Carg09817 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg09817
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
LocationCarg_Chr14: 2755833 .. 2756354 (-)
RNA-Seq ExpressionCarg09817
SyntenyCarg09817
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTCCCCAAAATCACCGCCAAATCCTTCTCCCCCGGCCGTCTTTTCCCATCCAAAAAGCACCGCACCAGCCTCTCCAAATCCGAGCCCCCTTCCTTCGGCTCCGCCTCATCCTCCTCCCCAACCAGCGTCTTACCGCCTCACCCGCACCCCCACCTCTCGGGAGAATGGTCCGACTTCTCCGACACCCACACCGACTACCGCAAGGAACTGGAAGCTCTACTAGGCCTCATCGGCGCCGAACCGCCGAGCGAAGAGGAGCTCAAGATGATGATGAGCCAAGTAGACAAAGTCGGCCCGCCTTGCCACTCCGAACTGCGAGATACGTTTGAAATCTTCGACGCCGACCACGACGGAAGAATCACGGCGGAGGAGCTTTTTAGTGTGTTCTCCGCCATGGGAGATGAGCAGTGCACGTTGGAGGATTGCCGGCGTATGATTGCCGGAGTGGACAAAAACGGGGATGGGTTCGTGTGCTTCGAGGACTTCGCGGTTATGATGGAGTGCCAGAGATGTTGA

mRNA sequence

ATGAAGCTCCCCAAAATCACCGCCAAATCCTTCTCCCCCGGCCGTCTTTTCCCATCCAAAAAGCACCGCACCAGCCTCTCCAAATCCGAGCCCCCTTCCTTCGGCTCCGCCTCATCCTCCTCCCCAACCAGCGTCTTACCGCCTCACCCGCACCCCCACCTCTCGGGAGAATGGTCCGACTTCTCCGACACCCACACCGACTACCGCAAGGAACTGGAAGCTCTACTAGGCCTCATCGGCGCCGAACCGCCGAGCGAAGAGGAGCTCAAGATGATGATGAGCCAAGTAGACAAAGTCGGCCCGCCTTGCCACTCCGAACTGCGAGATACGTTTGAAATCTTCGACGCCGACCACGACGGAAGAATCACGGCGGAGGAGCTTTTTAGTGTGTTCTCCGCCATGGGAGATGAGCAGTGCACGTTGGAGGATTGCCGGCGTATGATTGCCGGAGTGGACAAAAACGGGGATGGGTTCGTGTGCTTCGAGGACTTCGCGGTTATGATGGAGTGCCAGAGATGTTGA

Coding sequence (CDS)

ATGAAGCTCCCCAAAATCACCGCCAAATCCTTCTCCCCCGGCCGTCTTTTCCCATCCAAAAAGCACCGCACCAGCCTCTCCAAATCCGAGCCCCCTTCCTTCGGCTCCGCCTCATCCTCCTCCCCAACCAGCGTCTTACCGCCTCACCCGCACCCCCACCTCTCGGGAGAATGGTCCGACTTCTCCGACACCCACACCGACTACCGCAAGGAACTGGAAGCTCTACTAGGCCTCATCGGCGCCGAACCGCCGAGCGAAGAGGAGCTCAAGATGATGATGAGCCAAGTAGACAAAGTCGGCCCGCCTTGCCACTCCGAACTGCGAGATACGTTTGAAATCTTCGACGCCGACCACGACGGAAGAATCACGGCGGAGGAGCTTTTTAGTGTGTTCTCCGCCATGGGAGATGAGCAGTGCACGTTGGAGGATTGCCGGCGTATGATTGCCGGAGTGGACAAAAACGGGGATGGGTTCGTGTGCTTCGAGGACTTCGCGGTTATGATGGAGTGCCAGAGATGTTGA

Protein sequence

MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSDFSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC
Homology
BLAST of Carg09817 vs. NCBI nr
Match: KAG6580931.1 (putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017674.1 putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.8 bits (909), Expect = 4.3e-94
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60
           MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD
Sbjct: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60

Query: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 120
           FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG
Sbjct: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 120

Query: 121 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 174
           RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC
Sbjct: 121 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 173

BLAST of Carg09817 vs. NCBI nr
Match: XP_022935658.1 (probable calcium-binding protein CML36 [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 7.4e-94
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60
           MKLPK+TAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD
Sbjct: 13  MKLPKLTAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 120
           FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG
Sbjct: 73  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 132

Query: 121 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 174
           RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC
Sbjct: 133 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 185

BLAST of Carg09817 vs. NCBI nr
Match: XP_022983878.1 (probable calcium-binding protein CML36 [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 9.1e-92
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60
           MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSAS SSPTSVLPPHPHPHLSGEWSD
Sbjct: 13  MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASFSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 120
           FSDTH DYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGP CHSELRDTFEIFDADHDG
Sbjct: 73  FSDTHIDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPACHSELRDTFEIFDADHDG 132

Query: 121 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 174
           RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC
Sbjct: 133 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 185

BLAST of Carg09817 vs. NCBI nr
Match: XP_023527899.1 (probable calcium-binding protein CML36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.5 bits (859), Expect = 2.7e-88
Identity = 165/173 (95.38%), Postives = 168/173 (97.11%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60
           MKLPK+TAKSF     FPSKKHR+SLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD
Sbjct: 13  MKLPKLTAKSF-----FPSKKHRSSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 120
           FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG
Sbjct: 73  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 132

Query: 121 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 174
           +ITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC
Sbjct: 133 KITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 180

BLAST of Carg09817 vs. NCBI nr
Match: XP_038903370.1 (probable calcium-binding protein CML36 [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 4.7e-64
Identity = 134/168 (79.76%), Postives = 143/168 (85.12%), Query Frame = 0

Query: 9   KSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSS----PTSVLPPHPHPHLSGEWSDFSDT 68
           KSF+P RLF SK HR+ LS+S+PPSFGSASSSS    PTSVLP       S  WSDFSD+
Sbjct: 5   KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLP-------SAVWSDFSDS 64

Query: 69  HTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDGRITA 128
            T  RKELEALLGLIGAEPPSEEELK MM  +D+VGP CHSELRDTFEIFDADHDGRITA
Sbjct: 65  -TLSRKELEALLGLIGAEPPSEEELKTMMGAMDRVGPACHSELRDTFEIFDADHDGRITA 124

Query: 129 EELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 173
           EELFSVF+AMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFA MM+CQR
Sbjct: 125 EELFSVFTAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 164

BLAST of Carg09817 vs. ExPASy Swiss-Prot
Match: Q9SS31 (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29
Identity = 88/214 (41.12%), Postives = 118/214 (55.14%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPP-SFGSASSSS-----------------P 60
           MKL K+      P R F   K R+++SKS    SFGSASSSS                 P
Sbjct: 1   MKLAKLI-----PKRFFIRSKDRSTVSKSPTAFSFGSASSSSGQDCKNSGGDGGGGSVTP 60

Query: 61  TSVLPPHPHPHLSGE------WSDFSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQV 120
           TS+LP  P P+   E        D  +     R +LE+LL  +G +P +EEE+ +M+ +V
Sbjct: 61  TSILPEVPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEV 120

Query: 121 DKVGPPC------------------HSELRDTFEIFDADHDGRITAEELFSVFSAMGDEQ 173
           D  G                      +EL++TFE FDAD DG I+A+EL  VFS +GDE+
Sbjct: 121 DCDGDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDER 180

BLAST of Carg09817 vs. ExPASy Swiss-Prot
Match: P30188 (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26
Identity = 82/198 (41.41%), Postives = 106/198 (53.54%), Query Frame = 0

Query: 12  SPGRLFPSKKHRTSLSKSEPPSFGSASSSS----------------PTSVLPPHPHPHLS 71
           SP RLF +K  + S+S+SEP SF S +SSS                P SVLP +     +
Sbjct: 11  SPKRLFRTKS-KASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISVLPQNSGDFYT 70

Query: 72  G-----EWSDFSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHS----- 131
                 +  D  D     R +L AL+  +  EPPS+EE+ +M+ +VD     C S     
Sbjct: 71  ELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCISLEDLA 130

Query: 132 ---------------ELRDTFEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAG 169
                          ELR+ FEIFD D +G+I+AEEL  VF  +GDE+CTLE+C RMIA 
Sbjct: 131 SRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEECMRMIAT 190

BLAST of Carg09817 vs. ExPASy Swiss-Prot
Match: Q9FYK2 (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.3e-15
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 0

Query: 70  KELEALLGLIGAEPPSEEELKMMMSQVDKVGP-------------------PCHSELRDT 129
           KEL A++  +G E P EEEL+  ++++D+ G                         L+D 
Sbjct: 56  KELGAIMTSLGHEVP-EEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDA 115

Query: 130 FEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMM 169
           F ++D D +G I+AEEL  V  ++GDE C++ +CR+MI GVDK+GDG + FE+F +MM
Sbjct: 116 FSVYDIDGNGSISAEELHEVLRSLGDE-CSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171

BLAST of Carg09817 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 0

Query: 63  DTHTDYRKELEALLGLIGAEPP--SEEELKMMMSQVDKVG-------------------- 122
           D + D +  ++ L  +IGA  P  S+EE K MM + D  G                    
Sbjct: 24  DKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSS 83

Query: 123 -PPCHSELRDTFEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFV 169
                 +L++ F+++D D +GRI+A EL SV   +G E+C+++DC+RMI  VD +GDG V
Sbjct: 84  NNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSDGDGCV 143

BLAST of Carg09817 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.4e-12
Identity = 58/172 (33.72%), Postives = 80/172 (46.51%), Query Frame = 0

Query: 18  PSKKHRTSLSKSEP-PSFGSASSSSPTSVLPPHPHPHLSGEWSDFSDTHTDYRKELEALL 77
           P+   R S SKS P P    AS     +  P      +  ++    D     R EL AL 
Sbjct: 7   PALFRRRSGSKSPPLPQADPASGGGSPAPTPEEEMERVFRKFDANGDGRIS-RSELGALF 66

Query: 78  GLIGAEPPSEEELKMMMSQVDKVG--------------------PPCHSELRDTFEIFDA 137
             +G    +++EL  MM++ D  G                         +LR  F +FDA
Sbjct: 67  ESLG-HAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDA 126

Query: 138 DHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMM 169
           D +G I+A EL  V   +G E+ T++ CRRMI GVD+NGDG + FE+F VMM
Sbjct: 127 DGNGTISAAELARVLHGLG-EKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175

BLAST of Carg09817 vs. ExPASy TrEMBL
Match: A0A6J1FB49 (probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC111442449 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.6e-94
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60
           MKLPK+TAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD
Sbjct: 13  MKLPKLTAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 120
           FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG
Sbjct: 73  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 132

Query: 121 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 174
           RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC
Sbjct: 133 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 185

BLAST of Carg09817 vs. ExPASy TrEMBL
Match: A0A6J1J8Y7 (probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC111482360 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.4e-92
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60
           MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSAS SSPTSVLPPHPHPHLSGEWSD
Sbjct: 13  MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASFSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 120
           FSDTH DYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGP CHSELRDTFEIFDADHDG
Sbjct: 73  FSDTHIDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPACHSELRDTFEIFDADHDG 132

Query: 121 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 174
           RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC
Sbjct: 133 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQRC 185

BLAST of Carg09817 vs. ExPASy TrEMBL
Match: A0A5A7UEZ0 (Putative calcium-binding protein CML35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007460 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.7e-62
Identity = 129/172 (75.00%), Postives = 144/172 (83.72%), Query Frame = 0

Query: 9   KSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSS--------PTSVLPPHPHPHLSGEWSD 68
           KSF+P RLF SK HR+ LS+S+PPSFGSASSSS        PTSVLP       S +W+D
Sbjct: 5   KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLP-------SLDWAD 64

Query: 69  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 128
           FSD  T  RKEL+ALLGLIGAEPPSEEE+K+MM ++D+VGP CHSELRDTFEIFDADHDG
Sbjct: 65  FSDP-TLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPACHSELRDTFEIFDADHDG 124

Query: 129 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 173
           RITAEELFSVF+AMGDE CTLEDCRRMIAGVDKNGDGFVCF+DFA MM+CQR
Sbjct: 125 RITAEELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARMMDCQR 168

BLAST of Carg09817 vs. ExPASy TrEMBL
Match: A0A1S3B7R8 (probable calcium-binding protein CML35 OS=Cucumis melo OX=3656 GN=LOC103486950 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.7e-62
Identity = 129/172 (75.00%), Postives = 144/172 (83.72%), Query Frame = 0

Query: 9   KSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSS--------PTSVLPPHPHPHLSGEWSD 68
           KSF+P RLF SK HR+ LS+S+PPSFGSASSSS        PTSVLP       S +W+D
Sbjct: 5   KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLP-------SLDWAD 64

Query: 69  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDG 128
           FSD  T  RKEL+ALLGLIGAEPPSEEE+K+MM ++D+VGP CHSELRDTFEIFDADHDG
Sbjct: 65  FSDP-TLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPACHSELRDTFEIFDADHDG 124

Query: 129 RITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 173
           RITAEELFSVF+AMGDE CTLEDCRRMIAGVDKNGDGFVCF+DFA MM+CQR
Sbjct: 125 RITAEELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARMMDCQR 168

BLAST of Carg09817 vs. ExPASy TrEMBL
Match: A0A0A0LFY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823060 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 126/171 (73.68%), Postives = 142/171 (83.04%), Query Frame = 0

Query: 9   KSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSS-------PTSVLPPHPHPHLSGEWSDF 68
           KS +P RLF SK HR+ LS+S+PPSFGSASSSS       PTSVLP       S +WSDF
Sbjct: 5   KSLNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSSAAGTPTSVLP-------SLDWSDF 64

Query: 69  SDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDGR 128
           SD  T  RKEL+ALLGLIGAEPPSEEE+K+MM ++D+VGP CHSELRDTFEIFDADHDGR
Sbjct: 65  SDP-TLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPTCHSELRDTFEIFDADHDGR 124

Query: 129 ITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 173
           ITAEELFSVF+AMGD+ CTLEDC+RMIAGVDKNGDGFVCF+DF  MM+CQR
Sbjct: 125 ITAEELFSVFAAMGDDGCTLEDCQRMIAGVDKNGDGFVCFDDFVRMMDCQR 167

BLAST of Carg09817 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.6e-30
Identity = 88/214 (41.12%), Postives = 118/214 (55.14%), Query Frame = 0

Query: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPP-SFGSASSSS-----------------P 60
           MKL K+      P R F   K R+++SKS    SFGSASSSS                 P
Sbjct: 1   MKLAKLI-----PKRFFIRSKDRSTVSKSPTAFSFGSASSSSGQDCKNSGGDGGGGSVTP 60

Query: 61  TSVLPPHPHPHLSGE------WSDFSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQV 120
           TS+LP  P P+   E        D  +     R +LE+LL  +G +P +EEE+ +M+ +V
Sbjct: 61  TSILPEVPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEV 120

Query: 121 DKVGPPC------------------HSELRDTFEIFDADHDGRITAEELFSVFSAMGDEQ 173
           D  G                      +EL++TFE FDAD DG I+A+EL  VFS +GDE+
Sbjct: 121 DCDGDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDER 180

BLAST of Carg09817 vs. TAIR 10
Match: AT2G41410.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 82/198 (41.41%), Postives = 106/198 (53.54%), Query Frame = 0

Query: 12  SPGRLFPSKKHRTSLSKSEPPSFGSASSSS----------------PTSVLPPHPHPHLS 71
           SP RLF +K  + S+S+SEP SF S +SSS                P SVLP +     +
Sbjct: 11  SPKRLFRTKS-KASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISVLPQNSGDFYT 70

Query: 72  G-----EWSDFSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHS----- 131
                 +  D  D     R +L AL+  +  EPPS+EE+ +M+ +VD     C S     
Sbjct: 71  ELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCISLEDLA 130

Query: 132 ---------------ELRDTFEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAG 169
                          ELR+ FEIFD D +G+I+AEEL  VF  +GDE+CTLE+C RMIA 
Sbjct: 131 SRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEECMRMIAT 190

BLAST of Carg09817 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 81.6 bits (200), Expect = 6.6e-16
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 0

Query: 70  KELEALLGLIGAEPPSEEELKMMMSQVDKVGP-------------------PCHSELRDT 129
           KEL A++  +G E P EEEL+  ++++D+ G                         L+D 
Sbjct: 56  KELGAIMTSLGHEVP-EEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDA 115

Query: 130 FEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMM 169
           F ++D D +G I+AEEL  V  ++GDE C++ +CR+MI GVDK+GDG + FE+F +MM
Sbjct: 116 FSVYDIDGNGSISAEELHEVLRSLGDE-CSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171

BLAST of Carg09817 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 0

Query: 63  DTHTDYRKELEALLGLIGAEPP--SEEELKMMMSQVDKVG-------------------- 122
           D + D +  ++ L  +IGA  P  S+EE K MM + D  G                    
Sbjct: 24  DKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSS 83

Query: 123 -PPCHSELRDTFEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFV 169
                 +L++ F+++D D +GRI+A EL SV   +G E+C+++DC+RMI  VD +GDG V
Sbjct: 84  NNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSDGDGCV 143

BLAST of Carg09817 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12
Identity = 31/64 (48.44%), Postives = 50/64 (78.12%), Query Frame = 0

Query: 105 SELRDTFEIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDF 164
           S+L++ FE++D D +GRI+A+EL SV   +G E+C+++DC++MI+ VD +GDG V F++F
Sbjct: 93  SDLKEAFELYDLDGNGRISAKELHSVMKNLG-EKCSVQDCKKMISKVDIDGDGCVNFDEF 152

Query: 165 AVMM 169
             MM
Sbjct: 153 KKMM 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6580931.14.3e-94100.00putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. s... [more]
XP_022935658.17.4e-9499.42probable calcium-binding protein CML36 [Cucurbita moschata][more]
XP_022983878.19.1e-9298.27probable calcium-binding protein CML36 [Cucurbita maxima][more]
XP_023527899.12.7e-8895.38probable calcium-binding protein CML36 [Cucurbita pepo subsp. pepo][more]
XP_038903370.14.7e-6479.76probable calcium-binding protein CML36 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9SS315.1e-2941.12Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 ... [more]
P301881.8e-2641.41Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 ... [more]
Q9FYK29.3e-1538.14Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 ... [more]
Q9C8Y11.5e-1235.66Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ... [more]
Q8RZB57.4e-1233.72Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Match NameE-valueIdentityDescription
A0A6J1FB493.6e-9499.42probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1J8Y74.4e-9298.27probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC1114823... [more]
A0A5A7UEZ04.7e-6275.00Putative calcium-binding protein CML35 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3B7R84.7e-6275.00probable calcium-binding protein CML35 OS=Cucumis melo OX=3656 GN=LOC103486950 P... [more]
A0A0A0LFY71.5e-6073.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823060 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G10190.13.6e-3041.12Calcium-binding EF-hand family protein [more]
AT2G41410.11.3e-2741.41Calcium-binding EF-hand family protein [more]
AT1G24620.16.6e-1638.14EF hand calcium-binding protein family [more]
AT1G66400.11.1e-1335.66calmodulin like 23 [more]
AT5G37770.14.4e-1248.44EF hand calcium-binding protein family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 143..171
e-value: 0.0017
score: 27.6
coord: 106..134
e-value: 3.1E-5
score: 33.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 106..168
e-value: 4.4E-9
score: 36.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 139..173
score: 9.603815
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 102..137
score: 12.923368
IPR002048EF-hand domainCDDcd00051EFhcoord: 106..168
e-value: 1.11764E-18
score: 73.3509
NoneNo IPR availableGENE3D1.10.238.10coord: 102..173
e-value: 3.1E-20
score: 74.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 68..171
NoneNo IPR availablePANTHERPTHR10891:SF869SUBFAMILY NOT NAMEDcoord: 68..171
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 115..127
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 152..164
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 70..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09817-RACarg09817-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding