Carg09961 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09961
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic
Location	Carg_Chr10: 2324270 .. 2325637 (-)
RNA-Seq Expression	Carg09961
Synteny	Carg09961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGATGAGGGAGAAGATAAACCAGGCGGACGCCTCCGCCTCCCACCGTTGGTATTTTTGCACGCCTTATCGTCGTCTCCATGTCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCTTCAATCATTCATCTCGCTCGCCTATTTCATGGAGTTTCTGCAGACCTATCTCAGATTCTTCGCCTTTTTGCTCTATTTTCACCTCTTCTCGGCAGCGACGACAAGTATCCGCCTCGGTTGCCTTTAATCCGTCCGGAAAATTTGATCTCTCTTTGCAAGATGATGAAGATGGTAAATCCTCGAATTGATTCTGATTCAATTTCTGATTTGTTCTGTACCTATTTCGGTTTGTGCATTCCAGAGATAGATAGGGGGATTTTTTTTTTCAATCCATGAACGTTGAATGAATTGCATGGGTCAATTATTTGGTTAGGTTTATAATTAGTCATTGGAATATTGCTCTGTTCTTTGGTTCTTCGCTTCCATTTTCTTGATGATGATAATCAAATCCATTGCTGCTCTTGGAGAAAAGGAAAATATGAACTATTAGGCAGATTTAATGGTATGGAAACTAAAGAAAAGGAAGAACAATTGTAGTGGTGATATGTTGGGGAGTTCTTCAAATTTTGATGAGTTTGAACTGATTGTTAAAAACAGATTCTTCTAAAGTTTCACCTCCAATGCCACCTACTGAAGGTCGGTTCGACGTGGTGATAGATAACGATGTAATTCGTCATCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTAGTAAGTTTTGGGTTGTAAATTTGTTTTGAAATGAGTTCTGTGATCCCTGATGAGTTCTCTTTCCTAGTATTGTTACAGCTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACAATCAATTATACCCGAGAAGATCCTCACGATCGACGTGAATTATCCGAATACCCTGACATAAGACTGTGGTTTGTGAGGCTTGATTCAGAGTATCCATGGCTACCAGTTTTACTGGACTGGAGAGCGGGAGAGCTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGGTGATGTTAGTGATGGCATGCTAAGAAAATGTTCTTATTAACATGGACTCATTTGGGATCTTTTTGGTTGCAGATTAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

mRNA sequence

ATGGAGGAAGATGAGGGAGAAGATAAACCAGGCGGACGCCTCCGCCTCCCACCGTTGGTATTTTTGCACGCCTTATCGTCGTCTCCATGTCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCTTCAATCATTCATCTCGCTCGCCTATTTCATGGAGTTTCTGCAGACCTATCTCAGATTCTTCGCCTTTTTGCTCTATTTTCACCTCTTCTCGGCAGCGACGACAAGTATCCGCCTCGGTTGCCTTTAATCCGTCCGGAAAATTTGATCTCTCTTTGCAAGATGATGAAGATGGTAAATCCTCGAATTGATTCTGATTCAATTTCTGATTTGTTCTGTACCTATTTCGATTCTTCTAAAGTTTCACCTCCAATGCCACCTACTGAAGGTCGGTTCGACGTGGTGATAGATAACGATGTAATTCGTCATCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTAGTAATATTGTTACAGCTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACAATCAATTATACCCGAGAAGATCCTCACGATCGACGTGAATTATCCGAATACCCTGACATAAGACTGTGGTTTGTGAGGCTTGATTCAGAGTATCCATGGCTACCAGTTTTACTGGACTGGAGAGCGGGAGAGCTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGATTAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

Coding sequence (CDS)

ATGGAGGAAGATGAGGGAGAAGATAAACCAGGCGGACGCCTCCGCCTCCCACCGTTGGTATTTTTGCACGCCTTATCGTCGTCTCCATGTCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCTTCAATCATTCATCTCGCTCGCCTATTTCATGGAGTTTCTGCAGACCTATCTCAGATTCTTCGCCTTTTTGCTCTATTTTCACCTCTTCTCGGCAGCGACGACAAGTATCCGCCTCGGTTGCCTTTAATCCGTCCGGAAAATTTGATCTCTCTTTGCAAGATGATGAAGATGGTAAATCCTCGAATTGATTCTGATTCAATTTCTGATTTGTTCTGTACCTATTTCGATTCTTCTAAAGTTTCACCTCCAATGCCACCTACTGAAGGTCGGTTCGACGTGGTGATAGATAACGATGTAATTCGTCATCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTAGTAATATTGTTACAGCTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACAATCAATTATACCCGAGAAGATCCTCACGATCGACGTGAATTATCCGAATACCCTGACATAAGACTGTGGTTTGTGAGGCTTGATTCAGAGTATCCATGGCTACCAGTTTTACTGGACTGGAGAGCGGGAGAGCTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGATTAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

Protein sequence

MEEDEGEDKPGGRLRLPPLVFLHALSSSPCPLPPLNLCFHFLLPSIIHLARLFHGVSADLSQILRLFALFSPLLGSDDKYPPRLPLIRPENLISLCKMMKMVNPRIDSDSISDLFCTYFDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLIDQHPVAPP

Homology

[Close]

BLAST of Carg09961 vs. NCBI nr
Match: KAG7023476.1 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 630.6 bits (1625), Expect = 7.3e-177
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEEDEGEDKPGGRLRLPPLVFLHALSSSPCPLPPLNLCFHFLLPSIIHLARLFHGVSADL 60
           MEEDEGEDKPGGRLRLPPLVFLHALSSSPCPLPPLNLCFHFLLPSIIHLARLFHGVSADL
Sbjct: 1   MEEDEGEDKPGGRLRLPPLVFLHALSSSPCPLPPLNLCFHFLLPSIIHLARLFHGVSADL 60

Query: 61  SQILRLFALFSPLLGSDDKYPPRLPLIRPENLISLCKMMKMVNPRIDSDSISDLFCTYFD 120
           SQILRLFALFSPLLGSDDKYPPRLPLIRPENLISLCKMMKMVNPRIDSDSISDLFCTYFD
Sbjct: 61  SQILRLFALFSPLLGSDDKYPPRLPLIRPENLISLCKMMKMVNPRIDSDSISDLFCTYFD 120

Query: 121 SSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTIG 180
           SSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTIG
Sbjct: 121 SSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTIG 180

Query: 181 FTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQIS 240
           FTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQIS
Sbjct: 181 FTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQIS 240

Query: 241 MRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLIDQ 300
           MRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLIDQ
Sbjct: 241 MRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLIDQ 300

Query: 301 HPVAPP 307
           HPVAPP
Sbjct: 301 HPVAPP 306

[Close]

BLAST of Carg09961 vs. NCBI nr
Match: KAG6589804.1 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-99
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 253 QHPVAPP 254

[Close]

BLAST of Carg09961 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-99
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 253 QHPVAPP 254

[Close]

BLAST of Carg09961 vs. NCBI nr
Match: XP_023515428.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-99
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 253 QHPVAPP 254

[Close]

BLAST of Carg09961 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 368.6 bits (945), Expect = 5.1e-98
Identity = 178/187 (95.19%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLK+HDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPV PP
Sbjct: 253 QHPVVPP 254

[Close]

BLAST of Carg09961 vs. ExPASy Swiss-Prot
Match: O82258 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.5e-79
Identity = 139/182 (76.37%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV PPMPPT GR++VVIDND I  LDLS FQ+  GI SP   +   AEPK++L+RTI
Sbjct: 66  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSP--DDFGVAEPKRYLDRTI 125

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINY REDP D RELSEYPD+RLWFVRLD+ YPWLP+LLDWRAGELARYAAMLVPHQ+
Sbjct: 126 GFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQM 185

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           S+RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 186 SLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLID 245

Query: 300 QH 302
            +
Sbjct: 246 HN 245

[Close]

BLAST of Carg09961 vs. ExPASy TrEMBL
Match: A0A6J1E1R8 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430041 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 7.7e-100
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 253 QHPVAPP 254

[Close]

BLAST of Carg09961 vs. ExPASy TrEMBL
Match: A0A6J1JFH1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485264 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.5e-98
Identity = 178/187 (95.19%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLK+HDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPV PP
Sbjct: 253 QHPVVPP 254

[Close]

BLAST of Carg09961 vs. ExPASy TrEMBL
Match: A0A5A7U6R5 (Protein CHLORORESPIRATORY REDUCTION 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00840 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 4.4e-95
Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 10  DSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLAT-----EPKQFLERTI 69

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 70  GFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQI 129

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGDELFDLID
Sbjct: 130 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFDLID 189

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 190 QHPVAPP 191

[Close]

BLAST of Carg09961 vs. ExPASy TrEMBL
Match: A0A1S3B982 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 4.4e-95
Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 70  DSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLAT-----EPKQFLERTI 129

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 130 GFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQI 189

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGDELFDLID
Sbjct: 190 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFDLID 249

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 250 QHPVAPP 251

[Close]

BLAST of Carg09961 vs. ExPASy TrEMBL
Match: A0A0A0LTF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 7.5e-95
Identity = 173/187 (92.51%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DSSKV+PPMPPTEGRFDVVIDND IR LDLSSFQ TTGI+SPLA+     EPKQFLERTI
Sbjct: 73  DSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 253 QHPVAPP 254

[Close]

BLAST of Carg09961 vs. TAIR 10
Match: AT2G47910.1 (chlororespiratory reduction 6 )

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-80
Identity = 139/182 (76.37%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV PPMPPT GR++VVIDND I  LDLS FQ+  GI SP   +   AEPK++L+RTI
Sbjct: 66  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSP--DDFGVAEPKRYLDRTI 125

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINY REDP D RELSEYPD+RLWFVRLD+ YPWLP+LLDWRAGELARYAAMLVPHQ+
Sbjct: 126 GFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQM 185

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           S+RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 186 SLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLID 245

Query: 300 QH 302
            +
Sbjct: 246 HN 245

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BLAST of Carg09961 vs. TAIR 10
Match: AT2G47910.2 (chlororespiratory reduction 6 )

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-80
Identity = 139/182 (76.37%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV PPMPPT GR++VVIDND I  LDLS FQ+  GI SP   +   AEPK++L+RTI
Sbjct: 18  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSP--DDFGVAEPKRYLDRTI 77

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINY REDP D RELSEYPD+RLWFVRLD+ YPWLP+LLDWRAGELARYAAMLVPHQ+
Sbjct: 78  GFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQM 137

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           S+RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 138 SLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLID 197

Query: 300 QH 302
            +
Sbjct: 198 HN 197

The following BLAST results are available for this feature:

BLAST of Carg09961 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023476.1	7.3e-177	100.00	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyros...	[more]
KAG6589804.1	1.6e-99	96.79	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyros...	[more]
XP_022921932.1	1.6e-99	96.79	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch...	[more]
XP_023515428.1	1.6e-99	96.79	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo...	[more]
XP_022987841.1	5.1e-98	95.19	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim...	[more]

BLAST of Carg09961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82258	1.5e-79	76.37	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of Carg09961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1R8	7.7e-100	96.79	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita mos...	[more]
A0A6J1JFH1	2.5e-98	95.19	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita max...	[more]
A0A5A7U6R5	4.4e-95	93.05	Protein CHLORORESPIRATORY REDUCTION 6 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B982	4.4e-95	93.05	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LTF0	7.5e-95	92.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1	[more]

BLAST of Carg09961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47910.1	1.0e-80	76.37	chlororespiratory reduction 6	[more]
AT2G47910.2	1.0e-80	76.37	chlororespiratory reduction 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014946	Protein chlororespiratory reduction 6	PFAM	PF08847	Crr6	coord: 139..297 e-value: 1.0E-58 score: 197.2
IPR014946	Protein chlororespiratory reduction 6	PANTHER	PTHR35724	PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTIC	coord: 119..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09961-RA	Carg09961-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010275	NAD(P)H dehydrogenase complex assembly
cellular_component	GO:0009507	chloroplast