Carg09692 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09692
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Location	Carg_Chr14: 3503581 .. 3505839 (-)
RNA-Seq Expression	Carg09692
Synteny	Carg09692

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTTCTTTTCCTTCTTCTGATAGTTTCTTTTTTTTTTTTTTTTTCACCTCTCTAATCTCTGTTTCTTCGAGACGACAATGGCGAGCGGAATCCTGAGGAGGGCAATAGCTAGGGTTTCTGCAACTTCACCTTCAAGATTCGTTCGAATTCGAGCACATGCTTCGGCTGCCGAAGCGCAGCAAGTCGAGCAGAAAGCGGCCGCCTCAACGAACCTAAAGACATTTGCAATCTACCGATGGAACCCTGATAGTCCTTCCAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGCGGCCCCATGGTGCTAGATGCGCTTATCAAAATCAAGAACGAGGTCGACCCGACTCTGACCTTTCGCCGTTCGTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTCCGTCCGGAGCTTCCTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACTAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGCCTGTGCCTGGGAAGGAGATACTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCCTACCTCGGACCAGCCGCTTTGCTCCATGCCAATAGGTAATTCGTTCACTTTGGTTCTTTGTTTTGGTTATTCCATGCCTCTCTTTCTGTTAGAAATTAATAGAAAACAGGGACTGTTTAGAGGAATCAAGAAGCTACATGTGAAAGCTGTAGAATTCCATGATATAGTTAGGTTACGTCTTCTTAGTGCTTAGAAAGTGATCTCCTTCTCCTGCTTGGGAATTTGGCCCTTGCATGCATGGTAGAACTTGTATGATTTGATTGATTGCTTATTTTTATAGAGAATCGAGTAACTTAATTCGGTATTTATTATCTATGATTAACAAAGTTTTGATATGCCTTGGTAGACTTGATCTGAAACTCATTTGTTTGCTCTAGTTTCTTGGTGAGTTTCAACCTTAGTCCTTACTGATGTTGCATAAAAGGGTTTTTTATCCACAAAAATTTCGTCAAGAATATTAGTCTTCATTGGTGACGGCTGGAAGCCAAATTGGACATATGCTTCCTGCAACTGTCAAGAGCTTAACCTTTTATAAATGATAAGTTAGGATAATTTTATTCATTATTTTACTGGCACCCTACATGGTGGAGACAGATGTACTTTGAATGGAAGCAATAACTATGGTTGCCAATGTAAATGAAAAAGGCGAAAGGGTAATGAGTTCAAGTCTTGATAATCACTTGGGATTCGTATGCCATGAGTTTATTTGATAACGGAACATAGTAAGGAAGGTGTAGCATTTGTCTCATGCAAAAGAGTTTGGTACAAGTTTACCCAAACAACTTAAAAAAATGAAATTAGAAGATCAAAAACTTGGAAGCAATGAACAGTGATGAAGTTTTACATCTATCTAAAGAATCTTTGTATTCAACCCTGTATTCGTATATAATTCATGGCTTCATAAGTTCTTTTTTTCTATTCTTGTTTTTTTTTTCCTTCTTCTTAAAGCAGGCTTCATAAGTTCATATTGTATATCTTTTGTAATTGCATGATTTATTTGTTCCTATCGTTCACCTCACAACTTCCTATCTATCACCATGACTTTGCAAGAAGATTTACACATATGACTTTGATTAAATCGACTTCAAAAGCATTCTTAATTGTCTTATTGGCTGTTTTCTTTTTCTAATCCCCTTTGTGCATGCAGGTGGATAAGCGATAGCCGTGATGAATATACCAAAGAAAGACTTGAGGCAATAAATGATGAATTTAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCATGTCCCAAGGGTTTGAACCCTGGAAAACAGATTCAAAATATCAAACAACTTCAGCTTGTGGGTTGAGCCTAAGTTTCTAGGTACAATGAAGCACAATAATGTTCTTTTCATTCAGTTCGGATATATTTTGAGGAGATGAACTCTGTGATTTTGATATAATAACTTGTGGATCACTTACTTTCCACCCATTCTGTACTTACTTATCATTTGGGTTTGCAAATAAATGTTGATAGAAACCTTGTTTTCTTCTTGAGTTGCTGTATCAAGATCTTCCTTTATTCATCATATTTGACTAAACA

mRNA sequence

CTCTGTTCTTTTCCTTCTTCTGATAGTTTCTTTTTTTTTTTTTTTTTCACCTCTCTAATCTCTGTTTCTTCGAGACGACAATGGCGAGCGGAATCCTGAGGAGGGCAATAGCTAGGGTTTCTGCAACTTCACCTTCAAGATTCGTTCGAATTCGAGCACATGCTTCGGCTGCCGAAGCGCAGCAAGTCGAGCAGAAAGCGGCCGCCTCAACGAACCTAAAGACATTTGCAATCTACCGATGGAACCCTGATAGTCCTTCCAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGCGGCCCCATGGTGCTAGATGCGCTTATCAAAATCAAGAACGAGGTCGACCCGACTCTGACCTTTCGCCGTTCGTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTCCGTCCGGAGCTTCCTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACTAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGCCTGTGCCTGGGAAGGAGATACTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCCTACCTCGGACCAGCCGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATATACCAAAGAAAGACTTGAGGCAATAAATGATGAATTTAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCATGTCCCAAGGGTTTGAACCCTGGAAAACAGATTCAAAATATCAAACAACTTCAGCTTGTGGGTTGAGCCTAAGTTTCTAGGTACAATGAAGCACAATAATGTTCTTTTCATTCAGTTCGGATATATTTTGAGGAGATGAACTCTGTGATTTTGATATAATAACTTGTGGATCACTTACTTTCCACCCATTCTGTACTTACTTATCATTTGGGTTTGCAAATAAATGTTGATAGAAACCTTGTTTTCTTCTTGAGTTGCTGTATCAAGATCTTCCTTTATTCATCATATTTGACTAAACA

Coding sequence (CDS)

ATGGCGAGCGGAATCCTGAGGAGGGCAATAGCTAGGGTTTCTGCAACTTCACCTTCAAGATTCGTTCGAATTCGAGCACATGCTTCGGCTGCCGAAGCGCAGCAAGTCGAGCAGAAAGCGGCCGCCTCAACGAACCTAAAGACATTTGCAATCTACCGATGGAACCCTGATAGTCCTTCCAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGCGGCCCCATGGTGCTAGATGCGCTTATCAAAATCAAGAACGAGGTCGACCCGACTCTGACCTTTCGCCGTTCGTGCCGAGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTCCGTCCGGAGCTTCCTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGACATGACTAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGCCTGTGCCTGGGAAGGAGATACTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCCTACCTCGGACCAGCCGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATATACCAAAGAAAGACTTGAGGCAATAAATGATGAATTTAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCATGTCCCAAGGGTTTGAACCCTGGAAAACAGATTCAAAATATCAAACAACTTCAGCTTGTGGGTTGA

Protein sequence

MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG

Homology

[Close]

BLAST of Carg09692 vs. NCBI nr
Match: XP_022935005.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata] >KAG7017798.1 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572.0 bits (1473), Expect = 2.8e-159
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Carg09692 vs. NCBI nr
Match: XP_023527486.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.5 bits (1469), Expect = 8.1e-159
Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQK AASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKVAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Carg09692 vs. NCBI nr
Match: XP_022983213.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 568.9 bits (1465), Expect = 2.3e-158
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSAT PSRFVRIRAHA+AAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Carg09692 vs. NCBI nr
Match: XP_038898422.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 552.4 bits (1422), Expect = 2.3e-153
Identity = 266/276 (96.38%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRRAI+RVSATSPSRFVRIRAHAS AEAQQVEQKAAAS+NLKTFAIYRWNP+SPS
Sbjct: 1   MATGILRRAISRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SGASS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKISSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLV 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLV
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQLV 276

[Close]

BLAST of Carg09692 vs. NCBI nr
Match: XP_008450036.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucumis melo] >ADN34136.1 succinate dehydrogenase [Cucumis melo subsp. melo])

HSP 1 Score: 551.6 bits (1420), Expect = 3.9e-153
Identity = 263/277 (94.95%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRR ++RVSA+SPSRFVRIRAHAS AEAQQVEQKA AS+NLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]

BLAST of Carg09692 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 463.0 bits (1190), Expect = 2.4e-129
Identity = 222/280 (79.29%), Postives = 244/280 (87.14%), Query Frame = 0


Query: 1   MASGILRRAIARVSA--TSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDS 60
           MA G++ R +   S+  ++ +R +  R  ++ +EAQ          +LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSGA-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180
           CLTKI SG+  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of Carg09692 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 453.4 bits (1165), Expect = 1.9e-126
Identity = 220/278 (79.14%), Postives = 241/278 (86.69%), Query Frame = 0


Query: 1   MASGILRRAIARVSA--TSPSRFVRIRAHASAAEAQ-QVEQKAAASTNLKTFAIYRWNPD 60
           MASG++ R +    +   + +R +  R  ++ AEA+ +        +NLKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 180
           ACLTKI   AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Carg09692 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.2e-118
Identity = 207/279 (74.19%), Postives = 232/279 (83.15%), Query Frame = 0


Query: 2   ASGILRRAIARVSATSP---SRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDS 61
           A+ +LRR+ A  +  SP   SR V  + H+S+        KA A+T  KTF+IYRW+PDS
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGANT--KTFSIYRWDPDS 62

Query: 62  PS-KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 121
           PS KP L++YK+DL +CGPMVLD L+KIKNE DP+LTFRRSCREGICGSCAMNIDG NGL
Sbjct: 63  PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL 122

Query: 122 ACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 181
           ACLTKI S +S STI+PLPHMFVIKDLVVDMTNFYNQYKS+EPWLKRK  PP PGKEI Q
Sbjct: 123 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ 182

Query: 182 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 241
           +K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD++TKERL+
Sbjct: 183 TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLD 242

Query: 242 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQL 276
           +INDEFKLYRCHTI NC  ACPKGLNP K I  IK+LQL
Sbjct: 243 SINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]

BLAST of Carg09692 vs. ExPASy Swiss-Prot
Match: P21913 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhb PE=2 SV=2)

HSP 1 Score: 345.1 bits (884), Expect = 7.2e-94
Identity = 160/243 (65.84%), Postives = 193/243 (79.42%), Query Frame = 0


Query: 34  QQVEQKAAASTNLKTFAIYRWNPD-SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPT 93
           ++ +  AAA+  +KTFAIYRW+PD +  KP +Q YK+DL +CGPMVLDALIKIKNE+D T
Sbjct: 29  REAQTAAAAAPRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDST 88

Query: 94  LTFRRSCREGICGSCAMNIDGCNGLACLTKIPS--GASSTITPLPHMFVIKDLVVDMTNF 153
           LTFRRSCREGICGSCAMNI+G N LAC  +I +  G  S I PLPHM+VIKDLV D++NF
Sbjct: 89  LTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNF 148

Query: 154 YNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESY 213
           Y QYKSIEP+LK+K E     ++ LQS +DR KLDG+YECILCACCSTSCPSYWWN + Y
Sbjct: 149 YAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKY 208

Query: 214 LGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNI 273
           LGPA L+ A RW+ DSRDE+T+ERL  + D F LYRCHTI+NC + CPKGLNPGK I  I
Sbjct: 209 LGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEI 268

[Close]

BLAST of Carg09692 vs. ExPASy Swiss-Prot
Match: P21914 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster OX=7227 GN=SdhB PE=2 SV=2)

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-93
Identity = 165/272 (60.66%), Postives = 204/272 (75.00%), Query Frame = 0


Query: 7   RRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSP-SKPELQ 66
           R+ ++RV +      +R  ++ +A   QQ + K A    +K F IYRWNPD+   KP +Q
Sbjct: 7   RQILSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQ 66

Query: 67  EYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPS 126
            Y++DL+ECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LAC++KI  
Sbjct: 67  TYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDI 126

Query: 127 GASST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP-PVPGK-EILQSKKDR 186
             S +  + PLPHM+V++DLV DM NFY QY++I+PWL+RK+E     GK + LQS +DR
Sbjct: 127 NTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDR 186

Query: 187 AKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDE 246
           +KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE + ERL  + D 
Sbjct: 187 SKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDP 246

Query: 247 FKLYRCHTILNCARACPKGLNPGKQIQNIKQL 274
           F +YRCHTI+NC R CPKGLNPG+ I  IK+L
Sbjct: 247 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 278

[Close]

BLAST of Carg09692 vs. ExPASy TrEMBL
Match: A0A6J1F9C7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441997 PE=3 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.3e-159
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Carg09692 vs. ExPASy TrEMBL
Match: A0A6J1J748 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481863 PE=3 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.1e-158
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MASGILRRAIARVSAT PSRFVRIRAHA+AAEAQQVEQKAAASTNLKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Carg09692 vs. ExPASy TrEMBL
Match: E5GCD7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 1.9e-153
Identity = 263/277 (94.95%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRR ++RVSA+SPSRFVRIRAHAS AEAQQVEQKA AS+NLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]

BLAST of Carg09692 vs. ExPASy TrEMBL
Match: A0A1S3BP14 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491745 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 1.9e-153
Identity = 263/277 (94.95%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRR ++RVSA+SPSRFVRIRAHAS AEAQQVEQKA AS+NLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKIPSG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]

BLAST of Carg09692 vs. ExPASy TrEMBL
Match: A0A0A0LBZ3 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_3G595230 PE=3 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.5e-152
Identity = 261/277 (94.22%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60
           MA+GILRRA++RVSA+SPSRF+RIRAHAS A+AQQV+QKAAAS++LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277

[Close]

BLAST of Carg09692 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 463.0 bits (1190), Expect = 1.7e-130
Identity = 222/280 (79.29%), Postives = 244/280 (87.14%), Query Frame = 0


Query: 1   MASGILRRAIARVSA--TSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDS 60
           MA G++ R +   S+  ++ +R +  R  ++ +EAQ          +LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSGA-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180
           CLTKI SG+  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of Carg09692 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 220/278 (79.14%), Postives = 241/278 (86.69%), Query Frame = 0


Query: 1   MASGILRRAIARVSA--TSPSRFVRIRAHASAAEAQ-QVEQKAAASTNLKTFAIYRWNPD 60
           MASG++ R +    +   + +R +  R  ++ AEA+ +        +NLKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 180
           ACLTKI   AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Carg09692 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 220/278 (79.14%), Postives = 241/278 (86.69%), Query Frame = 0


Query: 1   MASGILRRAIARVSA--TSPSRFVRIRAHASAAEAQ-QVEQKAAASTNLKTFAIYRWNPD 60
           MASG++ R +    +   + +R +  R  ++ AEA+ +        +NLKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 180
           ACLTKI   AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IKQLQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Carg09692 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 322.8 bits (826), Expect = 2.7e-88
Identity = 155/234 (66.24%), Postives = 178/234 (76.07%), Query Frame = 0


Query: 47  KTFAIYRWNPDSP-SKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICG 106
           K F IYRWNPD P SKP LQ + +DL  CGPMVLD L KIK E D +L++RRSCREGICG
Sbjct: 67  KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICG 126

Query: 107 SCAMNIDGCNGLACLTKIPSGAS--STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
           SC+MNIDG N +ACL  I    S  + ITPLPHM+VIKDLVVD+TNFY QYKS+EPWLK 
Sbjct: 127 SCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKT 186

Query: 167 KSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 226
           + +PP  G+E  QS KDR KLDG+YECILCACC+TSCPSYWWNPE + GPAALL A RWI
Sbjct: 187 R-KPPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWI 246

Query: 227 SDSRDEYTKERLEAIND-EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLV 277
           SDSRDEY +ERL+AI + E K+YRC  I NC   CPKGLNP   I  +K   L+
Sbjct: 247 SDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPASAILKMKSKHLL 299

The following BLAST results are available for this feature:

BLAST of Carg09692 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935005.1	2.8e-159	100.00	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
XP_023527486.1	8.1e-159	99.64	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur...	[more]
XP_022983213.1	2.3e-158	99.28	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur...	[more]
XP_038898422.1	2.3e-153	96.38	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benin...	[more]
XP_008450036.1	3.9e-153	94.95	PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochond...	[more]

BLAST of Carg09692 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB02	2.4e-129	79.29	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara...	[more]
Q8LBZ7	1.9e-126	79.14	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara...	[more]
Q9S827	7.2e-118	74.19	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory...	[more]
P21913	7.2e-94	65.84	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattu...	[more]
P21914	1.2e-93	60.66	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Droso...	[more]

BLAST of Carg09692 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9C7	1.3e-159	100.00	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1J748	1.1e-158	99.28	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
E5GCD7	1.9e-153	94.95	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]
A0A1S3BP14	1.9e-153	94.95	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]
A0A0A0LBZ3	3.5e-152	94.22	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]

BLAST of Carg09692 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40650.1	1.7e-130	79.29	succinate dehydrogenase 2-2	[more]
AT3G27380.1	1.3e-127	79.14	succinate dehydrogenase 2-1	[more]
AT3G27380.2	1.3e-127	79.14	succinate dehydrogenase 2-1	[more]
AT5G65165.1	2.7e-88	66.24	succinate dehydrogenase 2-3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	TIGRFAM	TIGR00384	TIGR00384	coord: 51..271 e-value: 5.1E-84 score: 279.1
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 36..146 e-value: 1.9E-40 score: 139.2
IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	PFAM	PF13085	Fer2_3	coord: 48..151 e-value: 1.4E-32 score: 111.9
IPR009051	Alpha-helical ferredoxin	GENE3D	1.10.1060.10		coord: 147..276 e-value: 2.0E-52 score: 178.4
None	No IPR available	PFAM	PF13534	Fer4_17	coord: 189..262 e-value: 2.4E-9 score: 37.6
None	No IPR available	PANTHER	PTHR11921:SF44	SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL	coord: 3..274
None	No IPR available	PANTHER	PTHR11921	SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN	coord: 3..274
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 147..273
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 99..107
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 190..201
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..137 score: 9.447795
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 62..112 e-value: 0.00552375 score: 33.5224
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 180..210 score: 7.894782
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 46..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09692-RA	Carg09692-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045273	respiratory chain complex II
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity