Carg10000 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg10000
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal RNA small subunit methyltransferase G
LocationCarg_Chr10: 2127710 .. 2129593 (-)
RNA-Seq ExpressionCarg10000
SyntenyCarg10000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAGAGAGATCGCGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCATTCAAATTGTGTGTCGCTCTGTCGATGGCATCCAGGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAGGGAAGAAAGAGTTGGAAAGAAAAGAAAGGAAAGGAAAGGAAAGCGAAGATGATGGATTTCGAGATGTCTTCTAATGTCCTCCAACCAAACCCACCTCTCACAAACATCTTCATCACTGTCTCTGAAAACAACAATATTTTGCACCGAGTTATGTGGGCTTTTTTGGGTTTTAGTTGGCTCGGTCAGAGCTTCACAGAGAAAACAGGAAACCAGGAACCTTCACCCACCCCCCACCCCCTTCCTTCTCTTCCTTCCCAATTCCCTCACCAATTCCCATCCATTTCTCTATTCTCTTTCTTCTCTCCCTCTTTCTTTCCCCATCTAACGTTTTGGTTCTTTACCCATCTGGGTTCTTAATTTCCTTTCTTCATTCCCATCTATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGTAATTTTCTTTTGCAGCTTCTACGGATTTGGGGTTTGTTTTTTTCTCTCGTGATTCTATCAGATCTGGCTTTCTTTTGATGAATGTTTGAATATTTTTTTCAGATCTTCTCATATATTGATTTCATGTGAGATTTGGGTTGTTTCTTTTTTCATACAATTTCTGGTTTGGAAGAGGAAAAGATGGTTTTGATCTATTAGCTCTCAATCATGGAAACTTGTTTTTTTCTTTTCTTTGGGCTAAGATAATTCTTCCGAGTTCTTTTTATGGATTGTTTGTTGAAATTTGAAATACCCATCTTAGATCATCCTTCTCCCCCCCAGTTCTGAGTTTGTGACATAGAGATCGGTTTAAGACTCAGGAATGTTATGGATGAACAAACAGTTGAAAGTTTTTGTTTTCCTTCCAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGGTATAATCTTTACGTTATTACATTGTATTTGTACTGATCTTCATCAGGAATTGGTGAATTGTTTAGGCCTAACTATGAGTCTACGTTTATATTGAAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGGTAATTGTCTAAGGGGACTTATTTGGGTACTAATGTTATGATTGCTAAACTCTATCAACCTCCTCTCCCTAACTATTGTTCCTTTGGTTCAGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA

mRNA sequence

GAGAGAGAGAGAGATCGCGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCATTCAAATTGTGTGTCGCTCTGTCGATGGCATCCAGGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAGGGAAGAAAGAGTTGGAAAGAAAACCTTCCCAATTCCCTCACCAATTCCCATCCATTTCTCTATTCTCTTTCTTCTCTCCCTCTTTCTTTCCCCATCTAACGTTTTGGTTCTTTACCCATCTGGGTTCTTAATTTCCTTTCTTCATTCCCATCTATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA

Coding sequence (CDS)

ATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA

Protein sequence

MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV
Homology
BLAST of Carg10000 vs. NCBI nr
Match: KAG7023440.1 (hypothetical protein SDJN02_14465 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA
Sbjct: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
           EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN
Sbjct: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120

Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
           QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180

Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
           PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK
Sbjct: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240

Query: 241 RKISWQDQVALRV 254
           RKISWQDQVALRV
Sbjct: 241 RKISWQDQVALRV 253

BLAST of Carg10000 vs. NCBI nr
Match: KAG6589768.1 (hypothetical protein SDJN03_15191, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 484.6 bits (1246), Expect = 5.3e-133
Identity = 250/253 (98.81%), Postives = 250/253 (98.81%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA
Sbjct: 1   MKKM--KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
           EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAIS IN
Sbjct: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISDIN 120

Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
           QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180

Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
           PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK
Sbjct: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240

Query: 241 RKISWQDQVALRV 254
           RKISWQDQVALRV
Sbjct: 241 RKISWQDQVALRV 251

BLAST of Carg10000 vs. NCBI nr
Match: XP_022921741.1 (uncharacterized protein LOC111429897 [Cucurbita moschata])

HSP 1 Score: 481.9 bits (1239), Expect = 3.4e-132
Identity = 248/253 (98.02%), Postives = 249/253 (98.42%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGT+KSKLQMMKQKKMTLIA
Sbjct: 95  MKKM--KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTVKSKLQMMKQKKMTLIA 154

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
           EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAIS IN
Sbjct: 155 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISDIN 214

Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
           QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 215 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 274

Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
           PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDE QNDIKILACRGIGDGPSRAGK
Sbjct: 275 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEPQNDIKILACRGIGDGPSRAGK 334

Query: 241 RKISWQDQVALRV 254
           RKISWQDQVALRV
Sbjct: 335 RKISWQDQVALRV 345

BLAST of Carg10000 vs. NCBI nr
Match: XP_023516535.1 (uncharacterized protein LOC111780386 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126
Identity = 244/258 (94.57%), Postives = 246/258 (95.35%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAALSQYPVYEDPKARFKH GLLHDYQVLEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1   MKKM--KGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFH-----NNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFH     NNKKGKNVARRRPALQPVMA
Sbjct: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMA 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYS 180
           IS INQKERIDKGFSVPLQNSTPIPVLDLNQKAKT SRKKA QQNPTPVFDLNQKERMYS
Sbjct: 121 ISDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERMYS 180

Query: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
           ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDE+QNDIKILACRGIGDGP
Sbjct: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIGDGP 240

Query: 241 SRAGKRKISWQDQVALRV 254
           SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 255

BLAST of Carg10000 vs. NCBI nr
Match: XP_022988590.1 (uncharacterized protein LOC111485789 [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 5.0e-123
Identity = 234/258 (90.70%), Postives = 244/258 (94.57%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAAL QYPVYEDPKARFKH GLLHDYQVLEKETGT+K+KLQMMKQKKMTLIA
Sbjct: 1   MKKM--KGAAALFQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKNKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHN-----NKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLMNNQLST +H+SNGDLMQQK+FHN     NKKGK+ ARRRPALQPVMA
Sbjct: 61  EVRFLRKRYEYLMNNQLSTNDHHSNGDLMQQKEFHNQVANDNKKGKSAARRRPALQPVMA 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYS 180
           IS INQKERIDKGFS+PLQNSTPIPVLDLNQKAKTSSRKKANQQ+ TPVFDLNQKERMYS
Sbjct: 121 ISDINQKERIDKGFSIPLQNSTPIPVLDLNQKAKTSSRKKANQQSSTPVFDLNQKERMYS 180

Query: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
           ERDITPFFDLNQISIEEEELQTRYEPLS VELKKSLL+GGNDEQQN+IKILACRGIGDGP
Sbjct: 181 ERDITPFFDLNQISIEEEELQTRYEPLSVVELKKSLLQGGNDEQQNNIKILACRGIGDGP 240

Query: 241 SRAGKRKISWQDQVALRV 254
           SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 256

BLAST of Carg10000 vs. ExPASy TrEMBL
Match: A0A6J1E279 (uncharacterized protein LOC111429897 OS=Cucurbita moschata OX=3662 GN=LOC111429897 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132
Identity = 248/253 (98.02%), Postives = 249/253 (98.42%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGT+KSKLQMMKQKKMTLIA
Sbjct: 95  MKKM--KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTVKSKLQMMKQKKMTLIA 154

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
           EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAIS IN
Sbjct: 155 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISDIN 214

Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
           QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 215 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 274

Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
           PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDE QNDIKILACRGIGDGPSRAGK
Sbjct: 275 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEPQNDIKILACRGIGDGPSRAGK 334

Query: 241 RKISWQDQVALRV 254
           RKISWQDQVALRV
Sbjct: 335 RKISWQDQVALRV 345

BLAST of Carg10000 vs. ExPASy TrEMBL
Match: A0A6J1JK01 (uncharacterized protein LOC111485789 OS=Cucurbita maxima OX=3661 GN=LOC111485789 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.4e-123
Identity = 234/258 (90.70%), Postives = 244/258 (94.57%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAAL QYPVYEDPKARFKH GLLHDYQVLEKETGT+K+KLQMMKQKKMTLIA
Sbjct: 1   MKKM--KGAAALFQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKNKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHN-----NKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLMNNQLST +H+SNGDLMQQK+FHN     NKKGK+ ARRRPALQPVMA
Sbjct: 61  EVRFLRKRYEYLMNNQLSTNDHHSNGDLMQQKEFHNQVANDNKKGKSAARRRPALQPVMA 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYS 180
           IS INQKERIDKGFS+PLQNSTPIPVLDLNQKAKTSSRKKANQQ+ TPVFDLNQKERMYS
Sbjct: 121 ISDINQKERIDKGFSIPLQNSTPIPVLDLNQKAKTSSRKKANQQSSTPVFDLNQKERMYS 180

Query: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
           ERDITPFFDLNQISIEEEELQTRYEPLS VELKKSLL+GGNDEQQN+IKILACRGIGDGP
Sbjct: 181 ERDITPFFDLNQISIEEEELQTRYEPLSVVELKKSLLQGGNDEQQNNIKILACRGIGDGP 240

Query: 241 SRAGKRKISWQDQVALRV 254
           SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 256

BLAST of Carg10000 vs. ExPASy TrEMBL
Match: A0A5A7T0V7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00530 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.6e-98
Identity = 203/263 (77.19%), Postives = 214/263 (81.37%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+      +SQYPVYED K RFKH  LL DY  LEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1   MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQ-----FHNNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLM NQ STK+HYSNG+ +QQKQ      +NNKK KN  RRR ALQP+  
Sbjct: 61  EVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPT 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERM-- 180
           IS INQKERID    +P+QNSTPIPVLDLNQKAKTSSRKKANQ N  PVFDLNQKERM  
Sbjct: 121 ISDINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCS 180

Query: 181 ---YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
               SER+ITPFFDLNQISIEEEELQT YEPL   ELKKSLLRGGNDEQQNDIKI ACR 
Sbjct: 181 GRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240

Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
           IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255

BLAST of Carg10000 vs. ExPASy TrEMBL
Match: A0A1S3B8I5 (uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.6e-98
Identity = 203/263 (77.19%), Postives = 214/263 (81.37%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+      +SQYPVYED K RFKH  LL DY  LEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1   MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQ-----FHNNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLM NQ STK+HYSNG+ +QQKQ      +NNKK KN  RRR ALQP+  
Sbjct: 61  EVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPT 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERM-- 180
           IS INQKERID    +P+QNSTPIPVLDLNQKAKTSSRKKANQ N  PVFDLNQKERM  
Sbjct: 121 ISDINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCS 180

Query: 181 ---YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
               SER+ITPFFDLNQISIEEEELQT YEPL   ELKKSLLRGGNDEQQNDIKI ACR 
Sbjct: 181 GRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240

Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
           IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255

BLAST of Carg10000 vs. ExPASy TrEMBL
Match: A0A0A0LW13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 6.0e-98
Identity = 202/263 (76.81%), Postives = 216/263 (82.13%), Query Frame = 0

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+      +SQYPVYED K RFKH  LL DY  LEKETGT+K KLQMMKQKKMTL+A
Sbjct: 1   MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQF-----HNNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLM NQ STK+HYSN + +QQKQ+     +NNKKGKN  RRR AL+P+  
Sbjct: 61  EVRFLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPT 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERM-- 180
           IS INQKERID    +PLQNSTPIPVLDLNQKAKTSSRKKA+Q N TPVFDLNQKERM  
Sbjct: 121 ISDINQKERID----MPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCS 180

Query: 181 ---YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
               SER+ITPFFDLNQISIEEEELQT YEPL   ELKKSLLRGGNDEQQNDIKI ACR 
Sbjct: 181 GRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240

Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
           IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255

BLAST of Carg10000 vs. TAIR 10
Match: AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-21
Identity = 80/237 (33.76%), Postives = 113/237 (47.68%), Query Frame = 0

Query: 18  YEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQL 77
           +EDPK RF+HH L+ DY  L  ET  ++ +LQ ++++K TL+AEVRFLR+RY +L  +Q 
Sbjct: 16  FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQ- 75

Query: 78  STKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNST 137
                       + K+   +  GK +          + +S  N+ E   K  S+P     
Sbjct: 76  ----------PQEIKKVRRSNGGKKIR---------VEVSPSNKSEAETKHVSLP----- 135

Query: 138 PIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQT 197
                DLN   K     K + +   P+FDLNQ      E   T   D NQ +   EE  +
Sbjct: 136 -----DLNHSEKAHDETKTSPKRRVPLFDLNQISG--EEEQETEAVDNNQENTRVEESNS 195

Query: 198 RYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQV-ALRV 254
                      K L+    + QQ D+K  +CR  G+G   + KRKISWQD V ALRV
Sbjct: 196 ----------CKRLMISSIEMQQKDVKPSSCRNGGNG---SNKRKISWQDPVAALRV 207

BLAST of Carg10000 vs. TAIR 10
Match: AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-17
Identity = 77/223 (34.53%), Postives = 110/223 (49.33%), Query Frame = 0

Query: 37  LEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQ-LSTKEHY-----SNGDLMQ 96
           LEKE    + +L+M+KQK++TL +EVRFLR+RYE+L  +Q L T         S G  + 
Sbjct: 27  LEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEVP 86

Query: 97  QKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT 156
           +K     KK   V    P     +  +  N+KE +          +  +   DL++K K 
Sbjct: 87  RKPSGERKKQSGVRASVPCFDLKLKNTICNEKEAL----------ANNVASCDLDKKRK- 146

Query: 157 SSRKKANQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKS 216
            SR       P  + DLN  E   S  D  P FDLNQIS EEEE +   E + A  +K +
Sbjct: 147 RSRGSDVLTFPVSLPDLN-GEGNTSGTDKVPGFDLNQISREEEEPEVNGEHMVAEAMKNA 206

Query: 217 LLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV 254
           +L     +   + K+  C  +    +RA KRK++WQD VAL V
Sbjct: 207 MLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVALSV 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7023440.11.4e-136100.00hypothetical protein SDJN02_14465 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6589768.15.3e-13398.81hypothetical protein SDJN03_15191, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022921741.13.4e-13298.02uncharacterized protein LOC111429897 [Cucurbita moschata][more]
XP_023516535.12.8e-12694.57uncharacterized protein LOC111780386 [Cucurbita pepo subsp. pepo][more]
XP_022988590.15.0e-12390.70uncharacterized protein LOC111485789 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1E2791.7e-13298.02uncharacterized protein LOC111429897 OS=Cucurbita moschata OX=3662 GN=LOC1114298... [more]
A0A6J1JK012.4e-12390.70uncharacterized protein LOC111485789 OS=Cucurbita maxima OX=3661 GN=LOC111485789... [more]
A0A5A7T0V74.6e-9877.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B8I54.6e-9877.19uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=... [more]
A0A0A0LW136.0e-9876.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G57910.12.0e-2133.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G30630.16.7e-1734.53unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34807OS08G0270800 PROTEINcoord: 1..253
NoneNo IPR availablePANTHERPTHR34807:SF3OS08G0270800 PROTEINcoord: 1..253

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10000-RACarg10000-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane