Carg10258 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10258
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ABC transporter F family member 4-like
Location	Carg_Chr10: 127371 .. 128342 (-)
RNA-Seq Expression	Carg10258
Synteny	Carg10258

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGTGGAAACTCCAAGCTGACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACTAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTTAGAGAGACAGCGCTGTCAAAGAAAGTGCTTCTCAAAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTCCTGTTCATAACAGGAACAGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTACACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCTCTTGGAACAACACAAACCCAATCACAATGGCACTCGGGTTGAATTGAAAGAAAATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAACAAGGAAGAAGGAGAAGAGGGTAGGCCTGACGACGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAACAAACACCAAATGAGAAACAAAATGGTAAGTAGGCTCAAAACAGAAGTTTCAACCCAAACAACCAAACCATTATGTGTATATTATGACCAACACAGTAGCAACATGTTTTACAGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCAGCAGTAGTACAAAATCTAACGAGGTGGGTCCACAGGATCATGTTTAGAAGATTTGGGATTTTTGTTATGTTGCTCTTATGAATCTTACACATACAGGGCCAGGAGAAGAAGACGATAAAGAAAGGAAAAGAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGTTGGTTTGAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGTTGTACCGGCAATGACAGAGGCAATCATCTAGCTAGAAAAGCTGAATGTTAA

mRNA sequence

ATGGGGTGTGGAAACTCCAAGCTGACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACTAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTTAGAGAGACAGCGCTGTCAAAGAAAGTGCTTCTCAAAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTCCTGTTCATAACAGGAACAGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTACACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCTCTTGGAACAACACAAACCCAATCACAATGGCACTCGGGTTGAATTGAAAGAAAATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAACAAGGAAGAAGGAGAAGAGGGTAGGCCTGACGACGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAACAAACACCAAATGAGAAACAAAATGTAGCAACATGTTTTACAGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCAGCAGTAGTACAAAATCTAACGAGGGCCAGGAGAAGAAGACGATAAAGAAAGGAAAAGAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGTTGGTTTGAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGTTGTACCGGCAATGACAGAGGCAATCATCTAGCTAGAAAAGCTGAATGTTAA

Coding sequence (CDS)

ATGGGGTGTGGAAACTCCAAGCTGACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACTAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTTAGAGAGACAGCGCTGTCAAAGAAAGTGCTTCTCAAAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTCCTGTTCATAACAGGAACAGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTACACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCTCTTGGAACAACACAAACCCAATCACAATGGCACTCGGGTTGAATTGAAAGAAAATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAACAAGGAAGAAGGAGAAGAGGGTAGGCCTGACGACGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAACAAACACCAAATGAGAAACAAAATGTAGCAACATGTTTTACAGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCAGCAGTAGTACAAAATCTAACGAGGGCCAGGAGAAGAAGACGATAAAGAAAGGAAAAGAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGTTGGTTTGAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGTTGTACCGGCAATGACAGAGGCAATCATCTAGCTAGAAAAGCTGAATGTTAA

Protein sequence

MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEENSILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENKTMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCFTVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPVGVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC

Homology

[Close]

BLAST of Carg10258 vs. NCBI nr
Match: KAG7023042.1 (hypothetical protein SDJN02_14064, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 547.7 bits (1410), Expect = 5.6e-152
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF
Sbjct: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
           TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV
Sbjct: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC 276
           GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC
Sbjct: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC 275

[Close]

BLAST of Carg10258 vs. NCBI nr
Match: XP_023516922.1 (uncharacterized protein LOC111780685 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.4 bits (1308), Expect = 3.7e-140
Identity = 261/275 (94.91%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNG+RVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQHKAVEEGDDENKEEGEEGRP++EDNRCLICPGSPSFRVYFVEQTPNEKQN     
Sbjct: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQN----- 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
            VEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKT KKG +GTTLNRAGSRKRPV
Sbjct: 181 -VEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC 276
           G VGLKSLLNVNNCCYHLSCTGND GNHLARKAEC
Sbjct: 241 G-VGLKSLLNVNNCCYHLSCTGNDSGNHLARKAEC 268

[Close]

BLAST of Carg10258 vs. NCBI nr
Match: XP_022921428.1 (uncharacterized protein LOC111429712 [Cucurbita moschata])

HSP 1 Score: 499.2 bits (1284), Expect = 2.3e-137
Identity = 258/275 (93.82%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENH DEHDSPNANHLLEQHKPN NGTRVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHMDEHDSPNANHLLEQHKPNDNGTRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQ  AVEEGDDENKEEGEEGRPD+EDNRCLICPGSPSFRVYFVEQTPN+KQN     
Sbjct: 121 TMNNQRTAVEEGDDENKEEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNDKQN----- 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
            VEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQE KTIKKGK+GTTLNRAGSR+RPV
Sbjct: 181 -VEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQENKTIKKGKKGTTLNRAGSRERPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC 276
           G VGLKSLLNVNNCCYHLSCTGNDR NHLARKAEC
Sbjct: 241 G-VGLKSLLNVNNCCYHLSCTGNDRVNHLARKAEC 268

[Close]

BLAST of Carg10258 vs. NCBI nr
Match: XP_022988604.1 (uncharacterized protein LOC111485806 isoform X1 [Cucurbita maxima])

HSP 1 Score: 489.2 bits (1258), Expect = 2.3e-134
Identity = 253/274 (92.34%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NGTRV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQHKAVEEGDDE+K EGEEGRPD+EDNRCLICPGSPSFRVYFVEQTPNEKQN   C 
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQN--ACC 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
           TVEMNDDGDMEDASLKKSPSRDSVES+SSTKSNE QEKKTIKKGK+GTTLNRAGSRKRPV
Sbjct: 181 TVEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAE 275
           G VGLKSLLNVNNCCYHLSCTGNDRGNHL  KAE
Sbjct: 241 G-VGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAE 271

[Close]

BLAST of Carg10258 vs. NCBI nr
Match: XP_022988605.1 (uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima])

HSP 1 Score: 482.6 bits (1241), Expect = 2.2e-132
Identity = 251/274 (91.61%), Postives = 258/274 (94.16%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NGTRV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQHKAVEEGDDE+K EGEEGRPD+EDNRCLICPGSPSFRVYFVEQTPNEKQN     
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQN----- 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
            VEMNDDGDMEDASLKKSPSRDSVES+SSTKSNE QEKKTIKKGK+GTTLNRAGSRKRPV
Sbjct: 181 -VEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAE 275
           G VGLKSLLNVNNCCYHLSCTGNDRGNHL  KAE
Sbjct: 241 G-VGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAE 267

[Close]

BLAST of Carg10258 vs. ExPASy TrEMBL
Match: A0A6J1E3W4 (uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC111429712 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137
Identity = 258/275 (93.82%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENH DEHDSPNANHLLEQHKPN NGTRVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHMDEHDSPNANHLLEQHKPNDNGTRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQ  AVEEGDDENKEEGEEGRPD+EDNRCLICPGSPSFRVYFVEQTPN+KQN     
Sbjct: 121 TMNNQRTAVEEGDDENKEEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNDKQN----- 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
            VEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQE KTIKKGK+GTTLNRAGSR+RPV
Sbjct: 181 -VEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQENKTIKKGKKGTTLNRAGSRERPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC 276
           G VGLKSLLNVNNCCYHLSCTGNDR NHLARKAEC
Sbjct: 241 G-VGLKSLLNVNNCCYHLSCTGNDRVNHLARKAEC 268

[Close]

BLAST of Carg10258 vs. ExPASy TrEMBL
Match: A0A6J1JM15 (uncharacterized protein LOC111485806 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485806 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 253/274 (92.34%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NGTRV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQHKAVEEGDDE+K EGEEGRPD+EDNRCLICPGSPSFRVYFVEQTPNEKQN   C 
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQN--ACC 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
           TVEMNDDGDMEDASLKKSPSRDSVES+SSTKSNE QEKKTIKKGK+GTTLNRAGSRKRPV
Sbjct: 181 TVEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAE 275
           G VGLKSLLNVNNCCYHLSCTGNDRGNHL  KAE
Sbjct: 241 G-VGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAE 271

[Close]

BLAST of Carg10258 vs. ExPASy TrEMBL
Match: A0A6J1JK15 (uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485806 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 251/274 (91.61%), Postives = 258/274 (94.16%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NGTRV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180
           TMNNQHKAVEEGDDE+K EGEEGRPD+EDNRCLICPGSPSFRVYFVEQTPNEKQN     
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQN----- 180

Query: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240
            VEMNDDGDMEDASLKKSPSRDSVES+SSTKSNE QEKKTIKKGK+GTTLNRAGSRKRPV
Sbjct: 181 -VEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPV 240

Query: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAE 275
           G VGLKSLLNVNNCCYHLSCTGNDRGNHL  KAE
Sbjct: 241 G-VGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAE 267

[Close]

BLAST of Carg10258 vs. ExPASy TrEMBL
Match: A0A5D3BHA4 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00270 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 169/305 (55.41%), Postives = 205/305 (67.21%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKL PEGE + P IRPLL R KF E RKRKNGTHLR+ ALSKKVLLKEGE EEEN
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICL----HTKQENHKDEHDSPN-----------------AN 120
           ++  V NR+       G T CL    HT     KDEH+S +                 +N
Sbjct: 61  AMF-VDNRHEC-----GSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 120

Query: 121 HLLEQHKPNHNGTR---------VELKENKTMNNQHKAVEEGDDENKEEGEEGRPDDEDN 180
            +LE+    H   +         +ELK++KTM N+HK ++EGD+ NK+EGE+GRPD+E+N
Sbjct: 121 RILEEEPRPHIQLKTTHPDDTPVLELKQDKTM-NEHKCIQEGDENNKKEGEDGRPDNEEN 180

Query: 181 R-CLICPGSPSFRVYFVEQTPNEKQNVATCFTVEMNDDGDMEDASLKKSPSRDSVESSSS 240
           R  +ICPGSPSFR YFVE+T ++K+       VEM D G M D S KKSPS DSVES++S
Sbjct: 181 RGSIICPGSPSFRFYFVEETQDDKEK------VEMKDAGGMGDVSHKKSPSHDSVESTTS 240

Query: 241 TKSNEGQEKKTIKKGKEGTTLNRAGSRKRPVGVVGLKSLLNVNNCCYHLSCTGNDRGNHL 275
            KS EGQE K IKKGK+GTT NR  S++RPV  VG+K+LLNV + CYHLSC+GNDR N L
Sbjct: 241 AKSGEGQENKVIKKGKKGTTFNRVISKRRPVS-VGVKNLLNVKS-CYHLSCSGNDRANLL 290

[Close]

BLAST of Carg10258 vs. ExPASy TrEMBL
Match: A0A1S3CLT6 (uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 169/305 (55.41%), Postives = 205/305 (67.21%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKL PEGE + P IRPLL R KF E RKRKNGTHLR+ ALSKKVLLKEGE EEEN
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  SILPVHNRNSIYGSHDGKTICL----HTKQENHKDEHDSPN-----------------AN 120
           ++  V NR+       G T CL    HT     KDEH+S +                 +N
Sbjct: 67  AMF-VDNRHEC-----GSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 126

Query: 121 HLLEQHKPNHNGTR---------VELKENKTMNNQHKAVEEGDDENKEEGEEGRPDDEDN 180
            +LE+    H   +         +ELK++KTM N+HK ++EGD+ NK+EGE+GRPD+E+N
Sbjct: 127 RILEEEPRPHIQLKTTHPDDTPVLELKQDKTM-NEHKCIQEGDENNKKEGEDGRPDNEEN 186

Query: 181 R-CLICPGSPSFRVYFVEQTPNEKQNVATCFTVEMNDDGDMEDASLKKSPSRDSVESSSS 240
           R  +ICPGSPSFR YFVE+T ++K+       VEM D G M D S KKSPS DSVES++S
Sbjct: 187 RGSIICPGSPSFRFYFVEETQDDKEK------VEMKDAGGMGDVSHKKSPSHDSVESTTS 246

Query: 241 TKSNEGQEKKTIKKGKEGTTLNRAGSRKRPVGVVGLKSLLNVNNCCYHLSCTGNDRGNHL 275
            KS EGQE K IKKGK+GTT NR  S++RPV  VG+K+LLNV + CYHLSC+GNDR N L
Sbjct: 247 AKSGEGQENKVIKKGKKGTTFNRVISKRRPVS-VGVKNLLNVKS-CYHLSCSGNDRANLL 296

[Close]

BLAST of Carg10258 vs. TAIR 10
Match: AT5G50830.2 (unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 14; Bacteria - 239; Metazoa - 1329; Fungi - 394; Plants - 197; Viruses - 79; Other Eukaryotes - 2498 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 88/310 (28.39%), Postives = 135/310 (43.55%), Query Frame = 0


Query: 1   MGCGNSKL------TPEGESILPM---IRPLLFRTKFAEFRKRKNGTHLR-ETALSKKVL 60
           MGCG S+L        E   ++P+   IRPLL R +  E +KR +   L+    LSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLL-RRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LK-----EGEIEEEN--------SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPN 120
           L+     +GE  EEN         + P  + N      + K   ++ K  +  D  +   
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAPAPDHNV-----EEKKEVIYEKIPSKDDVKEVKE 120

Query: 121 ANHLLEQHKPNHNGTRVELKENKTMNNQHKAVEEGDDEN------KEEGEEGRPDDED-- 180
              + +Q + NH+   VE +E +      K  EE  D++      K+EG++G+  D D  
Sbjct: 121 EVVVNKQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEG 180

Query: 181 -----NRCLICPGSPSFRVYFVEQTPNEKQNVATCFTVEMNDDGDMEDASLKKSPSRDSV 240
                +  +I PGSPSFRVY V+  P++          + +++ D+EDA  +KS   +SV
Sbjct: 181 SINNFDERMIGPGSPSFRVYCVD-VPSD----------DDDEEKDVEDA--RKSMETESV 240

Query: 241 ESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPVGVVGLKSLLNVNNCCY-HLSCTGN 274
             ++  K  +G   K  KK + G     A  R         K L NV   CY    C GN
Sbjct: 241 --TTEIKEVDGSIVKKEKKERRGKRFGIALPR---------KYLANVTAPCYAGGGCMGN 280

[Close]

BLAST of Carg10258 vs. TAIR 10
Match: AT5G50830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 4984 Blast hits to 3288 proteins in 342 species: Archae - 12; Bacteria - 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses - 77; Other Eukaryotes - 2621 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-05
Identity = 86/311 (27.65%), Postives = 136/311 (43.73%), Query Frame = 0


Query: 1   MGCGNSKL------TPEGESILPM---IRPLLFRTKFAEFRKRKNGTHLR-ETALSKKVL 60
           MGCG S+L        E   ++P+   IRPLL R +  E +KR +   L+    LSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLL-RRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LK-----EGEIEEEN--------SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPN 120
           L+     +GE  EEN         + P  + N      + K   ++ K  +  D  +   
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAPAPDHNV-----EEKKEVIYEKIPSKDDVKEVKE 120

Query: 121 ANHLLEQHKPNHNGTRVELKENKTMNNQHKAVEEGDDEN------KEEGEEGRPDDED-- 180
              + +Q + NH+   VE +E +      K  EE  D++      K+EG++G+  D D  
Sbjct: 121 EVVVNKQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEG 180

Query: 181 -----NRCLICPGSPSFRVYFVEQTPNEKQNVATCFTVEMNDDGDMEDASLKKSPSRDSV 240
                +  +I PGSPSFRVY V+  P++          + +++ D+EDA  +KS   +SV
Sbjct: 181 SINNFDERMIGPGSPSFRVYCVD-VPSD----------DDDEEKDVEDA--RKSMETESV 240

Query: 241 ESSSSTKSNEGQEKKTIKKGKE-GTTLNRAGSRKRPVGVVGLKSLLNVNNCCY-HLSCTG 274
            +      +  +++K  ++GK  G  L R             K L NV   CY    C G
Sbjct: 241 TTEIKEDGSIVKKEKKERRGKRFGIALPR-------------KYLANVTAPCYAGGGCMG 279

The following BLAST results are available for this feature:

BLAST of Carg10258 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023042.1	5.6e-152	100.00	hypothetical protein SDJN02_14064, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023516922.1	3.7e-140	94.91	uncharacterized protein LOC111780685 [Cucurbita pepo subsp. pepo]	[more]
XP_022921428.1	2.3e-137	93.82	uncharacterized protein LOC111429712 [Cucurbita moschata]	[more]
XP_022988604.1	2.3e-134	92.34	uncharacterized protein LOC111485806 isoform X1 [Cucurbita maxima]	[more]
XP_022988605.1	2.2e-132	91.61	uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg10258 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg10258 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3W4	1.1e-137	93.82	uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC1114297...	[more]
A0A6J1JM15	1.1e-134	92.34	uncharacterized protein LOC111485806 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JK15	1.1e-132	91.61	uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3BHA4	2.4e-68	55.41	ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CLT6	2.4e-68	55.41	uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=...	[more]

BLAST of Carg10258 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50830.2	2.2e-05	28.39	unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 1...	[more]
AT5G50830.1	6.4e-05	27.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10258-RA	Carg10258-RA	mRNA