGGAGAGGGAGGAAGAAAGCGCCGATGGCAGCGTCGAAGAGGTGAAAAAGCAGAAGATGGAGAAGTCAGTTGAAGAGGGAAGGGTTGAGAAGCGCAAGAGAGACGGGAAGGGAGAGGAGGAGCCTGGTCCTGTGACTATAGGCCCTAAGAGCTTTCGATCGTCGAGGGAATTGTTTGATCACTTCTATAAGTTCCTCCACCACTGGCCTGCCTACTTGAACGTGAACCAGGTTTCATATTATGGACTTCTTTTTAATTTGCTATCGTCCTCTGTTTTGTTAATTGAAAGGTTAAGTTGAGAATGATGCTTATGAAATTTTATGTTAGTTTTAGAACGCAGAGCTGGAACTTGATTGACATATTTTCTTTTTTCCCAATATTGCTGTTATGGTTTATCATCATCATTATTTTAATTTGTGAAAGTTACATCTTTTCTGAAGGGAAAACGAAATTGCAAAAGGAGGTGTAGATTTAGGTATCTTGATCCTCATGAATGGTGACAATTTTAGCAGGACTTTTTGTTCTAGTCACTTGTTTGAGAAACTGCTATAATTGTGTACATAATAGAATCAGAGAGGTGACATTCTTCAATATTCTCATGAGATTAATGATGATTGGTATCAGTTTTGCCCAAAATCCATTTACAGATTTAGATGTTAAAACAATTAATCAAAGAATCCCACCCTGGATGAATAAAATTTATTTCTATCTGTGAATCTACTGTCTTGACCTTATTTTCTCATTGAAGAATTTCTTTTAGCTGTTTTCTTTTTTTTTTCTCTTTTTTTTTTTTGCATTGTTTTGCTGTATTCTTTATGATTCCCTTCTTATTCTGATTTGATGTTAGTGGAAGAAATAGATATGCTATATCTTTTATTGCTTTCTTTCTAGCATATCCTGTGATGTAAGCAAATTTATACAATACAAGTATGGCTTTAACTCTTCAAAAAACGCATAGAGCCGCACCAAGCCATTGAGCATGTACTTTATATGGTATAATTTGCCAGCCCAAAAAGGGGAAGTAATAATTAGTGTTTAGAAATCCATGTATTCATGCCGGTTACAGCGGTAGGTGTGATCGCTTAGTTATGAAAAAATCCTTAAATTTGAAAGAACAAGTTGGGTGTTATTAATTTGTATTCAAATATTATTTTCTACTAACAGTCTATTCCTTTAGCACTTAGTGTAACAGCCCAAAACCAACCACCGCTAAGCCATATTGTCCTCTTTAGATTTTTCTTCAAGTTTTACGACGCATGTATAGGCAGGGCAGAGATTTCCACACCCTTATAAGGAATGTTGTTACTCCTCTTTTCAACTGATGTGAGATCTTTCACAATCCCACCTCCCCTTAGAGCCCGGCGTCTCGTTTGGCACACCATCCGATGTCTGGCTTTGATACCATTTGTAACCGCCCAAGCCCACCACTACAAATATTGTCCTCTTGGACTTTCTCTTTTGGGTTCCCTTCTAGGTTTTAAATGTGTTCTCTAGGAAGAGGTTTCACACTCTTGATAAGGAGATGTTTTCGTTTTTCTTTCCACTACGTGGGGGACCCTCACATTCACGCCTACGTTTTACCTTATAACTGGGTTAAATATAAGATCTTCTGTAGGTTGTATTATTATACCTTTGTGTGTGTTTAGTAATATTTTTTAAAAAAGTATTGCATTCTTTAGGGAGCTCCCAGTTTCGTGATCTCCTCTGTATTTCGTTGAAGCGTTCCGTCTACATGGTTTTTCGTTTTAATTATGTTACAAATCGCTTCGACATCAATTTATTGTTAATATACGGTGCTCTTATAAAACAATGTCCAAACAAACAAATTCCCACTTTTATGATACCTGCTATTAGACATTTTGCATTATGAAATAGACTATGTTTCTATATTAATAATATTACAAAATAATTACGTGCGTATTATGCATTTGAATTAAAGTTTAATGAATACTATGTAATTCATGAGTTTATAACATATTAATTCTGCCCATACCAATTAGTAGACGGTACAAGCTTGAATTCTGTTGTTCTTGTTGCATGTACTCTAACAAATTATGATTTGATATCAGGGTCTGTTGTTGTGGTCTCCCCGAGTTATCAGAGTAGAGTGCAATGTGGTTTACGGATTTCTTGTGCAACATGAAGGCTAA ATGGCAGAAGAAACAATCCCTCAACCGGCTGACAACGATCAGGAGGTGACCAACGCCGAAGACATGGAATTGGAGAACACAGAGCCCGGAGCAGAACCGAAAGGATCAAATGATGAAGCAAATGAGGCTGCAAAACGGGAGAGGGAGGAAGAAAGCGCCGATGGCAGCGTCGAAGAGGTGAAAAAGCAGAAGATGGAGAAGTCAGTTGAAGAGGGAAGGGTTGAGAAGCGCAAGAGAGACGGGAAGGGAGAGGAGGAGCCTGGTCCTGTGACTATAGGCCCTAAGAGCTTTCGATCGTCGAGGGAATTGTTTGATCACTTCTATAAGTTCCTCCACCACTGGCCTGCCTACTTGAACGTGAACCAGGGTCTGTTGTTGTGGTCTCCCCGAGTTATCAGAGTAGAGTGCAATGTGGTTTACGGATTTCTTGTGCAACATGAAGGCTAA ATGGCAGAAGAAACAATCCCTCAACCGGCTGACAACGATCAGGAGGTGACCAACGCCGAAGACATGGAATTGGAGAACACAGAGCCCGGAGCAGAACCGAAAGGATCAAATGATGAAGCAAATGAGGCTGCAAAACGGGAGAGGGAGGAAGAAAGCGCCGATGGCAGCGTCGAAGAGGTGAAAAAGCAGAAGATGGAGAAGTCAGTTGAAGAGGGAAGGGTTGAGAAGCGCAAGAGAGACGGGAAGGGAGAGGAGGAGCCTGGTCCTGTGACTATAGGCCCTAAGAGCTTTCGATCGTCGAGGGAATTGTTTGATCACTTCTATAAGTTCCTCCACCACTGGCCTGCCTACTTGAACGTGAACCAGGGTCTGTTGTTGTGGTCTCCCCGAGTTATCAGAGTAGAGTGCAATGTGGTTTACGGATTTCTTGTGCAACATGAAGGCTAA MAEETIPQPADNDQEVTNAEDMELENTEPGAEPKGSNDEANEAAKREREEESADGSVEEVKKQKMEKSVEEGRVEKRKRDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFLHHWPAYLNVNQGLLLWSPRVIRVECNVVYGFLVQHEG Homology
BLAST of Carg10411 vs. NCBI nr
Match: KAG7023192.1 (Protein EMBRYO DEFECTIVE, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 286.2 bits (731), Expect = 1.6e-73 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Carg10411 vs. NCBI nr
Match: KAG7023193.1 (Protein EMBRYO DEFECTIVE, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.5 bits (550), Expect = 1.6e-52 Identity = 119/131 (90.84%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of Carg10411 vs. NCBI nr
Match: KAG6589507.1 (Protein EMBRYO DEFECTIVE 514, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51 Identity = 118/131 (90.08%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Carg10411 vs. NCBI nr
Match: XP_022987201.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita maxima]) HSP 1 Score: 211.8 bits (538), Expect = 3.9e-51 Identity = 116/131 (88.55%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Carg10411 vs. NCBI nr
Match: XP_023515551.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 211.5 bits (537), Expect = 5.1e-51 Identity = 115/131 (87.79%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Carg10411 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.2e-06 Identity = 49/127 (38.58%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of Carg10411 vs. ExPASy TrEMBL
Match: A0A6J1JDH2 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita maxima OX=3661 GN=LOC111484822 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51 Identity = 116/131 (88.55%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Carg10411 vs. ExPASy TrEMBL
Match: A0A6J1E069 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111429642 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 9.3e-51 Identity = 116/131 (88.55%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of Carg10411 vs. ExPASy TrEMBL
Match: A0A6J1C0K4 (protein EMBRYO DEFECTIVE 514 OS=Momordica charantia OX=3673 GN=LOC111007244 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 8.2e-31 Identity = 87/135 (64.44%), Postives = 105/135 (77.78%), Query Frame = 0
BLAST of Carg10411 vs. ExPASy TrEMBL
Match: A0A6J1F569 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111440949 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 7.7e-29 Identity = 87/133 (65.41%), Postives = 99/133 (74.44%), Query Frame = 0
BLAST of Carg10411 vs. ExPASy TrEMBL
Match: A0A6J1IBL1 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita maxima OX=3661 GN=LOC111471455 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 6.5e-28 Identity = 86/133 (64.66%), Postives = 99/133 (74.44%), Query Frame = 0
BLAST of Carg10411 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) ) HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07 Identity = 49/127 (38.58%), Postives = 66/127 (51.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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