Carg10269 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10269
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RecQ-mediated genome instability protein 1
Location	Carg_Chr10: 163123 .. 167190 (+)
RNA-Seq Expression	Carg10269
Synteny	Carg10269

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAGGAGGCGCCTTCGACTGAGCTGTTCTTCCGATGAAGACCACGAAAACGAAGACTTCGAACATGATCCTCAGTGCCCAGATTCCTCCACCACCTCTCTTCAGCCTCCCATTATCGACAATCTTAACTCTCATTTTAATCCCAACGTTTCTGAGCCCGTCCAACTTTCCGACGACGACGACGAACAAGATTTTATCGATGTCTCCGAACATCTCTCGCCTCCCTCTCCGGACTCTGATCATTCTCTCCGTCACTCGCCTGAGCCGAATCCTCATGTCGCTTCCCGCGAGCCGTCGTGTCCTGTGAGTGAGTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGCTGGATGCCTGTATCCGTGCCCATCATGGGTCTGTACCGGGTTTTTTGAGCCTCAACCCAGCAGAGAAAGGAAAGCTGTGTTTTGAGCAGTTTTTGGTTTCTGATATGAATTACGCGGGTGCTGGTGTCCTGCCCGAAAATGTTGATTCTATGCATCTCGTTGATCTCCCTGGTCCATACGTACTGCAGGTTATTTTTGCCGGTTCTTTGAGTTCATTCCCTTATATTAAAAATTTTCCCTTTTATTTGTTGTATCTAAGCTCATTGGCAGCTAAGCAAAATTTCAGAGATTATAAGAATGACCTACGGCTTGGGGTAGGCGCAATTGTAGAGTCCTTGCTGAGTTGTTTTCCATGTCAGGTCGATGAGATAGTTAACATCAGTTGTCCTCTAAAGGGTAGATATCAGACTGCCCCTGCGAGTATTAAGAGGTGCCTTAAGCTGTCTATGACGGATGGTGTTCAGCGAGTTTTTGGCATGGAATACAGGCCTATTAAGGGTCTTGAAGTTTTAGCACCTGCTGGGTTGAAGGTTTCTTAACTTCCTCAATCCTCGACCAATTGCTCTTTTCTTTCCCCAACTAGGTTTAGGTGCTTCTAGAATACTTGATTAGTTGATGTAGGGATCAATTATTTATAGTTTTTATACAGGTAGTGATCTGCAATGTAAGTGTACGGCGTGGGGTTCTAATGCTAGTTCCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAACTGGAGTCAGCTCGGCAGCGGCTGGTTGATGAAGTGAACAAGCCACCTAGAGGAAGGAGGTAACGTTGAGGCCAAGAGTACAAAGTTTTCATGGATGATTTCCTTTTCCACTGTCTAAAACTCGTTCTTTTATCTTTTGACATTGATTGCTTACAGACTTCAAATATGCACCATGTACTTGTATGGTCGAATTTGTTTCTCTTGGTCTTTCTCTTGAGCATAGCTTATTATGGCAGAATAATTCCATGCACTGTATTCTGTTATCGTAATTTGTGATTTTTATACTTGTTCAGAACGAGGACAGGCGTGGTTCCTCCCTTGGCAACTAGAGCCACACATGCCGCATGGCCATCGGACACTGTTCCAGAGCCCGTGCACTCTAGCAGAATAGTGGATACTGAACCTTCTCGTTCAGACCAAGGTACTAATCGGTTAAATATTCTCCTTCCTTTCTTCCCGGGACAAAAGAAAGATTTTTTTACATTGTTAACTGGACGTTGAATAAGATAGCAAACCTGGTATGATGTTCTATATGTCGGATTCCTGGACTTTAGTGACCTGAGCCACTACTACTTTATATCTTGAACTGGACAATGTTATCTAGTTTCAATCTCTTAATATGTTTCATTTCTGTTCTAGTCTGTTTCAACTATTGATACAGACCATAGTGGGGCAAAACAGGATGGAACAAGAACAGGAAGAGATGGAAGAGGAAGAAAAATGGATGTCCACTCTTAATTCATCAATACCCAATTCATTCTGAAATAAAAAGCATTATAGAATTCAAAGTAGGAAGAACAAAAATCCTACTAGAATCCGACGCAGATCTCAGGGTCAATTACACTAGGCATTTGGTATTTGTCCCTGGATTAGCTATGAGTACTGGCCAAGTTTATCTTGGATGCAAGTTTTGTTTTATTTATTTATTTGGTCTGGAATTTCATGCAATCTGTGTAAACTGGAAAGATCTCTGTTGTTTTGGACCGTGCATTCTTCCAAATTTTCTCTGTTTTCATACTTTTTATTTCCAGAAATCAATATGACACTGGTGCTCATTTGACTATCAGGTGTTCACATGTTCCATAGGGGAAATGAAGCAGTCACTGCTCCAGTTAGTGATGCATTTACTACCCCAGTCGGCAGACCAAATGCGAATTCTGAGCTATCTACTAATTTTGTTTCAAATGTTGAGGAGGTTCATTTACATTCCGTTCCCAGTAGTAGAGCTAGAACTGTGTCTACTATTATGTCCAATTCAATAGAGGATACCAATACGGTCAATTCGATAGAAGGCACCAATATGGTCAATTCCGTAGAGGACACCGATATGGTTGATATTGAGCATCCACTCATTTTATCTGGTGATAGGGAAATGCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTGGGCATCAGGGAAGGAAAAATCTCCATCAGTTCGTGGAAAAATCAAGGTAGGAAGAAAAGTTCATATTTCATGACTAGATGACTAAACACTTCTTGTCCCAAAAGAAAGCAGGACATTTTTCTTGTATGTAAAAGCTGTAAGTTCATTGTTGAAGCTTAAAATTTAGTTCATCAATCCGCTGGTCAGATTAATTGTTAGATAACTAACTTGTAAGTAATACGGTCAATATATGTGCAACTTATAGACAGTATTAGATGAACGTTCAATCTCATTCCTGTTTATCTCGAGTAGCACTGCTGAGGGTCAAGGAAATCCCGTACGTGGATGATGTGATATAATTGTAACTGGAAGCATGGAGTTGCATATCTGGCTGATCTATGTATAGAATTTGATGCTGGAGTATGCTAAGCATGATTTGTTGGAAAGAATCCTTTTTGTTCCTTTTGACTTAAGGGCTTGCAGCCTGCTCATATTGAATTATGTCGAGCGTAATGAATGAAAGTGAAATATGTAAATGGAATTTAATTCTCTTTATGTTACTTGCAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAGGCAAAGGACAACATACGATCTACATGCTTATGTGGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTGAGTCAAATACCATAGAGATCATGCTTACCCTAGTTAAGGAGAACCGTATCTGACCATTTATTATGCTGACTATTAGGCTGTACAGCAAGCGATTGGCCATTCTCCCAAGGATGTAACAGATGCTCTTGGTTCTTCTGATGTCAAAGTAGTGAGTGGCATGAAGGAGGCTTTGAGACAGTTTCAAATTTTCTTGGTAAATTTTGAGGTAAATTGATGGCATTAAGTATTTCCTCCCCTCCCGCTAACTTGAAAAAATAATGCCTTTTCTGTATTTGTGAGTATATTTTTAGTTAATTTAAGAATCGTTCTTTTATAACTTGTTTCATCAAAGGGTACAATGCTGGTTGAGATGAATAGAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGAGGAGGGTTGTCTGGAATCTGATGCTTGGCTGCTTTTGAGAAGACTCGAATGTTCGAATGCTGTTCAAACCGATGAGCATGCCCGTACAGACCCTATAGATGTGTCCCCTTAATTGAAGGCGAGAAGGAAAAGGGGTCTTGAGGCCAACGGCGTTGAAACTCATTTATATCGCAGCCTATATCTTGGACTGGGGATTAAGGCAGTAAAGCTTCCTTCGAGCCGACAGAATCTTGTTGACAGTGACAAATGAACAGAGCTTGATGGGCCGCAGATTCACATGAAATCCTATGCGATGCGGTCCGGTTGGATATAATTGCAAGCGGAATCAATGGTCTTATATAGGTCGTCATCAACACAGCATCCAGAGGTGGAACGAAGTCATTATTTTTCCTGGAAGCTTTACTCGGCCCAGTGGTCAGAGGAGAGCCTAAACTGATCAAGATTGGTATTCTTGTTGTGGTGGTGTTCATTTTGATCTAACCTATCAGGTTGGTTACCCATGGCAAGGAGAGAATTG

mRNA sequence

ATGCCCAGGAGGCGCCTTCGACTGAGCTGTTCTTCCGATGAAGACCACGAAAACGAAGACTTCGAACATGATCCTCAGTGCCCAGATTCCTCCACCACCTCTCTTCAGCCTCCCATTATCGACAATCTTAACTCTCATTTTAATCCCAACGTTTCTGAGCCCGTCCAACTTTCCGACGACGACGACGAACAAGATTTTATCGATGTCTCCGAACATCTCTCGCCTCCCTCTCCGGACTCTGATCATTCTCTCCGTCACTCGCCTGAGCCGAATCCTCATGTCGCTTCCCGCGAGCCGTCGTGTCCTGTGAGTGAGTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGCTGGATGCCTGTATCCGTGCCCATCATGGGTCTGTACCGGGTTTTTTGAGCCTCAACCCAGCAGAGAAAGGAAAGCTGTGTTTTGAGCAGTTTTTGGTTTCTGATATGAATTACGCGGGTGCTGGTGTCCTGCCCGAAAATGTTGATTCTATGCATCTCGTTGATCTCCCTGGTCCATACGTACTGCAGGTCGATGAGATAGTTAACATCAGTTGTCCTCTAAAGGGTAGATATCAGACTGCCCCTGCGAGTATTAAGAGGTGCCTTAAGCTGTCTATGACGGATGGTGTTCAGCGAGTTTTTGGCATGGAATACAGGCCTATTAAGGGTCTTGAAGTTTTAGCACCTGCTGGGTTGAAGGTAGTGATCTGCAATGTAAGTGTACGGCGTGGGGTTCTAATGCTAGTTCCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAACTGGAGTCAGCTCGGCAGCGGCTGGTTGATGAAGTGAACAAGCCACCTAGAGGAAGGAGAACGAGGACAGGCGTGGTTCCTCCCTTGGCAACTAGAGCCACACATGCCGCATGGCCATCGGACACTGTTCCAGAGCCCGTGCACTCTAGCAGAATAGTGGATACTGAACCTTCTCGTTCAGACCAAGGTGTTCACATGTTCCATAGGGGAAATGAAGCAGTCACTGCTCCAGTTAGTGATGCATTTACTACCCCAGTCGGCAGACCAAATGCGAATTCTGAGCTATCTACTAATTTTGTTTCAAATGTTGAGGAGGTTCATTTACATTCCGTTCCCAGTAGTAGAGCTAGAACTGTGTCTACTATTATGTCCAATTCAATAGAGGATACCAATACGGTCAATTCGATAGAAGGCACCAATATGGTCAATTCCGTAGAGGACACCGATATGGTTGATATTGAGCATCCACTCATTTTATCTGGTGATAGGGAAATGCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTGGGCATCAGGGAAGGAAAAATCTCCATCAGTTCGTGGAAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAGGCAAAGGACAACATACGATCTACATGCTTATGTGGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGCTGTACAGCAAGCGATTGGCCATTCTCCCAAGGATGTAACAGATGCTCTTGGTTCTTCTGATGTCAAAGTAGTGAGTGGCATGAAGGAGGCTTTGAGACAGTTTCAAATTTTCTTGGTAAATTTTGAGGGTACAATGCTGGTTGAGATGAATAGAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGAGGAGGGTTGTCTGGAATCTGATGCTTGGCTGCTTTTGAGAAGACTCGAATGTTCGAATGCTGTTCAAACCGATGAGCATGCCCGTACAGACCCTATAGATGTGTCCCCTTAATTGAAGGCGAGAAGGAAAAGGGGTCTTGAGGCCAACGGCGTTGAAACTCATTTATATCGCAGCCTATATCTTGGACTGGGGATTAAGGCAGTAAAGCTTCCTTCGAGCCGACAGAATCTTGTTGACAGTGACAAATGAACAGAGCTTGATGGGCCGCAGATTCACATGAAATCCTATGCGATGCGGTCCGGTTGGATATAATTGCAAGCGGAATCAATGGTCTTATATAGGTCGTCATCAACACAGCATCCAGAGGTGGAACGAAGTCATTATTTTTCCTGGAAGCTTTACTCGGCCCAGTGGTCAGAGGAGAGCCTAAACTGATCAAGATTGGTATTCTTGTTGTGGTGGTGTTCATTTTGATCTAACCTATCAGGTTGGTTACCCATGGCAAGGAGAGAATTG

Coding sequence (CDS)

ATGCCCAGGAGGCGCCTTCGACTGAGCTGTTCTTCCGATGAAGACCACGAAAACGAAGACTTCGAACATGATCCTCAGTGCCCAGATTCCTCCACCACCTCTCTTCAGCCTCCCATTATCGACAATCTTAACTCTCATTTTAATCCCAACGTTTCTGAGCCCGTCCAACTTTCCGACGACGACGACGAACAAGATTTTATCGATGTCTCCGAACATCTCTCGCCTCCCTCTCCGGACTCTGATCATTCTCTCCGTCACTCGCCTGAGCCGAATCCTCATGTCGCTTCCCGCGAGCCGTCGTGTCCTGTGAGTGAGTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGCTGGATGCCTGTATCCGTGCCCATCATGGGTCTGTACCGGGTTTTTTGAGCCTCAACCCAGCAGAGAAAGGAAAGCTGTGTTTTGAGCAGTTTTTGGTTTCTGATATGAATTACGCGGGTGCTGGTGTCCTGCCCGAAAATGTTGATTCTATGCATCTCGTTGATCTCCCTGGTCCATACGTACTGCAGGTCGATGAGATAGTTAACATCAGTTGTCCTCTAAAGGGTAGATATCAGACTGCCCCTGCGAGTATTAAGAGGTGCCTTAAGCTGTCTATGACGGATGGTGTTCAGCGAGTTTTTGGCATGGAATACAGGCCTATTAAGGGTCTTGAAGTTTTAGCACCTGCTGGGTTGAAGGTAGTGATCTGCAATGTAAGTGTACGGCGTGGGGTTCTAATGCTAGTTCCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAACTGGAGTCAGCTCGGCAGCGGCTGGTTGATGAAGTGAACAAGCCACCTAGAGGAAGGAGAACGAGGACAGGCGTGGTTCCTCCCTTGGCAACTAGAGCCACACATGCCGCATGGCCATCGGACACTGTTCCAGAGCCCGTGCACTCTAGCAGAATAGTGGATACTGAACCTTCTCGTTCAGACCAAGGTGTTCACATGTTCCATAGGGGAAATGAAGCAGTCACTGCTCCAGTTAGTGATGCATTTACTACCCCAGTCGGCAGACCAAATGCGAATTCTGAGCTATCTACTAATTTTGTTTCAAATGTTGAGGAGGTTCATTTACATTCCGTTCCCAGTAGTAGAGCTAGAACTGTGTCTACTATTATGTCCAATTCAATAGAGGATACCAATACGGTCAATTCGATAGAAGGCACCAATATGGTCAATTCCGTAGAGGACACCGATATGGTTGATATTGAGCATCCACTCATTTTATCTGGTGATAGGGAAATGCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTGGGCATCAGGGAAGGAAAAATCTCCATCAGTTCGTGGAAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAGGCAAAGGACAACATACGATCTACATGCTTATGTGGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGCTGTACAGCAAGCGATTGGCCATTCTCCCAAGGATGTAACAGATGCTCTTGGTTCTTCTGATGTCAAAGTAGTGAGTGGCATGAAGGAGGCTTTGAGACAGTTTCAAATTTTCTTGGTAAATTTTGAGGGTACAATGCTGGTTGAGATGAATAGAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGAGGAGGGTTGTCTGGAATCTGATGCTTGGCTGCTTTTGAGAAGACTCGAATGTTCGAATGCTGTTCAAACCGATGAGCATGCCCGTACAGACCCTATAGATGTGTCCCCTTAA

Protein sequence

MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANSELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP

Homology

[Close]

BLAST of Carg10269 vs. NCBI nr
Match: KAG7023052.1 (RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 595/595 (100.00%), Postives = 595/595 (100.00%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60
           MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60

Query: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120
           DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD
Sbjct: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120

Query: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180
           ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL
Sbjct: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180

Query: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240
           QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV
Sbjct: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240

Query: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300
           ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA
Sbjct: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300

Query: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360
           THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS
Sbjct: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360

Query: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420
           ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI
Sbjct: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420

Query: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480
           EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA
Sbjct: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480

Query: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540
           YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG
Sbjct: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540

Query: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP
Sbjct: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 595

[Close]

BLAST of Carg10269 vs. NCBI nr
Match: KAG6589368.1 (RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1179.5 bits (3050), Expect = 0.0e+00
Identity = 594/595 (99.83%), Postives = 594/595 (99.83%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60
           MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60

Query: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120
           DDEQDFIDVSEHLS PSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD
Sbjct: 61  DDEQDFIDVSEHLSRPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120

Query: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180
           ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL
Sbjct: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180

Query: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240
           QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV
Sbjct: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240

Query: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300
           ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA
Sbjct: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300

Query: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360
           THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS
Sbjct: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360

Query: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420
           ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI
Sbjct: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420

Query: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480
           EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA
Sbjct: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480

Query: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540
           YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG
Sbjct: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540

Query: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP
Sbjct: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 595

[Close]

BLAST of Carg10269 vs. NCBI nr
Match: XP_022921986.1 (recQ-mediated genome instability protein 1 [Cucurbita moschata])

HSP 1 Score: 1169.5 bits (3024), Expect = 0.0e+00
Identity = 588/595 (98.82%), Postives = 592/595 (99.50%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60
           MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60

Query: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120
           DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD
Sbjct: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120

Query: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180
           ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL
Sbjct: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180

Query: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240
           QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV
Sbjct: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240

Query: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300
           ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTG+VPPLATRA
Sbjct: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGMVPPLATRA 300

Query: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360
           THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPV R NANS
Sbjct: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVSRTNANS 360

Query: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420
           ELSTNFVSNVEEVHLHSVPSSR+RTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI
Sbjct: 361 ELSTNFVSNVEEVHLHSVPSSRSRTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420

Query: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480
           EHPLILSGDR+MPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA
Sbjct: 421 EHPLILSGDRKMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480

Query: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540
           YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG
Sbjct: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540

Query: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQT+EHAR DPIDVSP
Sbjct: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHARIDPIDVSP 595

[Close]

BLAST of Carg10269 vs. NCBI nr
Match: XP_023515609.1 (recQ-mediated genome instability protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1159.4 bits (2998), Expect = 0.0e+00
Identity = 584/595 (98.15%), Postives = 587/595 (98.66%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60
           MPRRRLRLSCSSDEDHENEDFEHDP CPDSS TSLQPPIIDNLNSHFNPNVSEPVQLSDD
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPHCPDSSATSLQPPIIDNLNSHFNPNVSEPVQLSDD 60

Query: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120
           DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSL REWLD
Sbjct: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLNREWLD 120

Query: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180
           ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL
Sbjct: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180

Query: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240
           QVDEIVNISCPLKGRYQT+PASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV
Sbjct: 181 QVDEIVNISCPLKGRYQTSPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240

Query: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300
           ICNV+VRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA
Sbjct: 241 ICNVTVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300

Query: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360
           THAAWPSDTVPEPV SSRIVD EPSRSDQGVHMFHRGNEAVTAPVSDAFTTPV R NANS
Sbjct: 301 THAAWPSDTVPEPVPSSRIVDAEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVSRTNANS 360

Query: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420
           ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI
Sbjct: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420

Query: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480
           EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA
Sbjct: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480

Query: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540
           YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG
Sbjct: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540

Query: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQT+EHAR DPIDVSP
Sbjct: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHARIDPIDVSP 595

[Close]

BLAST of Carg10269 vs. NCBI nr
Match: XP_022988244.1 (recQ-mediated genome instability protein 1 [Cucurbita maxima])

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 572/595 (96.13%), Postives = 582/595 (97.82%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60
           MPRRRLRLSCSSDED ENEDFEH PQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD
Sbjct: 1   MPRRRLRLSCSSDEDRENEDFEHYPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60

Query: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120
           DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNP+VAS EPSCPVSEFLRGLGLSLKR WLD
Sbjct: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPYVASCEPSCPVSEFLRGLGLSLKRAWLD 120

Query: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180
           ACIRAHHGS+PGFLSLNPA KGKLCFEQFLVSDMNYAGAGVLPENVDSMHL+DLPGPYVL
Sbjct: 121 ACIRAHHGSIPGFLSLNPAGKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLIDLPGPYVL 180

Query: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240
           QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV
Sbjct: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240

Query: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300
           ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLA RA
Sbjct: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLARRA 300

Query: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360
           THAAWPSDTV EPVHSSRIVDT PS SDQGVHMFHRGNEAVT+PV DAFTTPV R NA+S
Sbjct: 301 THAAWPSDTVQEPVHSSRIVDTAPSCSDQGVHMFHRGNEAVTSPVCDAFTTPVSRTNAHS 360

Query: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420
           ELSTNFVSNVEEVHLHSVPSSRARTVSTI+SNSIE+TNTVNSIEGTNMVNSVEDT+MVDI
Sbjct: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIVSNSIENTNTVNSIEGTNMVNSVEDTNMVDI 420

Query: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480
           EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA
Sbjct: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480

Query: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540
           YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDV+VVSGMKEALRQFQIFLVNFEG
Sbjct: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVQVVSGMKEALRQFQIFLVNFEG 540

Query: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQT+EHAR DPIDVSP
Sbjct: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHARLDPIDVSP 595

[Close]

BLAST of Carg10269 vs. ExPASy Swiss-Prot
Match: Q5XUX6 (RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMI1 PE=1 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.3e-127
Identity = 291/639 (45.54%), Postives = 387/639 (60.56%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEH---DPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQL 60
           M RRRL+L  SSDE+ E+E       D        +S+QP    +++S+ NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQPE--TSVSSNSNPNPGERIAI 60

Query: 61  SDDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKRE 120
           S    E + IDV  +  P  PDS     +   P+  V+  +   P+SE L  +G+ LKRE
Sbjct: 61  S----EVEIIDVFGNPQPTPPDSSIPTPYPVYPSESVSGNDYESPISEVLSRMGIKLKRE 120

Query: 121 WLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGP 180
           W  +C+     S+P F  L+ A K K CFEQF+  DMN  G GVLP NV SM+ ++L GP
Sbjct: 121 WWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIELAGP 180

Query: 181 YVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGL 240
           +VLQVDEIVNI CPLKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRPIK L+VLAPAGL
Sbjct: 181 FVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGL 240

Query: 241 KVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLA 300
           K+V+ +V VR G+LMLVPE  EVLGG+VEELE AR+RLV EVNKPPRG+RTR GVVP L 
Sbjct: 241 KIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRGKRTRVGVVPSLT 300

Query: 301 TRATHAAWP---SDT------VPEPVHSSRIVDTEPSRSDQGVHMF----HRGNEAVTAP 360
           TRAT AAW    +DT          V+SS   +   ++++QG+ +     H  + A+  P
Sbjct: 301 TRATLAAWSLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVTRTHNSSRAMDEP 360

Query: 361 VSDAFTTPVGRPNANSE-LSTNFVSNVEE---VHLHSVPSSRARTVST------------ 420
           ++   +T VG   +  E +  +  S   E     +HS  S+  R  ST            
Sbjct: 361 LA---STNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCSGACS 420

Query: 421 --------IMSNSIEDTNTVNSIEGTNMVNS--VEDTD------------------MVDI 480
                   +  NS++ T+ V S      +++  V DT                   +VD+
Sbjct: 421 GARSFANNVGGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDL 480

Query: 481 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 540
           E P +LS + E PFTYLA LS KWA  K+    V+G+IKCFLTGVK FQF+Q++TY+L  
Sbjct: 481 EGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLC 540

Query: 541 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSS-DVKVVSGMKEALRQFQIFLVNFE 579
           YVDDGSLI E+L+ ++ VQ+ IGHS  +VT AL SS    + + MKE L++FQ+FL +FE
Sbjct: 541 YVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKRFQLFLADFE 600

[Close]

BLAST of Carg10269 vs. ExPASy Swiss-Prot
Match: Q7XRV0 (RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RMI1 PE=3 SV=2)

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-97
Identity = 253/702 (36.04%), Postives = 342/702 (48.72%), Query Frame = 0


Query: 53  EPVQLSDDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNP-------------------- 112
           E  ++ D D +  F+D  EH+SPP P    +    P P P                    
Sbjct: 106 EVEEIEDPDGDSPFVDAPEHISPPPPPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLPA 165

Query: 113 HVASREPSCP---------------------------------VSEFLRGLGLSLKREWL 172
              +  PS P                                 V EFLRGLGL L+ EWL
Sbjct: 166 RTPTPTPSAPPRAAAPSPAGTPSPSPIPPSSTPVSALSGPLRQVDEFLRGLGLRLRPEWL 225

Query: 173 DACIRAHHGSVPGFLSLNPAE-KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPY 232
           ++C       VPGF  L   E   + CFEQFL +DMN  GAGVLPE V SMH   L GP 
Sbjct: 226 ESCA----AGVPGFYGLGGVEAMARRCFEQFLFADMNACGAGVLPEGVGSMHNAVLDGPL 285

Query: 233 VLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLK 292
           VLQVDEIVN+S PL+ RY+ A A  KRCLKLSMTDG+QR++GMEYRPIK LEVLAPAG K
Sbjct: 286 VLQVDEIVNLSAPLRERYRDAHAGPKRCLKLSMTDGIQRIYGMEYRPIKDLEVLAPAGFK 345

Query: 293 VVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLAT 352
           +VI NV +RRG+ MLVPE  E+LGG+ +EL+ AR RLV EVNKPPRG+R + G+  PL++
Sbjct: 346 IVIRNVHIRRGLFMLVPEVIEILGGVDDELDEARNRLVSEVNKPPRGKRKQGGL--PLSS 405

Query: 353 RATHAAWPSD-----------TVPEPV------------HSSRIVDT------------- 412
           RAT AAWP++           +VP  V            H+S++  T             
Sbjct: 406 RATLAAWPTNANATNDAEQGASVPRTVNTPHPTRLGNASHASQVGRTTQPMVDNLIPHVV 465

Query: 413 -----EPSRSDQGVHM------FHRGNEAVTA---------------------------- 472
                E SR  Q + M       +R N+  +A                            
Sbjct: 466 VSNAQEQSRHIQEITMQGQPTSLNRHNKEASASYRYNAQCSISGTTRAMADEHVLVSNAQ 525

Query: 473 ---------PVSDAFTTPVGRPNANSELSTNFVSNVE----------------------E 532
                     + D  T+  GR N  +  ST++  N +                       
Sbjct: 526 EQSPHIQEITMQDQSTSLNGR-NKEASASTSYRYNAQCSISGTTRAMADERVDPSFVGNN 585

Query: 533 VHL------------HSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVE------- 576
           VH             H   SS ++   ++ + S  D+       G     S E       
Sbjct: 586 VHEQMQRVQGITMQDHISASSESKRELSVTTPSGYDSRLAPHGVGNTGTRSGEATRSSNV 645

[Close]

BLAST of Carg10269 vs. ExPASy Swiss-Prot
Match: Q9H9A7 (RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 2.0e-16
Identity = 62/186 (33.33%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 118 WLDAC---IRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDL 177
           WL+AC   I+  + +V    +L+ A+  K  FEQ+L++D+      +LP+ +  +   +L
Sbjct: 26  WLEACINWIQEENNNV----NLSQAQMNKQVFEQWLLTDLRDLEHPLLPDGILEIPKGEL 85

Query: 178 PGPYVLQVDEIVNISCPLKGRYQ------------TAPASI---------KRCLKLSMTD 237
            G Y LQ++ +V++S P   + Q            TA A +          R L L +TD
Sbjct: 86  NGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTD 145

Query: 238 GVQRVFGMEYRPIKGLEVLAPAGLKVVIC-NVSVRRGVLMLVPEAFEVLGGLVEEL--ES 277
           G+ ++ GMEY+PI  L    P G K++I  N+S R GVL+L PE  +VLGG V+ L  E 
Sbjct: 146 GIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVLLLKPENVKVLGGEVDALLEEY 205

[Close]

BLAST of Carg10269 vs. ExPASy Swiss-Prot
Match: Q6DDH2 (RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.0e-16
Identity = 66/176 (37.50%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 118 WLDAC---IRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDL 177
           WL+AC   I+  +GS     SL  AE  K  FEQ+L++D+      VLP N+      +L
Sbjct: 27  WLEACINWIQEENGS-----SLLQAEINKQVFEQWLLTDLRDLEFPVLPANITDSLKCEL 86

Query: 178 PGPYVLQVDEIVNISCP-------LKGRYQTA--------------PASIKRCLKLSMTD 237
            G + +Q+D +V+IS P       LKG+  T                A   R L L +TD
Sbjct: 87  NGFHAVQMDSLVDISLPAYSQLQKLKGKDSTNEQVTCTTQQSQKPWEAKPTRMLMLQLTD 146

Query: 238 GVQRVFGMEYRPIKGLEVLAPAGLKVVICNVSV-RRGVLMLVPEAFEVLGGLVEEL 269
           G Q +  MEYRPI+ L      G K+V+    V R GVL+L PE  +VLGG VE L
Sbjct: 147 GTQHIQAMEYRPIQALNANLSPGTKMVLQGTIVCRLGVLLLKPENVKVLGGEVEAL 197

[Close]

BLAST of Carg10269 vs. ExPASy Swiss-Prot
Match: Q5ZHV8 (RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.9e-15
Identity = 67/220 (30.45%), Postives = 102/220 (46.36%), Query Frame = 0


Query: 118 WLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGP 177
           WL+ACI        G  +L+ A+  +  FEQ+L++D+      +LP+ +      +L G 
Sbjct: 26  WLEACINWIQEENGGG-NLSQAQISRQVFEQWLLTDLRDLEYPILPDGILDAPKGELSGF 85

Query: 178 YVLQVDEIVNISCPLKGRYQ------------TA---------PASIKRCLKLSMTDGVQ 237
           Y LQ+D ++++S P   + Q            TA          A   R L L +TDG+ 
Sbjct: 86  YSLQIDSLLDVSQPAYSQLQKIRGKSTVNEEVTANTQAFQKPWEAKPTRMLMLQLTDGIH 145

Query: 238 RVFGMEYRPIKGLEVLAPAGLKVVI-CNVSVRRGVLMLVPEAFEVLGGLVEEL------E 297
           ++ GMEY+P+  L    P G K+ +  NV+ R GVL+L PE  ++LGG V+ L      E
Sbjct: 146 QIQGMEYQPVPVLHSNLPPGTKITVHGNVAYRLGVLLLKPENVKLLGGEVDALLEEYSQE 205

Query: 298 SARQRLVDEVNKPPRGRRT-RTGVVPPLATRATHAAWPSD 309
               RL+ E   P   R+     +VP           PSD
Sbjct: 206 RVLARLLGEAENPDSVRQPGHEQIVPGPVDELGQTLGPSD 244

[Close]

BLAST of Carg10269 vs. ExPASy TrEMBL
Match: A0A6J1E2W4 (RecQ-mediated genome instability protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111430076 PE=3 SV=1)

HSP 1 Score: 1169.5 bits (3024), Expect = 0.0e+00
Identity = 588/595 (98.82%), Postives = 592/595 (99.50%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60
           MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60

Query: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120
           DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD
Sbjct: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120

Query: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180
           ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL
Sbjct: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180

Query: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240
           QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV
Sbjct: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240

Query: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300
           ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTG+VPPLATRA
Sbjct: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGMVPPLATRA 300

Query: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360
           THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPV R NANS
Sbjct: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVSRTNANS 360

Query: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420
           ELSTNFVSNVEEVHLHSVPSSR+RTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI
Sbjct: 361 ELSTNFVSNVEEVHLHSVPSSRSRTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420

Query: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480
           EHPLILSGDR+MPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA
Sbjct: 421 EHPLILSGDRKMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480

Query: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540
           YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG
Sbjct: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540

Query: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQT+EHAR DPIDVSP
Sbjct: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHARIDPIDVSP 595

[Close]

BLAST of Carg10269 vs. ExPASy TrEMBL
Match: A0A6J1JL11 (RecQ-mediated genome instability protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111485556 PE=3 SV=1)

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 572/595 (96.13%), Postives = 582/595 (97.82%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60
           MPRRRLRLSCSSDED ENEDFEH PQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD
Sbjct: 1   MPRRRLRLSCSSDEDRENEDFEHYPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSDD 60

Query: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKREWLD 120
           DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNP+VAS EPSCPVSEFLRGLGLSLKR WLD
Sbjct: 61  DDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPYVASCEPSCPVSEFLRGLGLSLKRAWLD 120

Query: 121 ACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVL 180
           ACIRAHHGS+PGFLSLNPA KGKLCFEQFLVSDMNYAGAGVLPENVDSMHL+DLPGPYVL
Sbjct: 121 ACIRAHHGSIPGFLSLNPAGKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLIDLPGPYVL 180

Query: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240
           QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV
Sbjct: 181 QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGLKVV 240

Query: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLATRA 300
           ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLA RA
Sbjct: 241 ICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLARRA 300

Query: 301 THAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRPNANS 360
           THAAWPSDTV EPVHSSRIVDT PS SDQGVHMFHRGNEAVT+PV DAFTTPV R NA+S
Sbjct: 301 THAAWPSDTVQEPVHSSRIVDTAPSCSDQGVHMFHRGNEAVTSPVCDAFTTPVSRTNAHS 360

Query: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDTDMVDI 420
           ELSTNFVSNVEEVHLHSVPSSRARTVSTI+SNSIE+TNTVNSIEGTNMVNSVEDT+MVDI
Sbjct: 361 ELSTNFVSNVEEVHLHSVPSSRARTVSTIVSNSIENTNTVNSIEGTNMVNSVEDTNMVDI 420

Query: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480
           EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA
Sbjct: 421 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 480

Query: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFLVNFEG 540
           YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDV+VVSGMKEALRQFQIFLVNFEG
Sbjct: 481 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVQVVSGMKEALRQFQIFLVNFEG 540

Query: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQT+EHAR DPIDVSP
Sbjct: 541 TMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHARLDPIDVSP 595

[Close]

BLAST of Carg10269 vs. ExPASy TrEMBL
Match: A0A6J1C0G7 (RecQ-mediated genome instability protein 1 OS=Momordica charantia OX=3673 GN=LOC111007213 PE=3 SV=1)

HSP 1 Score: 948.0 bits (2449), Expect = 1.9e-272
Identity = 485/600 (80.83%), Postives = 523/600 (87.17%), Query Frame = 0


Query: 1   MPRRRLRLSCSSD--EDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLS 60
           MPRRRLRLS SSD  ED ENED+E  PQCPDSST SLQP I+DNLNS+FNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60

Query: 61  DDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNP---HVASREPSCPVSEFLRGLGLSLK 120
            DDDEQDFIDVS+HLSPPSPDSDHSLRHSPE NP    VAS E SCPV++FLR LGLSLK
Sbjct: 61  -DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLK 120

Query: 121 REWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLP 180
           REWLDAC RA  GS+PGFLSLNP EKGKLCFEQFLVSDMNY+GAGVLPENVDSMHLVDLP
Sbjct: 121 REWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLP 180

Query: 181 GPYVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPA 240
           GPYVLQVDEIVNISCPL+GRYQTAPASIKRCLK+SMTDGVQRVFGMEYRPIK LEVLAPA
Sbjct: 181 GPYVLQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGVQRVFGMEYRPIKDLEVLAPA 240

Query: 241 GLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPP 300
           GLKVVICN SVR G+LMLVPEA EVLGGLVEELE+AR+RLVDEVNKPPRGRRTRTGVVPP
Sbjct: 241 GLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRLVDEVNKPPRGRRTRTGVVPP 300

Query: 301 LATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGR 360
           LA+RATHAAWPSD V  PV  +RIV TEP  SDQG+ MFHRGNEA+TAP  DAFTTPV R
Sbjct: 301 LASRATHAAWPSDAVQRPVQPNRIVSTEPPYSDQGLEMFHRGNEALTAPAGDAFTTPVSR 360

Query: 361 PNANSELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNMVNSVEDT 420
            NANSELS+N VSNVEE+H H VPSSRA T  TI+SNS+E+TN                 
Sbjct: 361 TNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVEETN----------------- 420

Query: 421 DMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTT 480
            MVDIEHPL+LSGDRE+PFTYLASLSAKWA+ KEKS SV G+IKCFLTGVKGFQFRQRTT
Sbjct: 421 -MVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQRTT 480

Query: 481 YDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEALRQFQIFL 540
           Y+LH YVDDGSLISEVLIDHE V++ IGH+PKDVTDAL SSDV+V S MK+ +RQFQ+FL
Sbjct: 481 YELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQVFL 540

Query: 541 VNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHARTDPIDVSP 596
           VNFEGTMLVEMN+TSSLPVVLEM+EGCLESDAWLLLRR +C NAVQT+EH   DPIDVSP
Sbjct: 541 VNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDVSP 581

[Close]

BLAST of Carg10269 vs. ExPASy TrEMBL
Match: A0A0A0LNV2 (RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G001400 PE=3 SV=1)

HSP 1 Score: 932.6 bits (2409), Expect = 8.4e-268
Identity = 487/608 (80.10%), Postives = 524/608 (86.18%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSD- 60
           M RRRLRLS SSD     ED E D  CPDSS TSLQP I+DNLNSHFNPNVSEPVQ+ D 
Sbjct: 1   MTRRRLRLSWSSD-----EDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDS 60

Query: 61  DDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHV---ASREPSCPVSEFLRGLGLSLKR 120
           DDDEQ FIDVS+HLSPPSPDSDHSL HSP+ NP +    S  P CPVS+FLRGLGLSLKR
Sbjct: 61  DDDEQHFIDVSDHLSPPSPDSDHSLPHSPDLNPLIPGLVSTHPPCPVSDFLRGLGLSLKR 120

Query: 121 EWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 180
           EWLDACIR+  GSVPGF SLN +EKGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDLPG
Sbjct: 121 EWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPG 180

Query: 181 PYVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAG 240
           PYVLQVDEIVNISC LKGRYQTAPA+IKRCLKLSMTDGVQR+FGMEYRPIK LEVLAPAG
Sbjct: 181 PYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAG 240

Query: 241 LKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPL 300
           LKVVI NVSVRRG+LMLVPEAFEVLGGLVEELE+AR+RLVDEVNKPPRG RTRTGVVP L
Sbjct: 241 LKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSL 300

Query: 301 ATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRP 360
           A+RAT AAWPSD V EP H SR+VD EPS S+QG  MFHRGNEA TAPV+DAFTTPV R 
Sbjct: 301 ASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRT 360

Query: 361 NANSELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIEDTNTVNSIEGTNM-------- 420
           NANSELS+NFVSNVEE+H HS+PS RA T  TI+ NS+ED++ VNS++ TNM        
Sbjct: 361 NANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNTNMGNSVDDSN 420

Query: 421 -VNSVEDTDMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKG 480
            VNSVEDT MVDIEHPLILSGDRE+PFTYLASLSAK A+ K+KSP VRG+IKCFLTGVKG
Sbjct: 421 AVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKG 480

Query: 481 FQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEA 540
           FQF++RT Y+L  YVDDGSLISEVLIDHE VQ+AIGHSPKDVTDA+ SSDVKVVS MKE 
Sbjct: 481 FQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKET 540

Query: 541 LRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHAR 596
           LRQFQIFL+NFEGTMLVEMNRTS LPVVLEM EGCLESDA LLLRRL CSN+V TDEHAR
Sbjct: 541 LRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHAR 600

[Close]

BLAST of Carg10269 vs. ExPASy TrEMBL
Match: A0A1S3CLI7 (RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=3 SV=1)

HSP 1 Score: 929.5 bits (2401), Expect = 7.1e-267
Identity = 489/608 (80.43%), Postives = 525/608 (86.35%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSD- 60
           M RRRLRLS SSD     ED E D  C DSS TSLQP I+DNLNSHFNPNVSEPVQ+ D 
Sbjct: 1   MTRRRLRLSSSSD-----EDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDS 60

Query: 61  DDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPN---PHVASREPSCPVSEFLRGLGLSLKR 120
           DDDEQ FIDVS+HLSPPSPDSDHSL HSP+PN   P +AS  P CPVS+FLRGLGLSLKR
Sbjct: 61  DDDEQHFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSLKR 120

Query: 121 EWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 180
           EWL ACIR+   SVPGF SLN + KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG
Sbjct: 121 EWLGACIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 180

Query: 181 PYVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAG 240
           PYVLQVDEIVNISC LKGRYQTAPA+IKRCLKLSMTDGVQRVFGMEYRPIK LEVLAPAG
Sbjct: 181 PYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAG 240

Query: 241 LKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPL 300
           LKVVI +VSVRRG+LMLVPEAFEVLGGLVEELE+AR+RLVDEVNKPPRGRRTRTGVVP L
Sbjct: 241 LKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSL 300

Query: 301 ATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVGRP 360
           A+RATHAAWPSD V EP HSSR+VD EPSRSDQG  +FHRGNEA +APV+DAFTTPV R 
Sbjct: 301 ASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRT 360

Query: 361 NANSELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSIE---------DTNTVNSIEGTN 420
           NANSELS+NFVSNVEE+  HS+PS RA    TI+ NS+E         DTNTVNS+  +N
Sbjct: 361 NANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSN 420

Query: 421 MVNSVEDTDMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKG 480
            VNSVEDT MVDIEHPLILSGDRE+PFTYLASLSAK A+ KEK PSVRG+IKCFLTGVKG
Sbjct: 421 AVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKG 480

Query: 481 FQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEA 540
           FQF+QRT Y+L  +VDDGSLISEVLID+E VQ+AIGHSPKDVTDA+ SSDVKVVS MKE 
Sbjct: 481 FQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKET 540

Query: 541 LRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTDEHAR 596
           LRQFQIFL+NFEGTMLVEMN+TSSLPVVLEM EGCLESDA LLLRRL CSNAV TDEHAR
Sbjct: 541 LRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHAR 600

[Close]

BLAST of Carg10269 vs. TAIR 10
Match: AT5G63540.1 (Domain of unknown function (DUF1767) )

HSP 1 Score: 458.4 bits (1178), Expect = 8.9e-129
Identity = 291/639 (45.54%), Postives = 387/639 (60.56%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEH---DPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQL 60
           M RRRL+L  SSDE+ E+E       D        +S+QP    +++S+ NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQPE--TSVSSNSNPNPGERIAI 60

Query: 61  SDDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKRE 120
           S    E + IDV  +  P  PDS     +   P+  V+  +   P+SE L  +G+ LKRE
Sbjct: 61  S----EVEIIDVFGNPQPTPPDSSIPTPYPVYPSESVSGNDYESPISEVLSRMGIKLKRE 120

Query: 121 WLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGP 180
           W  +C+     S+P F  L+ A K K CFEQF+  DMN  G GVLP NV SM+ ++L GP
Sbjct: 121 WWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIELAGP 180

Query: 181 YVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGL 240
           +VLQVDEIVNI CPLKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRPIK L+VLAPAGL
Sbjct: 181 FVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGL 240

Query: 241 KVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPLA 300
           K+V+ +V VR G+LMLVPE  EVLGG+VEELE AR+RLV EVNKPPRG+RTR GVVP L 
Sbjct: 241 KIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRGKRTRVGVVPSLT 300

Query: 301 TRATHAAWP---SDT------VPEPVHSSRIVDTEPSRSDQGVHMF----HRGNEAVTAP 360
           TRAT AAW    +DT          V+SS   +   ++++QG+ +     H  + A+  P
Sbjct: 301 TRATLAAWSLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVTRTHNSSRAMDEP 360

Query: 361 VSDAFTTPVGRPNANSE-LSTNFVSNVEE---VHLHSVPSSRARTVST------------ 420
           ++   +T VG   +  E +  +  S   E     +HS  S+  R  ST            
Sbjct: 361 LA---STNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCSGACS 420

Query: 421 --------IMSNSIEDTNTVNSIEGTNMVNS--VEDTD------------------MVDI 480
                   +  NS++ T+ V S      +++  V DT                   +VD+
Sbjct: 421 GARSFANNVGGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDL 480

Query: 481 EHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHA 540
           E P +LS + E PFTYLA LS KWA  K+    V+G+IKCFLTGVK FQF+Q++TY+L  
Sbjct: 481 EGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLC 540

Query: 541 YVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSS-DVKVVSGMKEALRQFQIFLVNFE 579
           YVDDGSLI E+L+ ++ VQ+ IGHS  +VT AL SS    + + MKE L++FQ+FL +FE
Sbjct: 541 YVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKRFQLFLADFE 600

[Close]

BLAST of Carg10269 vs. TAIR 10
Match: AT5G63540.2 (Domain of unknown function (DUF1767) )

HSP 1 Score: 439.1 bits (1128), Expect = 5.6e-123
Identity = 290/672 (43.15%), Postives = 386/672 (57.44%), Query Frame = 0


Query: 1   MPRRRLRLSCSSDEDHENEDFEH---DPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQL 60
           M RRRL+L  SSDE+ E+E       D        +S+QP    +++S+ NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQPE--TSVSSNSNPNPGERIAI 60

Query: 61  SDDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKRE 120
           S    E + IDV  +  P  PDS     +   P+  V+  +   P+SE L  +G+ LKRE
Sbjct: 61  S----EVEIIDVFGNPQPTPPDSSIPTPYPVYPSESVSGNDYESPISEVLSRMGIKLKRE 120

Query: 121 WLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGP 180
           W  +C+     S+P F  L+ A K K CFEQF+  DMN  G GVLP NV SM+ ++L GP
Sbjct: 121 WWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIELAGP 180

Query: 181 YVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAGL 240
           +VLQVDEIVNI CPLKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRPIK L+VLAPAGL
Sbjct: 181 FVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGL 240

Query: 241 KVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRR---------- 300
           K+V+ +V VR G+LMLVPE  EVLGG+VEELE AR+RLV EVNKPPRG+           
Sbjct: 241 KIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRGKSWKDYLQPVCF 300

Query: 301 -----------------------TRTGVVPPLATRATHAAWP---SDT------VPEPVH 360
                                  TR GVVP L TRAT AAW    +DT          V+
Sbjct: 301 TDFFGYSFFDLENRDWFGVCLTITRVGVVPSLTTRATLAAWSLNGNDTGNHVHDTGNHVN 360

Query: 361 SSRIVDTEPSRSDQGVHMF----HRGNEAVTAPVSDAFTTPVGRPNANSE-LSTNFVSNV 420
           SS   +   ++++QG+ +     H  + A+  P++   +T VG   +  E +  +  S  
Sbjct: 361 SSASGNASHTQANQGIPVHVTRTHNSSRAMDEPLA---STNVGATVSRVEHMQIDTASAH 420

Query: 421 EE---VHLHSVPSSRARTVST--------------------IMSNSIEDTNTVNSIEGTN 480
            E     +HS  S+  R  ST                    +  NS++ T+ V S     
Sbjct: 421 GERTFSDIHSTSSNIHRAASTAGTGTSCSGACSGARSFANNVGGNSLDQTSNVTSFVEEM 480

Query: 481 MVNS--VEDTD------------------MVDIEHPLILSGDREMPFTYLASLSAKWASG 540
            +++  V DT                   +VD+E P +LS + E PFTYLA LS KWA  
Sbjct: 481 HIDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWAVM 540

Query: 541 KEKSPSVRGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPK 579
           K+    V+G+IKCFLTGVK FQF+Q++TY+L  YVDDGSLI E+L+ ++ VQ+ IGHS  
Sbjct: 541 KDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLCYVDDGSLICEILLHNDVVQKRIGHSSM 600

The following BLAST results are available for this feature:

BLAST of Carg10269 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023052.1	0.0e+00	100.00	RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subs...	[more]
KAG6589368.1	0.0e+00	99.83	RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subs...	[more]
XP_022921986.1	0.0e+00	98.82	recQ-mediated genome instability protein 1 [Cucurbita moschata]	[more]
XP_023515609.1	0.0e+00	98.15	recQ-mediated genome instability protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022988244.1	0.0e+00	96.13	recQ-mediated genome instability protein 1 [Cucurbita maxima]	[more]

BLAST of Carg10269 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XUX6	1.3e-127	45.54	RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RM...	[more]
Q7XRV0	1.0e-97	36.04	RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9H9A7	2.0e-16	33.33	RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 ...	[more]
Q6DDH2	2.0e-16	37.50	RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=...	[more]
Q5ZHV8	4.9e-15	30.45	RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2...	[more]

BLAST of Carg10269 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2W4	0.0e+00	98.82	RecQ-mediated genome instability protein 1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JL11	0.0e+00	96.13	RecQ-mediated genome instability protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1C0G7	1.9e-272	80.83	RecQ-mediated genome instability protein 1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0LNV2	8.4e-268	80.10	RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G0...	[more]
A0A1S3CLI7	7.1e-267	80.43	RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC1035023...	[more]

BLAST of Carg10269 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63540.1	8.9e-129	45.54	Domain of unknown function (DUF1767)	[more]
AT5G63540.2	5.6e-123	43.15	Domain of unknown function (DUF1767)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033472	RecQ mediated genome instability protein, DUF1767	SMART	SM01161	DUF1767_2	coord: 104..197 e-value: 4.7E-30 score: 115.8
IPR013894	RecQ mediated genome instability protein, N-terminal	PFAM	PF08585	RMI1_N	coord: 111..198 e-value: 3.1E-12 score: 46.8 coord: 200..273 e-value: 1.5E-23 score: 83.7
IPR032199	Recq-mediated genome instability protein 1, C-terminal OB-fold domain	PFAM	PF16099	RMI1_C	coord: 432..574 e-value: 1.5E-34 score: 118.9
IPR042470	RecQ mediated genome instability protein, N-terminal, subdomain 2	GENE3D	2.40.50.770		coord: 153..278 e-value: 1.2E-28 score: 101.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR14790:SF15	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1	coord: 343..579 coord: 100..319
IPR039215	RecQ-mediated genome instability protein 1	PANTHER	PTHR14790	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1	coord: 343..579 coord: 100..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10269-RA	Carg10269-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0016604	nuclear body
cellular_component	GO:0031422	RecQ family helicase-topoisomerase III complex
molecular_function	GO:0000166	nucleotide binding