Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTGACATATTTCCAAAGAGTAAAAGGAGCGAAAAACAGTCGCCGACGGTGCTCTTACTACCAGTCGCCGACGGTGCTCTTACGACCAGTCGCCGACGCTGAAGCCGGACCGCGTGTGTTGGAGGAAACATGGAGAGGGCTGAGGGAGGAACGTCGTCGACACCATACGGCGGTGGAGGAATCGGAGGCAAAGTTCGTAAGCCAAACACAAGAAAGCCGCTGCCTTCCCCTTACGCTCGGCCAGTGCATAACCAATCGCATAGGCGTTGGCTTTCGAAGCTCGTTGATCTGCCTACCGGCTCATTACCGGCGGAGCCACCCGATTGCTTCCATATTTGTTCCCGAAACCACTGCCCTCTAATGCCCTTCCGTCTCCTGGAGACGAAGATCAAGGTCATTTGCGCTCTCCCCCAATCTTCTCTACTGCTTTGGGTTTTGGACATCGCATTATCTTGGTTGAAATCATTATCCTTTTTATACTCTCTATTTTAATTTTAGGCATTTTAGGAAATTGATGGCTTTTATGATCCTAGTTAACTGACTGGTGAGGTTTCTAATTTTTTCCCCTTCGTAAGCATCTTTCTGCATTTGCAACGTAAAATTTCTAATTGACATAAGTGAAAGTATTGTAGCTATGTTGTTACCATGCTGCTTGCATATATCTAGTAGACATTGTTTACATCAGACTCCAGAGAATGTTATTATTGGTTTGTTTTGTACATTCTCTTGTAAGATTAGTTGTTGATGTGAATTCTTTTTTAGCAGATAAAGTGGAGGCAGAGGTGGAGGATAACGTCTCTGGAGAAGAACCCCAAAATGTAAATGTAGCTCACATTTTTGCTGTGATGCCGTCTTATGAATGAGTATCAGGGTATTGTTTTGATAACAGACAAATGAATAGTCATATCCAAAAGTGCTTACTGGGGTTTTATCAAAATGAGATAGAAGTCAATCGAAATAAAAGACATAGGGCAAGGGTTACCCACTCTTAACAGTCACTTTTTGCTGGTGGCCGTACTTTGATTGGTTTGTAGCCTAGAAGTTTATTACTGTTTTGACCTTGTGAGTGCGCTCATGCTTGTCTTCCAGCTGAAGTTATTGATCTTCCATTAAACTTTGATGTTCAGTCAGATGTTGATATTTGTTTTCTGCGTGAAATCTGACTGTTTACTAGTTTAAATTTTATTTACCAGGTGTCGTTTTTTTTTTTTCTCTTGTTTCACTTTTCTGTATAGCAATATTCTTATTCTGGTCCTTATGGCTTGGAGTTACAAAATCACATTGCTTGTCCGAACTTTTTGGTTAACACCCACGGAATGATTTCCTATGTCCTGTTTTTGTTTTTATTTCATTCCATTTTACACTTTTACTTTTCATTTGAAAAATTATATGCATGCAATAATGTGATTCATCAACATACAGCCTGGTTCATTTCTTGCAGCTAGGGGTTTCTACCTTAGTTGGATTACCTGGTTCTAGTGGAGAGGCAAATAGATCAGAGAACAATTCTGATTTTAATGGCTGCCAAAAGGACAAAGAAAATAATGCATTAGGCGGGAATGGAAAAATTGATGTTGAAAAATGGATCCAAGGAAAAACATTTTCGAGGTAACTTGCAGAGTTTGACTATTTTGTTTGTTCTATCAACGAAGTGGTGTGTCATTTATTGTCTAAGAAACATGGACATGGACACAATCCAACATGATATTGATGTAGATATGATGACTCATTTACTAACAAATTTAGACAGAGACATGACGAGGACTTGTTTGGTAAAATATCCATTTTCTGATTATATTTCTACAGATCTCAATAATTTACAGACAGAAAGTGTATTTTAATTTTACAATATTGGTGTTTGGAAGTCAGTTTGAAAGTGATATAATATGCAATATTTTGAAGAAGTTGAAGAAGCCAATCCCAACACATGCTTGACTAGTATCTGAGTTGTCCACAACACGTGAAACCAAATCATGATCCCTAAACTATAGTGTGTTCATCTTCAACTTTTTCATCACAGACTTCAGTTGAAGTGTTTCGTCTCGTTGAAATGCAACTGGACGAAACATTATTGTGAAGCAACTTATTTTATTTATAATTCCATGGTGGTAGTACTTTCCTCTGCTATGAATAAATAGGTTATTTGATTTTGAGGTTGCATCCAAGGGATAGTCAAATGTCCATATATAGCAGTGTCAGTAGTCTCAATAATTTCATTTGCAACAATATTTAATAGCATTGCCTCTGTGTCTAAACTGGTAATGGTGCAATGCCTTATGTCCGTCCAAGGGTAGTCAAGCGTCCAATATTGGTGTTCTACCATATGCTGGTAGTGGTGCAATGTCTGTAGTCTCTTTTGATCCTCTTAAACATTTTCCACGGCCACATAGCCAGTTTGAGTACTGCATTTCTCTAAATTGGCTGATATACTATGCAGGGATGAAGTGAGTCGTTTATTAGAGGTACTACGATCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGACAATACATTTTCCCCACAGAGCATTGAAAAACAAGTTGAGCAGCCATCTACTGCAAATAGAGTTCTTGAAATGCCTCGTGAAGGAAAGCAAGAAGAATTGGAGAGAGCTACGGGGGGAAACTTAACTCCTCATCCACATTCATTGGTCAGTAGGGTGAATCCTTGAGTAGTTTCTATAGAAAGTAAATATTTCCTGCTGTTATGAACTCAGAACTTCTTTTACACATTAGTGCGGACTGTAGGATTATTTCTGCCATTTTCACGATAGCTTATGTTCCTTTTATAGGTTTTATTAGTTCATGCTAGTATTTAGCGATTGTGTGTAATGCTGTTCCATAGACAGTGTTCTTTTTCTATATATATGTCTATACACACACACACAAATTTGAAGATCAAAAAATCATCCTAGGTAACTTATTTCTGTATTCATTAATAGTATAATGTATTAAACATCAAGGAGACCGGTTCCAGTATTGGGATGGTCAAAAACTAGATCAAACTGAATGCCTTATCCATTACTACACGATTACTAGGTTTTTCATATTTATAGTTATATTCAAGTTATTGTTTTAGGACTCTTCTTATTACTAAGTAATTAAATTATGTAGAAGATATCTGAAAATCAAATTGTAAAACTAGTGCTGATGAGACATTCATTAATCAAATCAGTAAAATGAATTATCTCTGTTAGGAATATGGTAAATTTGGTTAATGTTGGAAAATCAATAGGAAATTAAGATGTTAAAGCTCTAGGATTGGGATTTGTACAAGAATCTACAAATCTTCATTGCCAAAGTTTTCAATTTTTGTTCACTGTTTAGAGCTTGCTATTCAAGTTTTTCTGCCTCTAATAATTCAGCATTGAGTGTACTTTAGCAGAAACTAAGAGAAGTTGGAGCATCACCTGTGGATATTGCAAGCGCATACATGAGCAACCAAAAATCTGAACCAGGCTTAGCTTCGGACAAGATGCCAGATGATGAAAAGGCTTTGCGTCATGGTGATCATCAAATGTTTAAGCCTTTTATTCCATCAATGTCCCCCAATCCTTCAACTTGTTGGCCTGGTGCCATGTCAGAAAGTCAACGTGGTTATGTAACTCCAAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCAATGTCCAAATCCAAGTCTAAGGTATATAGAAACGGTCTTCAATTCCATTTTTTTTGGGTTATGACCTAGTGTATGTAACCAGACCATATGATTAACCATTCCTTTACATGTTAACAGCTAACTCAGTTGCAAGGAGATGGCCAAAAGTTTGTGAATACACCATCACCTCTCTGGCAGAGGTCACGATCTCCAGCTTATTCCATGGTAATTTCTTTTATCATTAAGCACTCAATGACTAAAAGCCAATAATATATGACCACAGGAACTCTTGTTGAGAAGTTCTTTTGTAGCATGTATATTGAGCTTCTGTACAGAACAAATTTGCGTCCATAATGAGTAGCCATTTTAAGGTAGTATAAAAGCTGATCATTTTAACGAGAAGAATAAAAGCTGAAATATTATAGAGAACTGTAGTATACTTTTTGTGCATGTGTATTACAGGGTAGAGCTAGAAACTTCTGTAGGGGAGGGCAAAATTTTACACTTGAACTTCCAAAATACGCTATTTTAATTTTCAAAATTCCAAAGGCAAGTTATAGGAAAAACTATTAACTTAAAAAACTTGGTGGTTTTATGTATGTATGACTCCCGTATTGAGCATGTCATTTATGTGTTATTGACCCTTCAACCTTTACTTTGACCGAAATATTCAGTTATCCTTGATCTTTTGTTTCTTTCATCCGCTTTCTGGTAGGATGTACATTGACCTTGCGGTTTATCCATTACCTTGGTGCCTCTATGAAAATGTGGCTATGGTTGTTGCTGTTGTGCTGCTTTGTCAAGCCCAAGTATAATTCTTTTGCCATAACCCTGATATAAACAAGTTAGATTTATGATTTTTCATCTAAACTAGAACTTAACTGATTAGCTGCAAGAGTTTCCTTATCTATGGGCCTATAGGTGGTTGCTTAATTTTTAATTATTGAGCAACTCATTCCAGGACGAGCTTTTAGTTCAGTTTGTAGTGGTGAAGTGTCTGATTGTACGTTAAGTTCTGAATGCAACTTTCGATACTGAATATTGCATTAATGCTTCCTGAGCATTATCCGCTGCTGGTTCTTATTAGTGGTTTGCATTTGTAGTGTGCCAAGCTCAAGTTCCTTCCGATTACTTCTATCATTATTATTTTTTCTGTTTGTCTATATAGATGACTTCAAGCAAGGATCCATTGGATGAGGCAACTGGTTCCATTGGACTGACTTGTAGCCTTCAGCATAAGGCATCTGCAGTTACTAATTCCAGACGATCTGCTTACTTTTATCCACCTCAACAACCAGAGATGGAAATAGAGAACAATATTTCGGAAGCAATTTTCCCCGATATGAAGAAGAATCTAGATCGTGGAGGAGCAAGCACCATTCCTCTATCACAATCAGTGGGAATCAACAACTCTGAGTCGAGTCTACCGACTGTCCGTCCACAGTCCAGTCAGGTTGCTAGGACAATCCTAGAGCATATTACTAGAAACCCACCTACTCCTAAAGAAAAGACTGAAGAGTTAAAGAGAGCAATTGAATGGAAGAAAACCCCATCTGCCAATGTACCATCGGTCAAGCCAAATGAAACCAGTAGTTTGGCCGTAGACATAGATTCTCACCAAAAAGCAAACCAAGTAGATCAGAACTGTCACCCCCAATTGAGCGATGAGGGGAAAACCATGTCCACGGTTCTTCCAAAGGAGGGTGCTGGCAGAAATCCTGATGCTGCAAACCAGAATCCTTACGGTCTGAAGTTTAGGTTTAGCAATGCTGAATCAAAACACAAGGATGATGCAGGCTTAAATATTGGCAGCTCCTCGCCTAAGGTATCACTGCAACTTTGTAATTGGTTTTAGTTATTTAAATGTATTACTGACCGACTTACAGATGCTTCTTGTGTATGTATTTTGATATTATTAGCATATGCTTGAAGAGTTCTTAATTTCTGGTTGAATTTATGGGCAGGCTGTTCCCAAGATCTTTCCAGCTCTTGGATCCGAAGTGTGGACTCAAATCAAGCCTTCCCCCTCTCTTGGAGGTAAACCTATTTTTCCATCCATTACGATCAGCAAGCCCGAGTCAAAATGGGCATTTTCTTCCGACAGTGGTTCGGCATTTACTTTCCCTGTTTCGGGAGCATCCTCAGGAATGCTCTCAGAACCACCAAGACCATCTATCTTTCCATCAACCAGCCTTGGGGGAGGTCAGCCTCTGTTATTGAAGCCTGAGACTCCAGTTCCTTCATACAGTTTTGATTCAAAGAAGATCCAGCCCTAGCCTTGTTTTCTCATTCCCTTCAATAAACAGTGATACAATCGGCCCTGAAGCCTCAAATATTAAGTTTAGCTTTGGATCCGATGATCATACGAGACTTTCCTTCGGTTCTGTTGGGAAAGATGCAGTTTGTTGCTAACTGGTTAGACTTCTGAAGTATAGTTTTGAGTGGAATGACCACAAGAATTGCCAAAACGGGGTTAGAAACTAGTGCCAAATACCCTAGTGTTTATGAACAAATAGGAAATTGCAAACTCAATCATAAACAGTAAACAGCCTCAGTGCCAGTTGACGGCTTTATGCATATGTTCCATTCCATTCCATTCATGATTATGTTATCAGGGCAATGCTTTAGTTTCCTGTACATTAGTTTGGATTTGATCAAGCTGTCACATCATTAAGTAAGAACAGGATTCCTCATTTAAGTTTGCTTGGTTTGATGTTTGAAGCAGGCAGAGTAGTTTCACCACATGTGAAGAGTTTGATGTAGATTCCCAAAGAATTCCAGAAAAATCTGGGAAAAGGGAATGGGATACCTACCTACATCCTAGTTCCTTCCTACGCATGAAAGAAAGAAGTAGATATCTGAATAGATGA
mRNA sequence
AGTTGACATATTTCCAAAGAGTAAAAGGAGCGAAAAACAGTCGCCGACGGTGCTCTTACTACCAGTCGCCGACGGTGCTCTTACGACCAGTCGCCGACGCTGAAGCCGGACCGCGTGTGTTGGAGGAAACATGGAGAGGGCTGAGGGAGGAACGTCGTCGACACCATACGGCGGTGGAGGAATCGGAGGCAAAGTTCGTAAGCCAAACACAAGAAAGCCGCTGCCTTCCCCTTACGCTCGGCCAGTGCATAACCAATCGCATAGGCGTTGGCTTTCGAAGCTCGTTGATCTGCCTACCGGCTCATTACCGGCGGAGCCACCCGATTGCTTCCATATTTGTTCCCGAAACCACTGCCCTCTAATGCCCTTCCGTCTCCTGGAGACGAAGATCAAGACTCCAGAGAATGTTATTATTGATAAAGTGGAGGCAGAGGTGGAGGATAACGTCTCTGGAGAAGAACCCCAAAATCTAGGGGTTTCTACCTTAGTTGGATTACCTGGTTCTAGTGGAGAGGCAAATAGATCAGAGAACAATTCTGATTTTAATGGCTGCCAAAAGGACAAAGAAAATAATGCATTAGGCGGGAATGGAAAAATTGATGTTGAAAAATGGATCCAAGGAAAAACATTTTCGAGGGATGAAGTGAGTCGTTTATTAGAGGTACTACGATCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGACAATACATTTTCCCCACAGAGCATTGAAAAACAAGTTGAGCAGCCATCTACTGCAAATAGAGTTCTTGAAATGCCTCGTGAAGGAAAGCAAGAAGAATTGGAGAGAGCTACGGGGGGAAACTTAACTCCTCATCCACATTCATTGGTCAGTAGGTATAATGTATTAAACATCAAGGAGACCGGTTCCAGTATTGGGATGAAACTAAGAGAAGTTGGAGCATCACCTGTGGATATTGCAAGCGCATACATGAGCAACCAAAAATCTGAACCAGGCTTAGCTTCGGACAAGATGCCAGATGATGAAAAGGCTTTGCGTCATGGTGATCATCAAATGTTTAAGCCTTTTATTCCATCAATGTCCCCCAATCCTTCAACTTGTTGGCCTGGTGCCATGTCAGAAAGTCAACGTGGTTATGTAACTCCAAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCAATGTCCAAATCCAAGTCTAAGCTAACTCAGTTGCAAGGAGATGGCCAAAAGTTTGTGAATACACCATCACCTCTCTGGCAGAGGTCACGATCTCCAGCTTATTCCATGATGACTTCAAGCAAGGATCCATTGGATGAGGCAACTGGTTCCATTGGACTGACTTGTAGCCTTCAGCATAAGGCATCTGCAGTTACTAATTCCAGACGATCTGCTTACTTTTATCCACCTCAACAACCAGAGATGGAAATAGAGAACAATATTTCGGAAGCAATTTTCCCCGATATGAAGAAGAATCTAGATCGTGGAGGAGCAAGCACCATTCCTCTATCACAATCAGTGGGAATCAACAACTCTGAGTCGAGTCTACCGACTGTCCGTCCACAGTCCAGTCAGGTTGCTAGGACAATCCTAGAGCATATTACTAGAAACCCACCTACTCCTAAAGAAAAGACTGAAGAGTTAAAGAGAGCAATTGAATGGAAGAAAACCCCATCTGCCAATGTACCATCGGTCAAGCCAAATGAAACCAGTAGTTTGGCCGTAGACATAGATTCTCACCAAAAAGCAAACCAAGTAGATCAGAACTGTCACCCCCAATTGAGCGATGAGGGGAAAACCATGTCCACGGTTCTTCCAAAGGAGGGTGCTGGCAGAAATCCTGATGCTGCAAACCAGAATCCTTACGGTCTGAAGTTTAGGTTTAGCAATGCTGAATCAAAACACAAGGATGATGCAGGCTTAAATATTGGCAGCTCCTCGCCTAAGGCTGTTCCCAAGATCTTTCCAGCTCTTGGATCCGAAGTGTGGACTCAAATCAAGCCTTCCCCCTCTCTTGGAGGTAAACCTATTTTTCCATCCATTACGATCAGCAAGCCCGAGTCAAAATGGGCATTTTCTTCCGACAGTGGTTCGGCATTTACTTTCCCTGTTTCGGGAGCATCCTCAGGAATGCTCTCAGAACCACCAAGACCATCTATCTTTCCATCAACCAGCCTTGGGGGAGGTCAGCCTCTGCAGAGTAGTTTCACCACATGTGAAGAGTTTGATGTAGATTCCCAAAGAATTCCAGAAAAATCTGGGAAAAGGGAATGGGATACCTACCTACATCCTAGTTCCTTCCTACGCATGAAAGAAAGAAGTAGATATCTGAATAGATGA
Coding sequence (CDS)
ATGGAGAGGGCTGAGGGAGGAACGTCGTCGACACCATACGGCGGTGGAGGAATCGGAGGCAAAGTTCGTAAGCCAAACACAAGAAAGCCGCTGCCTTCCCCTTACGCTCGGCCAGTGCATAACCAATCGCATAGGCGTTGGCTTTCGAAGCTCGTTGATCTGCCTACCGGCTCATTACCGGCGGAGCCACCCGATTGCTTCCATATTTGTTCCCGAAACCACTGCCCTCTAATGCCCTTCCGTCTCCTGGAGACGAAGATCAAGACTCCAGAGAATGTTATTATTGATAAAGTGGAGGCAGAGGTGGAGGATAACGTCTCTGGAGAAGAACCCCAAAATCTAGGGGTTTCTACCTTAGTTGGATTACCTGGTTCTAGTGGAGAGGCAAATAGATCAGAGAACAATTCTGATTTTAATGGCTGCCAAAAGGACAAAGAAAATAATGCATTAGGCGGGAATGGAAAAATTGATGTTGAAAAATGGATCCAAGGAAAAACATTTTCGAGGGATGAAGTGAGTCGTTTATTAGAGGTACTACGATCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGACAATACATTTTCCCCACAGAGCATTGAAAAACAAGTTGAGCAGCCATCTACTGCAAATAGAGTTCTTGAAATGCCTCGTGAAGGAAAGCAAGAAGAATTGGAGAGAGCTACGGGGGGAAACTTAACTCCTCATCCACATTCATTGGTCAGTAGGTATAATGTATTAAACATCAAGGAGACCGGTTCCAGTATTGGGATGAAACTAAGAGAAGTTGGAGCATCACCTGTGGATATTGCAAGCGCATACATGAGCAACCAAAAATCTGAACCAGGCTTAGCTTCGGACAAGATGCCAGATGATGAAAAGGCTTTGCGTCATGGTGATCATCAAATGTTTAAGCCTTTTATTCCATCAATGTCCCCCAATCCTTCAACTTGTTGGCCTGGTGCCATGTCAGAAAGTCAACGTGGTTATGTAACTCCAAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCAATGTCCAAATCCAAGTCTAAGCTAACTCAGTTGCAAGGAGATGGCCAAAAGTTTGTGAATACACCATCACCTCTCTGGCAGAGGTCACGATCTCCAGCTTATTCCATGATGACTTCAAGCAAGGATCCATTGGATGAGGCAACTGGTTCCATTGGACTGACTTGTAGCCTTCAGCATAAGGCATCTGCAGTTACTAATTCCAGACGATCTGCTTACTTTTATCCACCTCAACAACCAGAGATGGAAATAGAGAACAATATTTCGGAAGCAATTTTCCCCGATATGAAGAAGAATCTAGATCGTGGAGGAGCAAGCACCATTCCTCTATCACAATCAGTGGGAATCAACAACTCTGAGTCGAGTCTACCGACTGTCCGTCCACAGTCCAGTCAGGTTGCTAGGACAATCCTAGAGCATATTACTAGAAACCCACCTACTCCTAAAGAAAAGACTGAAGAGTTAAAGAGAGCAATTGAATGGAAGAAAACCCCATCTGCCAATGTACCATCGGTCAAGCCAAATGAAACCAGTAGTTTGGCCGTAGACATAGATTCTCACCAAAAAGCAAACCAAGTAGATCAGAACTGTCACCCCCAATTGAGCGATGAGGGGAAAACCATGTCCACGGTTCTTCCAAAGGAGGGTGCTGGCAGAAATCCTGATGCTGCAAACCAGAATCCTTACGGTCTGAAGTTTAGGTTTAGCAATGCTGAATCAAAACACAAGGATGATGCAGGCTTAAATATTGGCAGCTCCTCGCCTAAGGCTGTTCCCAAGATCTTTCCAGCTCTTGGATCCGAAGTGTGGACTCAAATCAAGCCTTCCCCCTCTCTTGGAGGTAAACCTATTTTTCCATCCATTACGATCAGCAAGCCCGAGTCAAAATGGGCATTTTCTTCCGACAGTGGTTCGGCATTTACTTTCCCTGTTTCGGGAGCATCCTCAGGAATGCTCTCAGAACCACCAAGACCATCTATCTTTCCATCAACCAGCCTTGGGGGAGGTCAGCCTCTGCAGAGTAGTTTCACCACATGTGAAGAGTTTGATGTAGATTCCCAAAGAATTCCAGAAAAATCTGGGAAAAGGGAATGGGATACCTACCTACATCCTAGTTCCTTCCTACGCATGAAAGAAAGAAGTAGATATCTGAATAGATGA
Protein sequence
MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVDLPTGSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGVSTLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLLEVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPHPHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFSMSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESKHKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQPLQSSFTTCEEFDVDSQRIPEKSGKREWDTYLHPSSFLRMKERSRYLNR
Homology
BLAST of Carg09922 vs. NCBI nr
Match:
KAG7023514.1 (Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1471.8 bits (3809), Expect = 0.0e+00
Identity = 741/741 (100.00%), Postives = 741/741 (100.00%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVDLPTGSLP 60
MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVDLPTGSLP
Sbjct: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVDLPTGSLP 60
Query: 61 AEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGVSTLV 120
AEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGVSTLV
Sbjct: 61 AEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGVSTLV 120
Query: 121 GLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLLEVLR 180
GLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLLEVLR
Sbjct: 121 GLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLLEVLR 180
Query: 181 SRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPHPHSL 240
SRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPHPHSL
Sbjct: 181 SRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPHPHSL 240
Query: 241 VSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKALRHGD 300
VSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKALRHGD
Sbjct: 241 VSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKALRHGD 300
Query: 301 HQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFSMSKS 360
HQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFSMSKS
Sbjct: 301 HQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFSMSKS 360
Query: 361 KSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHKASAV 420
KSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHKASAV
Sbjct: 361 KSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHKASAV 420
Query: 421 TNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSESSLPT 480
TNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSESSLPT
Sbjct: 421 TNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSESSLPT 480
Query: 481 VRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLAVDID 540
VRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLAVDID
Sbjct: 481 VRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLAVDID 540
Query: 541 SHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESKHKDD 600
SHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESKHKDD
Sbjct: 541 SHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESKHKDD 600
Query: 601 AGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSSDSGS 660
AGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSSDSGS
Sbjct: 601 AGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSSDSGS 660
Query: 661 AFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQPLQSSFTTCEEFDVDSQRIPEKSGKREW 720
AFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQPLQSSFTTCEEFDVDSQRIPEKSGKREW
Sbjct: 661 AFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQPLQSSFTTCEEFDVDSQRIPEKSGKREW 720
Query: 721 DTYLHPSSFLRMKERSRYLNR 742
DTYLHPSSFLRMKERSRYLNR
Sbjct: 721 DTYLHPSSFLRMKERSRYLNR 741
BLAST of Carg09922 vs. NCBI nr
Match:
XP_022960828.1 (nuclear pore complex protein NUP1-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1216.1 bits (3145), Expect = 0.0e+00
Identity = 637/715 (89.09%), Postives = 646/715 (90.35%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVD----LPT 60
MERAEGGTSSTPYGGGGIGGKVRKPN+RKPLPSPYARPVHNQSHRRWLSKLVD L T
Sbjct: 1 MERAEGGTSSTPYGGGGIGGKVRKPNSRKPLPSPYARPVHNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGV 120
G P F P L + +P + DKVEAEVEDNVSGEEPQNLGV
Sbjct: 61 GGATRLLPYLF-----------PKPLPSNALPSPGDEDQDKVEAEVEDNVSGEEPQNLGV 120
Query: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL
Sbjct: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
Query: 181 EVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
EVL+SRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH
Sbjct: 181 EVLQSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
Query: 241 PHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKAL 300
PHSL KLREVGASPVDIA AYMSNQKSEPGLASDKMPDDEKAL
Sbjct: 241 PHSL------------------KLREVGASPVDIARAYMSNQKSEPGLASDKMPDDEKAL 300
Query: 301 RHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
RHGDHQMFKPFIPSMSPNPSTCWP AMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS
Sbjct: 301 RHGDHQMFKPFIPSMSPNPSTCWPSAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
Query: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHK 420
MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSP YSMMTSSKDPLDEATGSIGLTCSLQHK
Sbjct: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPTYSMMTSSKDPLDEATGSIGLTCSLQHK 420
Query: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES
Sbjct: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
Query: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
SLPTVRPQSSQV RTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA
Sbjct: 481 SLPTVRPQSSQVVRTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
Query: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESK 600
VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFR SNAESK
Sbjct: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRLSNAESK 600
Query: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS 660
HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS
Sbjct: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS 660
Query: 661 DSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQP-LQSSFTTCEEFDVDSQR 711
DSGSAFTFPVSGASSGMLSEPP PSIFPSTSLGGGQP L + T + DS++
Sbjct: 661 DSGSAFTFPVSGASSGMLSEPPTPSIFPSTSLGGGQPLLLKTETPVPSYSFDSKK 686
BLAST of Carg09922 vs. NCBI nr
Match:
XP_023515697.1 (nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515698.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1169.5 bits (3024), Expect = 0.0e+00
Identity = 613/698 (87.82%), Postives = 627/698 (89.83%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVD----LPT 60
MERAEGGTSSTPY GGG+GGKVRKPNTRKP PSPYARPVHNQS RRWLSKLVD L T
Sbjct: 1 MERAEGGTSSTPYVGGGVGGKVRKPNTRKPPPSPYARPVHNQSQRRWLSKLVDPTYRLIT 60
Query: 61 GSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGV 120
G P F P L + +P + DKVEAEVEDNVSGEEPQN GV
Sbjct: 61 GGATRLLPYLF-----------PKPLPSNALPSPGDEDQDKVEAEVEDNVSGEEPQNQGV 120
Query: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
STLVGLPGSSGEANRSEN+SDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL
Sbjct: 121 STLVGLPGSSGEANRSENDSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
Query: 181 EVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
EVL+SRALEPSNKVEDNTFSPQSIEKQVE PSTANRVLEMPREGKQEELERAT GNLTP
Sbjct: 181 EVLQSRALEPSNKVEDNTFSPQSIEKQVEPPSTANRVLEMPREGKQEELERATWGNLTPR 240
Query: 241 PHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKAL 300
PHSL KLREVGASPVDIA AYMSNQKSEPGLASDKMPDDEKAL
Sbjct: 241 PHSL------------------KLREVGASPVDIARAYMSNQKSEPGLASDKMPDDEKAL 300
Query: 301 RHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
RHGDHQM PFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS
Sbjct: 301 RHGDHQMSMPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
Query: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHK 420
MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYS+MTSSKDPLDE TGSIGLTCSLQHK
Sbjct: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSVMTSSKDPLDEGTGSIGLTCSLQHK 420
Query: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
ASA TNSRRSAYFYPPQQPEME+ENNISEAIFPDMKKNL+RGGAS IPLSQSVGINNSES
Sbjct: 421 ASAATNSRRSAYFYPPQQPEMEVENNISEAIFPDMKKNLERGGASIIPLSQSVGINNSES 480
Query: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRA+EWKKTPS+NV SVKPNETSSLA
Sbjct: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAVEWKKTPSSNVLSVKPNETSSLA 540
Query: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESK 600
VD+DSHQKANQVDQNCHPQLSD+GKTMSTVLPKEGAG NPDAANQNPYGLKFR SNAESK
Sbjct: 541 VDVDSHQKANQVDQNCHPQLSDKGKTMSTVLPKEGAGINPDAANQNPYGLKFRLSNAESK 600
Query: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS 660
HKDDAGLNIGSSSPKAVPKIFPALGSEV TQIKPSPSLGGKPIFPSITI+KPESKWAFSS
Sbjct: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVGTQIKPSPSLGGKPIFPSITINKPESKWAFSS 660
Query: 661 DSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQPL 695
DSGSAFTFPVSGASSGMLSEPP PSIFPSTSLGGGQPL
Sbjct: 661 DSGSAFTFPVSGASSGMLSEPPTPSIFPSTSLGGGQPL 669
BLAST of Carg09922 vs. NCBI nr
Match:
XP_022987623.1 (nuclear pore complex protein NUP1-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 611/698 (87.54%), Postives = 625/698 (89.54%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVD----LPT 60
MERAEGGTSSTPYGGGG+GGKVRKPNTRKP PSPYARPVHNQS RRWLSKLVD L T
Sbjct: 1 MERAEGGTSSTPYGGGGVGGKVRKPNTRKPPPSPYARPVHNQSQRRWLSKLVDPAYRLIT 60
Query: 61 GSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGV 120
G P F P L + +P + DKVE EVEDNVSGEEPQN GV
Sbjct: 61 GGATRLLPYLF-----------PKPLPSNALPSPGDEDQDKVEVEVEDNVSGEEPQNKGV 120
Query: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
STLVGLPGSSGEANRSEN+SDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL
Sbjct: 121 STLVGLPGSSGEANRSENDSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
Query: 181 EVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
VL+SRALEPSNKVEDNTFSPQSIEKQVEQ STANRVLEMPREGKQEELERAT GNLTPH
Sbjct: 181 VVLQSRALEPSNKVEDNTFSPQSIEKQVEQLSTANRVLEMPREGKQEELERATWGNLTPH 240
Query: 241 PHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKAL 300
PHSL KLREVGASPVDIA YMSNQKSEPGLASDKMPDDEKAL
Sbjct: 241 PHSL------------------KLREVGASPVDIARVYMSNQKSEPGLASDKMPDDEKAL 300
Query: 301 RHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
RHGDHQM KPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS
Sbjct: 301 RHGDHQMPKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
Query: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHK 420
MSKSKSKLTQLQGD QKFVNTPSPLW+RSRSPAYSMMTSSKDPLDEATGSIGLT SLQHK
Sbjct: 361 MSKSKSKLTQLQGDDQKFVNTPSPLWRRSRSPAYSMMTSSKDPLDEATGSIGLTSSLQHK 420
Query: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
SAVTNSRRSAYFYPPQQPEME+ENNISEAIFPDMKKNL+RGGASTIPLSQSVGINNSES
Sbjct: 421 TSAVTNSRRSAYFYPPQQPEMEVENNISEAIFPDMKKNLERGGASTIPLSQSVGINNSES 480
Query: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
SLPT+RPQSSQVARTILEHITRNPPTPKEKTEELKRAI+WKKTPS+NV SVKPNETSSLA
Sbjct: 481 SLPTLRPQSSQVARTILEHITRNPPTPKEKTEELKRAIDWKKTPSSNVLSVKPNETSSLA 540
Query: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESK 600
VDIDSHQKANQVDQNCHPQLSD+GKTMSTVLPKEGAGRNPDAANQNPY LKFR SNAESK
Sbjct: 541 VDIDSHQKANQVDQNCHPQLSDKGKTMSTVLPKEGAGRNPDAANQNPYCLKFRLSNAESK 600
Query: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS 660
HKDDAGLNIGSSSPKAVPKIF ALGSEV TQIK SPSLGGKPIFPSITI+KPESKWAFSS
Sbjct: 601 HKDDAGLNIGSSSPKAVPKIFRALGSEVGTQIKHSPSLGGKPIFPSITINKPESKWAFSS 660
Query: 661 DSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQPL 695
DSGSAFTFPVSGASSGMLSEPP PSIFPSTSLGGGQPL
Sbjct: 661 DSGSAFTFPVSGASSGMLSEPPTPSIFPSTSLGGGQPL 669
BLAST of Carg09922 vs. NCBI nr
Match:
KAG6589842.1 (Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 592/656 (90.24%), Postives = 596/656 (90.85%), Query Frame = 0
Query: 39 VHNQSHRRWLSKLVD----LPTGSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVI 98
V +RWLSKLVD L TG P F P L + +P +
Sbjct: 60 VEESEAKRWLSKLVDPAYRLITGGATRLLPYLF-----------PKPLPSNALPSPGDED 119
Query: 99 IDKVEAEVEDNVSGEEPQNLGVSTLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNG 158
DKVEAEVEDNVSGEEPQNLGVSTLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNG
Sbjct: 120 QDKVEAEVEDNVSGEEPQNLGVSTLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNG 179
Query: 159 KIDVEKWIQGKTFSRDEVSRLLEVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVL 218
KIDVEKWIQGKTFSRDEVSRLLEVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVL
Sbjct: 180 KIDVEKWIQGKTFSRDEVSRLLEVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVL 239
Query: 219 EMPREGKQEELERATGGNLTPHPHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAY 278
EMPREGKQEELERATGGNLTPHPHSL KLREVGASPVDIA AY
Sbjct: 240 EMPREGKQEELERATGGNLTPHPHSL------------------KLREVGASPVDIARAY 299
Query: 279 MSNQKSEPGLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPR 338
MSNQKSEPGLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPR
Sbjct: 300 MSNQKSEPGLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPR 359
Query: 339 SQRGRFGLHNFPRTPYSRSIFSMSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMT 398
SQRGRFGLHNFPRTPYSRSIFSMSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMT
Sbjct: 360 SQRGRFGLHNFPRTPYSRSIFSMSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMT 419
Query: 399 SSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKN 458
SSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKN
Sbjct: 420 SSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKN 479
Query: 459 LDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAI 518
LDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAI
Sbjct: 480 LDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAI 539
Query: 519 EWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGR 578
EWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGR
Sbjct: 540 EWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGR 599
Query: 579 NPDAANQNPYGLKFRFSNAESKHKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSL 638
NPDAANQNPYGLKFR SNAESKHKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSL
Sbjct: 600 NPDAANQNPYGLKFRLSNAESKHKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSL 659
Query: 639 GGKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGG 691
GGKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGG
Sbjct: 660 GGKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGG 686
BLAST of Carg09922 vs. ExPASy Swiss-Prot
Match:
Q9CAF4 (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 7.3e-16
Identity = 194/785 (24.71%), Postives = 284/785 (36.18%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGG-GIGGKVRKPNTRKPLPSPYARPVHNQSHR----------RWLS 60
M A G SS PYGGG G GGK RKP R+ +PY RP + + WLS
Sbjct: 1 MASAARGESSNPYGGGLGTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLS 60
Query: 61 KLVDLPTGSLPAEPPDCFHICSRNHCPL--MPFRLLETKIKTPENVIIDKVEAEVEDNVS 120
KLVD + F SR P + E + + PE + + + +++VS
Sbjct: 61 KLVDPAQRLITYSAQRLFGSLSRKRLGSGETPLQSPEQQKQLPERGVNQETKVGHKEDVS 120
Query: 121 GEEPQNLGVSTLVGLPGSSGEANRSENNSDFNGCQKDKENNAL---GGNGKIDVEKWIQG 180
N S NG + ++ NA +G D+EK +QG
Sbjct: 121 --------------------------NLSMKNGLIRMEDTNASVDPPKDGFTDLEKILQG 180
Query: 181 KTFSRDEVSRLLEVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEE 240
KTF+R EV RL +LRS+A + S E+ + V P + R P G
Sbjct: 181 KTFTRSEVDRLTTLLRSKAADSSTMNEEQR---NEVGMVVRHPPSHERDRTHPDNGSMNT 240
Query: 241 LERATGGNLTPHPHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEP-- 300
L G+L L E ASP +A AYM ++ SE
Sbjct: 241 LVSTPPGSL------------------------RTLDECIASPAQLAKAYMGSRPSEVTP 300
Query: 301 ---GLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPS-TCWPGAMSESQRGYVTPRSQRG 360
GL +D L PF P SP S P + G+VTPRS RG
Sbjct: 301 SMLGLRGQAGREDSVFLNR------TPF-PQKSPTMSLVTKPSGQRPLENGFVTPRS-RG 360
Query: 361 RFGLHNFPRTPYSR--------SIFSMSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAY 420
R +++ RTPYSR S+F S SK + + G Q F S L +RS
Sbjct: 361 RSAVYSMARTPYSRPQSSVKIGSLFQASPSKWEESLPSGSRQGF---QSGLKRRS----- 420
Query: 421 SMMTSSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPD 480
LD GS+G ++ K++ + S P + + + N
Sbjct: 421 -------SVLDNDIGSVGPVRRIRQKSNLSSRS----LALPVSESPLSVRAN-------- 480
Query: 481 MKKNLDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVARTILEH----ITRNPPTPKEK 540
GG T S+ + SS V +SS++A IL+ ++ +P +
Sbjct: 481 -------GGEKTTHTSKDSAEDIPGSSFNLVPTKSSEMASKILQQLDKLVSTREKSPSKL 540
Query: 541 TEELKRAIEWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQN--CHPQLSDEGKTMS 600
+ + R K + P N A DS + ++ + L+ KT
Sbjct: 541 SPSMLRGPALKSLQNVEAPKFLGNLPEKKANSPDSSYQKQEISRESVSREVLAQSEKTGD 600
Query: 601 TV--LPKEGAGRNPDAANQN-------------PYGLKFRFSNAESKHKDDAGLNIGSSS 660
V K G+ ++ D + P FR S E + D L S+
Sbjct: 601 AVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFRMSAHEDFLELDDDLGAASTP 660
Query: 661 PKAVPK--IFPALGSEVWTQIKPSPSLGGKPIFPSITI-----------SKPESKWAFSS 719
+ K F S + S +G KP+ PS + S+ S + +
Sbjct: 661 CEVAEKQNAFEVEKSHI------SMPIGEKPLTPSEAMPSTSYISNGDASQGTSNGSLET 673
BLAST of Carg09922 vs. ExPASy TrEMBL
Match:
A0A6J1HA42 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461519 PE=4 SV=1)
HSP 1 Score: 1216.1 bits (3145), Expect = 0.0e+00
Identity = 637/715 (89.09%), Postives = 646/715 (90.35%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVD----LPT 60
MERAEGGTSSTPYGGGGIGGKVRKPN+RKPLPSPYARPVHNQSHRRWLSKLVD L T
Sbjct: 1 MERAEGGTSSTPYGGGGIGGKVRKPNSRKPLPSPYARPVHNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGV 120
G P F P L + +P + DKVEAEVEDNVSGEEPQNLGV
Sbjct: 61 GGATRLLPYLF-----------PKPLPSNALPSPGDEDQDKVEAEVEDNVSGEEPQNLGV 120
Query: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL
Sbjct: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
Query: 181 EVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
EVL+SRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH
Sbjct: 181 EVLQSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
Query: 241 PHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKAL 300
PHSL KLREVGASPVDIA AYMSNQKSEPGLASDKMPDDEKAL
Sbjct: 241 PHSL------------------KLREVGASPVDIARAYMSNQKSEPGLASDKMPDDEKAL 300
Query: 301 RHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
RHGDHQMFKPFIPSMSPNPSTCWP AMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS
Sbjct: 301 RHGDHQMFKPFIPSMSPNPSTCWPSAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
Query: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHK 420
MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSP YSMMTSSKDPLDEATGSIGLTCSLQHK
Sbjct: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPTYSMMTSSKDPLDEATGSIGLTCSLQHK 420
Query: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES
Sbjct: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
Query: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
SLPTVRPQSSQV RTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA
Sbjct: 481 SLPTVRPQSSQVVRTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
Query: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESK 600
VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFR SNAESK
Sbjct: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRLSNAESK 600
Query: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS 660
HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS
Sbjct: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS 660
Query: 661 DSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQP-LQSSFTTCEEFDVDSQR 711
DSGSAFTFPVSGASSGMLSEPP PSIFPSTSLGGGQP L + T + DS++
Sbjct: 661 DSGSAFTFPVSGASSGMLSEPPTPSIFPSTSLGGGQPLLLKTETPVPSYSFDSKK 686
BLAST of Carg09922 vs. ExPASy TrEMBL
Match:
A0A6J1JJZ8 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485124 PE=4 SV=1)
HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 611/698 (87.54%), Postives = 625/698 (89.54%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVD----LPT 60
MERAEGGTSSTPYGGGG+GGKVRKPNTRKP PSPYARPVHNQS RRWLSKLVD L T
Sbjct: 1 MERAEGGTSSTPYGGGGVGGKVRKPNTRKPPPSPYARPVHNQSQRRWLSKLVDPAYRLIT 60
Query: 61 GSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGV 120
G P F P L + +P + DKVE EVEDNVSGEEPQN GV
Sbjct: 61 GGATRLLPYLF-----------PKPLPSNALPSPGDEDQDKVEVEVEDNVSGEEPQNKGV 120
Query: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
STLVGLPGSSGEANRSEN+SDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL
Sbjct: 121 STLVGLPGSSGEANRSENDSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
Query: 181 EVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
VL+SRALEPSNKVEDNTFSPQSIEKQVEQ STANRVLEMPREGKQEELERAT GNLTPH
Sbjct: 181 VVLQSRALEPSNKVEDNTFSPQSIEKQVEQLSTANRVLEMPREGKQEELERATWGNLTPH 240
Query: 241 PHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKAL 300
PHSL KLREVGASPVDIA YMSNQKSEPGLASDKMPDDEKAL
Sbjct: 241 PHSL------------------KLREVGASPVDIARVYMSNQKSEPGLASDKMPDDEKAL 300
Query: 301 RHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
RHGDHQM KPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS
Sbjct: 301 RHGDHQMPKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
Query: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHK 420
MSKSKSKLTQLQGD QKFVNTPSPLW+RSRSPAYSMMTSSKDPLDEATGSIGLT SLQHK
Sbjct: 361 MSKSKSKLTQLQGDDQKFVNTPSPLWRRSRSPAYSMMTSSKDPLDEATGSIGLTSSLQHK 420
Query: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
SAVTNSRRSAYFYPPQQPEME+ENNISEAIFPDMKKNL+RGGASTIPLSQSVGINNSES
Sbjct: 421 TSAVTNSRRSAYFYPPQQPEMEVENNISEAIFPDMKKNLERGGASTIPLSQSVGINNSES 480
Query: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
SLPT+RPQSSQVARTILEHITRNPPTPKEKTEELKRAI+WKKTPS+NV SVKPNETSSLA
Sbjct: 481 SLPTLRPQSSQVARTILEHITRNPPTPKEKTEELKRAIDWKKTPSSNVLSVKPNETSSLA 540
Query: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESK 600
VDIDSHQKANQVDQNCHPQLSD+GKTMSTVLPKEGAGRNPDAANQNPY LKFR SNAESK
Sbjct: 541 VDIDSHQKANQVDQNCHPQLSDKGKTMSTVLPKEGAGRNPDAANQNPYCLKFRLSNAESK 600
Query: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSS 660
HKDDAGLNIGSSSPKAVPKIF ALGSEV TQIK SPSLGGKPIFPSITI+KPESKWAFSS
Sbjct: 601 HKDDAGLNIGSSSPKAVPKIFRALGSEVGTQIKHSPSLGGKPIFPSITINKPESKWAFSS 660
Query: 661 DSGSAFTFPVSGASSGMLSEPPRPSIFPSTSLGGGQPL 695
DSGSAFTFPVSGASSGMLSEPP PSIFPSTSLGGGQPL
Sbjct: 661 DSGSAFTFPVSGASSGMLSEPPTPSIFPSTSLGGGQPL 669
BLAST of Carg09922 vs. ExPASy TrEMBL
Match:
A0A6J1HA80 (nuclear pore complex protein NUP1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461519 PE=4 SV=1)
HSP 1 Score: 1110.1 bits (2870), Expect = 0.0e+00
Identity = 578/647 (89.34%), Postives = 586/647 (90.57%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVD----LPT 60
MERAEGGTSSTPYGGGGIGGKVRKPN+RKPLPSPYARPVHNQSHRRWLSKLVD L T
Sbjct: 1 MERAEGGTSSTPYGGGGIGGKVRKPNSRKPLPSPYARPVHNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGV 120
G P F P L + +P + DKVEAEVEDNVSGEEPQNLGV
Sbjct: 61 GGATRLLPYLF-----------PKPLPSNALPSPGDEDQDKVEAEVEDNVSGEEPQNLGV 120
Query: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL
Sbjct: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
Query: 181 EVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
EVL+SRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH
Sbjct: 181 EVLQSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
Query: 241 PHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKAL 300
PHSL KLREVGASPVDIA AYMSNQKSEPGLASDKMPDDEKAL
Sbjct: 241 PHSL------------------KLREVGASPVDIARAYMSNQKSEPGLASDKMPDDEKAL 300
Query: 301 RHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
RHGDHQMFKPFIPSMSPNPSTCWP AMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS
Sbjct: 301 RHGDHQMFKPFIPSMSPNPSTCWPSAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
Query: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHK 420
MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSP YSMMTSSKDPLDEATGSIGLTCSLQHK
Sbjct: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPTYSMMTSSKDPLDEATGSIGLTCSLQHK 420
Query: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES
Sbjct: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
Query: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
SLPTVRPQSSQV RTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA
Sbjct: 481 SLPTVRPQSSQVVRTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
Query: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESK 600
VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFR SNAESK
Sbjct: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRLSNAESK 600
Query: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSI 644
HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGG+ + P +
Sbjct: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGRVVSPHV 618
BLAST of Carg09922 vs. ExPASy TrEMBL
Match:
A0A6J1HC90 (uncharacterized protein LOC111461519 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461519 PE=4 SV=1)
HSP 1 Score: 1089.7 bits (2817), Expect = 0.0e+00
Identity = 572/634 (90.22%), Postives = 578/634 (91.17%), Query Frame = 0
Query: 78 MPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGVSTLVGLPGSSGEANRSENNSD 137
MPFRLLETKIK E + Q LGVSTLVGLPGSSGEANRSENNSD
Sbjct: 1 MPFRLLETKIKIKWRQRWRITSLEKNPKILVHFLQ-LGVSTLVGLPGSSGEANRSENNSD 60
Query: 138 FNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLLEVLRSRALEPSNKVEDNTFSP 197
FNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLLEVL+SRALEPSNKVEDNTFSP
Sbjct: 61 FNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLLEVLQSRALEPSNKVEDNTFSP 120
Query: 198 QSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPHPHSLVSRYNVLNIKETGSSIG 257
QSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPHPHSL
Sbjct: 121 QSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPHPHSL----------------- 180
Query: 258 MKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPST 317
KLREVGASPVDIA AYMSNQKSEPGLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPST
Sbjct: 181 -KLREVGASPVDIARAYMSNQKSEPGLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPST 240
Query: 318 CWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFSMSKSKSKLTQLQGDGQKFVNT 377
CWP AMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFSMSKSKSKLTQLQGDGQKFVNT
Sbjct: 241 CWPSAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFSMSKSKSKLTQLQGDGQKFVNT 300
Query: 378 PSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEM 437
PSPLWQRSRSP YSMMTSSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEM
Sbjct: 301 PSPLWQRSRSPTYSMMTSSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEM 360
Query: 438 EIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVARTILEHIT 497
EIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSESSLPTVRPQSSQV RTILEHIT
Sbjct: 361 EIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVVRTILEHIT 420
Query: 498 RNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLS 557
RNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLS
Sbjct: 421 RNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLS 480
Query: 558 DEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESKHKDDAGLNIGSSSPKAVPKIF 617
DEGKTMSTVLPKEGAGRNPDAANQNPYGLKFR SNAESKHKDDAGLNIGSSSPKAVPKIF
Sbjct: 481 DEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRLSNAESKHKDDAGLNIGSSSPKAVPKIF 540
Query: 618 PALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEP 677
PALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEP
Sbjct: 541 PALGSEVWTQIKPSPSLGGKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEP 600
Query: 678 PRPSIFPSTSLGGGQP-LQSSFTTCEEFDVDSQR 711
P PSIFPSTSLGGGQP L + T + DS++
Sbjct: 601 PTPSIFPSTSLGGGQPLLLKTETPVPSYSFDSKK 615
BLAST of Carg09922 vs. ExPASy TrEMBL
Match:
A0A6J1JJE0 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485124 PE=4 SV=1)
HSP 1 Score: 1054.3 bits (2725), Expect = 2.4e-304
Identity = 556/647 (85.94%), Postives = 572/647 (88.41%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRRWLSKLVD----LPT 60
MERAEGGTSSTPYGGGG+GGKVRKPNTRKP PSPYARPVHNQS RRWLSKLVD L T
Sbjct: 1 MERAEGGTSSTPYGGGGVGGKVRKPNTRKPPPSPYARPVHNQSQRRWLSKLVDPAYRLIT 60
Query: 61 GSLPAEPPDCFHICSRNHCPLMPFRLLETKIKTPENVIIDKVEAEVEDNVSGEEPQNLGV 120
G P F P L + +P + DKVE EVEDNVSGEEPQN GV
Sbjct: 61 GGATRLLPYLF-----------PKPLPSNALPSPGDEDQDKVEVEVEDNVSGEEPQNKGV 120
Query: 121 STLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
STLVGLPGSSGEANRSEN+SDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL
Sbjct: 121 STLVGLPGSSGEANRSENDSDFNGCQKDKENNALGGNGKIDVEKWIQGKTFSRDEVSRLL 180
Query: 181 EVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLTPH 240
VL+SRALEPSNKVEDNTFSPQSIEKQVEQ STANRVLEMPREGKQEELERAT GNLTPH
Sbjct: 181 VVLQSRALEPSNKVEDNTFSPQSIEKQVEQLSTANRVLEMPREGKQEELERATWGNLTPH 240
Query: 241 PHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEPGLASDKMPDDEKAL 300
PHSL KLREVGASPVDIA YMSNQKSEPGLASDKMPDDEKAL
Sbjct: 241 PHSL------------------KLREVGASPVDIARVYMSNQKSEPGLASDKMPDDEKAL 300
Query: 301 RHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
RHGDHQM KPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS
Sbjct: 301 RHGDHQMPKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRSIFS 360
Query: 361 MSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCSLQHK 420
MSKSKSKLTQLQGD QKFVNTPSPLW+RSRSPAYSMMTSSKDPLDEATGSIGLT SLQHK
Sbjct: 361 MSKSKSKLTQLQGDDQKFVNTPSPLWRRSRSPAYSMMTSSKDPLDEATGSIGLTSSLQHK 420
Query: 421 ASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGINNSES 480
SAVTNSRRSAYFYPPQQPEME+ENNISEAIFPDMKKNL+RGGASTIPLSQSVGINNSES
Sbjct: 421 TSAVTNSRRSAYFYPPQQPEMEVENNISEAIFPDMKKNLERGGASTIPLSQSVGINNSES 480
Query: 481 SLPTVRPQSSQVARTILEHITRNPPTPKEKTEELKRAIEWKKTPSANVPSVKPNETSSLA 540
SLPT+RPQSSQVARTILEHITRNPPTPKEKTEELKRAI+WKKTPS+NV SVKPNETSSLA
Sbjct: 481 SLPTLRPQSSQVARTILEHITRNPPTPKEKTEELKRAIDWKKTPSSNVLSVKPNETSSLA 540
Query: 541 VDIDSHQKANQVDQNCHPQLSDEGKTMSTVLPKEGAGRNPDAANQNPYGLKFRFSNAESK 600
VDIDSHQKANQVDQNCHPQLSD+GKTMSTVLPKEGAGRNPDAANQNPY LKFR SNAESK
Sbjct: 541 VDIDSHQKANQVDQNCHPQLSDKGKTMSTVLPKEGAGRNPDAANQNPYCLKFRLSNAESK 600
Query: 601 HKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIKPSPSLGGKPIFPSI 644
HKDDAGLNIGSSSPKAVPKIF ALGSEV TQIK SPSLGG+ + P +
Sbjct: 601 HKDDAGLNIGSSSPKAVPKIFRALGSEVGTQIKHSPSLGGRVVSPHV 618
BLAST of Carg09922 vs. TAIR 10
Match:
AT5G20200.1 (nucleoporin-related )
HSP 1 Score: 225.3 bits (573), Expect = 1.6e-58
Identity = 225/738 (30.49%), Postives = 348/738 (47.15%), Query Frame = 0
Query: 8 TSSTPYGGGGIGGKVRKPNTRKPLPSPYARPVHNQSHRR-WLSKLVDLPTGSLPAEPPDC 67
T+++ Y GG+GGK+++ + R+ +PY+RP NQ RR W+S++VD PA
Sbjct: 14 TTTSSYPTGGVGGKLKRQSARRHAATPYSRPTQNQVQRRPWISRIVD------PA----- 73
Query: 68 FHICSRNHCPLMPFRLLETK-----IKTPENVIIDKVEAEVEDNVSGEEPQNLGVS---- 127
+ I S ++P+ PE+ ++ + E+++N +P +S
Sbjct: 74 YRIISGGATRILPYFFSNAASAPALAAPPEDQ--NQHQGELQNNPQDNDPSVTPISNKPE 133
Query: 128 -TLVGLPGSSGEANRSENNSDFNGCQKDKENNALGGNGKI-DVEKWIQGKTFSRDEVSRL 187
+ + G SG AN +E N + ++ K AL + I ++E+ ++GKTFS+ E+ RL
Sbjct: 134 PASIEVGGPSGTANVNEGNFSISAQRRGKA--ALNDDVAISELERLMEGKTFSQAEIDRL 193
Query: 188 LEVLRSRALE-PSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEELERATGGNLT 247
+E++ SRA++ P K ++ E + S ++ E P GK E T
Sbjct: 194 IEMISSRAIDLPDVKRDERNLEIPLREGAKKNMSLFDKAKE-PIGGKDANSEIWA----T 253
Query: 248 PHPHSLVSRYNVLNIKETGSSIGMKLR-EVGASPVDIASAYMSNQKSEPGLASDKMPDDE 307
P P +++ +L+ G K+R EVG SP ++A AYM Q S + + +E
Sbjct: 254 PTP---LAKSIILD--------GDKIRDEVGLSPAELAKAYMGGQTSSSS-SQGFVARNE 313
Query: 308 KALRHGDHQMFKPFIPSMSPNPSTCWPGAMSESQRGYVTPRSQRGRFGLHNFPRTPYSRS 367
K + K + S S PS CWPG S Q G+ TP+S+R +GL NFPRTPYSR+
Sbjct: 314 KDCLDRSMLVGKSSLASPSSKPSACWPGIKSSEQSGFATPQSRRESYGLQNFPRTPYSRT 373
Query: 368 IFSMSKSKSKLTQLQGDGQKFV-NTPSPLWQRSRSPAYSMMTSSKDPLDEATGSIGLTCS 427
I +S SKSKL QLQ D K + N SP +S Y ++ +D GL
Sbjct: 374 I--LSNSKSKLMQLQNDSSKHLSNLQSP--SQSVERRYGQLSKGRDG--------GLFGP 433
Query: 428 LQHKASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPDMKKNLDRGGASTIPLSQSVGI- 487
+ + T S S Y P + EN+ + K+ + G +S + SQ
Sbjct: 434 SRRTRQSATPSMVSPY-SRPSRGASRFENSA-------IMKSSEAGESSYLSRSQITTYG 493
Query: 488 --NNSESSLPTVRPQSSQVARTILEHI--TRNPPTPKEKTEELKRAIEWK--------KT 547
+E TV SSQ+ARTIL+H+ T++ TPK KT ELK A W+ +
Sbjct: 494 KHKEAEVGTLTVPTHSSQIARTILDHLERTQSQSTPKNKTAELKLATSWRHPQSSKTVEK 553
Query: 548 PSANVPSVKPNETSSLAVDIDSHQKANQVDQNCHPQLSDEGKTMS----TVLPKEGAGRN 607
S++V +VK + ++ L DI + NQ P + G + T G R
Sbjct: 554 SSSDVTNVKKDGSAKLHEDIQNIFSQNQPSSVLKPPATTTGDIQNGMNKTASATNGIFRG 613
Query: 608 PDAANQNPYGLKFRFSNAESKHKDDAGLNIGSSSPKAVPKIFPALGSEVWTQIK-PSPSL 667
AA+ L++ F + +G+SS A + + G E K PS SL
Sbjct: 614 TQAASSGGNALQYEFGKPKGSLSRSMHDELGTSSQDAAKAVPYSFGGETANLPKPPSHSL 673
Query: 668 G-GKPIFPSITISKPESKWAFSSDSGSAFTFPVSGASSGMLSEPPRPSIFPST-----SL 707
G KP+ PSI+++KP KWA S S + FTFPVS + SEP PSI P T +
Sbjct: 674 GNNKPVLPSISVAKPFQKWAVPSGSNAGFTFPVSSSDGTTSSEPTTPSIMPFTTSPPVAS 699
BLAST of Carg09922 vs. TAIR 10
Match:
AT3G10650.1 (BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). )
HSP 1 Score: 87.4 bits (215), Expect = 5.2e-17
Identity = 194/785 (24.71%), Postives = 284/785 (36.18%), Query Frame = 0
Query: 1 MERAEGGTSSTPYGGG-GIGGKVRKPNTRKPLPSPYARPVHNQSHR----------RWLS 60
M A G SS PYGGG G GGK RKP R+ +PY RP + + WLS
Sbjct: 1 MASAARGESSNPYGGGLGTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLS 60
Query: 61 KLVDLPTGSLPAEPPDCFHICSRNHCPL--MPFRLLETKIKTPENVIIDKVEAEVEDNVS 120
KLVD + F SR P + E + + PE + + + +++VS
Sbjct: 61 KLVDPAQRLITYSAQRLFGSLSRKRLGSGETPLQSPEQQKQLPERGVNQETKVGHKEDVS 120
Query: 121 GEEPQNLGVSTLVGLPGSSGEANRSENNSDFNGCQKDKENNAL---GGNGKIDVEKWIQG 180
N S NG + ++ NA +G D+EK +QG
Sbjct: 121 --------------------------NLSMKNGLIRMEDTNASVDPPKDGFTDLEKILQG 180
Query: 181 KTFSRDEVSRLLEVLRSRALEPSNKVEDNTFSPQSIEKQVEQPSTANRVLEMPREGKQEE 240
KTF+R EV RL +LRS+A + S E+ + V P + R P G
Sbjct: 181 KTFTRSEVDRLTTLLRSKAADSSTMNEEQR---NEVGMVVRHPPSHERDRTHPDNGSMNT 240
Query: 241 LERATGGNLTPHPHSLVSRYNVLNIKETGSSIGMKLREVGASPVDIASAYMSNQKSEP-- 300
L G+L L E ASP +A AYM ++ SE
Sbjct: 241 LVSTPPGSL------------------------RTLDECIASPAQLAKAYMGSRPSEVTP 300
Query: 301 ---GLASDKMPDDEKALRHGDHQMFKPFIPSMSPNPS-TCWPGAMSESQRGYVTPRSQRG 360
GL +D L PF P SP S P + G+VTPRS RG
Sbjct: 301 SMLGLRGQAGREDSVFLNR------TPF-PQKSPTMSLVTKPSGQRPLENGFVTPRS-RG 360
Query: 361 RFGLHNFPRTPYSR--------SIFSMSKSKSKLTQLQGDGQKFVNTPSPLWQRSRSPAY 420
R +++ RTPYSR S+F S SK + + G Q F S L +RS
Sbjct: 361 RSAVYSMARTPYSRPQSSVKIGSLFQASPSKWEESLPSGSRQGF---QSGLKRRS----- 420
Query: 421 SMMTSSKDPLDEATGSIGLTCSLQHKASAVTNSRRSAYFYPPQQPEMEIENNISEAIFPD 480
LD GS+G ++ K++ + S P + + + N
Sbjct: 421 -------SVLDNDIGSVGPVRRIRQKSNLSSRS----LALPVSESPLSVRAN-------- 480
Query: 481 MKKNLDRGGASTIPLSQSVGINNSESSLPTVRPQSSQVARTILEH----ITRNPPTPKEK 540
GG T S+ + SS V +SS++A IL+ ++ +P +
Sbjct: 481 -------GGEKTTHTSKDSAEDIPGSSFNLVPTKSSEMASKILQQLDKLVSTREKSPSKL 540
Query: 541 TEELKRAIEWKKTPSANVPSVKPNETSSLAVDIDSHQKANQVDQN--CHPQLSDEGKTMS 600
+ + R K + P N A DS + ++ + L+ KT
Sbjct: 541 SPSMLRGPALKSLQNVEAPKFLGNLPEKKANSPDSSYQKQEISRESVSREVLAQSEKTGD 600
Query: 601 TV--LPKEGAGRNPDAANQN-------------PYGLKFRFSNAESKHKDDAGLNIGSSS 660
V K G+ ++ D + P FR S E + D L S+
Sbjct: 601 AVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPKKRSFRMSAHEDFLELDDDLGAASTP 660
Query: 661 PKAVPK--IFPALGSEVWTQIKPSPSLGGKPIFPSITI-----------SKPESKWAFSS 719
+ K F S + S +G KP+ PS + S+ S + +
Sbjct: 661 CEVAEKQNAFEVEKSHI------SMPIGEKPLTPSEAMPSTSYISNGDASQGTSNGSLET 673
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7023514.1 | 0.0e+00 | 100.00 | Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022960828.1 | 0.0e+00 | 89.09 | nuclear pore complex protein NUP1-like isoform X1 [Cucurbita moschata] | [more] |
XP_023515697.1 | 0.0e+00 | 87.82 | nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo] >... | [more] |
XP_022987623.1 | 0.0e+00 | 87.54 | nuclear pore complex protein NUP1-like isoform X1 [Cucurbita maxima] | [more] |
KAG6589842.1 | 0.0e+00 | 90.24 | Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Q9CAF4 | 7.3e-16 | 24.71 | Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HA42 | 0.0e+00 | 89.09 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1JJZ8 | 0.0e+00 | 87.54 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1HA80 | 0.0e+00 | 89.34 | nuclear pore complex protein NUP1-like isoform X3 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1HC90 | 0.0e+00 | 90.22 | uncharacterized protein LOC111461519 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1JJE0 | 2.4e-304 | 85.94 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT5G20200.1 | 1.6e-58 | 30.49 | nucleoporin-related | [more] |
AT3G10650.1 | 5.2e-17 | 24.71 | BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.... | [more] |