Carg09956 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09956
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SAM domain-containing protein
Location	Carg_Chr10: 2339058 .. 2339849 (-)
RNA-Seq Expression	Carg09956
Synteny	Carg09956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACTTACGAATACGGCCTCGTTTTCGCCCGAAATGGCCTCAGACCCGAAGACATTCCTCGTTTCAACCACGATTTTCTCCAGAAAATCGGAGTTTCCATCGCCAAACACAGGCTCGAGATTCTGAAACTCGCCAAATGCAACAGAGAAGAAGCCACCCAAAAGAAACTGCTCCTTTCCGCTTTCGTCAAGACAAAGAACTGCCTCCGGAACTGCCTCAGGAAGCTTATTTTCACCAACGCCAAGTCGGAGAAGGGGATTTTCCGGGAGGACGCGGCGGTGGTTTCCCCAGAGCCGATTACCTACAGCGAGGATCTCAGCCGGAAACTGGAGGTTAAGGAGGTGCTCAAGCCGCCGAAACGACGCAGTAAACACGTGTCGCTGTCCGGGCCGTTGGACGGGAGAACGCACGAGAAGTTAATGACGAACAGTAAAAGCCTAAAGCTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCATGTTTCCAAGAAGCCCGAGATCATCTGGGCCTCTGGATGGGAGAGTATCTGATTGGGCCTCGAGTAGAAGCCCAAAGCTGAATGGACCGCCGCAGGGGAGAATGATGAGGCTGATACCGCCGAGCAGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAGTTTGCTGTCGTTGTAATAGAGAGAGGATGGAAACCGACGATGATTATCACTCATTGTGGGTTTCATTGTTCTATGACATGAAGCCCACTTGA

mRNA sequence

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACTTACGAATACGGCCTCGTTTTCGCCCGAAATGGCCTCAGACCCGAAGACATTCCTCGTTTCAACCACGATTTTCTCCAGAAAATCGGAGTTTCCATCGCCAAACACAGGCTCGAGATTCTGAAACTCGCCAAATGCAACAGAGAAGAAGCCACCCAAAAGAAACTGCTCCTTTCCGCTTTCGTCAAGACAAAGAACTGCCTCCGGAACTGCCTCAGGAAGCTTATTTTCACCAACGCCAAGTCGGAGAAGGGGATTTTCCGGGAGGACGCGGCGGTGGTTTCCCCAGAGCCGATTACCTACAGCGAGGATCTCAGCCGGAAACTGGAGGTTAAGGAGGTGCTCAAGCCGCCGAAACGACGCAGTAAACACGTGTCGCTGTCCGGGCCGTTGGACGGGAGAACGCACGAGAAGTTAATGACGAACAGTAAAAGCCTAAAGCTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCATGTTTCCAAGAAGCCCGAGATCATCTGGGCCTCTGGATGGGAGAGTATCTGATTGGGCCTCGAGTAGAAGCCCAAAGCTGAATGGACCGCCGCAGGGGAGAATGATGAGGCTGATACCGCCGAGCAGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAGTTTGCTGTCGTTGTAATAGAGAGAGGATGGAAACCGACGATGATTATCACTCATTGTGGGTTTCATTGTTCTATGACATGAAGCCCACTTGA

Coding sequence (CDS)

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACTTACGAATACGGCCTCGTTTTCGCCCGAAATGGCCTCAGACCCGAAGACATTCCTCGTTTCAACCACGATTTTCTCCAGAAAATCGGAGTTTCCATCGCCAAACACAGGCTCGAGATTCTGAAACTCGCCAAATGCAACAGAGAAGAAGCCACCCAAAAGAAACTGCTCCTTTCCGCTTTCGTCAAGACAAAGAACTGCCTCCGGAACTGCCTCAGGAAGCTTATTTTCACCAACGCCAAGTCGGAGAAGGGGATTTTCCGGGAGGACGCGGCGGTGGTTTCCCCAGAGCCGATTACCTACAGCGAGGATCTCAGCCGGAAACTGGAGGTTAAGGAGGTGCTCAAGCCGCCGAAACGACGCAGTAAACACGTGTCGCTGTCCGGGCCGTTGGACGGGAGAACGCACGAGAAGTTAATGACGAACAGTAAAAGCCTAAAGCTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCATGTTTCCAAGAAGCCCGAGATCATCTGGGCCTCTGGATGGGAGAGTATCTGATTGGGCCTCGAGTAGAAGCCCAAAGCTGAATGGACCGCCGCAGGGGAGAATGATGAGGCTGATACCGCCGAGCAGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAGTTTGCTGTCGTTGTAATAGAGAGAGGATGGAAACCGACGATGATTATCACTCATTGTGGGTTTCATTGTTCTATGACATGAAGCCCACTTGA

Protein sequence

MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLAKCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSEDLSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT

Homology

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BLAST of Carg09956 vs. NCBI nr
Match: KAG7023481.1 (hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537.0 bits (1382), Expect = 9.4e-149
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180
           LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180

Query: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240
           RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR
Sbjct: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 ERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of Carg09956 vs. NCBI nr
Match: KAG6589808.1 (hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 536.6 bits (1381), Expect = 1.2e-148
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180
           LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180

Query: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240
           RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPR+CCRCNR
Sbjct: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRCNR 240

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 ERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of Carg09956 vs. NCBI nr
Match: XP_022960905.1 (uncharacterized protein LOC111461567 [Cucurbita moschata])

HSP 1 Score: 531.6 bits (1368), Expect = 3.9e-147
Identity = 259/263 (98.48%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEAT+KKLLLSAF KTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180
           LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 199

Query: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240
           RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPR+CCRCNR
Sbjct: 200 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRCNR 259

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 ERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of Carg09956 vs. NCBI nr
Match: XP_023516525.1 (uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.6 bits (1368), Expect = 3.9e-147
Identity = 258/263 (98.10%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEATQKKLLLSAF KTKNCLRNCLRKLIFTNAKSEKGIFREDAAV+SPEPITYSED
Sbjct: 80  KCDREEATQKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 139

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180
           LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 199

Query: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240
           RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP++CCRCNR
Sbjct: 200 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPKICCRCNR 259

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 ERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of Carg09956 vs. NCBI nr
Match: XP_022987839.1 (uncharacterized protein LOC111485262 [Cucurbita maxima])

HSP 1 Score: 516.9 bits (1330), Expect = 1.0e-142
Identity = 251/263 (95.44%), Postives = 257/263 (97.72%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGL+PEDIPRFNHDFLQ+IGVSIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLKPEDIPRFNHDFLQRIGVSIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEATQKKLLLSA  KTKNCLRNCLRKLIFTNAKSEKGIFREDAAV+SPEPITYSED
Sbjct: 61  KCDREEATQKKLLLSALAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180
           LSRK EVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPM PRSP
Sbjct: 121 LSRKQEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMVPRSP 180

Query: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240
           R SGPLDGRVSDWASSRSPK+NGPPQGRMMRLIPPSRSPRVS PLDGRDGSPR+CCRCNR
Sbjct: 181 RLSGPLDGRVSDWASSRSPKMNGPPQGRMMRLIPPSRSPRVSEPLDGRDGSPRICCRCNR 240

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 ERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of Carg09956 vs. ExPASy TrEMBL
Match: A0A6J1HAF4 (uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC111461567 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.9e-147
Identity = 259/263 (98.48%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEAT+KKLLLSAF KTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180
           LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 199

Query: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240
           RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPR+CCRCNR
Sbjct: 200 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRCNR 259

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 ERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of Carg09956 vs. ExPASy TrEMBL
Match: A0A6J1JJY8 (uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 4.9e-143
Identity = 251/263 (95.44%), Postives = 257/263 (97.72%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGL+PEDIPRFNHDFLQ+IGVSIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLKPEDIPRFNHDFLQRIGVSIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEATQKKLLLSA  KTKNCLRNCLRKLIFTNAKSEKGIFREDAAV+SPEPITYSED
Sbjct: 61  KCDREEATQKKLLLSALAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSP 180
           LSRK EVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPM PRSP
Sbjct: 121 LSRKQEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMVPRSP 180

Query: 181 RSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNR 240
           R SGPLDGRVSDWASSRSPK+NGPPQGRMMRLIPPSRSPRVS PLDGRDGSPR+CCRCNR
Sbjct: 181 RLSGPLDGRVSDWASSRSPKMNGPPQGRMMRLIPPSRSPRVSEPLDGRDGSPRICCRCNR 240

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 ERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of Carg09956 vs. ExPASy TrEMBL
Match: A0A6J1C2N7 (uncharacterized protein LOC111006885 OS=Momordica charantia OX=3673 GN=LOC111006885 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.9e-116
Identity = 211/272 (77.57%), Postives = 233/272 (85.66%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG+RPEDIPRFNHDFL KIGVS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60

Query: 61  KCNREEATQKKL-----LLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPI 120
           K   EE   KK      L+SAF KTK CLRNC+RKL+ +N K E+ +FRE  A +SPE +
Sbjct: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPETM 120

Query: 121 TYSEDLSRKLEVKEV--LKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER 180
           +YSE+L RK EV+EV   KP  RR K+VSLSGPLDGR HEK MTN KSLKLSGPLDRKER
Sbjct: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180

Query: 181 PMFPRSPRSSGPLDGRVSDW--ASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGS 240
           PMF RSPR+SGPLDGRVSDW  AS++SPK NGPPQG+MMRLIP SRSPRVSGPLDGRDGS
Sbjct: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240

Query: 241 PRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           PR+CCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272

[Close]

BLAST of Carg09956 vs. ExPASy TrEMBL
Match: A0A0A0LTT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264010 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.8e-105
Identity = 201/275 (73.09%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPL+TYEYGL+FARN L+PEDIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLYTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           K +  +      L+SAF KTK CLRNCLR+LI  +   EK        ++SPEP   S D
Sbjct: 61  KSHTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPALEK-------PIISPEPPPSSLD 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER------- 180
              K++VKEVLKPP+RRSKHVSLSGPLD RTHEK + +SKSLKLSGPLDRKER       
Sbjct: 121 -EPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERAPSSPSP 180

Query: 181 ----PMFPRSPRSSGPLDGRVSDWA-SSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
               PMF RSPR+SGPLDGR+SDW+ S++SPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFTRSPRTSGPLDGRISDWSLSNKSPKMNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           DGSPR+CCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 266

[Close]

BLAST of Carg09956 vs. ExPASy TrEMBL
Match: A0A5A7U992 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00390 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.1e-105
Identity = 202/276 (73.19%), Postives = 226/276 (81.88%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L+PEDIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KCN-REEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSE 120
           K +   +      L+SAF KTK CLRNCLR+LI  +   +K        ++SPEP   S 
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 DLSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER------ 180
           D   K++VKEVLKPP+RRSKHVSLSGPLD RTHEK + +SKSLKLSGPLDRKER      
Sbjct: 121 D-EPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPS 180

Query: 181 -----PMFPRSPRSSGPLDGRVSDWA-SSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDG 240
                PMFPRSPR+SGPLDGR+SDW  S++SPK+NGPPQGRMMRLIPPSRSPRVSGPLDG
Sbjct: 181 PSPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDG 240

Query: 241 RDGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           RDGSPR+CCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 RDGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of Carg09956 vs. TAIR 10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-30
Identity = 98/283 (34.63%), Postives = 146/283 (51.59%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLS+T LDP  +YEYGL+FA+  L+ EDI  FNH+FL+++GV++ KHR+EILKL+
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61  KCNREEATQ------KKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEP 120
           K   +  +          L+S  +K    + N L K +     +     +E     SP P
Sbjct: 61  KRETQALSSYNHRPVSAKLISVVIKATKSVGNRLNKWLSLGGTAVVEPLKEKQ---SPPP 120

Query: 121 --------ITYSEDLSRKLEVKEVLKPPKRRSKHVSLSGPLD---GRTHEKLMTNSKSLK 180
                      +  ++ +  V +V + P  + K +  SGPLD   G   +  + +++S+ 
Sbjct: 121 AYRTGAFLTGNNNKVNAEKAVVQVERLPVIKRKRIVKSGPLDRNHGIQEKMTLVSNRSMN 180

Query: 181 LSGPLDR--KERPMFP-RSPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPR 240
           LSGPLDR  +ER +   RSP  SG LDG +++                  RL       R
Sbjct: 181 LSGPLDRSVQERLILAYRSPIVSGQLDGNLNE------------------RL-------R 240

Query: 241 VSGPLDGRDGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           +SGPL GR  SP V    N+     DDD  + W ++F+++KPT
Sbjct: 241 LSGPLKGRPPSPSVYVEYNKR----DDD--TRWDAMFHNLKPT 249

[Close]

BLAST of Carg09956 vs. TAIR 10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-19
Identity = 51/96 (53.12%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 1  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
          MDWFSWLSRT L+    YEYGL F+ N L  EDI  FNH+FLQ +G+SIAKHRLEILKLA
Sbjct: 1  MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61 KCNREEA--TQKKL--LLSAFVKTKNCLRNCLRKLI 93
          + +R+ +  T + +  +L A  KT  C    +R  I
Sbjct: 61 RRDRKPSPLTARSIFRVLIAIKKTGKCFSEHVRAWI 96

[Close]

BLAST of Carg09956 vs. TAIR 10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-19
Identity = 48/95 (50.53%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 3  WFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLAKC 62
          WFSWLSRT L+P   +EYGL F++N L  EDI  F+H+FLQ +G+SIAKHRLEILKLA+ 
Sbjct: 5  WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63 NREEA---TQKKL--LLSAFVKTKNCLRNCLRKLI 93
          +R+ +   T + +  +++A  KT+ CL + +R  I
Sbjct: 65 DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWI 99

The following BLAST results are available for this feature:

BLAST of Carg09956 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023481.1	9.4e-149	100.00	hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589808.1	1.2e-148	99.62	hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960905.1	3.9e-147	98.48	uncharacterized protein LOC111461567 [Cucurbita moschata]	[more]
XP_023516525.1	3.9e-147	98.10	uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo]	[more]
XP_022987839.1	1.0e-142	95.44	uncharacterized protein LOC111485262 [Cucurbita maxima]	[more]

BLAST of Carg09956 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg09956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAF4	1.9e-147	98.48	uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]
A0A6J1JJY8	4.9e-143	95.44	uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262...	[more]
A0A6J1C2N7	3.9e-116	77.57	uncharacterized protein LOC111006885 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0LTT1	1.8e-105	73.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264010 PE=4 SV=1	[more]
A0A5A7U992	3.1e-105	73.19	Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Carg09956 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G12462.1	3.2e-30	34.63	BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-con...	[more]
AT1G80520.1	3.3e-19	53.13	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G15760.1	5.7e-19	50.53	Sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	PFAM	PF07647	SAM_2	coord: 6..62 e-value: 8.5E-5 score: 22.6
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 1..69 e-value: 8.5E-10 score: 40.1
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 12..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..230
None	No IPR available	PANTHER	PTHR33915	OSJNBA0033G05.11 PROTEIN	coord: 1..263
None	No IPR available	PANTHER	PTHR33915:SF3	STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN	coord: 1..263
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 2..62 e-value: 5.03225E-9 score: 49.5453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09956-RA	Carg09956-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding