Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAGAGAGATCGCGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCATTCAAATTGTGTGTCGCTCTGTCGATGGCATCCAGGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAGGGAAGAAAGAGTTGGAAAGAAAAGAAAGGAAAGGAAAGGAAAGCGAAGATGATGGATTTCGAGATGTCTTCTAATGTCCTCCAACCAAACCCACCTCTCACAAACATCTTCATCACTGTCTCTGAAAACAACAATATTTTGCACCGAGTTATGTGGGCTTTTTTGGGTTTTAGTTGGCTCGGTCAGAGCTTCACAGAGAAAACAGGAAACCAGGAACCTTCACCCACCCCCCACCCCCTTCCTTCTCTTCCTTCCCAATTCCCTCACCAATTCCCATCCATTTCTCTATTCTCTTTCTTCTCTCCCTCTTTCTTTCCCCATCTAACGTTTTGGTTCTTTACCCATCTGGGTTCTTAATTTCCTTTCTTCATTCCCATCTATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGTAATTTTCTTTTGCAGCTTCTACGGATTTGGGGTTTGTTTTTTTCTCTCGTGATTCTATCAGATCTGGCTTTCTTTTGATGAATGTTTGAATATTTTTTTCAGATCTTCTCATATATTGATTTCATGTGAGATTTGGGTTGTTTCTTTTTTCATACAATTTCTGGTTTGGAAGAGGAAAAGATGGTTTTGATCTATTAGCTCTCAATCATGGAAACTTGTTTTTTTCTTTTCTTTGGGCTAAGATAATTCTTCCGAGTTCTTTTTATGGATTGTTTGTTGAAATTTGAAATACCCATCTTAGATCATCCTTCTCCCCCCCAGTTCTGAGTTTGTGACATAGAGATCGGTTTAAGACTCAGGAATGTTATGGATGAACAAACAGTTGAAAGTTTTTGTTTTCCTTCCAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGGTATAATCTTTACGTTATTACATTGTATTTGTACTGATCTTCATCAGGAATTGGTGAATTGTTTAGGCCTAACTATGAGTCTACGTTTATATTGAAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGGTAATTGTCTAAGGGGACTTATTTGGGTACTAATGTTATGATTGCTAAACTCTATCAACCTCCTCTCCCTAACTATTGTTCCTTTGGTTCAGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA
mRNA sequence
GAGAGAGAGAGAGATCGCGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCATTCAAATTGTGTGTCGCTCTGTCGATGGCATCCAGGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAGGGAAGAAAGAGTTGGAAAGAAAACCTTCCCAATTCCCTCACCAATTCCCATCCATTTCTCTATTCTCTTTCTTCTCTCCCTCTTTCTTTCCCCATCTAACGTTTTGGTTCTTTACCCATCTGGGTTCTTAATTTCCTTTCTTCATTCCCATCTATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA
Coding sequence (CDS)
ATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA
Protein sequence
MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV
Homology
BLAST of Carg10000 vs. NCBI nr
Match:
KAG7023440.1 (hypothetical protein SDJN02_14465 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA
Sbjct: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN
Sbjct: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK
Sbjct: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
Query: 241 RKISWQDQVALRV 254
RKISWQDQVALRV
Sbjct: 241 RKISWQDQVALRV 253
BLAST of Carg10000 vs. NCBI nr
Match:
KAG6589768.1 (hypothetical protein SDJN03_15191, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 484.6 bits (1246), Expect = 5.3e-133
Identity = 250/253 (98.81%), Postives = 250/253 (98.81%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA
Sbjct: 1 MKKM--KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAIS IN
Sbjct: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISDIN 120
Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK
Sbjct: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
Query: 241 RKISWQDQVALRV 254
RKISWQDQVALRV
Sbjct: 241 RKISWQDQVALRV 251
BLAST of Carg10000 vs. NCBI nr
Match:
XP_022921741.1 (uncharacterized protein LOC111429897 [Cucurbita moschata])
HSP 1 Score: 481.9 bits (1239), Expect = 3.4e-132
Identity = 248/253 (98.02%), Postives = 249/253 (98.42%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGT+KSKLQMMKQKKMTLIA
Sbjct: 95 MKKM--KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTVKSKLQMMKQKKMTLIA 154
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAIS IN
Sbjct: 155 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISDIN 214
Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 215 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 274
Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDE QNDIKILACRGIGDGPSRAGK
Sbjct: 275 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEPQNDIKILACRGIGDGPSRAGK 334
Query: 241 RKISWQDQVALRV 254
RKISWQDQVALRV
Sbjct: 335 RKISWQDQVALRV 345
BLAST of Carg10000 vs. NCBI nr
Match:
XP_023516535.1 (uncharacterized protein LOC111780386 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126
Identity = 244/258 (94.57%), Postives = 246/258 (95.35%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM KGAAALSQYPVYEDPKARFKH GLLHDYQVLEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1 MKKM--KGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFH-----NNKKGKNVARRRPALQPVMA 120
EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFH NNKKGKNVARRRPALQPVMA
Sbjct: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMA 120
Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYS 180
IS INQKERIDKGFSVPLQNSTPIPVLDLNQKAKT SRKKA QQNPTPVFDLNQKERMYS
Sbjct: 121 ISDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERMYS 180
Query: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDE+QNDIKILACRGIGDGP
Sbjct: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIGDGP 240
Query: 241 SRAGKRKISWQDQVALRV 254
SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 255
BLAST of Carg10000 vs. NCBI nr
Match:
XP_022988590.1 (uncharacterized protein LOC111485789 [Cucurbita maxima])
HSP 1 Score: 451.4 bits (1160), Expect = 5.0e-123
Identity = 234/258 (90.70%), Postives = 244/258 (94.57%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM KGAAAL QYPVYEDPKARFKH GLLHDYQVLEKETGT+K+KLQMMKQKKMTLIA
Sbjct: 1 MKKM--KGAAALFQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKNKLQMMKQKKMTLIA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHN-----NKKGKNVARRRPALQPVMA 120
EVRFLRKRYEYLMNNQLST +H+SNGDLMQQK+FHN NKKGK+ ARRRPALQPVMA
Sbjct: 61 EVRFLRKRYEYLMNNQLSTNDHHSNGDLMQQKEFHNQVANDNKKGKSAARRRPALQPVMA 120
Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYS 180
IS INQKERIDKGFS+PLQNSTPIPVLDLNQKAKTSSRKKANQQ+ TPVFDLNQKERMYS
Sbjct: 121 ISDINQKERIDKGFSIPLQNSTPIPVLDLNQKAKTSSRKKANQQSSTPVFDLNQKERMYS 180
Query: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
ERDITPFFDLNQISIEEEELQTRYEPLS VELKKSLL+GGNDEQQN+IKILACRGIGDGP
Sbjct: 181 ERDITPFFDLNQISIEEEELQTRYEPLSVVELKKSLLQGGNDEQQNNIKILACRGIGDGP 240
Query: 241 SRAGKRKISWQDQVALRV 254
SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 256
BLAST of Carg10000 vs. ExPASy TrEMBL
Match:
A0A6J1E279 (uncharacterized protein LOC111429897 OS=Cucurbita moschata OX=3662 GN=LOC111429897 PE=4 SV=1)
HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132
Identity = 248/253 (98.02%), Postives = 249/253 (98.42%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGT+KSKLQMMKQKKMTLIA
Sbjct: 95 MKKM--KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTVKSKLQMMKQKKMTLIA 154
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAIS IN
Sbjct: 155 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISDIN 214
Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 180
QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT
Sbjct: 215 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDIT 274
Query: 181 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDE QNDIKILACRGIGDGPSRAGK
Sbjct: 275 PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEPQNDIKILACRGIGDGPSRAGK 334
Query: 241 RKISWQDQVALRV 254
RKISWQDQVALRV
Sbjct: 335 RKISWQDQVALRV 345
BLAST of Carg10000 vs. ExPASy TrEMBL
Match:
A0A6J1JK01 (uncharacterized protein LOC111485789 OS=Cucurbita maxima OX=3661 GN=LOC111485789 PE=4 SV=1)
HSP 1 Score: 451.4 bits (1160), Expect = 2.4e-123
Identity = 234/258 (90.70%), Postives = 244/258 (94.57%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM KGAAAL QYPVYEDPKARFKH GLLHDYQVLEKETGT+K+KLQMMKQKKMTLIA
Sbjct: 1 MKKM--KGAAALFQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKNKLQMMKQKKMTLIA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHN-----NKKGKNVARRRPALQPVMA 120
EVRFLRKRYEYLMNNQLST +H+SNGDLMQQK+FHN NKKGK+ ARRRPALQPVMA
Sbjct: 61 EVRFLRKRYEYLMNNQLSTNDHHSNGDLMQQKEFHNQVANDNKKGKSAARRRPALQPVMA 120
Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYS 180
IS INQKERIDKGFS+PLQNSTPIPVLDLNQKAKTSSRKKANQQ+ TPVFDLNQKERMYS
Sbjct: 121 ISDINQKERIDKGFSIPLQNSTPIPVLDLNQKAKTSSRKKANQQSSTPVFDLNQKERMYS 180
Query: 181 ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
ERDITPFFDLNQISIEEEELQTRYEPLS VELKKSLL+GGNDEQQN+IKILACRGIGDGP
Sbjct: 181 ERDITPFFDLNQISIEEEELQTRYEPLSVVELKKSLLQGGNDEQQNNIKILACRGIGDGP 240
Query: 241 SRAGKRKISWQDQVALRV 254
SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 256
BLAST of Carg10000 vs. ExPASy TrEMBL
Match:
A0A5A7T0V7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00530 PE=4 SV=1)
HSP 1 Score: 367.5 bits (942), Expect = 4.6e-98
Identity = 203/263 (77.19%), Postives = 214/263 (81.37%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM+ +SQYPVYED K RFKH LL DY LEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1 MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQ-----FHNNKKGKNVARRRPALQPVMA 120
EVRFLRKRYEYLM NQ STK+HYSNG+ +QQKQ +NNKK KN RRR ALQP+
Sbjct: 61 EVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPT 120
Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERM-- 180
IS INQKERID +P+QNSTPIPVLDLNQKAKTSSRKKANQ N PVFDLNQKERM
Sbjct: 121 ISDINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCS 180
Query: 181 ---YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
SER+ITPFFDLNQISIEEEELQT YEPL ELKKSLLRGGNDEQQNDIKI ACR
Sbjct: 181 GRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240
Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255
BLAST of Carg10000 vs. ExPASy TrEMBL
Match:
A0A1S3B8I5 (uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=4 SV=1)
HSP 1 Score: 367.5 bits (942), Expect = 4.6e-98
Identity = 203/263 (77.19%), Postives = 214/263 (81.37%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM+ +SQYPVYED K RFKH LL DY LEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1 MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQ-----FHNNKKGKNVARRRPALQPVMA 120
EVRFLRKRYEYLM NQ STK+HYSNG+ +QQKQ +NNKK KN RRR ALQP+
Sbjct: 61 EVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPT 120
Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERM-- 180
IS INQKERID +P+QNSTPIPVLDLNQKAKTSSRKKANQ N PVFDLNQKERM
Sbjct: 121 ISDINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCS 180
Query: 181 ---YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
SER+ITPFFDLNQISIEEEELQT YEPL ELKKSLLRGGNDEQQNDIKI ACR
Sbjct: 181 GRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240
Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255
BLAST of Carg10000 vs. ExPASy TrEMBL
Match:
A0A0A0LW13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1)
HSP 1 Score: 367.1 bits (941), Expect = 6.0e-98
Identity = 202/263 (76.81%), Postives = 216/263 (82.13%), Query Frame = 0
Query: 1 MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
MKKM+ +SQYPVYED K RFKH LL DY LEKETGT+K KLQMMKQKKMTL+A
Sbjct: 1 MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMA 60
Query: 61 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQF-----HNNKKGKNVARRRPALQPVMA 120
EVRFLRKRYEYLM NQ STK+HYSN + +QQKQ+ +NNKKGKN RRR AL+P+
Sbjct: 61 EVRFLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPT 120
Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERM-- 180
IS INQKERID +PLQNSTPIPVLDLNQKAKTSSRKKA+Q N TPVFDLNQKERM
Sbjct: 121 ISDINQKERID----MPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCS 180
Query: 181 ---YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
SER+ITPFFDLNQISIEEEELQT YEPL ELKKSLLRGGNDEQQNDIKI ACR
Sbjct: 181 GRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240
Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255
BLAST of Carg10000 vs. TAIR 10
Match:
AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 100.5 bits (249), Expect = 2.0e-21
Identity = 80/237 (33.76%), Postives = 113/237 (47.68%), Query Frame = 0
Query: 18 YEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQL 77
+EDPK RF+HH L+ DY L ET ++ +LQ ++++K TL+AEVRFLR+RY +L +Q
Sbjct: 16 FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQ- 75
Query: 78 STKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNST 137
+ K+ + GK + + +S N+ E K S+P
Sbjct: 76 ----------PQEIKKVRRSNGGKKIR---------VEVSPSNKSEAETKHVSLP----- 135
Query: 138 PIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQT 197
DLN K K + + P+FDLNQ E T D NQ + EE +
Sbjct: 136 -----DLNHSEKAHDETKTSPKRRVPLFDLNQISG--EEEQETEAVDNNQENTRVEESNS 195
Query: 198 RYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQV-ALRV 254
K L+ + QQ D+K +CR G+G + KRKISWQD V ALRV
Sbjct: 196 ----------CKRLMISSIEMQQKDVKPSSCRNGGNG---SNKRKISWQDPVAALRV 207
BLAST of Carg10000 vs. TAIR 10
Match:
AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 85.5 bits (210), Expect = 6.7e-17
Identity = 77/223 (34.53%), Postives = 110/223 (49.33%), Query Frame = 0
Query: 37 LEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQ-LSTKEHY-----SNGDLMQ 96
LEKE + +L+M+KQK++TL +EVRFLR+RYE+L +Q L T S G +
Sbjct: 27 LEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEVP 86
Query: 97 QKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT 156
+K KK V P + + N+KE + + + DL++K K
Sbjct: 87 RKPSGERKKQSGVRASVPCFDLKLKNTICNEKEAL----------ANNVASCDLDKKRK- 146
Query: 157 SSRKKANQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKS 216
SR P + DLN E S D P FDLNQIS EEEE + E + A +K +
Sbjct: 147 RSRGSDVLTFPVSLPDLN-GEGNTSGTDKVPGFDLNQISREEEEPEVNGEHMVAEAMKNA 206
Query: 217 LLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV 254
+L + + K+ C + +RA KRK++WQD VAL V
Sbjct: 207 MLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVALSV 237
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7023440.1 | 1.4e-136 | 100.00 | hypothetical protein SDJN02_14465 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6589768.1 | 5.3e-133 | 98.81 | hypothetical protein SDJN03_15191, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022921741.1 | 3.4e-132 | 98.02 | uncharacterized protein LOC111429897 [Cucurbita moschata] | [more] |
XP_023516535.1 | 2.8e-126 | 94.57 | uncharacterized protein LOC111780386 [Cucurbita pepo subsp. pepo] | [more] |
XP_022988590.1 | 5.0e-123 | 90.70 | uncharacterized protein LOC111485789 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E279 | 1.7e-132 | 98.02 | uncharacterized protein LOC111429897 OS=Cucurbita moschata OX=3662 GN=LOC1114298... | [more] |
A0A6J1JK01 | 2.4e-123 | 90.70 | uncharacterized protein LOC111485789 OS=Cucurbita maxima OX=3661 GN=LOC111485789... | [more] |
A0A5A7T0V7 | 4.6e-98 | 77.19 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B8I5 | 4.6e-98 | 77.19 | uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=... | [more] |
A0A0A0LW13 | 6.0e-98 | 76.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G57910.1 | 2.0e-21 | 33.76 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G30630.1 | 6.7e-17 | 34.53 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |