Carg09574 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGTCTGCAGAGATCTGTCGTGTCATTCCGGCGGCAGGGATCTTCCGGTGTCGTTTGGGAAGACAAGTTCATCTCGGAGGAGCTCAACAAGGCGGCCCCAAGCGACGGTGAATCCAGCGCCACGCCCGAGGTGAAGACGGGAAGAAATATTCCGCCGATCAAGACGATTGACCGGACCCGATCAAACCGCGGGGGAGGACGGGGGTTCCGGAGCAAAGATATGGCGGCGCCGGCAGTGGAGCCCCCGTCACCAAGAGTCTCTGCTTGTGGCCTCTGCAGCGCTTTCGGGAAATCCGGCGCCAAGAAACAGAGAGCGGCGGCGGCGGCGGCTGGCAAGCGCCGATCACGGTAG ATGGCTGGTCTGCAGAGATCTGTCGTGTCATTCCGGCGGCAGGGATCTTCCGGTGTCGTTTGGGAAGACAAGTTCATCTCGGAGGAGCTCAACAAGGCGGCCCCAAGCGACGGTGAATCCAGCGCCACGCCCGAGGTGAAGACGGGAAGAAATATTCCGCCGATCAAGACGATTGACCGGACCCGATCAAACCGCGGGGGAGGACGGGGGTTCCGGAGCAAAGATATGGCGGCGCCGGCAGTGGAGCCCCCGTCACCAAGAGTCTCTGCTTGTGGCCTCTGCAGCGCTTTCGGGAAATCCGGCGCCAAGAAACAGAGAGCGGCGGCGGCGGCGGCTGGCAAGCGCCGATCACGGTAG ATGGCTGGTCTGCAGAGATCTGTCGTGTCATTCCGGCGGCAGGGATCTTCCGGTGTCGTTTGGGAAGACAAGTTCATCTCGGAGGAGCTCAACAAGGCGGCCCCAAGCGACGGTGAATCCAGCGCCACGCCCGAGGTGAAGACGGGAAGAAATATTCCGCCGATCAAGACGATTGACCGGACCCGATCAAACCGCGGGGGAGGACGGGGGTTCCGGAGCAAAGATATGGCGGCGCCGGCAGTGGAGCCCCCGTCACCAAGAGTCTCTGCTTGTGGCCTCTGCAGCGCTTTCGGGAAATCCGGCGCCAAGAAACAGAGAGCGGCGGCGGCGGCGGCTGGCAAGCGCCGATCACGGTAG MAGLQRSVVSFRRQGSSGVVWEDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDRTRSNRGGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAAAGKRRSR Homology
BLAST of Carg09574 vs. NCBI nr
Match: KAG7014127.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 224.6 bits (571), Expect = 4.6e-55 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Carg09574 vs. NCBI nr
Match: KAG6575586.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Carg09574 vs. NCBI nr
Match: XP_023549291.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.9 bits (551), Expect = 9.6e-53 Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Carg09574 vs. NCBI nr
Match: XP_022991595.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 214.5 bits (545), Expect = 4.8e-52 Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of Carg09574 vs. NCBI nr
Match: XP_008461094.1 (PREDICTED: uncharacterized protein At1g15400-like [Cucumis melo] >KAA0058767.1 uncharacterized protein E6C27_scaffold339G002400 [Cucumis melo var. makuwa] >TYK10561.1 uncharacterized protein E5676_scaffold459G002140 [Cucumis melo var. makuwa]) HSP 1 Score: 175.3 bits (443), Expect = 3.2e-40 Identity = 93/118 (78.81%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of Carg09574 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 8.9e-17 Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Carg09574 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 7.5e-16 Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Carg09574 vs. ExPASy TrEMBL
Match: A0A6J1JTD9 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111488162 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52 Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of Carg09574 vs. ExPASy TrEMBL
Match: A0A5D3CFK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002140 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 93/118 (78.81%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of Carg09574 vs. ExPASy TrEMBL
Match: A0A1S3CEE2 (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 93/118 (78.81%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of Carg09574 vs. ExPASy TrEMBL
Match: A0A6J1KGD4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111494889 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38 Identity = 92/119 (77.31%), Postives = 100/119 (84.03%), Query Frame = 0
BLAST of Carg09574 vs. ExPASy TrEMBL
Match: A0A6J1HM35 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111464222 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.8e-36 Identity = 90/122 (73.77%), Postives = 99/122 (81.15%), Query Frame = 0
BLAST of Carg09574 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 87.8 bits (216), Expect = 6.3e-18 Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Carg09574 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 5.3e-17 Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Carg09574 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 5.3e-17 Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Carg09574 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 5.3e-17 Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = 0
BLAST of Carg09574 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 9.4e-14 Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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