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Carg09717 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTACCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGTGACATTACTGTTGTTCTTCCAGAGGACAATTAATGTAATTTTCGTCTTTTTTTGTAAAAATTAATTAGCTTAAATTGTAAGTTTTGTTTTCGTTTAGTTTAATGTTTATTTAAATGGTTTAAATGGATTGAAGGCGTGTATTTATATTCATAACTTTTAAATATACTATAAAATATACTATAAATTAAATTATAAATTAAATAAGGGAAAAATATTATGATATAATATCTAAAATATATTTTGTAAATAATATATTCTTCGAATTCTTTTAAGTATACAAGTATTCATATGATTTACAAGTATAGTTTCTAAATCATCTACGACATTTTTCTGATGGAATATCGCTTCTCGAGGTTTAAATTTTACCTCATGAAAGAAGTAAATTCGACTTCGAGGAGGGAGTGATATTTGAACGGCTAGACTATGAACACAGTGACGAACTACAATCCAAGAAAAATAATGAGTGTTTGGGTTGAAAAAAAGAATGTAGATGATTTGATCACGATCGAGTGACATTAACTTCAACTTAAACCCGGGAATTTTTAGGGAGGTTTTAATCGTTGGCTCGAGATTTTTGGAATATTGGAGTTTGAAGAGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAGAAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAAAATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTGTGCATAGCAGCCCTATTTGCAGAACATCCATGGCTTCCTTTGCTGGGTAATCCTTGTTCAAGCATGAGTCAATGGCTTCACTTAATCTCCCTGATTTGTACAGATCCCAAACCTGTGGCATAAGAACAATGAGAATATTATCAACTTCCTCTCTCCTTATATGATTGGTAGTCATGAATCTTACTGTTTGGAGGAGTGGGGTAGAGTTCTCTGTGAAGGAACTGTTTCGTCTACCGCAGACGATCTCGAGTATCAGCACTCCAAAGCTATAAACGTCTGCCTTTTCGGTAAGCTGTCCTCGAACGAGATATTCAGGAGCCATATAACCTCTGTCTCAACGCACATTGTTCAATTAAGAGTTTGAATAAAGTCAGATACAGATTGTGATCAAGATAGTAAGTAGAACTCTCTTACAGTGTCCCGGCAATTCCGGTGCTAAGATGAGTCTGATCGGCTGCGAAATGCCGAGCGAGGCCGAAATCCGCAATCTTTGGATTGAAATTTTCATCCAGAAGAACATTACTACTCTTTATGTCTCTATGGATTATTCTCATCTTACAACCTTCATGAAGATGTGCAAGCCCCTCAGCTGTTCCCAGGATAATATTGAAACGCTGCTTCCAATTCAGAATCTGAACCTTGTTCTTATCTAGGAGAGAAGAAGGATCATGAGAAATCAAGCACAAAGAAGCATCAAAAGATGGTTAAAAAGAGCGAAATGTTACCGAAAATGAACTGATCGAGGCTCCGATTCGGAACATACTCGTAGACCAGCAGACTTTCAGGTCCTTCAATGCTGCAGCCTAAAAGGGTAACAAGGTTTTTGTGTTGGATTCCACGGATCAAATTCACTTCATTGAAGAACTCATCAACCCATTGCCTGGTATGGAAAACCAACCTCTTCACAGCAACAATCTGCCGATTTGGAAGAGTTCCTTTATATACAGAACCAGCTCCACCTTGGCCTATCTTACTTGATGGGCTGAAGTAATTAGTGGCCTTTTCAAGCGTTTCATACTTGAAATTCACATCGGAATCCCTAAAGGAAATTGGAATAAGGGATTGTTTTTTCTTCTCTGGAAGAACAGAAGAATGCAATGGAAAATTTAGAGGAATCCACAGATCAATCACAAGATTCTTGACAATTTAGCTGCTGATAGTAAATGCATAACATACAGGGCAATAACAACATCTCCATCCATTGTTTAAATCTGAAAATTTAGCTGAGCTTACCTTTCTTTAAGTTTGATATTCTTGTATAGCATGCAAAAGCAGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTACCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAGAAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAAAATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTCATGCAAAAGCAGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG ATGGTGGGGAGTGTTGTGTACAAGGGACCAAGCGTGATAAAGGAGATAATATATGGAGTTGGGGTAGGGCTAATGGCTGGTGGTCTCTGGAAAATGCACCATTGGAATTACCAAAGGAGAACCAAGGAGTTCTATGAGTTGCTTGATCGTGGAGGAAGGATAAGCCCTCAACCCACAATAGATACAGAGAGTGGAGGATTTGTTCATGAAGGCAAGTTAGAAGAAGAAGAAGAAGAACCTGAATCTGTTGATGTGCCAGAAGAAACTTCAAGTTTGGAAACCAAGCTGCTGACTCTACAAGATCTTCTGGAGGCTCCACAGGGATTCAAAAATGGAGGTTGTTCTGGGATGGAAACCTTCCTCTCTCCTTCACTGCTTACCAGTTTCACCACCGTCGCCATTGACGGTCTTAAAGAAGCTAGAGCTTGTCATGCAAAAGCAGCTGAAATGGCGATGATCAAGGAGGCAACTGAAGCTAAAACAATGGCAGCTACAGCTCTTCTTCCAGAAAATCCTGAAGCAAAGCATAAAGAAGAGATATAG MVGSVVYKGPSVIKEIIYGVGVGLMAGGLWKMHHWNYQRRTKEFYELLDRGGRISPQPTIDTESGGFVHEGKLEEEEEEPESVDVPEETSSLETKLLTLQDLLEAPQGFKNGGCSGMETFLSPSLLTSFTTVAIDGLKEARACHAKAAEMAMIKEATEAKTMAATALLPENPEAKHKEEI Homology
BLAST of Carg09717 vs. NCBI nr
Match: KAG7017774.1 (putative cytochrome c oxidase subunit 5C-4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Carg09717 vs. NCBI nr
Match: XP_022935291.1 (putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata] >XP_022935292.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 8.7e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Carg09717 vs. NCBI nr
Match: XP_023528587.1 (putative cytochrome c oxidase subunit 5C-4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Carg09717 vs. NCBI nr
Match: XP_022983411.1 (putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima] >XP_022983412.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita maxima]) HSP 1 Score: 108.6 bits (270), Expect = 5.6e-20 Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Carg09717 vs. NCBI nr
Match: XP_038906018.1 (putative cytochrome c oxidase subunit 5C-4 [Benincasa hispida]) HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: Q9FNE0 (Putative cytochrome c oxidase subunit 5C-4 OS=Arabidopsis thaliana OX=3702 GN=At5g40382 PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: P19173 (Cytochrome c oxidase subunit 5C OS=Ipomoea batatas OX=4120 GN=COX5C PE=1 SV=3) HSP 1 Score: 82.8 bits (203), Expect = 4.3e-15 Identity = 33/50 (66.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: Q9LZQ0 (Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis thaliana OX=3702 GN=At3g62400 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.1e-13 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: O22912 (Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At2g47380 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13 Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy Swiss-Prot
Match: Q9FLK2 (Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana OX=3702 GN=At5g61310 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A6J1F554 (putative cytochrome c oxidase subunit 5C-4 OS=Cucurbita moschata OX=3662 GN=LOC111442219 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 4.2e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A6J1IZ83 (putative cytochrome c oxidase subunit 5C-4 OS=Cucurbita maxima OX=3661 GN=LOC111482021 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-20 Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A5J5C3H0 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004608 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15 Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy TrEMBL
Match: A0A087GTA8 (Cytochrome c oxidase subunit 5C OS=Arabis alpina OX=50452 GN=AALP_AA6G332300 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.7e-15 Identity = 36/50 (72.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of Carg09717 vs. ExPASy TrEMBL
Match: D7MJ92 (Cytochrome c oxidase subunit 5C OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_493950 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14 Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of Carg09717 vs. TAIR 10
Match: AT5G40382.1 (Cytochrome c oxidase subunit Vc family protein ) HSP 1 Score: 88.2 bits (217), Expect = 7.4e-18 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of Carg09717 vs. TAIR 10
Match: AT2G47380.1 (Cytochrome c oxidase subunit Vc family protein ) HSP 1 Score: 75.5 bits (184), Expect = 4.9e-14 Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Carg09717 vs. TAIR 10
Match: AT5G61310.1 (Cytochrome c oxidase subunit Vc family protein ) HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of Carg09717 vs. TAIR 10
Match: AT5G61310.2 (Cytochrome c oxidase subunit Vc family protein ) HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of Carg09717 vs. TAIR 10
Match: AT5G61310.3 (Cytochrome c oxidase subunit Vc family protein ) HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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