Carg09756 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09756
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin receptor RAD23
Location	Carg_Chr14: 3053149 .. 3060860 (-)
RNA-Seq Expression	Carg09756
Synteny	Carg09756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACGTGCCTGACCCTGGCTTGGTGACTGGAGTGTAAAGTCCATTTACCCACCTTCTTCCTGCAATTGAACCTTTGATTCTCTATATTGGCAATCTAGGGTTTTCTCTTCTTCTGAATTTCTCTTTTTCCTCCCCTAAATCCTTCCCATTCGCTCACTTTCCTTCTCCTTCTCTCCTTCTACTTTGTCGGGATGAAGCTTACGGTTAAGACCCTGAAAGGGAGTCACTTTCAAATTGAGGTTCAGCCTACAGACACCGTGAGTTTTTCTTTTTCTTCTCGCCATTTGATTTCTCGCGCTATGTTTGGTTGAACTGAAAATTTATGGGTTTCAGGTAAAGAGTATTGAATTTCTGTTAGTGTATATATGGAGTTTGGTGGATAATGTAAATGGGGCAAAAGGGTCTCTGACGTTTTATTTTCCTTGGCGATTCTTTTAATTGAAATTTTGAAGTTTTATTTAGGGTTCATCATTCCACCTATTTGAATCAGTGGTATTTCAGATTTTTTGTATATCGGTTCCCTTTCAGATTGTTGTTTTTATGTTTATTTTGTCTATTTATTCGTTAATTGCATTCCTAGATAGGATTTTTTTGATTGAGATGCCTTCTGAAACCCATTTTGAATTTCGAAGTTCAATTTCTTCCGAGTATGTCACAATGTTTCATTTGAAATTATAATTCAGCTTTTAGTTTTCATGTCATGCTCTATTTGCTTTTTTCCGTGGCTTGGAGCAACTAAATTGTTTATTTTTCTTCCTACTTTATATAATCATTATATTTAATAGTACGTGATTTACATTTGTATGGTTTTTATTCAGATTGAGGTTTGTGTCTTATCTCTTTGTGAGAAAAAGTGTTGATATCGACTTTGAGCCTTTTAGAACAGTGATGGTGTCATGAAGGATTAAATAAATCATTTAGAGAGAAATAAACTAAATGAGCGTCTCTTGTTTCTTCTTTTTATTTTATTTTTCATGTAAGTGATCTATTTACCTATTCTACATCTGATATAAGTAGGCGATGGACTGCAATCTTGGGAAGACAATTGTTGGGATTCTTCCTGCTGTGTCTTTTTTCAATTTGTGTGCCCCCACCCCTCACATATCTTCTCTCCACTTCGGAGGTTTTTGTTTGGGACTCTTTTATTTGGAACTTGTCCTTTACATGGCATTTGAGACATGAGGAAAATAAGGACTGGGCATGTATGAAAACTATCTTAGGAAATTATCACCTAACAAACAGGAAAACTGCTATTTGGTTGGATTTTTAGTAAATTTTTTGTTCTGTTTCTTTGCACTGTCCTTCTAATTCGCATTTAGATTAAGTTGATTTCAAGATTGAAGGTTCCTGCCGATATTCAGGGTTTTGTTTGGATGGTGGCTTTTAGAATGATTAATACTAATGATAAAACTCAAAAGAGGTACTATCTCATGTCACCTAATCTTCTTGTAACTAGCGTGTGCTTGTTTCTGGTATGCCCTTGTACATTCTTTCATTTTTCTCAATGGAAGCTCAGTTTCTTCCTTAAAAAAAGGTCTTCTACCCTTCTGAAGTACATTTCCATTAAAGGAAAGAGGATGACATTCAACAATTGTTTGTTCACAATCACCGTGGCTGGAACTCGTAAGATATATTGTGGAACATTTTTGAGCTACGTGGGGTTGCTCCCATCTTGGTTCACTTTTCATTTAACTTATTCCCCCTCCTCAAAGGGCTTGTCTAAATTCTCTTGTGGGATGCAGTTTTTGCTACTTTTATGAAATAGCAGAAGTCAGTGATAGAATTATACTTCCTGTGGGAGATTAAGGTCATGAGATTTGGGACTGATTGTGTATAATGCGTCTCTAAGGGCTTCCCTTCCCCTCCCATTAGTTTTGTCTGCTTAGTGCTTAGAATTGTGCTAGTGATCACATCTACGACATTATTTTATGCCTGTTTTTATGACTTCAACTCCTAGTGTCCCAGCCCTTTATTAGCTTTATTTATTGAACTAATATTTTTGTACCATTAATTGTACCTACAACATTATTTTATGTCATATTATGTTCTTAGGAGAAGTATATTGTCTATTGAATAGATGAACATATGTTGGTGATTTGTGAATCGAGCTGGTGATTTTAGTTAAAATATCTCTAGCATAGGAAGTATTTTTATTTTTATTGAATATTCTACATTTTTTCCACCTAACTAGGTTTTGGGTGTAAAGAAGAACATTGAAGATGCACAAGGAACAGATAGTTATCCTTGTGGTCAGCAATTGTTAATCCACAATGGGAAGGTTCTAAAAGATGAAACAACGCTGTCAGAGAACAAGGTTACTGAAGATGGATTTCTGGTTGTCATGCTTAGTAAGGTATGTTGTGTTGTAGCCAACTTAGACATCCTTTCCGAAACAATTAAGCTTCCTTTCTGATTATTATCTTGCTTCATATCAAATGACTATGGTGGACTGCTACATGATAATCTTCTTTTCTATCATGAGAATTAGTGATTAAACTCTTCGTAGTTTGCTATTAGTATACGTCTTGTTGCTATAGTTGTCTAATGATTGTTGATGTCCAACATCTTTTAACATGCAAATTTATATTAATTTCAATTCAACACCAAAGGGTATGACCTCCTACTTTTTCTCTGTACAAACCCCTCCCCTTTGTACACTTGGCTGCCAACCACCTAGCTCACTGGAGCTCCAACCGTCCCTCCCACCATGGTTGGGCGGCCTTTCCCACACTCTGTCACTTTTTCCATGGGAAAAAAAGCTCTCCGTTGATAAAGCATAGGGTTTGTGCATTATATAGACCTCAAGCAATCGGTCACTCATGTTCACCTTGAAGAAAACCTCTCCGCCCTTTGCTGACAACAAGCTTCTCAGCTTTACTGGATACCTTGAATACATGCTTTGGTATGAAAAGATATCAAACAGAGAAGGCCACTTTGTTAAGATTGCCAAGCTTGGAGTAAACGATTGTTTAAATAAGCTCATCATACCTGTGGATGAAAACAAGATTGTTGGAAAAACTTCCTTTCTCTTCTTAAAGGTCTCAACCACCAGAAAACTCCATCTTTATTTCCCGAGTCCACTTTTAAGGAAGTATTGAAGGCTTTCATTCCCCAAAAATCCGTTACTCATTACTCTCCAAGACAGCTCCACAGCAAAACCACCCCCCACCCCCCCCCCCCCCCCAACCTCATTGGAACTTGCTGCCTTCTACCTTGACAAAGGCATATTATCGATCCTAAAACACCTCCATGATGATTAGTATGAAATCCTAAGAGCAATGCAACTGAAACTCACATGCTTTGGGTCCATTAAGTCCTCTACAACCCAACAAAGCAATTTTAGCTGTTGATAACAAGGAACAAGGCTGAATTTTAGCGCTGGTGCATTTATGGTGAAATTTGAACAATGGAGTCGGGAGAATATAGTCCATCCCAATTGAAATATTGTCTTGTAAAGCCTTCAGACAAATCAGAGACCTTTGTGATGAGTGTGTTGAAACAACAAAGAACACTCACAAGAATGGACATGATGGAGGTATGCTTGTAGATTAAGGAAGACCCCATGGTTTTATTCCAACCATTCTAAATCTCGCATCATCCACTGCCTCAGTGACTGTCCAAATAGATTTTTTGTTTTGTTTTGTTTTCTTTTTGTTTTTAATGTTGACCCTTTCATTGAAGAAATTGTTGGAATCCATGAAAAAATCCCACTGACCTCACCAGAGATTTCATCTATCCACCCCATTTCCATTAAAACCCTTCTGGCCATTGGATCCACACGAGTCCTTTTATTCTTGCCCCTTCGTAGACCCAAACCTTTCCATGCACTAGTCCCCATCCCAGCTTCATCAGATCCATACCTAGAGCTGCACAACCTTTATTAATCCCCTGTACCTTCGTCTGGCACTTTTCCTTATCATATTTGACCTTCCCCCCTTGACTTCGTTTTCTCTTCCTCCTGTAAAAGAATTCTTTATGGTTGGGATTGAACCAAACCAAGTTGACCCAACCCAGCCAATTTCCCCGCCCCACCCACAGCATCACATTTTTGGCCAAAAATGTGATGACCATTAATAATAAAATAACCCACATTCTCACTGACACCATTCGCCGTTCTACGCTTGGTCATCTCTCTATAGACTCAAAGTTGATGCCTCTGCTTTATTTCACCTCAACGATTTGCTCCATTCTCTTCCACTTCCTAACCCTGCTTCCCTCTCAATTGCCTCTCTTTTCGATTTGTCTTCCTGCTCCAGTGAGCCCATTCGTCTTCTTCCTACCCCAACACAGAACATGGCCCTCATCATTGAGCTTCTTGGAAGTTCTGTCCTAGAAAAAGTTTACCGGAGGTTGACATTGAAGCTTAGGTTTGCCTTTCACATGCTCTTGAAACAACCAATCTTACTGCTTCGCTTGATAGTTGGTGCTGGAATTTAGAGAAAATTGGAGTTTTTCTACTAAATCTCTCTCTATCTCTTTACCTGTGAGGCGTAAAACGATCCAACCTCTACACATCCATATGGAAAGGCATATACCCCAAGAAGGTAAGTTTTTTTTTTTTTTATCTTGGAATTAATTCACACCTGTCTAGACACTCATGACAAGCTGCAGTGGCGTTCTCCTTGGTTCTCTATTTCTTCTCATTGCTGAATTATGTGCAGAAGTGACAGGGAAACACAGAATCACTCATTCTTTTGTAACCAGTGTCTGGTATTCCAAAGCTGTAGTTCTTCGGGAACTGAAGCCTAGATTTTCTTGTGGGAAATAGTGTGTACCTTTATTTTTCTGTTTGATGTTCACTACCTATTTGGTTTCAGATAATATCTTTATTTGTCCTATAAAAGGAGGAGCGGCAGTTCTATCAAATTTACAACTTTACATTCTCAAACTCCCAAGTATGTCATTTAAAGGTTTTAAATGTAGTTAAATGAAATCCATCAGAGCTATCATAAGTAATGAATGTCACAGGAGATTATATTGTTATTCTCTCCATTATCCACCTAAATAGTGGTTGCATTTATCCATGGATCTTTGAAGAGATTTGGTTAAACTTCAGACCTAGTAATAAATCCTTGTCATCCCTTTTCCTGAGATTCCTGAATTCATATGTTTTTCAATTGTTCCCCTCACTGATTTCCTTTATACAGAGTAAAGCACCTGGTTCAACTGGGTCATCGTCTACTCAGGTTTAATGTATTTCTTTATTATTTTTATTTGGGGGTTATGTAATTAGTTCATGTTTGCCTCTGAACTGGTGTCTATCTGTGTACTTGACAGACGACTACCAATGTACCTACAACTACTCCAACACCAAATTCTACTTTGATTCCTGAAGCTCCCGCACAACCAGCGTGAGTCTATTGATTATGCCAACTCAACTTATTGTCTCTCTTACCCCTTAGCAGCTTATCAGCTTGATAATTATAGATGTTTCTCTGTGATTGCTTTTTCAGAGCCTCGAGGAATGTTGCTACTTCAGATGTGCCAACTGCAAAGTATGATCTTGGTTTTTGCTTATTATTTATATCATTATATATCTTTAATTTGCTGTTGCCAAGTTTTTGCGTTGACTTTTGAAGTTCCTTAATGTGATTAGGACAACTGTTCAAACTTAAATAGCATGAAGTATCGAATATTTTGTTATGCTGCAGTACTCAAGTTGATACATATGGACAAGCTGCTTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACTATTCAAGAAATAATGGATATGGGTGGTGGTAACTGGGATAGAGAAACAGTTACTCGTGCGCTTCGAGCAGCCTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGTATGTTTTTACCAATTTGCCAATAGTATTTTCAGTTGTTTTTCTTATTCTTTTTTTTTTTTTAAATGTTACTGAACTTGGCTTTATATTCAGGGTATTCCAGAAGCTGCAGAAATTGCAGCCCCTGTGGCCCGTCCTCCGTCTAGCCAGCCTATAGAAACAGGTGGTGTGACTGCTCCTCCTACTTCTGGAGGTCCCAATTCATCTCCCTTGAATATGTTCCCACAGGTAAAAGTTTGTACTTGGTCGAAATTTTGTCCTTTTTATTCCTTTTAAATTCTCACTGAGAGCTAGTATTTTAGGAGTCCCTTGCTGCTGCCGCTGCTGGTGGTGGAGGTAGCCTTGGATCCCTTGAGTTCCTTCGAAACAACCCACAGGTATGCTTTAATTTTTCTCGCTTTTCTTGTTTATGTAGGACTATTGTTTGGAAATGCCTACGGCCTTCTGATAACTTTCTTACTGGTCATTATGAAGAATAGTTTAGGTCAGAACATATCATTAATCTTTGCTGCCAAGCTACTGAGCTTTGGCTTTTCCTTTGAAGTGTCTTGTTAATTGAAAAGATGCTCGGTCAGACTCGAGCACAGCCTTCCAAACAATTGAATGGCAAAGTTTTAAAAAATATATTTAAATATTTACTCTGATATGATCTGTTTAGGCATCTTTTCTTGTATTAATGCTGATAAATTTGATATGTATTGTTACCATCCACACTATTATAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTACAGGTCTGTGCTATTCTTTTTCCTTTCTCGTTGATTTCAAATTTATGCATCCTTTTGGCTATATTTAAAACTGTTAACTCGGCTTCTGTTTCAGGCAATGCTTCAGGAACTTGGGAAGCAGAATCCTCAGCTTTTGAGATTAATCCAGGATCATCAAGCAGAGTTTCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTCGAAGGGCAAGTTTTTTCGTCCATTTGTGGCCAATGATCTTTTTATTTGTCAATTGAAATATAGAAGACATCCAAATTTTCATTTTCTTCCAGGGATCTGTTTGATCAGCCTGAGCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATTGAACGAGTAAGTTATCTGCCCTTGTATAATACTTCCAAGTATCGAGCAACAATCGGTCTGCTTACCATCTCCTCTCACTTACACGCATTTCAGCTCGAAGCATTGGGGTTCGATAGGGATCAAGTCATTGAGGCATTTTTAGCTTGTGACCGAAACGAGGAATTGGCTGCCAACTATCTCTTGGAACATGGTGGCGAATTTGAGGATTAAATGGTGAACTTCATCACATTCGATGAATAGTTTTTTTTTTCTTCTTCTCGTTGTTTAGACAAATCCATGATATTTGTTAGCTTCTAAGTTTCAAACTTTCTTGCCGAACTGCCAATAATTTGTTTTTCTTTTGAACTTTAATAGTTAATTGGCACATATGAATTCATCAAATATAGAACGTCGAGAGAGTAACGATTAGACTATAAGCTCAAAGCTAGTTTGCTTGTGTTAACGTTTCAGGTAACGTCGAGCGTGGCATAATTAGACATTTGAAAAGGTGGGGTTTCTTGATTTCTATTGCTTATTCTTTGAACAGAATTGAAGTTATACTGTTCAATCAATGAGGGCAAAAAATGCAGAAATCCCTATGGCAGTGAAGAGTGTGTCTTTTGGGCGAAACAACGCAACAGAGTTCTCTATGATGAAACCAGTTTCGCTTGTTTATCTGTTTGGATGTGTTTGATAACTTGGTTTAAAGCTTAGATTTATATCACCAAATTTCCCCCTTTTTGTCTTTCAAATTTCAAGTTTTGGAATTTAAA

mRNA sequence

TCACGTGCCTGACCCTGGCTTGGTGACTGGAGTGTAAAGTCCATTTACCCACCTTCTTCCTGCAATTGAACCTTTGATTCTCTATATTGGCAATCTAGGGTTTTCTCTTCTTCTGAATTTCTCTTTTTCCTCCCCTAAATCCTTCCCATTCGCTCACTTTCCTTCTCCTTCTCTCCTTCTACTTTGTCGGGATGAAGCTTACGGTTAAGACCCTGAAAGGGAGTCACTTTCAAATTGAGGTTCAGCCTACAGACACCGTTTTGGGTGTAAAGAAGAACATTGAAGATGCACAAGGAACAGATAGTTATCCTTGTGGTCAGCAATTGTTAATCCACAATGGGAAGGTTCTAAAAGATGAAACAACGCTGTCAGAGAACAAGGTTACTGAAGATGGATTTCTGGTTGTCATGCTTAGTAAGAGTAAAGCACCTGGTTCAACTGGGTCATCGTCTACTCAGACGACTACCAATGTACCTACAACTACTCCAACACCAAATTCTACTTTGATTCCTGAAGCTCCCGCACAACCAGCAGCCTCGAGGAATGTTGCTACTTCAGATGTGCCAACTGCAAATACTCAAGTTGATACATATGGACAAGCTGCTTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACTATTCAAGAAATAATGGATATGGGTGGTGGTAACTGGGATAGAGAAACAGTTACTCGTGCGCTTCGAGCAGCCTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGGTATTCCAGAAGCTGCAGAAATTGCAGCCCCTGTGGCCCGTCCTCCGTCTAGCCAGCCTATAGAAACAGGTGGTGTGACTGCTCCTCCTACTTCTGGAGGTCCCAATTCATCTCCCTTGAATATGTTCCCACAGGAGTCCCTTGCTGCTGCCGCTGCTGGTGGTGGAGGTAGCCTTGGATCCCTTGAGTTCCTTCGAAACAACCCACAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTACAGGCAATGCTTCAGGAACTTGGGAAGCAGAATCCTCAGCTTTTGAGATTAATCCAGGATCATCAAGCAGAGTTTCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTCGAAGGGGATCTGTTTGATCAGCCTGAGCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATTGAACGACTCGAAGCATTGGGGTTCGATAGGGATCAAGTCATTGAGGCATTTTTAGCTTGTGACCGAAACGAGGAATTGGCTGCCAACTATCTCTTGGAACATGGTGGCGAATTTGAGGATTAAATGGTGAACTTCATCACATTCGATGAATAGTTTTTTTTTTCTTCTTCTCGTTGTTTAGACAAATCCATGATATTTGTTAGCTTCTAAGTTTCAAACTTTCTTGCCGAACTGCCAATAATTTGTTTTTCTTTTGAACTTTAATAGTTAATTGGTAACGTCGAGCGTGGCATAATTAGACATTTGAAAAGAAATCCCTATGGCAGTGAAGAGTGTGTCTTTTGGGCGAAACAACGCAACAGAGTTCTCTATGATGAAACCAGTTTCGCTTGTTTATCTGTTTGGATGTGTTTGATAACTTGGTTTAAAGCTTAGATTTATATCACCAAATTTCCCCCTTTTTGTCTTTCAAATTTCAAGTTTTGGAATTTAAA

Coding sequence (CDS)

ATGAAGCTTACGGTTAAGACCCTGAAAGGGAGTCACTTTCAAATTGAGGTTCAGCCTACAGACACCGTTTTGGGTGTAAAGAAGAACATTGAAGATGCACAAGGAACAGATAGTTATCCTTGTGGTCAGCAATTGTTAATCCACAATGGGAAGGTTCTAAAAGATGAAACAACGCTGTCAGAGAACAAGGTTACTGAAGATGGATTTCTGGTTGTCATGCTTAGTAAGAGTAAAGCACCTGGTTCAACTGGGTCATCGTCTACTCAGACGACTACCAATGTACCTACAACTACTCCAACACCAAATTCTACTTTGATTCCTGAAGCTCCCGCACAACCAGCAGCCTCGAGGAATGTTGCTACTTCAGATGTGCCAACTGCAAATACTCAAGTTGATACATATGGACAAGCTGCTTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACTATTCAAGAAATAATGGATATGGGTGGTGGTAACTGGGATAGAGAAACAGTTACTCGTGCGCTTCGAGCAGCCTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGGTATTCCAGAAGCTGCAGAAATTGCAGCCCCTGTGGCCCGTCCTCCGTCTAGCCAGCCTATAGAAACAGGTGGTGTGACTGCTCCTCCTACTTCTGGAGGTCCCAATTCATCTCCCTTGAATATGTTCCCACAGGAGTCCCTTGCTGCTGCCGCTGCTGGTGGTGGAGGTAGCCTTGGATCCCTTGAGTTCCTTCGAAACAACCCACAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTACAGGCAATGCTTCAGGAACTTGGGAAGCAGAATCCTCAGCTTTTGAGATTAATCCAGGATCATCAAGCAGAGTTTCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTCGAAGGGGATCTGTTTGATCAGCCTGAGCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATTGAACGACTCGAAGCATTGGGGTTCGATAGGGATCAAGTCATTGAGGCATTTTTAGCTTGTGACCGAAACGAGGAATTGGCTGCCAACTATCTCTTGGAACATGGTGGCGAATTTGAGGATTAA

Protein sequence

MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLSENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVATSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED

Homology

[Close]

BLAST of Carg09756 vs. NCBI nr
Match: KAG7017735.1 (Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 721.1 bits (1860), Expect = 5.0e-204
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
           TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240
           AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Carg09756 vs. NCBI nr
Match: XP_023527347.1 (ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527348.1 ubiquitin receptor RAD23b-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023527350.1 ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 716.5 bits (1848), Expect = 1.2e-202
Identity = 372/374 (99.47%), Postives = 372/374 (99.47%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVP TTPTPNST IPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPITTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
           TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240
           AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Carg09756 vs. NCBI nr
Match: XP_022983812.1 (ubiquitin receptor RAD23b-like isoform X1 [Cucurbita maxima] >XP_022983813.1 ubiquitin receptor RAD23b-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 714.5 bits (1843), Expect = 4.7e-202
Identity = 370/374 (98.93%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKD+TTLS
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDDTTLS 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTEDGFLVVMLSKSKAPGS+GSSSTQTTTNVPTT PTPNSTLIPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSSGSSSTQTTTNVPTTIPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
           TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240
           AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDR+QVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDREQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Carg09756 vs. NCBI nr
Match: KAG6580993.1 (Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 710.7 bits (1833), Expect = 6.7e-201
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
           TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240
           AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHG 370
           AANYLLEHG
Sbjct: 361 AANYLLEHG 369

[Close]

BLAST of Carg09756 vs. NCBI nr
Match: XP_022934930.1 (ubiquitin receptor RAD23b-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 709.1 bits (1829), Expect = 2.0e-200
Identity = 373/376 (99.20%), Postives = 373/376 (99.20%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
           TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESL--AAA 240
           AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTA PTSGGPNSSPLNMFPQESL  AAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTA-PTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300
           AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL
Sbjct: 241 AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300

Query: 301 QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE 360
           QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE
Sbjct: 301 QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE 360

Query: 361 ELAANYLLEHGGEFED 375
           ELAANYLLEHGGEFED
Sbjct: 361 ELAANYLLEHGGEFED 375

[Close]

BLAST of Carg09756 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 491.5 bits (1264), Expect = 8.4e-138
Identity = 266/379 (70.18%), Postives = 311/379 (82.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIED+QG D+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTE+GFLVVMLSKSK+ GS G +S QT++     + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 TSDVPTAN---TQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNN 180
            S +P       Q DTYGQAAS LVSG++LEQ +Q+IM+MGGG+WD+ETVTRALRAAYNN
Sbjct: 121 ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNN 180

Query: 181 PERAVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAA 240
           PERAVDYLYSGIP+ AE+A PV   P +Q   +G     P SGGPNSSPL++FPQE++AA
Sbjct: 181 PERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAA 240

Query: 241 AAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           A   G G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEF
Sbjct: 241 A---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEF 300

Query: 301 LQLINEPLEGF--EGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACD 360
           LQL+NEP EG   EGD+FDQPEQ+MPHAINVTPAEQ+AI+RLEA+GFDR  VIEAFLACD
Sbjct: 301 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 360

Query: 361 RNEELAANYLLEHGGEFED 375
           RNEELAANYLLE+ G+FED
Sbjct: 361 RNEELAANYLLENSGDFED 371

[Close]

BLAST of Carg09756 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 473.8 bits (1218), Expect = 1.8e-132
Identity = 262/382 (68.59%), Postives = 307/382 (80.37%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHF+I V PTDT++ VKKNIED+Q  D+YPCGQQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQP-----AA 120
           ENKVTE+GFLVVMLSKSK   S G SSTQ T+   TTT T +ST +  AP+        A
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTS---TTTSTISSTTL-AAPSTTQSIAVPA 120

Query: 121 SRNVATSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAY 180
           S +    + PTA  Q DTYGQAAS LVSG+++EQ +Q+IM+MGGG+WD+ETVTRALRAAY
Sbjct: 121 SNSTPVQEQPTA--QSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAY 180

Query: 181 NNPERAVDYLYSGIPEAAEIAAPVARPPSSQPIETG-GVTAPPTSGGPNSSPLNMFPQES 240
           NNPERAVDYLYSGIPE   I A      +   + +G  +TAPP SGGPNSSPL++FPQE+
Sbjct: 181 NNPERAVDYLYSGIPETVTIPA-----TNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEA 240

Query: 241 LAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQ 300
           ++ AA   GG LG+LEFLR N QFQ LRSMV +NPQILQ MLQELGKQNPQLLRLIQ++Q
Sbjct: 241 VSDAA---GGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQ 300

Query: 301 AEFLQLINEPLEGFEG--DLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFL 360
           AEFLQL+NEP EG +G  D+FDQP+Q+MPH++NVTP EQ++IERLEA+GFDR  VIEAFL
Sbjct: 301 AEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFL 360

Query: 361 ACDRNEELAANYLLEHGGEFED 375
           +CDRNEELAANYLLEH  +FED
Sbjct: 361 SCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Carg09756 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 385.6 bits (989), Expect = 6.5e-106
Identity = 219/383 (57.18%), Postives = 278/383 (72.58%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MK+ VKTL GS+F+IEV+P D V  VK  IE  +G + YP  +Q+LIH GKVLKDETTL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVTEDGFLVVMLSKSKA--PGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRN 120
           EN V E+ F+V+MLSK+KA   G++ +S+   +   P T  TP  +    +   P +   
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAPTASVPVPTSGTA 120

Query: 121 VATSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNP 180
            A +    A+ Q D YGQAASNLV+G  LE T+Q+I+DMGGG+WDR+TV RALRAA+NNP
Sbjct: 121 TAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNP 180

Query: 181 ERAVDYLYSGIPEAAEIAAPVARPP-----SSQPIETGGVTAPP--TSGGPNSSPLNMFP 240
           ERAV+YLYSGIP  AEI  PVA+ P     ++ P+      A P   +GGPN++PLN+FP
Sbjct: 181 ERAVEYLYSGIPAQAEI-PPVAQAPATGEQAANPLAQPQQAAAPAAATGGPNANPLNLFP 240

Query: 241 QESLAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQ 300
           Q  + AA AG G   G+L+FLRN+ QFQALR+MVQANPQILQ MLQELGKQNPQL+RLIQ
Sbjct: 241 Q-GMPAADAGAGA--GNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQ 300

Query: 301 DHQAEFLQLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAF 360
           +HQA+FL+LINEP+EG E ++ +Q E  MP A+ VTP E++AIERLE +GFDR  V+E F
Sbjct: 301 EHQADFLRLINEPVEG-EENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVF 360

Query: 361 LACDRNEELAANYLLEHGGEFED 375
            AC++NEELAANYLL+H  EFED
Sbjct: 361 FACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Carg09756 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 384.8 bits (987), Expect = 1.1e-105
Identity = 228/424 (53.77%), Postives = 284/424 (66.98%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MK+ VKTLKG+HF+IEV+P D+V+ VKKNIE  QG D YP  +Q+LIH GKVLKDETT+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVTEDGFLVVMLSKSK---APGSTGSSSTQTTTNVPTTT-------PTPNSTLIPEAP 120
           ENKV E+ F+V+M++KSK   A  S+ S+ T    ++P +T        TP S   P AP
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 A-------------QPAASRNVATSDVP-----------------TANTQVDTYGQAASN 180
           A              P A+    T+ +P                    +Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEIAAPVA 240
           L +G+NLE TIQ+I+DMGGG WDRETV  ALRAA+NNPERAV+YLY+GIPE AE+  PVA
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEV-PPVA 240

Query: 241 RPPSS------QPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAAGGGGSLGSLEFLRN 300
           RPP+S       P +T    A P S GPN++PL++FPQ        GG    G+L+FLRN
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPAS-GPNANPLDLFPQ---GLPNVGGNPGAGTLDFLRN 300

Query: 301 NPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLE--GFEGDL 360
           + QFQALR+MVQANPQ+LQ MLQELGKQNP L+RLIQDHQA+FL+LINEP+E  G  G+L
Sbjct: 301 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 360

Query: 361 FDQPEQDM--PHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEELAANYLLEHGG 375
             Q    M  P AI VT  E++AIERLEA+GF+R  V+E F AC++NEELAANYLL+H  
Sbjct: 361 LGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMH 419

[Close]

BLAST of Carg09756 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 350.5 bits (898), Expect = 2.3e-95
Identity = 209/393 (53.18%), Postives = 265/393 (67.43%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MK++VKTLKGS FQIEV     V  VK+ IE  QG   YP  QQ+LIH GKVLKD+TTL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKV E+ FLV+ML + K   S+  ++++  +N    T T  +    +AP  PA +  V 
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVPVT 120

Query: 121 TS-DVPTA----------NTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTR 180
            S   PTA          +++ D YGQA SNLV+G+NLE TIQ I++MGGG WDR+ V  
Sbjct: 121 VSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLH 180

Query: 181 ALRAAYNNPERAVDYLYSGIPEAAEIAAPVARPPSSQ---PIETGGVTAPPT----SGGP 240
           AL AA+NNPERAV+YLYSG+PE  +I  P   PPS Q   P +    T P      S GP
Sbjct: 181 ALSAAFNNPERAVEYLYSGVPEQMDIPVP---PPSIQPANPTQASQATQPAAPSILSSGP 240

Query: 241 NSSPLNMFPQESLAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQ 300
           N+SPL++FPQ +L  A+    G LG+L+ LRNN QF+ L S+VQANPQILQ +LQELGKQ
Sbjct: 241 NASPLDLFPQ-ALPNASTDAAG-LGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQ 300

Query: 301 NPQLLRLIQDHQAEFLQLINEPLEG-FEGDLFDQPEQDMPHAINVTPAEQQAIERLEALG 360
           NPQ+L+LIQ++QAEFL LINEP EG  E +L DQ  + MP  I VTP E +AI RLEA+G
Sbjct: 301 NPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMG 360

Query: 361 FDRDQVIEAFLACDRNEELAANYLLEHGGEFED 375
           FDR  V++ F AC+++E+LAANYLL+H  EF+D
Sbjct: 361 FDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]

BLAST of Carg09756 vs. ExPASy TrEMBL
Match: A0A6J1J0D2 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 2.3e-202
Identity = 370/374 (98.93%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKD+TTLS
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDDTTLS 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTEDGFLVVMLSKSKAPGS+GSSSTQTTTNVPTT PTPNSTLIPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSSGSSSTQTTTNVPTTIPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
           TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240
           AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDR+QVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDREQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Carg09756 vs. ExPASy TrEMBL
Match: A0A6J1F959 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 9.5e-201
Identity = 373/376 (99.20%), Postives = 373/376 (99.20%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
           TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESL--AAA 240
           AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTA PTSGGPNSSPLNMFPQESL  AAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTA-PTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300
           AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL
Sbjct: 241 AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300

Query: 301 QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE 360
           QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE
Sbjct: 301 QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE 360

Query: 361 ELAANYLLEHGGEFED 375
           ELAANYLLEHGGEFED
Sbjct: 361 ELAANYLLEHGGEFED 375

[Close]

BLAST of Carg09756 vs. ExPASy TrEMBL
Match: A0A1S3B8V4 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.0e-195
Identity = 354/374 (94.65%), Postives = 363/374 (97.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPCGQQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNST IPEAP QPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240
           AVDYLYSGIPE AE+AAPVARPP+SQPIE GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTSQPIEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Carg09756 vs. ExPASy TrEMBL
Match: A0A0A0LCV4 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.5e-193
Identity = 351/374 (93.85%), Postives = 361/374 (96.52%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPC QQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPNST IPEAPAQPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240
           AVDYLYSGIPE AE+AAPVARPP+ QPI+ GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Carg09756 vs. ExPASy TrEMBL
Match: A0A6J1D9V5 (Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111018382 PE=3 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 2.4e-183
Identity = 339/377 (89.92%), Postives = 351/377 (93.10%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHFQIEVQP+DTVLGVKKNIED QG D+YPCGQQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPSDTVLGVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAP--AQPAASRN 120
           ENKV+ DGFLVVMLSKSK  GS GSSSTQTTTN PTTTPT NST  PEAP   QP ASR+
Sbjct: 61  ENKVSGDGFLVVMLSKSKTVGSAGSSSTQTTTNAPTTTPTSNSTSTPEAPTQTQPPASRD 120

Query: 121 VATSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNP 180
           VATSDVPT N Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNP
Sbjct: 121 VATSDVPTTNAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNP 180

Query: 181 ERAVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESL-AA 240
           ERAVDYLYSGIPE  E+AAPVARPP+SQP+ETGG TA P SG PNSSPLNMFPQESL A 
Sbjct: 181 ERAVDYLYSGIPETTEVAAPVARPPTSQPMETGGATATPVSGAPNSSPLNMFPQESLGAT 240

Query: 241 AAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           AA GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF
Sbjct: 241 AAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300

Query: 301 LQLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRN 360
           LQLINEPLEGFEGDLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRN
Sbjct: 301 LQLINEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRN 360

Query: 361 EELAANYLLEHGGEFED 375
           EELAANYLLEH GE+ED
Sbjct: 361 EELAANYLLEHAGEYED 377

[Close]

BLAST of Carg09756 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 491.5 bits (1264), Expect = 6.0e-139
Identity = 266/379 (70.18%), Postives = 311/379 (82.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIED+QG D+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTE+GFLVVMLSKSK+ GS G +S QT++     + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 TSDVPTAN---TQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNN 180
            S +P       Q DTYGQAAS LVSG++LEQ +Q+IM+MGGG+WD+ETVTRALRAAYNN
Sbjct: 121 ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNN 180

Query: 181 PERAVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAA 240
           PERAVDYLYSGIP+ AE+A PV   P +Q   +G     P SGGPNSSPL++FPQE++AA
Sbjct: 181 PERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAA 240

Query: 241 AAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           A   G G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEF
Sbjct: 241 A---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEF 300

Query: 301 LQLINEPLEGF--EGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACD 360
           LQL+NEP EG   EGD+FDQPEQ+MPHAINVTPAEQ+AI+RLEA+GFDR  VIEAFLACD
Sbjct: 301 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 360

Query: 361 RNEELAANYLLEHGGEFED 375
           RNEELAANYLLE+ G+FED
Sbjct: 361 RNEELAANYLLENSGDFED 371

[Close]

BLAST of Carg09756 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 490.3 bits (1261), Expect = 1.3e-138
Identity = 264/378 (69.84%), Postives = 307/378 (81.22%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIED+QG D+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQ--TTTNVPTTTPTPNSTLIPEAPAQPAASRN 120
           ENKVTE+GFLVVMLSKSK+ GS G +S Q  + T   T    P++T     PA P     
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQPVSATTSSTKPAAPSTTQSSPVPASP----- 120

Query: 121 VATSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNP 180
           +   + P A  Q DTYGQAAS LVSG++LEQ +Q+IM+MGGG+WD+ETVTRALRAAYNNP
Sbjct: 121 IPAQEQPAA--QTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNP 180

Query: 181 ERAVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAA 240
           ERAVDYLYSGIP+ AE+A PV   P +Q   +G     P SGGPNSSPL++FPQE++AAA
Sbjct: 181 ERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAA 240

Query: 241 AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300
              G G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEFL
Sbjct: 241 ---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFL 300

Query: 301 QLINEPLEGF--EGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDR 360
           QL+NEP EG   EGD+FDQPEQ+MPHAINVTPAEQ+AI+RLEA+GFDR  VIEAFLACDR
Sbjct: 301 QLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDR 360

Query: 361 NEELAANYLLEHGGEFED 375
           NEELAANYLLE+ G+FED
Sbjct: 361 NEELAANYLLENSGDFED 365

[Close]

BLAST of Carg09756 vs. TAIR 10
Match: AT1G79650.4 (Rad23 UV excision repair protein family )

HSP 1 Score: 482.3 bits (1240), Expect = 3.6e-136
Identity = 266/403 (66.00%), Postives = 312/403 (77.42%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIED+QG D+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTE+GFLVVMLSKSK+ GS G +S QT++     + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 TSDVP---------------------------TANTQVDTYGQAASNLVSGNNLEQTIQE 180
            S +P                            +  Q DTYGQAAS LVSG++LEQ +Q+
Sbjct: 121 ASPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQQ 180

Query: 181 IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEIAAPVARPPSSQPIETGGV 240
           IM+MGGG+WD+ETVTRALRAAYNNPERAVDYLYSGIP+ AE+A PV   P +Q   +G  
Sbjct: 181 IMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAA 240

Query: 241 TAPPTSGGPNSSPLNMFPQESLAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQ 300
              P SGGPNSSPL++FPQE++AAA   G G LG+LEFLRNN QFQ LR+MV +NPQILQ
Sbjct: 241 PVAPASGGPNSSPLDLFPQETVAAA---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQ 300

Query: 301 AMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGF--EGDLFDQPEQDMPHAINVTPAEQ 360
            MLQELGKQNPQLLRLIQ++QAEFLQL+NEP EG   EGD+FDQPEQ+MPHAINVTPAEQ
Sbjct: 301 PMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQ 360

Query: 361 QAIERLEALGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 375
           +AI+RLEA+GFDR  VIEAFLACDRNEELAANYLLE+ G+FED
Sbjct: 361 EAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395

[Close]

BLAST of Carg09756 vs. TAIR 10
Match: AT1G16190.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-133
Identity = 262/382 (68.59%), Postives = 307/382 (80.37%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHF+I V PTDT++ VKKNIED+Q  D+YPCGQQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQP-----AA 120
           ENKVTE+GFLVVMLSKSK   S G SSTQ T+   TTT T +ST +  AP+        A
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTS---TTTSTISSTTL-AAPSTTQSIAVPA 120

Query: 121 SRNVATSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAY 180
           S +    + PTA  Q DTYGQAAS LVSG+++EQ +Q+IM+MGGG+WD+ETVTRALRAAY
Sbjct: 121 SNSTPVQEQPTA--QSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAY 180

Query: 181 NNPERAVDYLYSGIPEAAEIAAPVARPPSSQPIETG-GVTAPPTSGGPNSSPLNMFPQES 240
           NNPERAVDYLYSGIPE   I A      +   + +G  +TAPP SGGPNSSPL++FPQE+
Sbjct: 181 NNPERAVDYLYSGIPETVTIPA-----TNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEA 240

Query: 241 LAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQ 300
           ++ AA   GG LG+LEFLR N QFQ LRSMV +NPQILQ MLQELGKQNPQLLRLIQ++Q
Sbjct: 241 VSDAA---GGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQ 300

Query: 301 AEFLQLINEPLEGFEG--DLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFL 360
           AEFLQL+NEP EG +G  D+FDQP+Q+MPH++NVTP EQ++IERLEA+GFDR  VIEAFL
Sbjct: 301 AEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFL 360

Query: 361 ACDRNEELAANYLLEHGGEFED 375
           +CDRNEELAANYLLEH  +FED
Sbjct: 361 SCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Carg09756 vs. TAIR 10
Match: AT1G79650.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 452.2 bits (1162), Expect = 4.0e-127
Identity = 251/379 (66.23%), Postives = 294/379 (77.57%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIED+QG D+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120
           ENKVTE+GFLVVMLSKSK+ GS G +S QT++     + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 TSDVPTAN---TQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNN 180
            S +P       Q DTYGQAAS LVSG++LEQ +Q+IM+MGGG+WD+ETVTRALRAAYNN
Sbjct: 121 ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNN 180

Query: 181 PERAVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAA 240
           PERAVDYLYSGIP+ AE+A PV   P +Q   +G     P SGGPNSSPL++FPQE++AA
Sbjct: 181 PERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAA 240

Query: 241 AAAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           A   G G LG+LEFLRNN                     QELGKQNPQLLRLIQ++QAEF
Sbjct: 241 A---GSGDLGTLEFLRNND--------------------QELGKQNPQLLRLIQENQAEF 300

Query: 301 LQLINEPLEGF--EGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACD 360
           LQL+NEP EG   EGD+FDQPEQ+MPHAINVTPAEQ+AI+RLEA+GFDR  VIEAFLACD
Sbjct: 301 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 351

Query: 361 RNEELAANYLLEHGGEFED 375
           RNEELAANYLLE+ G+FED
Sbjct: 361 RNEELAANYLLENSGDFED 351

The following BLAST results are available for this feature:

BLAST of Carg09756 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017735.1	5.0e-204	100.00	Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023527347.1	1.2e-202	99.47	ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02352...	[more]
XP_022983812.1	4.7e-202	98.93	ubiquitin receptor RAD23b-like isoform X1 [Cucurbita maxima] >XP_022983813.1 ubi...	[more]
KAG6580993.1	6.7e-201	100.00	Ubiquitin receptor RAD23b, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022934930.1	2.0e-200	99.20	ubiquitin receptor RAD23b-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg09756 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	8.4e-138	70.18	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	1.8e-132	68.59	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L30	6.5e-106	57.18	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	1.1e-105	53.77	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	2.3e-95	53.18	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Carg09756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J0D2	2.3e-202	98.93	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1	[more]
A0A6J1F959	9.5e-201	99.20	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1	[more]
A0A1S3B8V4	2.0e-195	94.65	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1	[more]
A0A0A0LCV4	2.5e-193	93.85	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1	[more]
A0A6J1D9V5	2.4e-183	89.92	Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111018382 PE=3 SV=...	[more]

BLAST of Carg09756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79650.1	6.0e-139	70.18	Rad23 UV excision repair protein family	[more]
AT1G79650.2	1.3e-138	69.84	Rad23 UV excision repair protein family	[more]
AT1G79650.4	3.6e-136	66.00	Rad23 UV excision repair protein family	[more]
AT1G16190.1	1.3e-133	68.59	Rad23 UV excision repair protein family	[more]
AT1G79650.3	4.0e-127	66.23	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 2.2E-26 score: 93.4
None	No IPR available	GENE3D	1.10.8.10		coord: 140..190 e-value: 5.6E-22 score: 79.3
None	No IPR available	GENE3D	1.10.8.10		coord: 321..368 e-value: 7.9E-24 score: 85.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..229
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..373
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..373
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 141..190 e-value: 2.97138E-30 score: 108.083
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 2.4617E-31 score: 111.495
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 324..340 score: 62.3 coord: 341..355 score: 58.18 coord: 275..297 score: 63.04 coord: 356..371 score: 61.93
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..373 e-value: 1.3E-124 score: 414.2
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 247..290 e-value: 1.3E-8 score: 44.6
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 9.7E-22 score: 88.2
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 4.2E-17 score: 61.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 18.845818
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 147..187 e-value: 1.7E-5 score: 34.3 coord: 330..367 e-value: 8.8E-8 score: 41.9
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 147..185 e-value: 8.7E-15 score: 54.3 coord: 330..365 e-value: 5.9E-12 score: 45.2
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 145..188 score: 12.787865
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 328..368 score: 15.583128
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 237..304 e-value: 1.4E-27 score: 97.1
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 246..311
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 249..304 e-value: 4.0E-23 score: 80.9
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 312..370
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 143..194
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09756-RA	Carg09756-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding