Carg10170 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAACGCTCCGGGATCTCCGATCTTTGTATCACACTAGGCGCTCTCTCTCATTCTCCCCCAAATCTATCGAATTCGAACTGGAATTCATTTCTCTATGAGGACCGGAATGCGGTATTACGCCGGCGGCGAGGATCATCGGCAGGAATCTCATTTCCTCGAAGCTTGTTTTCTCTGCCGGAGGCCGCTCGGATTCAACAGAGACATTTTCATGTACAGGTGAGTGACTGCGATTCGAATTCGATTAATCGCTTCTCGATTTCAATTTCTAGGTTTTTGTTTTTGAATTTCGTTACTGACGGATTGGATTGGATTTCAGAGGAAATACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGATCGACGAAGCGCAGGAGAAGAGCTGGAGAATCTCGTCTTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGGATAAAACCGCGGCGTCTTGTAAGAAGAATGTGCGAACAGATACAGTTGCAGTGGCGTGA AAAACGCTCCGGGATCTCCGATCTTTGTATCACACTAGGCGCTCTCTCTCATTCTCCCCCAAATCTATCGAATTCGAACTGGAATTCATTTCTCTATGAGGACCGGAATGCGGTATTACGCCGGCGGCGAGGATCATCGGCAGGAATCTCATTTCCTCGAAGCTTGTTTTCTCTGCCGGAGGCCGCTCGGATTCAACAGAGACATTTTCATGTACAGAGGAAATACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGATCGACGAAGCGCAGGAGAAGAGCTGGAGAATCTCGTCTTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGGATAAAACCGCGGCGTCTTGTAAGAAGAATGTGCGAACAGATACAGTTGCAGTGGCGTGA ATGAGGACCGGAATGCGGTATTACGCCGGCGGCGAGGATCATCGGCAGGAATCTCATTTCCTCGAAGCTTGTTTTCTCTGCCGGAGGCCGCTCGGATTCAACAGAGACATTTTCATGTACAGAGGAAATACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGATCGACGAAGCGCAGGAGAAGAGCTGGAGAATCTCGTCTTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGGATAAAACCGCGGCGTCTTGTAAGAAGAATGTGCGAACAGATACAGTTGCAGTGGCGTGA MRTGMRYYAGGEDHRQESHFLEACFLCRRPLGFNRDIFMYRGNTPFCSKECRQEQIEIDEAQEKSWRISSSSSSSSSSSSSSADKTAASCKKNVRTDTVAVA Homology
BLAST of Carg10170 vs. NCBI nr
Match: KAG7013404.1 (hypothetical protein SDJN02_23570 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 197.6 bits (501), Expect = 5.2e-47 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Carg10170 vs. NCBI nr
Match: XP_023548734.1 (uncharacterized protein LOC111807300 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42 Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Carg10170 vs. NCBI nr
Match: KAG6574826.1 (FCS-Like Zinc finger 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42 Identity = 96/102 (94.12%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of Carg10170 vs. NCBI nr
Match: XP_023006470.1 (uncharacterized protein LOC111499186 [Cucurbita maxima]) HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41 Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Carg10170 vs. NCBI nr
Match: XP_022959227.1 (uncharacterized protein LOC111460275 [Cucurbita moschata]) HSP 1 Score: 178.3 bits (451), Expect = 3.3e-41 Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.0e-16 Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15 Identity = 51/100 (51.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.3e-10 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.4e-09 Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy TrEMBL
Match: A0A6J1L079 (uncharacterized protein LOC111499186 OS=Cucurbita maxima OX=3661 GN=LOC111499186 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41 Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy TrEMBL
Match: A0A6J1H3Y3 (uncharacterized protein LOC111460275 OS=Cucurbita moschata OX=3662 GN=LOC111460275 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41 Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy TrEMBL
Match: A0A0A0LHK0 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G118280 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39 Identity = 89/102 (87.25%), Postives = 93/102 (91.18%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy TrEMBL
Match: A0A6J1KJX8 (uncharacterized protein LOC111494701 OS=Cucurbita maxima OX=3661 GN=LOC111494701 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37 Identity = 84/102 (82.35%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Carg10170 vs. ExPASy TrEMBL
Match: A0A6J1HKB3 (uncharacterized protein LOC111464337 OS=Cucurbita moschata OX=3662 GN=LOC111464337 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37 Identity = 83/102 (81.37%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Carg10170 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 85.1 bits (209), Expect = 3.5e-17 Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of Carg10170 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 82.4 bits (202), Expect = 2.3e-16 Identity = 51/100 (51.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Carg10170 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Carg10170 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.1 bits (157), Expect = 3.8e-11 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Carg10170 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-10 Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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