Carg09921 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09921
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Carg_Chr10: 2535244 .. 2536445 (-)
RNA-Seq Expression	Carg09921
Synteny	Carg09921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCTGGTGGACCGGTAGGCGGTTTTCTTAGTGTCATGTAGCAACGTCTCTTCCCCAATTGTCTTATAAAAATCTCCCGCTGCCGCCATTGTTGTAGGTCAGACCTCAAGGAACTACACACGGCGTCCATACTTCCAGAACAATGCTTCTAAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTGGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTGGTTGGAGGTGGAGTTGGTGGTAGTGGTGGAAGTATCCATGGTGGCGGCGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTAAATATATGATCGAAGAACAAATGCTGTTCGATTTCAAACATTCGTACTATTTTTGTTGTATTTATGATTACTTGGTTCGGGTATTAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGGTAAGCTTTTGGATTTGATGATGAGATTCTTACTGTGGTTGTTTAATGGCATATTCATTGATTGCTTTTATGGTAGCAGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAG

mRNA sequence

AACCTGGTGGACCGGTAGGCGGTTTTCTTAGTGTCATGTAGCAACGTCTCTTCCCCAATTGTCTTATAAAAATCTCCCGCTGCCGCCATTGTTGTAGGTCAGACCTCAAGGAACTACACACGGCGTCCATACTTCCAGAACAATGCTTCTAAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTGGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTGGTTGGAGGTGGAGTTGGTGGTAGTGGTGGAAGTATCCATGGTGGCGGCGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAG

Coding sequence (CDS)

ATGCTTCTAAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTGGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTGGTTGGAGGTGGAGTTGGTGGTAGTGGTGGAAGTATCCATGGTGGCGGCGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAG

Protein sequence

MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRALSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFVNVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS

Homology

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BLAST of Carg09921 vs. NCBI nr
Match: KAG7023515.1 (hypothetical protein SDJN02_14541 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569.7 bits (1467), Expect = 1.5e-158
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDCYVLASYARFLWDAEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 296

[Close]

BLAST of Carg09921 vs. NCBI nr
Match: KAG6589844.1 (hypothetical protein SDJN03_15267, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 562.0 bits (1447), Expect = 3.1e-156
Identity = 294/301 (97.67%), Postives = 296/301 (98.34%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSS+ETEIVHH+PKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSLETEIVHHVPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDA-----EEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAA 297
           KAAPEDCYVLASYARFLWDA     EEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAA
Sbjct: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAA 300

[Close]

BLAST of Carg09921 vs. NCBI nr
Match: XP_022960832.1 (uncharacterized protein LOC111461520 isoform X2 [Cucurbita moschata])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGF PSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVG SGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDAEEEEEE-EEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDCYVLASYARFLWDAEEEEEE EE+EEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 297

[Close]

BLAST of Carg09921 vs. NCBI nr
Match: XP_023515706.1 (uncharacterized protein LOC111779789 isoform X6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.1 bits (1437), Expect = 4.4e-155
Identity = 292/296 (98.65%), Postives = 292/296 (98.65%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSV RTKPFSRTLSGFSELAEETDAVGF PSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVPRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVGGSGG IH GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGGSGGRIH-GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDCYVLASYARFLWDAEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 295

[Close]

BLAST of Carg09921 vs. NCBI nr
Match: XP_022960831.1 (uncharacterized protein LOC111461520 isoform X1 [Cucurbita moschata])

HSP 1 Score: 554.7 bits (1428), Expect = 4.9e-154
Identity = 293/298 (98.32%), Postives = 294/298 (98.66%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGF PSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVG SGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDC-YVLASYARFLWDAEEEEEE-EEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDC YVLASYARFLWDAEEEEEE EE+EEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 298

[Close]

BLAST of Carg09921 vs. ExPASy TrEMBL
Match: A0A6J1H8I4 (uncharacterized protein LOC111461520 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461520 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.6e-156
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGF PSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVG SGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDAEEEEEE-EEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDCYVLASYARFLWDAEEEEEE EE+EEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 297

[Close]

BLAST of Carg09921 vs. ExPASy TrEMBL
Match: A0A6J1H8P6 (uncharacterized protein LOC111461520 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461520 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.4e-154
Identity = 293/298 (98.32%), Postives = 294/298 (98.66%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGF PSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVG SGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDC-YVLASYARFLWDAEEEEEE-EEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDC YVLASYARFLWDAEEEEEE EE+EEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 298

[Close]

BLAST of Carg09921 vs. ExPASy TrEMBL
Match: A0A6J1JJW1 (uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.5e-150
Identity = 287/298 (96.31%), Postives = 288/298 (96.64%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVET IVHHIPKS SIV SGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETGIVHHIPKSSSIVLSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAV F PSE+TSLSCGSISETGD DGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVRFNPSEITSLSCGSISETGDADGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVGGSGG IH GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGGSGGCIH-GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDA--EEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDCYVLASYARFLWDA  EEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297

[Close]

BLAST of Carg09921 vs. ExPASy TrEMBL
Match: A0A6J1JKH9 (uncharacterized protein LOC111485244 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.7e-149
Identity = 287/299 (95.99%), Postives = 288/299 (96.32%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVET IVHHIPKS SIV SGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETGIVHHIPKSSSIVLSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAV F PSE+TSLSCGSISETGD DGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVRFNPSEITSLSCGSISETGDADGRFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVGGSGG IH GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGGSGGCIH-GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDC-YVLASYARFLWDA--EEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297
           KAAPEDC YVLASYARFLWDA  EEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCSYVLASYARFLWDAEEEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 298

[Close]

BLAST of Carg09921 vs. ExPASy TrEMBL
Match: A0A5A7U9I5 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001190 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.3e-131
Identity = 256/301 (85.05%), Postives = 273/301 (90.70%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           M+LRSASTPLLNSWLHHSRDSS+E EIV+ IPKSRSI+ SGSPSCLSPIIDD PRRITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVYQIPKSRSILLSGSPSCLSPIIDDYPRRITRT 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISETGDGDGRFV 120
           LSETDL+DLS+++ KPFSRTLSGFSE+AEET  VGF  S+  SLSCGSISETG+ DG FV
Sbjct: 61  LSETDLQDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 NVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           +VLVGGGVGGSGG IH GGGGSDGGDD SFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 SVLVGGGVGGSGGRIH-GGGGSDGGDDWSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESY NQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEE-----EESLREEPATRFFQGVHPPPPIAAA 297
           KAAPEDCYVLASYARFLWDA+EEEEEEEEE     EE+ RE+PAT FFQGV  PPP+AAA
Sbjct: 241 KAAPEDCYVLASYARFLWDADEEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAAA 299

[Close]

BLAST of Carg09921 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 242.7 bits (618), Expect = 3.8e-64
Identity = 169/309 (54.69%), Postives = 203/309 (65.70%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHS--RDSSVET-EIVHHIPKSRSIVFSGSPS--CLSPI----ID 60
           MLLRSASTPLLNS +H S  RDS +ET E VH I + RSI  S S S  C SP+     D
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  DSPRRITRALSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISE 120
           DS RR+ R  S++DLR L+ S   P S+ LSG + + +  + +GFG    +S     IS 
Sbjct: 61  DSSRRMKRTASDSDLRHLT-STKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYD--GISW 120

Query: 121 TGDGDGRFVNVLVGGGVGGSGGSIHGGGGGSDGG-DDGSFGFGDSNHGNESTDLYYQKMI 180
             D D       V G  GG GG  HGGG G  GG  DG  G      G+++TD++Y+KMI
Sbjct: 121 ALDEDTE-----VAG--GGGGGMFHGGGKGRSGGRSDGGDG------GDDNTDVHYRKMI 180

Query: 181 EANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSP 240
           EANPGN + LSNYA+FLKEVR D +KA+EYCGRAIL +P DGNVL+MYA+L+W+  KDS 
Sbjct: 181 EANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSS 240

Query: 241 RAESYHNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEE--EESLREEPA-TRFFQGVH 297
           RAE+Y NQAV AAPEDCYV ASYARFLWDAEEEEEEE+EE  EE L  + +   FF G  
Sbjct: 241 RAENYFNQAVAAAPEDCYVQASYARFLWDAEEEEEEEKEERHEEELEHQTSRMNFFTG-- 290

[Close]

BLAST of Carg09921 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-44
Identity = 137/316 (43.35%), Postives = 180/316 (56.96%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWL--HHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRIT 60
           MLLRS S P+LNSWL  H SR+SS E E      +S S+    S S    I   +  ++ 
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEPE-SQLWRRSTSLSLFSSKS----IDGHTGEQLH 60

Query: 61  RALSETDLRDLSVSRTKPFS-RTLSGFSELAEETDAVGFGPSEMTSLSCGSI----SETG 120
           +ALS+     +  S++   S +T +   +     D   +    +   S   +    S +G
Sbjct: 61  QALSDNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVERLFSSSG 120

Query: 121 DGDGRFVN----VLV---GGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYY 180
            GD    N     LV   GGG+GGSGG+I  GGGG  G         D     ++TD YY
Sbjct: 121 QGDKASSNDRLETLVSGGGGGMGGSGGNICNGGGGVGGSG------VDGGRSEDATDTYY 180

Query: 181 QKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQ 240
           ++MI++NPGNS+L  NYA+FLKEV+GD+ KA+EYC RAIL N  DGNVLS+YADLI    
Sbjct: 181 REMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHNH 240

Query: 241 KDSPRAESYHNQAVKAAPEDCYVLASYARFLWDAEEEEEEEE--EEEESLREE----PAT 297
           +D  RA SY+ QAVK +PEDCYV ASYARFLWD +E+EE+E   EEEE+L +E    P T
Sbjct: 241 QDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEENLSDETGHVPPT 300

[Close]

BLAST of Carg09921 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-35
Identity = 85/146 (58.22%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 126 GGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYAR 185
           GG GG GG   GGGGG  GG               S D YY++MI+  PG+++LLSNYAR
Sbjct: 89  GGFGGRGGDGAGGGGGGGGG---------------SVDGYYEEMIQRYPGDTLLLSNYAR 148

Query: 186 FLKEVRGDLVKAQEYCGRAILSNPG-DGNVLSMYADLIWETQKDSPRAESYHNQAVKAAP 245
           FLKEV+GD  KA+EYC RA+LS  G DG +LSMY DLIW+   D  RA+SY++QAV+++P
Sbjct: 149 FLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSP 208

Query: 246 EDCYVLASYARFLWDAEEEEEEEEEE 271
           +DC VLASYARFLWDAEEE EEEE +
Sbjct: 209 DDCNVLASYARFLWDAEEEVEEEESK 219

[Close]

BLAST of Carg09921 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-32
Identity = 107/280 (38.21%), Postives = 144/280 (51.43%), Query Frame = 0


Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVH----HIPKSRSIVFSGSPSCLSPIIDDSPRR 60
           +L+R+ S P+L + L     S   T I          S    F+G    +    +   RR
Sbjct: 4   LLMRTGSMPVLQNRLISGGSSRKMTPISRTNSVESLSSYGERFAGGKISIEVKANVGMRR 63

Query: 61  ITRALSETDL----RDLSVSRTKPFSRTLSGFSELAEETDAVGFGPSEMTSLSCGSISET 120
           +   LSE+D+    R L    +KP    +    E  EE   + F     + +S G   E 
Sbjct: 64  V---LSESDVIRSERMLKRVGSKPSPARIPEDDEAGEE--EIRFADGWGSMISGGLPVEE 123

Query: 121 GDGDGRFVNVLVGGGVGGSGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEA 180
                       GGGVGG  G   G G G  GG +     GD          YY++M+ +
Sbjct: 124 --------KCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGD----------YYREMLRS 183

Query: 181 NPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRA 240
           NP NS+LL NY +FL EV  D   A+EY GRAIL NPGDG  LSMY  LIWET++D  RA
Sbjct: 184 NPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRA 243

Query: 241 ESYHNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEEEE 273
           + Y +QAV A+P DC VL SYARF+W+AE++++++EEEEE
Sbjct: 244 QGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEE 260

[Close]

BLAST of Carg09921 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 5.4e-18
Identity = 48/122 (39.34%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 151 GFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPG 210
           G+ D N G+     YY+ M+E  P + +LL NYA+FL E +GDL  A+EY  +  +  P 
Sbjct: 115 GYDDKNCGD-----YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPS 174

Query: 211 DGNVLSMYADLIWETQKDSPRAESYHNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEE 270
           DG  L+ Y  L+ +  +D  +A SY  +AV+A+P+D  VLA+YA FLW+   ++++E+++
Sbjct: 175 DGVALANYGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDD 230

Query: 271 EE 273
           E+
Sbjct: 235 ED 230

The following BLAST results are available for this feature:

BLAST of Carg09921 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023515.1	1.5e-158	100.00	hypothetical protein SDJN02_14541 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589844.1	3.1e-156	97.67	hypothetical protein SDJN03_15267, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960832.1	2.0e-155	98.65	uncharacterized protein LOC111461520 isoform X2 [Cucurbita moschata]	[more]
XP_023515706.1	4.4e-155	98.65	uncharacterized protein LOC111779789 isoform X6 [Cucurbita pepo subsp. pepo]	[more]
XP_022960831.1	4.9e-154	98.32	uncharacterized protein LOC111461520 isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg09921 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg09921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8I4	9.6e-156	98.65	uncharacterized protein LOC111461520 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H8P6	2.4e-154	98.32	uncharacterized protein LOC111461520 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JJW1	3.5e-150	96.31	uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JKH9	8.7e-149	95.99	uncharacterized protein LOC111485244 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7U9I5	6.3e-131	85.05	Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ...	[more]

BLAST of Carg09921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20190.1	3.8e-64	54.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	1.5e-44	43.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	2.2e-35	58.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	3.0e-32	38.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	5.4e-18	39.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..277
None	No IPR available	PFAM	PF13431	TPR_17	coord: 166..199 e-value: 1.2E-4 score: 22.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..274
None	No IPR available	PANTHER	PTHR26312:SF73	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..288
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..288
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 155..279 e-value: 7.0E-12 score: 47.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 165..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09921-RA	Carg09921-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding