Carg10116 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10116
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AWPM-19-like family protein
Location	Carg_Chr17: 734283 .. 735561 (-)
RNA-Seq Expression	Carg10116
Synteny	Carg10116

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTAAGTTTTGCTTTTCAAGGTTTGGAGTTATGTAATTCTTGGTGTCTTTTCAACCATTTTCTTTTTGATTATTTGATCATTTTCCGTCCTTGAGAATGTACCTAGCAAACTCATCGTTGGTAGATATTCGCCCTTTTTGGACTCGCTTCCGAGCTTAACTTCAAAGTTTTTAAAATGAAAAACGCTTATTTTAGGAAAACGCTCCCTAAGGTCTATAAAACCTTCTTCCAAGGATTCCAAGGAGTAAGGTATTTTCACACGCTTTTTCAAAGTTTTTTTTAGGATGCATCTGCTACGGGGAGATTTTAGGATGCTTTAAGATGTGTCTAGGAAGAGATTTTCCCGCACTTTTTTTTTTTTTTGAGGTCTTTAAAACATGTCTTCTGCGTGCTAGGGAGAGATTTTAGGACGCTTTAACACGTCTAGGAAGAGATTTTCACACGTTTTCCTCGTTAAAACACATTTGGTGGGGAGAGATTCTGTTTGTTCTTAGTGGGAAAAAAATGCAAAAGCTCTCTCTTAAACACAAATTGTCAGCTTTTACAAAAGCATGATTATGCTAATCATGACCTATGCTTGGATTGTTCGGCCTCATTATTTTTTTTTTAAACCCAAATAAGAGACATTGACGGTTGTTTTTGGACTGGACAAGGTATGGGAGGCAACGGAGCGACGCCATTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGGTAACTTTCTACAACTTTCACAACCATTTCTCTTCTATTTAGAGAAGTAATTCTAAGATTCCTTTTCATTTCCCTTTCCGCAGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTACGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCTAAGGGAACTGCCGGGACCAGGGTGGTT

mRNA sequence

GAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCATTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTACGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCTAAGGGAACTGCCGGGACCAGGGTGGTT

Coding sequence (CDS)

ATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCATTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTACGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCTAAGGGAACTGCCGGGACCAGGGTGGTT

Protein sequence

MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV

Homology

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_023549469.1 (membrane protein PM19L [Cucurbita pepo subsp. pepo] >KAG7013458.1 hypothetical protein SDJN02_23624, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.3 bits (926), Expect = 4.8e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_022959288.1 (uncharacterized protein LOC111460317 [Cucurbita moschata])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+AVPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_038874443.1 (membrane protein PM19L [Benincasa hispida] >XP_038874444.1 membrane protein PM19L [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 171/180 (95.00%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLF+NLIMY IL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFINLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_008460698.1 (PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 171/180 (95.00%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_023005980.1 (uncharacterized protein LOC111498858 [Cucurbita maxima])

HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGG+  TPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+AVPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 179

[Close]

BLAST of Carg10116 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.8e-49
Identity = 94/156 (60.26%), Postives = 121/156 (77.56%), Query Frame = 0


Query: 5   MGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAVM 64
           +GR M APLL LNLIMY I++GFASW +N YING T HP + GNGAT +FL FA+L  V+
Sbjct: 4   VGRTMIAPLLVLNLIMYLIVIGFASWNLNHYINGETNHPGVAGNGATFYFLVFAILAGVV 63

Query: 65  GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEA 124
           G ASKLAG++H+R+W + SLA   +++L+ WA+T LAFGLACK+I IGG+RGWRLRV+EA
Sbjct: 64  GAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGGYRGWRLRVLEA 123

Query: 125 FIIILTITQLLYLLLLHAGIFSRRY--GPGYWDTDY 159
           F+IIL  TQLLY+ +LH G+FS  +  G G +  DY
Sbjct: 124 FVIILAFTQLLYVAMLHGGLFSGNHAAGAGGYGGDY 159

[Close]

BLAST of Carg10116 vs. ExPASy TrEMBL
Match: A0A6J1H5I7 (uncharacterized protein LOC111460317 OS=Cucurbita moschata OX=3662 GN=LOC111460317 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.2e-96
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+AVPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. ExPASy TrEMBL
Match: A0A1S3CDH8 (uncharacterized protein LOC103499466 OS=Cucumis melo OX=3656 GN=LOC103499466 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.0e-93
Identity = 171/180 (95.00%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. ExPASy TrEMBL
Match: A0A6J1KYX7 (uncharacterized protein LOC111498858 OS=Cucurbita maxima OX=3661 GN=LOC111498858 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.2e-93
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGG+  TPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+AVPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 179

[Close]

BLAST of Carg10116 vs. ExPASy TrEMBL
Match: A0A0A0LI45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169790 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of Carg10116 vs. ExPASy TrEMBL
Match: A0A6J1CDE2 (uncharacterized protein LOC111009705 OS=Momordica charantia OX=3673 GN=LOC111009705 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.7e-86
Identity = 163/180 (90.56%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFIL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+GVASKLAGLYHIRAWRSDSLAGAGS S++TWAVTVLAFGLACK+ISIGGHRGWRLR
Sbjct: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSASIITWAVTVLAFGLACKEISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIIL +TQLLY+LLLHAGIFSR YGPGY +TDYGMGGG+A  GE PKGTAGTRVV
Sbjct: 121 VVEAFIIILAVTQLLYILLLHAGIFSREYGPGYRETDYGMGGGTAA-GEVPKGTAGTRVV 179

[Close]

BLAST of Carg10116 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-65
Identity = 125/186 (67.20%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MA T+GRN+AAPLLFLNL+MY I+LGFASWC+N+YING T HPS GGNGATPFFLTF++L
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFGGNGATPFFLTFSIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T LA GLACKQI+IGG RGWRL+
Sbjct: 61  AAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMG---GGSAVP---GEPPKGT 180
           ++EAFIIILT TQLLYL+L+HAG  S +YGPGY D DY  G   G   VP   GE   G 
Sbjct: 121 MIEAFIIILTFTQLLYLMLIHAGSLSSKYGPGYRDQDYATGQAHGHGHVPHTVGEHKAGV 180

[Close]

BLAST of Carg10116 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-23
Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYI-NGTTYHPSMG------------G 60
           MA    + +A+ LL LN  MY I+LG   W +NR I +G    P++             G
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ FA+L  V+G AS ++GL HIR+W   SL  A + + + W +TVLA G A K
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           +I + G R  +LR +EAF+IIL++TQL+Y+  +H
Sbjct: 121 EIELQG-RNAKLRTMEAFLIILSVTQLIYIAAVH 153

[Close]

BLAST of Carg10116 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYIN-----GTTY---------HPSMG 60
           M +   + +A+ LL LN  MY I+LG  +W +N+ IN     G  Y         H  M 
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPM- 60

Query: 61  GNGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLAC 120
           GN AT FF+ FA++  V G AS ++G+ H+++W + SL  A S + + W++T+LA G  C
Sbjct: 61  GNAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGC 120

Query: 121 KQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           K+I + G R  RLR +EAF+IIL+ TQLLY+  ++
Sbjct: 121 KEIEL-GMRNARLRTMEAFLIILSATQLLYIAAIY 153

[Close]

BLAST of Carg10116 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.6e-20
Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSM-------------GG 60
           MA    ++ A  LL LNL +YF++   ASW +N  I  T    S               G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ F ++  V+G+A+ L G+ ++  W S +L  A ++SL++W++T+LA GLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGI 145
           +I+IG      LR +E   II++ TQLL    +HAG+
Sbjct: 121 EINIGWTEA-NLRTLEVLTIIVSATQLLCTGAIHAGV 156

The following BLAST results are available for this feature:

BLAST of Carg10116 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549469.1	4.8e-96	100.00	membrane protein PM19L [Cucurbita pepo subsp. pepo] >KAG7013458.1 hypothetical p...	[more]
XP_022959288.1	1.1e-95	99.44	uncharacterized protein LOC111460317 [Cucurbita moschata]	[more]
XP_038874443.1	1.1e-92	95.00	membrane protein PM19L [Benincasa hispida] >XP_038874444.1 membrane protein PM19...	[more]
XP_008460698.1	1.5e-92	95.00	PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]	[more]
XP_023005980.1	1.9e-92	97.78	uncharacterized protein LOC111498858 [Cucurbita maxima]	[more]

BLAST of Carg10116 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	7.8e-49	60.26	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Carg10116 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5I7	5.2e-96	99.44	uncharacterized protein LOC111460317 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A1S3CDH8	7.0e-93	95.00	uncharacterized protein LOC103499466 OS=Cucumis melo OX=3656 GN=LOC103499466 PE=...	[more]
A0A6J1KYX7	9.2e-93	97.78	uncharacterized protein LOC111498858 OS=Cucurbita maxima OX=3661 GN=LOC111498858...	[more]
A0A0A0LI45	2.0e-92	94.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169790 PE=4 SV=1	[more]
A0A6J1CDE2	1.7e-86	90.56	uncharacterized protein LOC111009705 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of Carg10116 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04560.1	1.2e-65	67.20	AWPM-19-like family protein	[more]
AT1G29520.1	2.0e-23	41.56	AWPM-19-like family protein	[more]
AT5G46530.1	2.2e-22	40.00	AWPM-19-like family protein	[more]
AT5G18970.1	4.6e-20	37.58	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..143 e-value: 6.7E-51 score: 172.2
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 4..168
None	No IPR available	PANTHER	PTHR33294:SF16	BNAC05G02680D PROTEIN	coord: 4..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10116-RA	Carg10116-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane