Carg09717 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg09717
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c oxidase subunit 5C
LocationCarg_Chr14: 3347780 .. 3350184 (-)
RNA-Seq ExpressionCarg09717
SyntenyCarg09717
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTACCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGTGACATTACTGTTGTTCTTCCAGAGGACAATTAATGTAATTTTCGTCTTTTTTTGTAAAAATTAATTAGCTTAAATTGTAAGTTTTGTTTTCGTTTAGTTTAATGTTTATTTAAATGGTTTAAATGGATTGAAGGCGTGTATTTATATTCATAACTTTTAAATATACTATAAAATATACTATAAATTAAATTATAAATTAAATAAGGGAAAAATATTATGATATAATATCTAAAATATATTTTGTAAATAATATATTCTTCGAATTCTTTTAAGTATACAAGTATTCATATGATTTACAAGTATAGTTTCTAAATCATCTACGACATTTTTCTGATGGAATATCGCTTCTCGAGGTTTAAATTTTACCTCATGAAAGAAGTAAATTCGACTTCGAGGAGGGAGTGATATTTGAACGGCTAGACTATGAACACAGTGACGAACTACAATCCAAGAAAAATAATGAGTGTTTGGGTTGAAAAAAAGAATGTAGATGATTTGATCACGATCGAGTGACATTAACTTCAACTTAAACCCGGGAATTTTTAGGGAGGTTTTAATCGTTGGCTCGAGATTTTTGGAATATTGGAGTTTGAAGAGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAGAAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAAAATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTGTGCATAGCAGCCCTATTTGCAGAACATCCATGGCTTCCTTTGCTGGGTAATCCTTGTTCAAGCATGAGTCAATGGCTTCACTTAATCTCCCTGATTTGTACAGATCCCAAACCTGTGGCATAAGAACAATGAGAATATTATCAACTTCCTCTCTCCTTATATGATTGGTAGTCATGAATCTTACTGTTTGGAGGAGTGGGGTAGAGTTCTCTGTGAAGGAACTGTTTCGTCTACCGCAGACGATCTCGAGTATCAGCACTCCAAAGCTATAAACGTCTGCCTTTTCGGTAAGCTGTCCTCGAACGAGATATTCAGGAGCCATATAACCTCTGTCTCAACGCACATTGTTCAATTAAGAGTTTGAATAAAGTCAGATACAGATTGTGATCAAGATAGTAAGTAGAACTCTCTTACAGTGTCCCGGCAATTCCGGTGCTAAGATGAGTCTGATCGGCTGCGAAATGCCGAGCGAGGCCGAAATCCGCAATCTTTGGATTGAAATTTTCATCCAGAAGAACATTACTACTCTTTATGTCTCTATGGATTATTCTCATCTTACAACCTTCATGAAGATGTGCAAGCCCCTCAGCTGTTCCCAGGATAATATTGAAACGCTGCTTCCAATTCAGAATCTGAACCTTGTTCTTATCTAGGAGAGAAGAAGGATCATGAGAAATCAAGCACAAAGAAGCATCAAAAGATGGTTAAAAAGAGCGAAATGTTACCGAAAATGAACTGATCGAGGCTCCGATTCGGAACATACTCGTAGACCAGCAGACTTTCAGGTCCTTCAATGCTGCAGCCTAAAAGGGTAACAAGGTTTTTGTGTTGGATTCCACGGATCAAATTCACTTCATTGAAGAACTCATCAACCCATTGCCTGGTATGGAAAACCAACCTCTTCACAGCAACAATCTGCCGATTTGGAAGAGTTCCTTTATATACAGAACCAGCTCCACCTTGGCCTATCTTACTTGATGGGCTGAAGTAATTAGTGGCCTTTTCAAGCGTTTCATACTTGAAATTCACATCGGAATCCCTAAAGGAAATTGGAATAAGGGATTGTTTTTTCTTCTCTGGAAGAACAGAAGAATGCAATGGAAAATTTAGAGGAATCCACAGATCAATCACAAGATTCTTGACAATTTAGCTGCTGATAGTAAATGCATAACATACAGGGCAATAACAACATCTCCATCCATTGTTTAAATCTGAAAATTTAGCTGAGCTTACCTTTCTTTAAGTTTGATATTCTTGTATAGCATGCAAAAGCAGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG

mRNA sequence

ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTACCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAGAAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAAAATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTCATGCAAAAGCAGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG

Coding sequence (CDS)

ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTACCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAGAAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAAAATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTCATGCAAAAGCAGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG

Protein sequence

MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTIDTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQDLLEAPQGFKNGGCSGMETFLSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI
Homology
BLAST of Carg09717 vs. NCBI nr
Match: KAG7017774.1 (putative cytochrome c oxidase subunit 5C-4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0

Query: 1   MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTI 60
           MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTI
Sbjct: 1   MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTI 60

Query: 61  DTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQDLLEAPQGFKNGGCSGMETF 120
           DTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQDLLEAPQGFKNGGCSGMETF
Sbjct: 61  DTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQDLLEAPQGFKNGGCSGMETF 120

Query: 121 LSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI 180
           LSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI
Sbjct: 121 LSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI 180

BLAST of Carg09717 vs. NCBI nr
Match: XP_022935291.1 (putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata] >XP_022935292.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata])

HSP 1 Score: 111.3 bits (277), Expect = 8.7e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Sbjct: 1  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 51

BLAST of Carg09717 vs. NCBI nr
Match: XP_023528587.1 (putative cytochrome c oxidase subunit 5C-4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          MVG+VVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Sbjct: 1  MVGNVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 51

BLAST of Carg09717 vs. NCBI nr
Match: XP_022983411.1 (putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima] >XP_022983412.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima])

HSP 1 Score: 108.6 bits (270), Expect = 5.6e-20
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 0

Query: 1  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          MVG+VVYKGPS IKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Sbjct: 1  MVGNVVYKGPSAIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 51

BLAST of Carg09717 vs. NCBI nr
Match: XP_038906018.1 (putative cytochrome c oxidase subunit 5C-4 [Benincasa hispida])

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 0

Query: 1  MVGSVV-YKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          MVG V  YKGPS+IKEIIYGVG+GLMAGGLWKMHHWNYQR+TKEFYELLDRG
Sbjct: 1  MVGVVAYYKGPSIIKEIIYGVGIGLMAGGLWKMHHWNYQRKTKEFYELLDRG 52

BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: Q9FNE0 (Putative cytochrome c oxidase subunit 5C-4 OS=Arabidopsis thaliana OX=3702 GN=At5g40382 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +G  VYKGPSV+KEIIYG+ +G   GGLWKMHHWN QRRTKEFY+LL++G
Sbjct: 7  IGKAVYKGPSVVKEIIYGITLGFAVGGLWKMHHWNNQRRTKEFYDLLEKG 56

BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: P19173 (Cytochrome c oxidase subunit 5C OS=Ipomoea batatas OX=4120 GN=COX5C PE=1 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 4.3e-15
Identity = 33/50 (66.00%), Postives = 43/50 (86.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          V  +VYKGPSV+KE++ G  +GL+AGG WKMHHWN QRRTKEFY++L++G
Sbjct: 6  VAHLVYKGPSVVKELVIGFSLGLVAGGFWKMHHWNSQRRTKEFYDMLEKG 55

BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: Q9LZQ0 (Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis thaliana OX=3702 GN=At3g62400 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.1e-13
Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          V     KGPSV+KE+I G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Sbjct: 6  VAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERG 55

BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: O22912 (Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At2g47380 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          V     KGPSV+KE+  G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Sbjct: 6  VAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERG 55

BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: Q9FLK2 (Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana OX=3702 GN=At5g61310 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Sbjct: 6  IAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERG 55

BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A6J1F554 (putative cytochrome c oxidase subunit 5C-4 OS=Cucurbita moschata OX=3662 GN=LOC111442219 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.2e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Sbjct: 1  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 51

BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A6J1IZ83 (putative cytochrome c oxidase subunit 5C-4 OS=Cucurbita maxima OX=3661 GN=LOC111482021 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.7e-20
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 0

Query: 1  MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          MVG+VVYKGPS IKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG
Sbjct: 1  MVGNVVYKGPSAIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 51

BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A5J5C3H0 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004608 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query: 2   VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
           +G   Y GPSV+KEIIYGV +GLMAGGLWKMHHWNYQRRTKEFY+LL++G
Sbjct: 180 IGHAAYHGPSVVKEIIYGVTLGLMAGGLWKMHHWNYQRRTKEFYDLLEKG 229

BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A087GTA8 (Cytochrome c oxidase subunit 5C OS=Arabis alpina OX=50452 GN=AALP_AA6G332300 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.7e-15
Identity = 36/50 (72.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +G  VYKGPS++KEIIYG+ +GL AGGLWKMHHWN QRRT+EFY+LL++G
Sbjct: 7  IGKAVYKGPSIVKEIIYGIALGLAAGGLWKMHHWNNQRRTREFYDLLEKG 56

BLAST of Carg09717 vs. ExPASy TrEMBL
Match: D7MJ92 (Cytochrome c oxidase subunit 5C OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_493950 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14
Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +G  VYKGPSV+KEIIYG+ +GL  GGLWKMHHWN QRRTKEFY+LL++G
Sbjct: 7  IGKAVYKGPSVVKEIIYGITLGLAVGGLWKMHHWNNQRRTKEFYDLLEKG 56

BLAST of Carg09717 vs. TAIR 10
Match: AT5G40382.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 88.2 bits (217), Expect = 7.4e-18
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +G  VYKGPSV+KEIIYG+ +G   GGLWKMHHWN QRRTKEFY+LL++G
Sbjct: 7  IGKAVYKGPSVVKEIIYGITLGFAVGGLWKMHHWNNQRRTKEFYDLLEKG 56

BLAST of Carg09717 vs. TAIR 10
Match: AT2G47380.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.9e-14
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          V     KGPSV+KE+  G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Sbjct: 6  VAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERG 55

BLAST of Carg09717 vs. TAIR 10
Match: AT5G61310.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Sbjct: 6  IAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERG 55

BLAST of Carg09717 vs. TAIR 10
Match: AT5G61310.2 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Sbjct: 6  IAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERG 55

BLAST of Carg09717 vs. TAIR 10
Match: AT5G61310.3 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 2  VGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRG 52
          +     KGPSV+KE++ G+ +GL AGGLWKMHHWN QR+T+ FY+LL+RG
Sbjct: 6  IAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERG 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7017774.11.7e-93100.00putative cytochrome c oxidase subunit 5C-4, partial [Cucurbita argyrosperma subs... [more]
XP_022935291.18.7e-21100.00putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata] >XP_022935292.1 ... [more]
XP_023528587.11.9e-2098.04putative cytochrome c oxidase subunit 5C-4 [Cucurbita pepo subsp. pepo][more]
XP_022983411.15.6e-2096.08putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima] >XP_022983412.1 pu... [more]
XP_038906018.11.2e-1788.46putative cytochrome c oxidase subunit 5C-4 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9FNE01.0e-1672.00Putative cytochrome c oxidase subunit 5C-4 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
P191734.3e-1566.00Cytochrome c oxidase subunit 5C OS=Ipomoea batatas OX=4120 GN=COX5C PE=1 SV=3[more]
Q9LZQ04.1e-1364.00Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis thaliana OX=3702 GN=At3g62400 P... [more]
O229126.9e-1362.00Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
Q9FLK29.1e-1360.00Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
Match NameE-valueIdentityDescription
A0A6J1F5544.2e-21100.00putative cytochrome c oxidase subunit 5C-4 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1IZ832.7e-2096.08putative cytochrome c oxidase subunit 5C-4 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A5J5C3H01.2e-1578.00Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004608 PE=3 SV=1[more]
A0A087GTA87.7e-1572.00Cytochrome c oxidase subunit 5C OS=Arabis alpina OX=50452 GN=AALP_AA6G332300 PE=... [more]
D7MJ921.3e-1474.00Cytochrome c oxidase subunit 5C OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=... [more]
Match NameE-valueIdentityDescription
AT5G40382.17.4e-1872.00Cytochrome c oxidase subunit Vc family protein [more]
AT2G47380.14.9e-1462.00Cytochrome c oxidase subunit Vc family protein [more]
AT5G61310.16.4e-1460.00Cytochrome c oxidase subunit Vc family protein [more]
AT5G61310.26.4e-1460.00Cytochrome c oxidase subunit Vc family protein [more]
AT5G61310.36.4e-1460.00Cytochrome c oxidase subunit Vc family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..180
NoneNo IPR availablePANTHERPTHR34372:SF3CYTOCHROME C OXIDASE SUBUNIT 5C-4-RELATEDcoord: 2..51
IPR008432Cytochrome c oxidase subunit 5cPANTHERPTHR34372CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATEDcoord: 2..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09717-RACarg09717-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005746 mitochondrial respirasome