Carg10310 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAATAATGAATTTTCAGATTTCTGGATAATGGTAATCCCGTGGGACTAAGGGATATAGGCGCTGGATAAGCATTTGGACACTGTCCTCACTCCCGCCAAGTTCAGACTATAATCATGGAAGCTCTGGCGCTTCCTTCTATGAATTCTCTCACCATTTCCTGTTCTAATTTGCAGAAAGGGAGTTTCGCCAACTTGCCCGGAACACTGCATCACTGTAAATTTTACGGGCAATCTACCTTAAAGTTCAGGCCCCTTCATGGTACCCGCCACTATGTGCGTAATTCTTTACTGTTTTTTTTTTTTTTTCAATTTTGGTTGTGTTTGATTCTTTTCTTGGAGATCATTAAAGAAACCTAGAAAAGATTTGAAAGATTGCTGTCTTAATGAGGTCTTATTTCCTTCCGTGATCCATTTGTTTTTATAACGTCAATGTTTATTCCAGCAGTCCAAGATTATCAAAATGCAAAGTGACAGTGAAGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGACTCTCTGGTTGGTACCAACCGTTTGTTTTGTAATGGTATTGCTTTTTAGTCCTATGACTTAGAAGTTTGTTTGGTTGTAGTAACTAGAGGATCAATATTAATTGTTAGAGAAAATCTATCAATCTTGTAACAGTCATTTGGGATTTGGGATTCAACTTAATTTTGGAAAGCAACAAGTTATATGATATTTACATTGATTATTAACAAGTATGTTCGTTATGTCCTGATGGTTTAGTCATACTCTCCGAAGTTGAGTTTTTCAACCGCATTGTTTCTTGATTGCATTCTTTAAGTTTCCTGAATTGTTCATTCAAAAATTTTGTTTTTGGTAGTATGATTCGTAAATGTGTGCTGTTTAATGTGAACTAATCATTTATGTCTACAGATTCGGGAGGGCAAAGTGAAAGTTCTGACGCCAAGGGAAGCTGGTTATGCCATTCAACTCTCTGATAAGACATTGCTTGATGTGCGTCCTTCTACAGAACACCAAAAGGTAGACCACTGAGGTGTTTGTGATATCATATTTGTTCGTTGTTTGACTCTCCAACTTATGTTTCTCCCATGTTTTGAAGGCATGGGTTAAAGGCTCAACATGGATCCCAATCTTTGAAGTTGATGACAAAGTTGATCCTGGAACTCTTTCTCGAAAGGTCACAAGCTTCATGATGGGTACCATGAAACTCTTGCTATCTTTTCTTTAAATACCAAAGTCTAGTTCTCTGGTTGTCATTTTTGCAGCTTTCCATTCAGAGAAACAAATTACTTTTACTTAGTTTCCTTCTCATGGTTGCTAGTAAGATTAGTTAATCATACAAAGTAATGAGTATTACTGACCATGGAATGTGTGAGATCTCATATTGGTTGGAAAGGGGAACAAAGTATTCTTTATAAGGGTGTGGAAACCTTTCTCTAGTAGACATGTTTCAAAAGTCTTGAGAGTAAGCTCGAAAGAGAAAACCTAAAGAGAATAATATTTACCGCTTACTAACGGTAGATTTGAGTTGTTATTAGGATGAGTGAAATTTTTATTCTTTATTTTTTTATCGAGCTATTTTGGCAGTTAGTTCCTTACATTGTTCTTATATTTGCCTAGGGGGTTGGTGGAGTGGTGTGCCTACGGTATCCTACAATAGGTATAACGCAGGCCATAGCAATTCTTCTACTCCTTTTTTGTTTTTTGTTAATTATTTACCTTTTTCTTTGCCTGAACTTCAACAGCCGCTTCTTGTCAGAAGTTCAAGAGAAATTTCCAAAAGATGCTGACCTTATTCTTGCATGTCAAAAGGGATTGAGGTAATCTCCTTATTCTGATTGGGCTTGGAGGAAATGTTTGTAGACAGTCGATGCAGAGTTGTACACTGAGATTGCAACTTGGGATATAATGATTTCTTGATTTTCCATAACGGTTAATCTTGATGTGAGATCCCATGTCGGTTGAAGAGGAGAACAAAACATTCTTTATAAGAATGTAGAAACCTCTTCCTAGCAGATGTGTTTTAAAAATCATGAGGCTGACAGCAATACGTAACGGGCCAAAACCGAACAATATTTGCTAGCGGCGAACTTGGGCTGTTACAAATGGTATTAAAGCCAGACATCGAGCGGTATGTCAATGAGGACACTGGGCACATGGTGGAAGGGGGTGGGTTGTGAATCCCGCATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAACCTCTCCCTAATAGACACGTTTTAAAACTATGAAGTTGACCGCGATACGTAACGGCCCAAAACAGAGAATATCTATGAGTATGGAGTTCCACGTGATCTTCTTACTTCCATGTAACTAGTGAAGGAAAATTTGCTCAGCTAACTATAGTTGCAATGAAGTATACTGAACCCAGCAATAAGCAGCAGGTTAGAGTTATGATAACACATTGGGGGATGAAAGGATCGCACACATTGTTATTTTACTTGAAATGATTGGACCATGTAATCTTCTAGGATATCTCTCATCCAGCGTTGACTAATGTTATCGTGAATATACTAGTGTGGTATTGCTTTTCTTTGTATCAGACTTTCGCTAAAAGAATTAAACCAATGATATTGTTAATTACTTCAAAAAGACCAAATTGTAAGGAATTTATAATCTTGGCTGGGCTTCTTTCATCTGAACAACACTTTTGGAAGGTCCCTAGCTGCATGCGAGCTCCTCTACAATGCTGGTTACAAAAACCTCTTCTGGGTTCAAGGGGGTCTAGACGCTGCTGAAGAAGAGGTAACGATATTATTACTTTGAAGTTTCTACTTCCTCTCGCTGTTAATCCAGTCTGTAAAAGTGAAAATTTGGTGATGTCTATCATTTTACCTGGAACAGGATCTGGCCAGAGAAGGTCCTCAGCCTTTAAAATTTGCTGGGATTGGTGGGCTCTCAGAATTCCTTGGGTAACAGATGATTTCAACCTATTTTCTCCTTCAAAGGGCAAAAAGAACATATCAAATAGATTTAATTTACTCTGAAACTGCTTGTCTCTCTGTCGTCTGACTCACTTCCCGCATGACTTTCAGCTGGACCGATCAACAAAGGGTGGCTGGTGCCAAAGAAGGTTGGGGTTATCGCTTGGTCTACTCTGCTCGTCTGGTAATGTTTCATCTCGATGTATTAGTTAACTAGTTTTCAGTTTCATCTTAAACTTCTCCCTTAAGCCTCGTGTTTAATTATCATGGCACAGATTGCAGTCTTCCTTGCTGCTGATGCCCTGTTTATTGGCGCTCAGCAATTGGGTCGCTATATTCAAGACTTGCGGTCTCACTAAGGTCACTTACTGGGGTGGGTTGTGTAGTAGCATGAAACACATGAGAGACTAAGGTCTCTGAGGTTTTGGCTAGAGTAGAGAGTTCTGTGTGATGAGGATGCTTGGAATTAATTATATGTCTTGGAGAGATCTGCT CGAATAATGAATTTTCAGATTTCTGGATAATGGTAATCCCGTGGGACTAAGGGATATAGGCGCTGGATAAGCATTTGGACACTGTCCTCACTCCCGCCAAGTTCAGACTATAATCATGGAAGCTCTGGCGCTTCCTTCTATGAATTCTCTCACCATTTCCTGTTCTAATTTGCAGAAAGGGAGTTTCGCCAACTTGCCCGGAACACTGCATCACTGTAAATTTTACGGGCAATCTACCTTAAAGTTCAGGCCCCTTCATGGTACCCGCCACTATCAGTCCAAGATTATCAAAATGCAAAGTGACAGTGAAGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGACTCTCTGATTCGGGAGGGCAAAGTGAAAGTTCTGACGCCAAGGGAAGCTGGTTATGCCATTCAACTCTCTGATAAGACATTGCTTGATGTGCGTCCTTCTACAGAACACCAAAAGGCATGGGTTAAAGGCTCAACATGGATCCCAATCTTTGAAGTTGATGACAAAGTTGATCCTGGAACTCTTTCTCGAAAGCTTTCCATTCAGAGAAACAAATTACTTTTACTTAGTTTCCTTCTCATGGTTGCTAGGGGTTGGTGGAGTGGTGTGCCTACGGTATCCTACAATAGCCGCTTCTTGTCAGAAGTTCAAGAGAAATTTCCAAAAGATGCTGACCTTATTCTTGCATGTCAAAAGGGATTGAGGTCCCTAGCTGCATGCGAGCTCCTCTACAATGCTGGTTACAAAAACCTCTTCTGGGTTCAAGGGGGTCTAGACGCTGCTGAAGAAGAGGATCTGGCCAGAGAAGGTCCTCAGCCTTTAAAATTTGCTGGGATTGGTGGGCTCTCAGAATTCCTTGGCTGGACCGATCAACAAAGGGTGGCTGGTGCCAAAGAAGGTTGGGGTTATCGCTTGGTCTACTCTGCTCGTCTGATTGCAGTCTTCCTTGCTGCTGATGCCCTGTTTATTGGCGCTCAGCAATTGGGTCGCTATATTCAAGACTTGCGGTCTCACTAAGGTCACTTACTGGGGTGGGTTGTGTAGTAGCATGAAACACATGAGAGACTAAGGTCTCTGAGGTTTTGGCTAGAGTAGAGAGTTCTGTGTGATGAGGATGCTTGGAATTAATTATATGTCTTGGAGAGATCTGCT ATGGAAGCTCTGGCGCTTCCTTCTATGAATTCTCTCACCATTTCCTGTTCTAATTTGCAGAAAGGGAGTTTCGCCAACTTGCCCGGAACACTGCATCACTGTAAATTTTACGGGCAATCTACCTTAAAGTTCAGGCCCCTTCATGGTACCCGCCACTATCAGTCCAAGATTATCAAAATGCAAAGTGACAGTGAAGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGACTCTCTGATTCGGGAGGGCAAAGTGAAAGTTCTGACGCCAAGGGAAGCTGGTTATGCCATTCAACTCTCTGATAAGACATTGCTTGATGTGCGTCCTTCTACAGAACACCAAAAGGCATGGGTTAAAGGCTCAACATGGATCCCAATCTTTGAAGTTGATGACAAAGTTGATCCTGGAACTCTTTCTCGAAAGCTTTCCATTCAGAGAAACAAATTACTTTTACTTAGTTTCCTTCTCATGGTTGCTAGGGGTTGGTGGAGTGGTGTGCCTACGGTATCCTACAATAGCCGCTTCTTGTCAGAAGTTCAAGAGAAATTTCCAAAAGATGCTGACCTTATTCTTGCATGTCAAAAGGGATTGAGGTCCCTAGCTGCATGCGAGCTCCTCTACAATGCTGGTTACAAAAACCTCTTCTGGGTTCAAGGGGGTCTAGACGCTGCTGAAGAAGAGGATCTGGCCAGAGAAGGTCCTCAGCCTTTAAAATTTGCTGGGATTGGTGGGCTCTCAGAATTCCTTGGCTGGACCGATCAACAAAGGGTGGCTGGTGCCAAAGAAGGTTGGGGTTATCGCTTGGTCTACTCTGCTCGTCTGATTGCAGTCTTCCTTGCTGCTGATGCCCTGTTTATTGGCGCTCAGCAATTGGGTCGCTATATTCAAGACTTGCGGTCTCACTAA MEALALPSMNSLTISCSNLQKGSFANLPGTLHHCKFYGQSTLKFRPLHGTRHYQSKIIKMQSDSEDYELKQMRDMAAAKKRWDSLIREGKVKVLTPREAGYAIQLSDKTLLDVRPSTEHQKAWVKGSTWIPIFEVDDKVDPGTLSRKLSIQRNKLLLLSFLLMVARGWWSGVPTVSYNSRFLSEVQEKFPKDADLILACQKGLRSLAACELLYNAGYKNLFWVQGGLDAAEEEDLAREGPQPLKFAGIGGLSEFLGWTDQQRVAGAKEGWGYRLVYSARLIAVFLAADALFIGAQQLGRYIQDLRSH Homology
BLAST of Carg10310 vs. NCBI nr
Match: KAG7023092.1 (Rhodanese-like domain-containing protein 11, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 622.5 bits (1604), Expect = 2.0e-174 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of Carg10310 vs. NCBI nr
Match: XP_022921793.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161 Identity = 288/307 (93.81%), Postives = 293/307 (95.44%), Query Frame = 0
BLAST of Carg10310 vs. NCBI nr
Match: XP_023515575.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 575.9 bits (1483), Expect = 2.1e-160 Identity = 285/307 (92.83%), Postives = 292/307 (95.11%), Query Frame = 0
BLAST of Carg10310 vs. NCBI nr
Match: XP_022921794.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X2 [Cucurbita moschata]) HSP 1 Score: 573.5 bits (1477), Expect = 1.1e-159 Identity = 287/307 (93.49%), Postives = 292/307 (95.11%), Query Frame = 0
BLAST of Carg10310 vs. NCBI nr
Match: XP_022987243.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 571.2 bits (1471), Expect = 5.2e-159 Identity = 284/307 (92.51%), Postives = 290/307 (94.46%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 2.4e-106 Identity = 195/312 (62.50%), Postives = 239/312 (76.60%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.3e-23 Identity = 66/173 (38.15%), Postives = 93/173 (53.76%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.8e-16 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy Swiss-Prot
Match: Q94A65 (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g27700 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.1e-05 Identity = 49/205 (23.90%), Postives = 86/205 (41.95%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy TrEMBL
Match: A0A6J1E4U4 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429939 PE=4 SV=1) HSP 1 Score: 580.1 bits (1494), Expect = 5.5e-162 Identity = 288/307 (93.81%), Postives = 293/307 (95.44%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy TrEMBL
Match: A0A6J1E1J7 (rhodanese-like domain-containing protein 11, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429939 PE=4 SV=1) HSP 1 Score: 573.5 bits (1477), Expect = 5.1e-160 Identity = 287/307 (93.49%), Postives = 292/307 (95.11%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy TrEMBL
Match: A0A6J1JIW5 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484855 PE=4 SV=1) HSP 1 Score: 571.2 bits (1471), Expect = 2.5e-159 Identity = 284/307 (92.51%), Postives = 290/307 (94.46%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy TrEMBL
Match: A0A6J1JIC0 (rhodanese-like domain-containing protein 11, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484855 PE=4 SV=1) HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157 Identity = 283/307 (92.18%), Postives = 289/307 (94.14%), Query Frame = 0
BLAST of Carg10310 vs. ExPASy TrEMBL
Match: A0A5D3BJF1 (Rhodanese-like domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00970 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.9e-146 Identity = 258/307 (84.04%), Postives = 279/307 (90.88%), Query Frame = 0
BLAST of Carg10310 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 386.7 bits (992), Expect = 1.7e-107 Identity = 195/312 (62.50%), Postives = 239/312 (76.60%), Query Frame = 0
BLAST of Carg10310 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 110.2 bits (274), Expect = 3.1e-24 Identity = 66/173 (38.15%), Postives = 93/173 (53.76%), Query Frame = 0
BLAST of Carg10310 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 88.2 bits (217), Expect = 1.3e-17 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 0
BLAST of Carg10310 vs. TAIR 10
Match: AT4G27700.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 2.2e-06 Identity = 49/205 (23.90%), Postives = 86/205 (41.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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