Carg10078 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10078
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HR-like lesion-inducing protein-related
Location	Carg_Chr17: 951718 .. 954933 (+)
RNA-Seq Expression	Carg10078
Synteny	Carg10078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCATTACTGTTTGGGCGTTTAATTTTACGATTTTAGGCTTCTCTTCTATAATTTGCGCCCCCGTTGGAGTTTATCGGAGCTCTGAGTTTCCGATCCCACAAGCGCCAAGGTTCAGATTAGCCCTTCGTTTTCTCTCTTTCTCTCTAAAATGGGGTTCTTCTCTTTCCTTGGAAGGGTCCTCTTTGCCTCGCTGTTCATCCTCTCCGCCTGGCAAATGTACTATCTCTTTCTCTCTTTACATTATCAGATCGGACTGTATTATCTCTATGTTCTTTCAATCTGATTATTTTTGTTGTCTTCTACTGTAGATCTGCTAATTTTGATCGTATTTCTGTGTTTGTTTGTTCTTCTGATGATCGATTTTAGGGGTTTTGTAATCGGCGCTGTAGTGTGTGACTTTGTCTGTGTTTTCACTGATGTTTGACGATATTTGTCGCATTAGTTTTCCAATCGTAAGGATTATTGCTCTTTTTTTATGGGATTTATATTCTGATTGTTGATCTCGCCTTTTTTATGGACGGTTTGAATGTGCTTTTTGAAATCAGGAGTGAAGGTTTTTCGGAAATGGAAGGGGATTAAGGGATAAACAGACTTTAGTTTTTGTATTAGTGAGGAATGGAGAGTTCTTACCAATTTTTCTTCGCTGGATATTGACCTATCGCTTCTTGAGATTAGATTTGGAATGTTGGACGTTGTGATGAATTCTTAAGAAGCTGTATTTTTAGTTGATTCCTGAGGACCCACTTCACTTTTGGGTCATTCTTAATATTTGATTCATTTAAATTATGCATCATTGTGATAATTTGTTTTCAAGCTTAGTGGTTTGATGGAAGGAAATTATCAGATTGTTTTAGGTTCTTGATTTCTTTTTCTTTTTGTGTGTGTTTTCAACGAGATGGAACTTTCTAAATCCTTTTCTAGGAATCAATCTTAATTAAGAAAAGAGGTCGAAAAGGTTTTCAAATTTCATCTTTCAGGCAATACAAGTGCAGTTTTGCTTAACTTGTGTTAGATAGATTTGCATTTTGCTTATTTCTACGCTCTGTGATTTGAAGATTGGATCGGGTCTTCTTCTCCATTGTGAAAAAGTTAATCGAGTCGAACATTACTCGGGCGATCATGAAATGTAATACGTCCAACATACAATGAAATGAAGGATTTCTATGTTGTCTTCTTGTTTCTTGTTAAATTCTAATGTGCTTGTAAATATTGTTTTCTATCACTCGGTTTCTGGGCCATAATCATTTTGTAAGGGAGATGACCGACTGGTTGTAGGCGTAGCATTGGAACTGCTTTGTAGGTTTTTGTTAGGAAAATAATTCTATAGACCTTTTCGGTAAAACAGATCAAACTTATTATTATCAAAATGATTTGAACGAGCTTTAGCCTCTTTAGGAGTTATTACTTCCTTGGTAGCTCAACACATGTACTCTTTACCTGCTTATGCAAAACTCGTGGCTAATGACTTGGCTGGGTTCTATGCTCTCTGGCCTCATGTTAAGTTAAATAGATGAGGAATAAGATCGGACTTTCAAGTTTGTGTTTATGTTGACCTCGATAAGGCGTCTATTGTTAGGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAACTCATTCCGAAGATGTACACTCTTAGGAGAAACGTCTCCGCTCGATTTGGATTTGACCTACCCGTTATTGACGTGAGTTTCAGTTCTTCTGTGGATTGAACTGCTGAACCTTCGTACCCTTTTCTCATTTGTACTCAGATTATGAGTTTGTTCTGCAGGTTTCCCATTTAGTTGCTGCGTTTTTGTCTCTTAAAGGCATTGGTGGCCTTCTCTTTGTATTTGGGAGTCCAATTGGAGCTTATCTTCTGGTAGAATTTGCTTTGCCTCCTTTTGTTGATGCCTTTATTACTTCAAGTTACTTTCAGTTTGTTCTTATTCCCATTATAGCAGCCAAGCTTGTTTGTTTGTGCAGCTTCTCTACTTGGCCATTAGTACACCAATTCTGTATGATTTTTTCAACTATGGTCGTGACAAGTCCCAATTCAGTATACTAATGAATGATTTCTTACTGGTGAGTTAAGCAAATTTGTTTGCACTAAGCCAATTCATTCGTGTTCTTGCAAACGTCATATTTCGTTTATCTTTTTCGATTTGCAGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACGAACTAGAAATGTAAGACAACCCATTTCTTTAACTCGAAATCGTACCATTCCTTTCCATTCCTTTCACTCGGGTTTGGGGCTCGGATCGAAAAGCTTCTTATTTAATAATCCTTTTTGTGATGATAGATTTACTCATTTAGGAATTTCAGTTCTCTATTGACTGTCGAATGTTGTTGTTGGAGTTCATTACAGTCAAATGTGAAGGGATTTAGACACATGTTCTTCTCCATTCAAACTGTTTGCAGAGGCTTAGAATCTTTTATTCAATTAACCTTATTTGTAGAACTATATGTTGATGTGCATCTTTTTGGATGATAATTTTTCTGGAGAATCATCTAACCATATTTTGAATAATCTTGGAAGTCTCGTATCAACGAACATGCTTTCGAATCGAACCATCATTTACGATCTCTGTAATCATTTTGATATCTATCATGTCTGCCATTCATTAGGAATCTATCACCCATTTATCCGTGAGATTGAAGTGTAGGAATAGTTTCTGATCCTCATGAAGCTCACCATTCTCTGATTTGTCTTTGAAAAGTTCATAAACTTTAATTGTGTTCCTATTACCGACAAAATAGTGATATGATGGTTAGAAATGTTACTCGATACAAGTGAATATTCTTTTCAAGGTTAGGTATCGAGTCAATCAAGTCTAAATATGAGCAAAATCGAAACTCAAACTATGAGTCGGGTTTGGTTAGAATAGAGTCATACATTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGTAGGTGAATGTATCGGTTCATACCTTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGCAGGTGAATGTATCGGTTTAGACGTTCCAAGTTCGAACTTTTGAGCGAGCTCAATACCTATGTCTCGAGTATGAATCTTGGGGTGGGTGTGACGTATGAGGCCCTTTTGATATGTGACGTAGATTTTGTAAAGAAAACAATTTATA

mRNA sequence

TTAGCATTACTGTTTGGGCGTTTAATTTTACGATTTTAGGCTTCTCTTCTATAATTTGCGCCCCCGTTGGAGTTTATCGGAGCTCTGAGTTTCCGATCCCACAAGCGCCAAGGTTCAGATTAGCCCTTCGTTTTCTCTCTTTCTCTCTAAAATGGGGTTCTTCTCTTTCCTTGGAAGGGTCCTCTTTGCCTCGCTGTTCATCCTCTCCGCCTGGCAAATGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAACTCATTCCGAAGATGTACACTCTTAGGAGAAACGTCTCCGCTCGATTTGGATTTGACCTACCCGTTATTGACGTTTCCCATTTAGTTGCTGCGTTTTTGTCTCTTAAAGGCATTGGTGGCCTTCTCTTTGTATTTGGGAGTCCAATTGGAGCTTATCTTCTGCTTCTCTACTTGGCCATTAGTACACCAATTCTGTATGATTTTTTCAACTATGGTCGTGACAAGTCCCAATTCAGTATACTAATGAATGATTTCTTACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACGAACTAGAAATGTAAGACAACCCATTTCTTTAACTCGAAATCGTACCATTCCTTTCCATTCCTTTCACTCGGGTTTGGGGCTCGGATCGAAAAGCTTCTTATTTAATAATCCTTTTTGTGATGATAGATTTACTCATTTAGGAATTTCAGTTCTCTATTGACTGTCGAATGTTGTTGTTGGAGTTCATTACAGTCAAATGTGAAGGGATTTAGACACATGTTCTTCTCCATTCAAACTGTTTGCAGAGGCTTAGAATCTTTTATTCAATTAACCTTATTTGTAGAACTATATGTTGATGTGCATCTTTTTGGATGATAATTTTTCTGGAGAATCATCTAACCATATTTTGAATAATCTTGGAAGTCTCGTATCAACGAACATGCTTTCGAATCGAACCATCATTTACGATCTCTGTAATCATTTTGATATCTATCATGTCTGCCATTCATTAGGAATCTATCACCCATTTATCCGTGAGATTGAAGTGTAGGAATAGTTTCTGATCCTCATGAAGCTCACCATTCTCTGATTTGTCTTTGAAAAGTTCATAAACTTTAATTGTGTTCCTATTACCGACAAAATAGTGATATGATGGTTAGAAATGTTACTCGATACAAGTGAATATTCTTTTCAAGGTTAGGTATCGAGTCAATCAAGTCTAAATATGAGCAAAATCGAAACTCAAACTATGAGTCGGGTTTGGTTAGAATAGAGTCATACATTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGTAGGTGAATGTATCGGTTCATACCTTCTAAGGTAGAGATGGTTTAGTTCTTGGAACTTGCAGGTGAATGTATCGGTTTAGACGTTCCAAGTTCGAACTTTTGAGCGAGCTCAATACCTATGTCTCGAGTATGAATCTTGGGGTGGGTGTGACGTATGAGGCCCTTTTGATATGTGACGTAGATTTTGTAAAGAAAACAATTTATA

Coding sequence (CDS)

ATGGGGTTCTTCTCTTTCCTTGGAAGGGTCCTCTTTGCCTCGCTGTTCATCCTCTCCGCCTGGCAAATGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAACTCATTCCGAAGATGTACACTCTTAGGAGAAACGTCTCCGCTCGATTTGGATTTGACCTACCCGTTATTGACGTTTCCCATTTAGTTGCTGCGTTTTTGTCTCTTAAAGGCATTGGTGGCCTTCTCTTTGTATTTGGGAGTCCAATTGGAGCTTATCTTCTGCTTCTCTACTTGGCCATTAGTACACCAATTCTGTATGATTTTTTCAACTATGGTCGTGACAAGTCCCAATTCAGTATACTAATGAATGATTTCTTACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCGATTTCGAGGAGGCAACAGAAGAAGAAGGCACACAAAGCCAAAACGAACTAG

Protein sequence

MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMNDFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN

Homology

[Close]

BLAST of Carg10078 vs. NCBI nr
Match: XP_023547571.1 (uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo] >KAG6574926.1 hypothetical protein SDJN03_25565, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013495.1 hypothetical protein SDJN02_23661 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. NCBI nr
Match: XP_023006758.1 (uncharacterized protein LOC111499395 [Cucurbita maxima])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPK+YTLRRNVSA+FGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKLYTLRRNVSAQFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. NCBI nr
Match: XP_022958789.1 (uncharacterized protein LOC111459955 [Cucurbita moschata])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGF LPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFYLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. NCBI nr
Match: XP_038906663.1 (uncharacterized protein LOC120092598 isoform X2 [Benincasa hispida])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 146/157 (92.99%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+ T RRNVSARFGFDLPV+
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVV 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSH VAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDF+NYGR+KSQFS L+N
Sbjct: 61  DVSHSVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFYNYGREKSQFSTLLN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DF+LHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFILHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. NCBI nr
Match: XP_022138701.1 (uncharacterized protein LOC111009799 [Momordica charantia])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 145/157 (92.36%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+   RRNVS+ FGF+LPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+KSQFSIL+N
Sbjct: 61  DISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSILLN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN 157

[Close]

BLAST of Carg10078 vs. ExPASy TrEMBL
Match: A0A6J1L5U1 (uncharacterized protein LOC111499395 OS=Cucurbita maxima OX=3661 GN=LOC111499395 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.0e-79
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPK+YTLRRNVSA+FGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKLYTLRRNVSAQFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. ExPASy TrEMBL
Match: A0A6J1H651 (uncharacterized protein LOC111459955 OS=Cucurbita moschata OX=3662 GN=LOC111459955 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.6e-79
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGF LPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFYLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. ExPASy TrEMBL
Match: A0A6J1CAG6 (uncharacterized protein LOC111009799 OS=Momordica charantia OX=3673 GN=LOC111009799 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.9e-74
Identity = 145/157 (92.36%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+   RRNVS+ FGF+LPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+KSQFSIL+N
Sbjct: 61  DISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSILLN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Sbjct: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN 157

[Close]

BLAST of Carg10078 vs. ExPASy TrEMBL
Match: A0A1S3CE23 (uncharacterized protein LOC103499405 OS=Cucumis melo OX=3656 GN=LOC103499405 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73
Identity = 145/157 (92.36%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKEL+PK+ T RRN SARFGFDLPVI
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGRAAKELLPKLNTFRRNFSARFGFDLPVI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+ SQF ILMN
Sbjct: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRENSQFGILMN 120

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DF+LHVALAGALLFFIGTKNSI R+QQKKKAHKAKTN
Sbjct: 121 DFILHVALAGALLFFIGTKNSIWRKQQKKKAHKAKTN 157

[Close]

BLAST of Carg10078 vs. ExPASy TrEMBL
Match: A0A0A0LNP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190730 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.5e-72
Identity = 142/157 (90.45%), Postives = 149/157 (94.90%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKEL+PK+ T RRN SARFGFDLP I
Sbjct: 57  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGRAAKELLPKLNTFRRNFSARFGFDLPAI 116

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           DV+HLVAAFLSLKGIGGLLFVFGSPIGAYLLL+YLAISTPILYDFFNYGR+ SQF ILMN
Sbjct: 117 DVTHLVAAFLSLKGIGGLLFVFGSPIGAYLLLIYLAISTPILYDFFNYGRENSQFGILMN 176

Query: 121 DFLLHVALAGALLFFIGTKNSISRRQQKKKAHKAKTN 158
           DF+LHVALAGALLFFIGTKNSI R+QQKKKAHKAKTN
Sbjct: 177 DFILHVALAGALLFFIGTKNSIWRKQQKKKAHKAKTN 213

[Close]

BLAST of Carg10078 vs. TAIR 10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 187.6 bits (475), Expect = 7.8e-48
Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFN+FGTDGGPAAKEL PK+   + ++S+  G  LP +
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           +V  +V A ++LKG+GGLLFV G+  GAYLL +YL + +PILYDF+NYG +  QFS+L+ 
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query: 121 DFLLHVALAGALLFFIGTKNSI--SRRQQKKKAHKAK 156
           +FL  VAL GALLFFIG KNS   S+R  KK+  K K
Sbjct: 121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPK 157

[Close]

BLAST of Carg10078 vs. TAIR 10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-44
Identity = 94/156 (60.26%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           MGFFSFLGRVLFASLFILSAWQMFN    DGGPAAKEL PK+  ++ ++S+R G  LP I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFN----DGGPAAKELAPKLDLVKAHLSSRLGVTLPKI 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           +V  +VA  ++LKG+GGLLFV G+  GAYLL  YL +  PILYDF+NYG  +  FS+L+ 
Sbjct: 61  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 120

Query: 121 DFLLHVALAGALLFFIGTKNSI-SRRQQKKKAHKAK 156
           +FL  VAL GALLFFIG KNS  +++  KK+  K K
Sbjct: 121 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPK 152

[Close]

BLAST of Carg10078 vs. TAIR 10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-41
Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVI 60
           M   SFLGR LF S+F+LSAWQ FN+FG DGG +AK L PK      +V+   G  LP +
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  DVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMN 120
           D+  LVAA ++LKGIGGLLFVFGS +GAYLLLL+ A++TPILYDF+NY  D+ +F  L +
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 DFLLHVALAGALLFFIGTKNSISR-RQQKKKAHKAKTN 158
            F   +AL G LLFFIG KNS    RQ +KKA KAK N
Sbjct: 121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAKAN 158

[Close]

BLAST of Carg10078 vs. TAIR 10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 8   GRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVIDVSHLVA 67
           GRV+FAS F++SAW+ +  FG     AA EL PK+        A             +VA
Sbjct: 25  GRVVFASAFLVSAWREYYGFGL----AADELRPKLGFFENQAKA-------------IVA 84

Query: 68  AFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSILMNDF 123
             + +K +GG+LF+F + +GA LLL+Y AI +PILYDF+N   D+  F++    F
Sbjct: 85  LGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKF 122

[Close]

BLAST of Carg10078 vs. TAIR 10
Match: AT3G23180.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 7   LGRVLFASLFILSAWQMFNEFGTDGGPAAKELIPKMYTLRRNVSARFGFDLPVIDVSHLV 66
           +GR LFAS F LS+W  + E   +         PK           FG+      + HL+
Sbjct: 24  IGRALFASSFFLSSWHDYMELKANWNGTEDYWSPK-----------FGYSGD--QIKHLM 83

Query: 67  AAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRDKSQFSIL 119
              + ++ +GGL+F++GS  GA+LLL+Y  I+T + +DF+N+  D  +F +L
Sbjct: 84  TVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLL 122

The following BLAST results are available for this feature:

BLAST of Carg10078 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547571.1	1.6e-79	100.00	uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo] >KAG6574926.1 ...	[more]
XP_023006758.1	1.0e-78	98.73	uncharacterized protein LOC111499395 [Cucurbita maxima]	[more]
XP_022958789.1	1.8e-78	99.36	uncharacterized protein LOC111459955 [Cucurbita moschata]	[more]
XP_038906663.1	1.2e-74	92.99	uncharacterized protein LOC120092598 isoform X2 [Benincasa hispida]	[more]
XP_022138701.1	1.0e-73	92.36	uncharacterized protein LOC111009799 [Momordica charantia]	[more]

BLAST of Carg10078 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg10078 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L5U1	5.0e-79	98.73	uncharacterized protein LOC111499395 OS=Cucurbita maxima OX=3661 GN=LOC111499395...	[more]
A0A6J1H651	8.6e-79	99.36	uncharacterized protein LOC111459955 OS=Cucurbita moschata OX=3662 GN=LOC1114599...	[more]
A0A6J1CAG6	4.9e-74	92.36	uncharacterized protein LOC111009799 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A1S3CE23	3.2e-73	92.36	uncharacterized protein LOC103499405 OS=Cucumis melo OX=3656 GN=LOC103499405 PE=...	[more]
A0A0A0LNP8	3.5e-72	90.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190730 PE=4 SV=1	[more]

BLAST of Carg10078 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04340.1	7.8e-48	62.42	HR-like lesion-inducing protein-related	[more]
AT5G43460.1	2.3e-44	60.26	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	1.1e-41	57.59	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	1.1e-14	39.13	HR-like lesion-inducing protein-related	[more]
AT3G23180.1	1.5e-11	33.04	HR-like lesion-inducing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 1..137 e-value: 2.6E-51 score: 173.5
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 1..157
None	No IPR available	PANTHER	PTHR31474:SF4	BNAA10G27800D PROTEIN	coord: 1..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10078-RA	Carg10078-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane