Carg10038 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAAGCAGCTACAGGTAACAGTAGGAGAGGGGCGGAGCCGTCGCTGAAAGACAAGGGCAATGAGTTTTTTAAAGCAGGGAACTATCTCAAAGCTGCTGCACTTTACACACAAGCTATCAAACTAGACCCTTCGAATCACGCTCTTTATAGGTATATTACCCTCTCACTCTCTCTTGCTTGATACAGTTCGCATAAAAAATCAGAATATTATTCTTATTGGGTTTTTCTGTTGCACTATGTTATTGATTCAGACAATTGGGATTGGATGTGCATACAATGCTTCTTCCGATCTAAGGATGTTATCTTAGTGAAGAACTCAAACTTTGATCTCCCAGTAGCTTATCGACGAGATGAGGTTATAAAATGCTTCTGTGGGTTGCTCTCTGTTCAGGATTGTTGGGAGAGGACTCCCAACATCGACTAATTAAGAGGTTGATCATGGGTTTATAAGTAAAGAATATATCTCCATTGGTACGAGGCTTTTGGAGAAATCAAAAGCAAAACCACGAAAGTTTATGTTCAAAGTGGACAATATCATACCATTGTGGAGGTATGTGATTCTTAGCATGGTATCAGAGTCATGCCCTTAACTTAACCATGTCAATAGAAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTATCAAACAAATGATGTACTTTTTTCAAGGGCTCTAGAGAAGGAGTCGAGTCTCGATTAAGGGGAGGCTGTTTGAGAGCTCCATAAGCCTCAGGGGAGGCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGGGAGAGGAGTCCTACATCGGCTAATTAAGGGGTTGATCATGAATTTATAAATAAGGAATATGTCATTGCTATGAAACTGGTTTATTAGTAAGGAATATATCTCCATATTCCTCAAATACCTTGCCACTAAGCTTTTGGAACTGGTTAGGAATGCAACACATGACAACAAGAAAAATAGGATAAATCCTAAGCATGTTCTTTTAGTTGTGAAGAACATTGAGGAGCTCGAAAAATTACTTAAAAGAGTCACCATTGCAAGTGATGCAAGCGTAGTGAGCACGAGATAGGCAAGTAACGCCCATGAAAGTGCTCAAAGAGGAGTGAGCACAAGAGAGGCAATTACAACCATGTAGGTGCTCTAAGGAGATAGTATGAATGAGTTATGTGCTCTCACGACTTTTATTGACAGATGTGCTAACGAAAAGACTTTTTAACTTGCTACTTTATGAGTTAGTAACCAAGCTAAGAGTGAATAATATCTAACTCAGTTTATGGGGAGTGTCGAAGGAATATCCTTTAGTTAAGGAACATTAGTGTAATCTCAATTAATAAGTGAATTAGCCTATTTTTTTTTTTGTTGTTGTCTGCATTGTTTCCTGTTCCTCAGAGGAGAGTAACACAAATTACTTTTGCAACAAGTAATACAAATTACTGCAACAAAGATAACAAATAGTTTCGAAACCGCAGTTCTTCTACACCAAATGTTCGTAAGAATCGTAATTGTGCTGATGTATTTTTGGTTTTCCAGCAATCGTGCTGCTGCATTTCTGCATCTAGTTAAGCTTAACAAAGCACTTGCGGATGCTGAGATGACAATTACATTGAGCCCACAGTGGGAAAAGGTAACAAATTCCATTCCCTGTATTGTTTGAGCTAGATCCTTTTCAGTTCCTTTCATTTAACTTTGCCATATTGATGTGCCACACCACAGGGATATTTCAGAAAGGGATGCGTATTGGAAGCAATGGAAAAATATGATGATGTATGTCGATTTCTTCCTTCTTGCTTCTTCCTTAGCAACGGGTATATGAATTCTTCTGATAGTTAAAATTTTCTTATTGTAGGCCTTGTCTGCATTTCAAGTGGCCTTGCAATACAATCCACAAAGTGCAGAAGTCTCAAGAAAGATTAAAAGGATTTCACAATTGGTGAAAGATAAAAAGAGGTCTCAAGAAGTGGAGAAAAAGAGATCAAATATAGATATGACAAAGCACTTGGATAAACTGAAATCTGAACTGGTGAGCTGCATTCGTTCAACTGATGCTCATTTTCACATGTACTGTAACAGCCAAGGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCCTTTCGGGCTTCCCCTCAAGATTTAAAAAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGGGTGTTTTGTTCTCCTCCCCAACCGATGTGGGGTCTCATAAAATATCTGTTTGTTAATGCAAATATCTATTTTCTACGTTTCCATGCTTCAGGGGTGAATTTGCTCACGAATTAGTGATTTTCCTTTTCTTTCAAGGTTGCTCACTGGCCACTGAAACTAGTCTTTTGTTTTTTTTCCCCATCTTGAAGTGTTCATTAGAATTGCCGTTTCTTTCTCGTTGCAGTCTGAAAAATATGGCTCTGAAGAATGCTGGAAAGACATATTTTCTTTTCTTGTGGAGACTATGGAGGCTGCAGTGAGATCATGGCATGAAACTTCTAATGTGGATGCTAAAGTGTTCTATCTACTTGATAAGGAAAAGACAGATACTGAAAAATATGCTCCGATCGTAAACATTGATAAGGTGTTAGCCGTCTACTGTATGCTTCTCCATTCCATAACATGTATTGCTTTTTGTTCCGTTTCTTACTTCGATTAGAATAAGTTATTGAAAGGGTTTCTCTTATCGATCCTGTTATTCTCGAAACTCTAATATTGAGTCTAAATTGTATATTTGGTTGCTAGAAGAAACACTTTAACCATTCTATACCAACTACTTCTGTCTTTTGTGCTATGCAGGCATTTGAATCACCCCACATGCATAGTAATTGCTTTCAGTTTTTACGGAAATATGCCGAGGATTCAGTCTCTCGAGCAGCATGCTTAGTAACTCCTAAAAGCTTGATATCTTACCCACAGGTGATGTTGAATGTCTTTGTTTCTATATTGCTATGATATGGTATATCCAGTGAAAGATCACTTAGTTTACTAGGTTAGACCACATAATGTGCATTTTAACAAATAACAATTCTACCATTTATTTTGTGTGAGAACTCTTCGATGAACTCTTTTCTGTCATTGAATAATTTTGAATACTCTTCTAATCTTTTCCTTTTCTTGTCATGGCGGTTCATAGATAATCTATTGGTTTCCTATGCTATCAATTCATATCTTGTATGTGGGCTTAGACATCAGTCTTGTAACAGCCCAAGCCCACCGCTAACAGATATTGTCCACTTTGGTCCGTTACGTATCGCCGTTAGTCTCACAATTTTAAAACGTGTTTGCTAGGTAGAGGTTTCCACACCCTTATAAGGAATGCTCCCTTCCCCTCTCCAATTGACGTGGGATCTCACACGTCTTTTTTCCCTCCTTGGTAGAGGCTATATTTCTTGTTCGAATCAGAAGACTCCCAAGTAACAGCATTTAGTGATAGAAGCCAAAGTACTGAAATGATATTGAAAGATAAAAAGATAAAGAACTCAATAGCTCCCTAGTAATTTGACAAACTCTCTCAAGTCCAAACGCACTAAACTCTTGCCTATCTCCATCCCCTCTCACTCCCTCTGTCTAATCAACTCCTTGCCGAAAAATAATATACCTTTACCATCCTAATAGTATTCCTAGCAATTATACTCCTAATGGCACTTCTAAAATTTAATTATGCAAAAATTCTCAATGATAAATATTGTTTGCAGGTCTGGAAAGGACAAGGTTCAAGAAAATGGAAGCATGGACAACACGATGGTTTCTTCGTTCAACTTGAAACCCCTTCTTTAAGAAAGCTATGGTTTGTTCCTAGTTCCAATGAACTGGGGCGACCAGTGTGCCGGTCTATTTCTTTCTCTTTCTTTCTGTCTATGTTTTGTCAACCTCAGTTCTGCCTTTCTGGGTTGCATAACCTTGTTTAACATGGACGTTTTCCCTCGTTTTCATGTGTTTTGACTTTTGTGGTTGTCGTCTGTCGCTTTTTGTTAATTTTTGAGGTTTCGTTACTCATGTTTACAGCTGTGAAATTCATTTTCAGGGATCCTGAGGTTCTGGATATCGGTGCACACGAGTTACTGCCACGCATATTTATAGAAAAGCTGCCTAGCACTTAG ATGGCGGAAGCAGCTACAGGTAACAGTAGGAGAGGGGCGGAGCCGTCGCTGAAAGACAAGGGCAATGAGTTTTTTAAAGCAGGGAACTATCTCAAAGCTGCTGCACTTTACACACAAGCTATCAAACTAGACCCTTCGAATCACGCTCTTTATAGCAATCGTGCTGCTGCATTTCTGCATCTAGTTAAGCTTAACAAAGCACTTGCGGATGCTGAGATGACAATTACATTGAGCCCACAGTGGGAAAAGGGATATTTCAGAAAGGGATGCGTATTGGAAGCAATGGAAAAATATGATGATGCCTTGTCTGCATTTCAAGTGGCCTTGCAATACAATCCACAAAGTGCAGAAGTCTCAAGAAAGATTAAAAGGATTTCACAATTGGTGAAAGATAAAAAGAGGTCTCAAGAAGTGGAGAAAAAGAGATCAAATATAGATATGACAAAGCACTTGGATAAACTGAAATCTGAACTGTCTGAAAAATATGGCTCTGAAGAATGCTGGAAAGACATATTTTCTTTTCTTGTGGAGACTATGGAGGCTGCAGTGAGATCATGGCATGAAACTTCTAATGTGGATGCTAAAGTGTTCTATCTACTTGATAAGGAAAAGACAGATACTGAAAAATATGCTCCGATCGTAAACATTGATAAGGCATTTGAATCACCCCACATGCATAGTAATTGCTTTCAGTTTTTACGGAAATATGCCGAGGATTCAGTCTCTCGAGCAGCATGCTTAGTAACTCCTAAAAGCTTGATATCTTACCCACAGGTCTGGAAAGGACAAGGTTCAAGAAAATGGAAGCATGGACAACACGATGGTTTCTTCGTTCAACTTGAAACCCCTTCTTTAAGAAAGCTATGGTTTGTTCCTAGTTCCAATGAACTGGGGCGACCAGTGTGCCGGGATCCTGAGGTTCTGGATATCGGTGCACACGAGTTACTGCCACGCATATTTATAGAAAAGCTGCCTAGCACTTAG ATGGCGGAAGCAGCTACAGGTAACAGTAGGAGAGGGGCGGAGCCGTCGCTGAAAGACAAGGGCAATGAGTTTTTTAAAGCAGGGAACTATCTCAAAGCTGCTGCACTTTACACACAAGCTATCAAACTAGACCCTTCGAATCACGCTCTTTATAGCAATCGTGCTGCTGCATTTCTGCATCTAGTTAAGCTTAACAAAGCACTTGCGGATGCTGAGATGACAATTACATTGAGCCCACAGTGGGAAAAGGGATATTTCAGAAAGGGATGCGTATTGGAAGCAATGGAAAAATATGATGATGCCTTGTCTGCATTTCAAGTGGCCTTGCAATACAATCCACAAAGTGCAGAAGTCTCAAGAAAGATTAAAAGGATTTCACAATTGGTGAAAGATAAAAAGAGGTCTCAAGAAGTGGAGAAAAAGAGATCAAATATAGATATGACAAAGCACTTGGATAAACTGAAATCTGAACTGTCTGAAAAATATGGCTCTGAAGAATGCTGGAAAGACATATTTTCTTTTCTTGTGGAGACTATGGAGGCTGCAGTGAGATCATGGCATGAAACTTCTAATGTGGATGCTAAAGTGTTCTATCTACTTGATAAGGAAAAGACAGATACTGAAAAATATGCTCCGATCGTAAACATTGATAAGGCATTTGAATCACCCCACATGCATAGTAATTGCTTTCAGTTTTTACGGAAATATGCCGAGGATTCAGTCTCTCGAGCAGCATGCTTAGTAACTCCTAAAAGCTTGATATCTTACCCACAGGTCTGGAAAGGACAAGGTTCAAGAAAATGGAAGCATGGACAACACGATGGTTTCTTCGTTCAACTTGAAACCCCTTCTTTAAGAAAGCTATGGTTTGTTCCTAGTTCCAATGAACTGGGGCGACCAGTGTGCCGGGATCCTGAGGTTCTGGATATCGGTGCACACGAGTTACTGCCACGCATATTTATAGAAAAGCTGCCTAGCACTTAG MAEAATGNSRRGAEPSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNHALYSNRAAAFLHLVKLNKALADAEMTITLSPQWEKGYFRKGCVLEAMEKYDDALSAFQVALQYNPQSAEVSRKIKRISQLVKDKKRSQEVEKKRSNIDMTKHLDKLKSELSEKYGSEECWKDIFSFLVETMEAAVRSWHETSNVDAKVFYLLDKEKTDTEKYAPIVNIDKAFESPHMHSNCFQFLRKYAEDSVSRAACLVTPKSLISYPQVWKGQGSRKWKHGQHDGFFVQLETPSLRKLWFVPSSNELGRPVCRDPEVLDIGAHELLPRIFIEKLPST Homology
BLAST of Carg10038 vs. NCBI nr
Match: KAG7013535.1 (Hsp70-Hsp90 organizing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 659.1 bits (1699), Expect = 2.0e-185 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
BLAST of Carg10038 vs. NCBI nr
Match: XP_023547527.1 (RNA polymerase II-associated protein 3-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023547528.1 RNA polymerase II-associated protein 3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 651.7 bits (1680), Expect = 3.2e-183 Identity = 323/327 (98.78%), Postives = 325/327 (99.39%), Query Frame = 0
BLAST of Carg10038 vs. NCBI nr
Match: XP_022959010.1 (RNA polymerase II-associated protein 3-like [Cucurbita moschata]) HSP 1 Score: 648.7 bits (1672), Expect = 2.8e-182 Identity = 322/327 (98.47%), Postives = 324/327 (99.08%), Query Frame = 0
BLAST of Carg10038 vs. NCBI nr
Match: XP_023006740.1 (stress-induced-phosphoprotein 1-like [Cucurbita maxima]) HSP 1 Score: 644.8 bits (1662), Expect = 4.0e-181 Identity = 319/327 (97.55%), Postives = 323/327 (98.78%), Query Frame = 0
BLAST of Carg10038 vs. NCBI nr
Match: KAG6574966.1 (Hsp70-Hsp90 organizing protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 619.0 bits (1595), Expect = 2.3e-173 Identity = 313/327 (95.72%), Postives = 313/327 (95.72%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy Swiss-Prot
Match: Q7ZWU1 (Stress-induced-phosphoprotein 1 OS=Xenopus laevis OX=8355 GN=stip1 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy Swiss-Prot
Match: Q9LNB6 (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana OX=3702 GN=HOP1 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.3e-17 Identity = 46/117 (39.32%), Postives = 72/117 (61.54%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy Swiss-Prot
Match: Q5XEP2 (Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana OX=3702 GN=HOP2 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-16 Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy Swiss-Prot
Match: Q9STH1 (Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.5e-16 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy Swiss-Prot
Match: Q43468 (Hsp70-Hsp90 organizing protein 1 OS=Glycine max OX=3847 GN=HOP1 PE=1 SV=2) HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy TrEMBL
Match: A0A6J1H534 (RNA polymerase II-associated protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111460130 PE=4 SV=1) HSP 1 Score: 648.7 bits (1672), Expect = 1.3e-182 Identity = 322/327 (98.47%), Postives = 324/327 (99.08%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy TrEMBL
Match: A0A6J1L101 (stress-induced-phosphoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499381 PE=4 SV=1) HSP 1 Score: 644.8 bits (1662), Expect = 1.9e-181 Identity = 319/327 (97.55%), Postives = 323/327 (98.78%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy TrEMBL
Match: A0A0A0LNU0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G223130 PE=4 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 4.3e-173 Identity = 308/331 (93.05%), Postives = 316/331 (95.47%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy TrEMBL
Match: A0A1S3BME6 (stress-induced-phosphoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103491237 PE=4 SV=1) HSP 1 Score: 610.1 bits (1572), Expect = 5.2e-171 Identity = 304/331 (91.84%), Postives = 315/331 (95.17%), Query Frame = 0
BLAST of Carg10038 vs. ExPASy TrEMBL
Match: A0A6J1ERM7 (serine/threonine-protein phosphatase 5-like OS=Cucurbita moschata OX=3662 GN=LOC111436945 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 6.0e-167 Identity = 300/331 (90.63%), Postives = 311/331 (93.96%), Query Frame = 0
BLAST of Carg10038 vs. TAIR 10
Match: AT1G04190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 497.7 bits (1280), Expect = 7.3e-141 Identity = 242/328 (73.78%), Postives = 283/328 (86.28%), Query Frame = 0
BLAST of Carg10038 vs. TAIR 10
Match: AT1G12270.1 (stress-inducible protein, putative ) HSP 1 Score: 92.0 bits (227), Expect = 9.2e-19 Identity = 46/117 (39.32%), Postives = 72/117 (61.54%), Query Frame = 0
BLAST of Carg10038 vs. TAIR 10
Match: AT1G62740.1 (stress-inducible protein, putative ) HSP 1 Score: 88.6 bits (218), Expect = 1.0e-17 Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Carg10038 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative ) HSP 1 Score: 87.8 bits (216), Expect = 1.7e-17 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 0
BLAST of Carg10038 vs. TAIR 10
Match: AT4G12400.2 (stress-inducible protein, putative ) HSP 1 Score: 87.8 bits (216), Expect = 1.7e-17 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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