Carg10270 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10270
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HVA22-like protein
Location	Carg_Chr10: 167686 .. 168814 (-)
RNA-Seq Expression	Carg10270
Synteny	Carg10270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCCATTCCCGGAGTTCGTTCCTTCTTGTAGCTTTCCTCCTCCTCCTTTATTTCATCCCGAACAGAGAAAACAGCCCCCGATTTGGTGTAGAAAATGAGTAGATTTTGGACGTTGGTCACTCAACTTCATACTCTTTCCGGGTGAGTATATATAAGCGGAACGCCTTCCTAACTTGGATGTTGGTTTTGTATTTTATGGCTAATTAGTTTGTAATTTTCGTTGTTGATGATTCCCGCAGGCCAGTTTTGATGTTGCTGTATCCACTGTAAGTTCATCTCTCTCTTTCTCCGTGTGATGCTGTGTTTCTATGTTGTCTCGATTTGATTTGAATCGTTCGCAAAACAACAGTTACGCGTCGGTGGTAGCCATCGAAAGCACATCCAAATTGGACGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTTACTCTCATGGAAATGGTTCTTCAGCCTGTATTAGAGTGGTCAGTGCTAGTTCTAGATGATTTCCCCCCCCCTTTTTTTTCTTTTTCTTTTCAGTTACATGATTTACTGAGGTTGAGAGATCAGATGGGGTTTTTGGTCGTTACTTAAACATACGTTAAAAAAAACTGAGGTAGTGTTTGAAATTTGCAGGATACCAGTTTGGTATTCGGTGAAATTAGTATTTGTGGCGTGGCTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGATAGATTCGTGAGGCAGCAAATAAAGAAATATGGTGGTATGGGAAGCAATTCTGCTGATGCCAAAGCCAAGAATCACTAATTCACATAATTATAGTGAGTTTTCTGCGCCCCTTCTCCTTTCATAATTATGATTACACTGGCCATTGTGAGCTAATTTCACTCATCTTTTTTGTAAAGAAGTCCTTCGTCATTTTCCACAAGTGCACTAATAAGATGTCTGTTCTTGTCTCCTTATGCGAACGGGATTAGGAAGGGAGGGAGCAGGAATCTTGATGAAGAATTCTATTGTAAAGAAGAGTTGGTTCCTTCGTGGTGGACCATCCTTGTGGATTTGACTTCTTTTGTCTCTTGTTTTCGTATGGTTATGTAAAAAAAGAACTTGTATTGGGCATATTTGTAAATGAAGCAACTCTTTTTTT

mRNA sequence

AATTCCCATTCCCGGAGTTCGTTCCTTCTTGTAGCTTTCCTCCTCCTCCTTTATTTCATCCCGAACAGAGAAAACAGCCCCCGATTTGGTGTAGAAAATGAGTAGATTTTGGACGTTGGTCACTCAACTTCATACTCTTTCCGGGCCAGTTTTGATGTTGCTGTATCCACTTTACGCGTCGGTGGTAGCCATCGAAAGCACATCCAAATTGGACGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTTACTCTCATGGAAATGGTTCTTCAGCCTGTATTAGAGTGGATACCAGTTTGGTATTCGGTGAAATTAGTATTTGTGGCGTGGCTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGATAGATTCGTGAGGCAGCAAATAAAGAAATATGGTGGTATGGGAAGCAATTCTGCTGATGCCAAAGCCAAGAATCACTAATTCACATAATTATAGATTAGGAAGGGAGGGAGCAGGAATCTTGATGAAGAATTCTATTGTAAAGAAGAGTTGGTTCCTTCGTGGTGGACCATCCTTGTGGATTTGACTTCTTTTGTCTCTTGTTTTCGTATGGTTATGTAAAAAAAGAACTTGTATTGGGCATATTTGTAAATGAAGCAACTCTTTTTTT

Coding sequence (CDS)

ATGAGTAGATTTTGGACGTTGGTCACTCAACTTCATACTCTTTCCGGGCCAGTTTTGATGTTGCTGTATCCACTTTACGCGTCGGTGGTAGCCATCGAAAGCACATCCAAATTGGACGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTTACTCTCATGGAAATGGTTCTTCAGCCTGTATTAGAGTGGATACCAGTTTGGTATTCGGTGAAATTAGTATTTGTGGCGTGGCTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGATAGATTCGTGAGGCAGCAAATAAAGAAATATGGTGGTATGGGAAGCAATTCTGCTGATGCCAAAGCCAAGAATCACTAA

Protein sequence

MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH

Homology

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BLAST of Carg10270 vs. NCBI nr
Match: XP_022921987.1 (HVA22-like protein e [Cucurbita moschata] >XP_022921988.1 HVA22-like protein e [Cucurbita moschata] >XP_022921989.1 HVA22-like protein e [Cucurbita moschata] >XP_022921990.1 HVA22-like protein e [Cucurbita moschata] >XP_022921991.1 HVA22-like protein e [Cucurbita moschata] >XP_023515539.1 HVA22-like protein e [Cucurbita pepo subsp. pepo] >XP_023515540.1 HVA22-like protein e [Cucurbita pepo subsp. pepo] >KAG6589370.1 HVA22-like protein d, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023053.1 HVA22-like protein d [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.0 bits (606), Expect = 4.1e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH
Sbjct: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 119

[Close]

BLAST of Carg10270 vs. NCBI nr
Match: XP_022988245.1 (HVA22-like protein e isoform X1 [Cucurbita maxima] >XP_022988246.1 HVA22-like protein e isoform X1 [Cucurbita maxima] >XP_022988247.1 HVA22-like protein e isoform X1 [Cucurbita maxima] >XP_022988248.1 HVA22-like protein e isoform X1 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MSRFWTLVTQLH LSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGG GSNSADAKAKNH
Sbjct: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH 119

[Close]

BLAST of Carg10270 vs. NCBI nr
Match: XP_022135186.1 (HVA22-like protein e [Momordica charantia])

HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTL+TQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLITQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QP+LEWIP+WYSVKLVFVAWLVLPQFKGAAFLY+RFVRQQIKKYGG+ S S D+KAKNH
Sbjct: 61  QPLLEWIPIWYSVKLVFVAWLVLPQFKGAAFLYERFVRQQIKKYGGVESKSPDSKAKNH 119

[Close]

BLAST of Carg10270 vs. NCBI nr
Match: XP_038879469.1 (HVA22-like protein e [Benincasa hispida] >XP_038879470.1 HVA22-like protein e [Benincasa hispida])

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 111/119 (93.28%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTL TQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMV+
Sbjct: 1   MSKFWTLATQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVI 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QP+LEWIPVWYSVKLVFVAWLVLPQFKGAAFLY+RFVRQQIKKY G+GSNS DAKAKNH
Sbjct: 61  QPILEWIPVWYSVKLVFVAWLVLPQFKGAAFLYERFVRQQIKKY-GVGSNSGDAKAKNH 118

[Close]

BLAST of Carg10270 vs. NCBI nr
Match: XP_004138037.1 (HVA22-like protein e [Cucumis sativus] >XP_031736094.1 HVA22-like protein e [Cucumis sativus] >KGN63469.1 hypothetical protein Csa_013331 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTL TQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLATQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QPVLEWIP+WYSVKLVFVAWLVLPQFKGAAFLY+RF R  IKKY G+G NSADAK KNH
Sbjct: 61  QPVLEWIPIWYSVKLVFVAWLVLPQFKGAAFLYERFARPHIKKY-GVGGNSADAKPKNH 118

[Close]

BLAST of Carg10270 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.0e-41
Identity = 76/105 (72.38%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M++ WT ++ LH+L+GPV+MLLYPLYASV+AIES SK+DDEQWLAYWI+YSFLTL E++L
Sbjct: 1   MTKLWTSLSALHSLAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYG 106
           Q +LEWIP+WY+ KLVFVAWLVLPQF+GAAF+Y++ VR+Q KKYG
Sbjct: 61  QSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQFKKYG 105

[Close]

BLAST of Carg10270 vs. ExPASy Swiss-Prot
Match: Q9S760 (HVA22-like protein d OS=Arabidopsis thaliana OX=3702 GN=HVA22D PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.2e-41
Identity = 77/118 (65.25%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M +FWT +T LH+ +GP++MLLYPLYASV+A+EST+K+DDEQWLAYWIIYSFL+L E++L
Sbjct: 1   MDKFWTFLTALHSGAGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKN 119
           Q ++EWIP+WY+VKLVFVAWLVLPQF+GAAF+Y+R VR+Q KK+G + S  +     N
Sbjct: 61  QSLIEWIPIWYTVKLVFVAWLVLPQFQGAAFIYNRVVREQFKKHGVLRSTHSKPTKPN 118

[Close]

BLAST of Carg10270 vs. ExPASy Swiss-Prot
Match: Q07764 (Protein HVA22 OS=Hordeum vulgare OX=4513 GN=HVA22 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.8e-40
Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M + W L+T LH+++GP + LLYPLYASV A+ES SK+DDEQWLAYWI+YSF+TL+EMV 
Sbjct: 1   MGKSWALLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVA 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           +PVL WIPVWY VKL+FVAWL LPQFKGA+F+YD+ VR+Q++KY G   N  DA  K H
Sbjct: 61  EPVLYWIPVWYPVKLLFVAWLALPQFKGASFIYDKVVREQLRKYRGRNRN-GDADHKVH 118

[Close]

BLAST of Carg10270 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.8e-24
Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 7   LVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEW 66
           +  +   L GP +MLLYPLYAS  AIES + LDD+QWL YWIIYS +T+ E+ +  VL W
Sbjct: 7   IAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAW 66

Query: 67  IPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIK---KYGGMGSNSADAKAK 118
           +P W  +KL+F  WLVLP F GAA++Y  FVRQ +K     GG G+N  D + +
Sbjct: 67  LPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGG-GTNYTDEQRR 119

[Close]

BLAST of Carg10270 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.9e-24
Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 7   LVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEW 66
           L+     L+GPV+ L+YPLYASV AIE+ S  DD+QWL YW++YS LTL+E+    ++EW
Sbjct: 12  LLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEW 71

Query: 67  IPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVR 99
           +P+W  +KL+   WLV+P F GAA++Y+ FVR
Sbjct: 72  LPIWSYMKLILTCWLVIPYFSGAAYVYEHFVR 103

[Close]

BLAST of Carg10270 vs. ExPASy TrEMBL
Match: A0A6J1E5B8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430077 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH
Sbjct: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 119

[Close]

BLAST of Carg10270 vs. ExPASy TrEMBL
Match: A0A6J1JJ20 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485557 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.9e-58
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MSRFWTLVTQLH LSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSRFWTLVTQLHILSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGG GSNSADAKAKNH
Sbjct: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGRGSNSADAKAKNH 119

[Close]

BLAST of Carg10270 vs. ExPASy TrEMBL
Match: A0A6J1BZX9 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111007214 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.0e-55
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTL+TQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLITQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QP+LEWIP+WYSVKLVFVAWLVLPQFKGAAFLY+RFVRQQIKKYGG+ S S D+KAKNH
Sbjct: 61  QPLLEWIPIWYSVKLVFVAWLVLPQFKGAAFLYERFVRQQIKKYGGVESKSPDSKAKNH 119

[Close]

BLAST of Carg10270 vs. ExPASy TrEMBL
Match: A0A0A0LR70 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G001410 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.0e-53
Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTL TQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLATQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QPVLEWIP+WYSVKLVFVAWLVLPQFKGAAFLY+RF R  IKKY G+G NSADAK KNH
Sbjct: 61  QPVLEWIPIWYSVKLVFVAWLVLPQFKGAAFLYERFARPHIKKY-GVGGNSADAKPKNH 118

[Close]

BLAST of Carg10270 vs. ExPASy TrEMBL
Match: A0A1S3CLE5 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103502305 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 107/119 (89.92%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           MS+FWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL
Sbjct: 1   MSKFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKNH 120
           QPVLEWIP+WYSVKLVF AWLVLPQFKGAAFLY+RF R  IKKY G+G +SADAK KNH
Sbjct: 61  QPVLEWIPIWYSVKLVFAAWLVLPQFKGAAFLYERFARPHIKKY-GVGGSSADAKPKNH 118

[Close]

BLAST of Carg10270 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E )

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-42
Identity = 76/105 (72.38%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M++ WT ++ LH+L+GPV+MLLYPLYASV+AIES SK+DDEQWLAYWI+YSFLTL E++L
Sbjct: 1   MTKLWTSLSALHSLAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYG 106
           Q +LEWIP+WY+ KLVFVAWLVLPQF+GAAF+Y++ VR+Q KKYG
Sbjct: 61  QSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQFKKYG 105

[Close]

BLAST of Carg10270 vs. TAIR 10
Match: AT4G24960.1 (HVA22 homologue D )

HSP 1 Score: 168.3 bits (425), Expect = 3.7e-42
Identity = 77/118 (65.25%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MSRFWTLVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVL 60
           M +FWT +T LH+ +GP++MLLYPLYASV+A+EST+K+DDEQWLAYWIIYSFL+L E++L
Sbjct: 1   MDKFWTFLTALHSGAGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELIL 60

Query: 61  QPVLEWIPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKN 119
           Q ++EWIP+WY+VKLVFVAWLVLPQF+GAAF+Y+R VR+Q KK+G + S  +     N
Sbjct: 61  QSLIEWIPIWYTVKLVFVAWLVLPQFQGAAFIYNRVVREQFKKHGVLRSTHSKPTKPN 118

[Close]

BLAST of Carg10270 vs. TAIR 10
Match: AT4G24960.3 (HVA22 homologue D )

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-35
Identity = 68/99 (68.69%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 20  MLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEWIPVWYSVKLVFVA 79
           MLLYPLYASV+A+EST+K+DDEQWLAYWIIYSFL+L E++LQ ++EWIP+WY+VKLVFVA
Sbjct: 1   MLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVA 60

Query: 80  WLVLPQFKGAAFLYDRFVRQQIKKYGGMGSNSADAKAKN 119
           WLVLPQF+GAAF+Y+R VR+Q KK+G + S  +     N
Sbjct: 61  WLVLPQFQGAAFIYNRVVREQFKKHGVLRSTHSKPTKPN 99

[Close]

BLAST of Carg10270 vs. TAIR 10
Match: AT4G24960.2 (HVA22 homologue D )

HSP 1 Score: 125.2 bits (313), Expect = 3.6e-29
Identity = 57/87 (65.52%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 32  IESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEWIPVWYSVKLVFVAWLVLPQFKGAAF 91
           +EST+K+DDEQWLAYWIIYSFL+L E++LQ ++EWIP+WY+VKLVFVAWLVLPQF+GAAF
Sbjct: 1   MESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVAWLVLPQFQGAAF 60

Query: 92  LYDRFVRQQIKKYGGMGSNSADAKAKN 119
           +Y+R VR+Q KK+G + S  +     N
Sbjct: 61  IYNRVVREQFKKHGVLRSTHSKPTKPN 87

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BLAST of Carg10270 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F )

HSP 1 Score: 111.7 bits (278), Expect = 4.1e-25
Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 7   LVTQLHTLSGPVLMLLYPLYASVVAIESTSKLDDEQWLAYWIIYSFLTLMEMVLQPVLEW 66
           +  +   L GP +MLLYPLYAS  AIES + LDD+QWL YWIIYS +T+ E+ +  VL W
Sbjct: 7   IAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAW 66

Query: 67  IPVWYSVKLVFVAWLVLPQFKGAAFLYDRFVRQQIK---KYGGMGSNSADAKAK 118
           +P W  +KL+F  WLVLP F GAA++Y  FVRQ +K     GG G+N  D + +
Sbjct: 67  LPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVKIGMNVGG-GTNYTDEQRR 119

The following BLAST results are available for this feature:

BLAST of Carg10270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921987.1	4.1e-59	100.00	HVA22-like protein e [Cucurbita moschata] >XP_022921988.1 HVA22-like protein e [...	[more]
XP_022988245.1	1.0e-57	98.32	HVA22-like protein e isoform X1 [Cucurbita maxima] >XP_022988246.1 HVA22-like pr...	[more]
XP_022135186.1	1.0e-54	91.60	HVA22-like protein e [Momordica charantia]	[more]
XP_038879469.1	1.4e-54	93.28	HVA22-like protein e [Benincasa hispida] >XP_038879470.1 HVA22-like protein e [B...	[more]
XP_004138037.1	1.7e-52	90.76	HVA22-like protein e [Cucumis sativus] >XP_031736094.1 HVA22-like protein e [Cuc...	[more]

BLAST of Carg10270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FED2	3.0e-41	72.38	HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1	[more]
Q9S760	5.2e-41	65.25	HVA22-like protein d OS=Arabidopsis thaliana OX=3702 GN=HVA22D PE=2 SV=1	[more]
Q07764	9.8e-40	65.55	Protein HVA22 OS=Hordeum vulgare OX=4513 GN=HVA22 PE=2 SV=1	[more]
Q682H0	5.8e-24	50.88	HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1	[more]
Q9S7V4	9.9e-24	52.17	HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1	[more]

BLAST of Carg10270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5B8	2.0e-59	100.00	HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430077 PE=3 SV=1	[more]
A0A6J1JJ20	4.9e-58	98.32	HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485557 PE=3 SV=1	[more]
A0A6J1BZX9	5.0e-55	91.60	HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111007214 PE=3 SV=1	[more]
A0A0A0LR70	8.0e-53	90.76	HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G001410 PE=3 SV=1	[more]
A0A1S3CLE5	3.1e-52	89.92	HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103502305 PE=3 SV=1	[more]

BLAST of Carg10270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50720.1	2.2e-42	72.38	HVA22 homologue E	[more]
AT4G24960.1	3.7e-42	65.25	HVA22 homologue D	[more]
AT4G24960.3	2.0e-35	68.69	HVA22 homologue D	[more]
AT4G24960.2	3.6e-29	65.52	HVA22 homologue D	[more]
AT2G42820.1	4.1e-25	50.88	HVA22-like protein F	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004345	TB2/DP1/HVA22-related protein	PFAM	PF03134	TB2_DP1_HVA22	coord: 24..99 e-value: 2.9E-27 score: 94.4
IPR004345	TB2/DP1/HVA22-related protein	PANTHER	PTHR12300	HVA22-LIKE PROTEINS	coord: 1..113
IPR031117	HVA22-like protein	PANTHER	PTHR12300:SF155	HVA22-LIKE PROTEIN	coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10270-RA	Carg10270-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0016021	integral component of membrane