Carg09524 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09524
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ras-related protein Rab7
Location	Carg_Chr17: 6644598 .. 6646691 (-)
RNA-Seq Expression	Carg09524
Synteny	Carg09524

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCGTGCTTTTCATCCATGGCTTCACGCAGGCGCATACTTTTGAAAGTCATTATCCTTGGCGATAGTGGGTGAGCTTTCAATTTTCCTTTTATTTCTTTATCGCATTTTGATTCTGGTTCCTTGAATTTGAGATAATCGAAGACGGTATGGTGGGGGAATTCGGAAACTCATAAATCCTGGACCCGTTCCGTGTTCTAGTTCTTGTTTTTTTTCTGTTCTTCCTTTATTGGATGTGATGGATTGTTTTTCCCTAATTAAGTTTATGCAATTTCTGGCAGCGTGGGGAAGACATCGCTAATGAATCAGTATGCGTTTGAATCCGAAACTTTGAACGTTTGTTTTGGTACTCATTTCATTATAGGGTTGTTTAATTGCCTGTTCGGTTTGCTACTTTTATTTGGATGACTAGGTATGTGAATCGTAAGTTTAGCAATCAATACAAGGCGACCATTGGAGCAGATTTTCTCACGAAGGAAGTTCAGCTCGATGACAGATCATTCACATTACAAGTAAGTATGGCTATAGTAGCTCTACTGTTTTCATCTGTTGGATATTCTGTTTTTCAATGGAGCTGTGTGGAATGTGTTCAAAGTTAATGGCCTCTAATGGCTTCTCTGGTTACTAAGCATTAGCAATTCATGCTAGGATTGGTCATTGAGGATCTCTAGAAGTTCTAGTTTATGAAATTTATGACGTTCGCTCATGATATTTGAAATGAAAAGCAATTCATGTCGAGGATTGTTGGGAGAGAGTCCAACGTTGGCTAATTAAGGGAATAATCCTGAGTTTATAAGTAATGAATACATCTCCATTGGTATGAGGTCTTTTTGGGAAACCAAAAGCAAAGTAACGAAAGTTTATGCTCAAAGTGGACAATATCATATCATTGTGGAGAGTCGTGATTTCTAACATGGTATCAGAGTCATGCTCTTAACTTAGCCACGTCAATAGAATCCTCAAATTTTTGAACAAAGAAGTTGTGACCCTCGAATTGTAGTCAAAAGTGACTCAAGTGTCGAACAAATGTGTACTTTGTTCGAGAGCTTCAGAGAAAGGAGTCGAGCTTCAATTAAGGAGAGGCTGTTTGAGGGCTCGTTAAGCCTCAGGGGAGGTTCTATGGTGTACTTTGCTCAAGTGGAGGATTGTTGAGGATTGTTGGGAGAGAGTTCCACCTTGGCTAATTAAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTACGAGAATTTATGCTCAAAGTGGACAATAATAATATCATATTATTGTGGAGGGTCGTGATTTCTAACCACTGTGGTTTATATCTTTACTCTGTGATAATAATTATCTTTGCTATTCCTCTATGACTCGGTTACGTTTGAGATAGAATTGTTTCCCTTCCTTCCCATGGTTGTGGTTTGGATTAGTTTATATAAATATAGGAAATATTCTATGGTTTGTTCATTCTTTTTTGTTGAGAAGCTGGTGTGGGTTTGCCTTAAAATGTCTTGAGATGGACGATTTATATGTGTAGTGTCAAAATGCAGATCTGGGACACAGCTGGTCAAGAACGATTCCAAAGTCTCGGAGTGGCGTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTTTATGACGTGAACGTTATGAAATCATTTGATAATCTTAACAACTGGCGAAAAGAGTTTCTAATTCAGGTCGGTATTGATTCGGTGTCGATACTAGATGGATACAAGCCTATGGCATCATATACTTGTTCTTAATGAAAGCCTTTTGTTTCTTTATGTTTAGGCTAGTCCATCTGATCCCGAGAACTTCCCTTTTGTCGTATTGGGGAACAAGGTCGACGTTGATGGTGGGAACAGTCGAGTGGTGAGTTCTGCCCGGTTTTGGTTTTATCATGGTAACCTGAATTACTAGGCCAGAGTGAGGATTGTTCTTTTCTGCTTTAATGGTGTTGTAGGTTTCTGAGAAGAAAGCAAAGGCATGGTGTGCTTCAAAAGGAAACATACCATACTTTGAAACGTCTGCAAAAGAAGGATTCAATGTGGATGCGGCATTTCAATGTATAGCCAAAAATGCTCTCAAGAATGAACCAGAAGAAGAA

mRNA sequence

ATTTCGTGCTTTTCATCCATGGCTTCACGCAGGCGCATACTTTTGAAAGTCATTATCCTTGGCGATAGTGGGTATGTGAATCGTAAGTTTAGCAATCAATACAAGGCGACCATTGGAGCAGATTTTCTCACGAAGGAAGTTCAGCTCGATGACAGATCATTCACATTACAAATCTGGGACACAGCTGGTCAAGAACGATTCCAAAGTCTCGGAGTGGCGTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTTTATGACGTGAACGTTATGAAATCATTTGATAATCTTAACAACTGGCGAAAAGAGTTTCTAATTCAGGCTAGTCCATCTGATCCCGAGAACTTCCCTTTTGTCGTATTGGGGAACAAGGTCGACGTTGATGGTGGGAACAGTCGAGTGGTTTCTGAGAAGAAAGCAAAGGCATGGTGTGCTTCAAAAGGAAACATACCATACTTTGAAACGTCTGCAAAAGAAGGATTCAATGTGGATGCGGCATTTCAATGTATAGCCAAAAATGCTCTCAAGAATGAACCAGAAGAAGAA

Coding sequence (CDS)

ATGGCTTCACGCAGGCGCATACTTTTGAAAGTCATTATCCTTGGCGATAGTGGGTATGTGAATCGTAAGTTTAGCAATCAATACAAGGCGACCATTGGAGCAGATTTTCTCACGAAGGAAGTTCAGCTCGATGACAGATCATTCACATTACAAATCTGGGACACAGCTGGTCAAGAACGATTCCAAAGTCTCGGAGTGGCGTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTTTATGACGTGAACGTTATGAAATCATTTGATAATCTTAACAACTGGCGAAAAGAGTTTCTAATTCAGGCTAGTCCATCTGATCCCGAGAACTTCCCTTTTGTCGTATTGGGGAACAAGGTCGACGTTGATGGTGGGAACAGTCGAGTGGTTTCTGAGAAGAAAGCAAAGGCATGGTGTGCTTCAAAAGGAAACATACCATACTTTGAAACGTCTGCAAAAGAAGGATTCAATGTGGATGCGGCATTTCAATGTATAGCCAAAAATGCTCTCAAGAATGAACCAGAAGAAGAA

Protein sequence

MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE

Homology

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BLAST of Carg09524 vs. NCBI nr
Match: KAG7014077.1 (Ras-related protein Rab7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.4 bits (921), Expect = 1.8e-95
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQER 60
           MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQER
Sbjct: 1   MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQER 60

Query: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDV 120
           FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDV
Sbjct: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDV 120

Query: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE 176
           DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE
Sbjct: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE 175

[Close]

BLAST of Carg09524 vs. NCBI nr
Match: XP_022992399.1 (ras-related protein Rab7-like [Cucurbita maxima])

HSP 1 Score: 351.7 bits (901), Expect = 3.7e-93
Identity = 175/184 (95.11%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRRILLKVIILGDSG         YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ
Sbjct: 1   MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180

[Close]

BLAST of Carg09524 vs. NCBI nr
Match: KAG6575533.1 (Ras-related protein Rab7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 351.7 bits (901), Expect = 3.7e-93
Identity = 175/184 (95.11%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRRILLKVIILGDSG         YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ
Sbjct: 1   MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180

[Close]

BLAST of Carg09524 vs. NCBI nr
Match: XP_022953262.1 (ras-related protein RABG3d-like [Cucurbita moschata])

HSP 1 Score: 351.7 bits (901), Expect = 3.7e-93
Identity = 175/184 (95.11%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRRILLKVIILGDSG         YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ
Sbjct: 1   MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180

[Close]

BLAST of Carg09524 vs. NCBI nr
Match: RXH69105.1 (hypothetical protein DVH24_031438 [Malus domestica])

HSP 1 Score: 348.6 bits (893), Expect = 3.1e-92
Identity = 168/175 (96.00%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQER 60
           MASRRR+LLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQ +DR FTLQIWDTAGQER
Sbjct: 1   MASRRRMLLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 60

Query: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDV 120
           FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWR+EFLIQASPSDPENFPFVVLGNK+DV
Sbjct: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKIDV 120

Query: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE 176
           DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVD AFQCIAKNALKNEPEEE
Sbjct: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALKNEPEEE 175

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BLAST of Carg09524 vs. ExPASy Swiss-Prot
Match: Q9XER8 (Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 8.6e-93
Identity = 168/184 (91.30%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRR+LLKVIILGDSG         YVNRKFSNQYKATIGADFLTKEVQ DDR FTLQ
Sbjct: 1   MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLV+DVNVMKSFDNLNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAF+CIA+NALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNE 180

[Close]

BLAST of Carg09524 vs. ExPASy Swiss-Prot
Match: O24461 (Ras-related protein Rab7 OS=Prunus armeniaca OX=36596 PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.1e-91
Identity = 165/184 (89.67%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRR+LLKVIILGDSG         YVNRKFSNQYKATIGADFLTKEVQ +DR FTLQ
Sbjct: 1   MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSF+NLNNWR+EFLIQA+PSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNK+DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVD AFQCIAKNAL NE
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNE 180

[Close]

BLAST of Carg09524 vs. ExPASy Swiss-Prot
Match: Q9C820 (Ras-related protein RABG3d OS=Arabidopsis thaliana OX=3702 GN=RABG3D PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 2.8e-91
Identity = 164/184 (89.13%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           M+SRRR+LLKVIILGDSG         +VNRKFSNQYKATIGADFLTKEVQ+DDR FTLQ
Sbjct: 1   MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNK DVDGG SRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAF+CI KNA KNE
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180

[Close]

BLAST of Carg09524 vs. ExPASy Swiss-Prot
Match: Q9LW76 (Ras-related protein RABG3c OS=Arabidopsis thaliana OX=3702 GN=RABG3C PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 3.4e-89
Identity = 161/184 (87.50%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRR+LLKVIILGDSG         +VNRKFSNQYKATIGADFLTKEVQ+DDR FTLQ
Sbjct: 1   MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLV DVNVMKSF+NLNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNK DVDGG SRVV+EKKAK+WCASKGNIPYFETSAK+G NVDAAF+CIAKNALKNE
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180

[Close]

BLAST of Carg09524 vs. ExPASy Swiss-Prot
Match: Q40787 (Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 4.4e-89
Identity = 162/184 (88.04%), Postives = 168/184 (91.30%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRR LLKVIILGDSG         YVN+KFSNQYKATIGADFLTKEVQ +DR FTLQ
Sbjct: 1   MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWR+EFLIQASPSDP+NFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           V+LGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEG NV+ AFQCI KNALKNE
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE 180

[Close]

BLAST of Carg09524 vs. ExPASy TrEMBL
Match: A0A6J1JXF8 (ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111488718 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93
Identity = 175/184 (95.11%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRRILLKVIILGDSG         YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ
Sbjct: 1   MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180

[Close]

BLAST of Carg09524 vs. ExPASy TrEMBL
Match: A0A6J1GMR9 (ras-related protein RABG3d-like OS=Cucurbita moschata OX=3662 GN=LOC111455864 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93
Identity = 175/184 (95.11%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRRILLKVIILGDSG         YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ
Sbjct: 1   MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 180

[Close]

BLAST of Carg09524 vs. ExPASy TrEMBL
Match: A0A2N9HRF3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42091 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.1e-93
Identity = 169/175 (96.57%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQER 60
           MASRRR+LLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQ +DR FTLQIWDTAGQER
Sbjct: 1   MASRRRMLLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 60

Query: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDV 120
           FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWR+EFLIQASPSDPENFPFVVLGNK+DV
Sbjct: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKIDV 120

Query: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE 176
           DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE
Sbjct: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE 175

[Close]

BLAST of Carg09524 vs. ExPASy TrEMBL
Match: A0A498IZA3 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000199 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.5e-92
Identity = 168/175 (96.00%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQER 60
           MASRRR+LLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQ +DR FTLQIWDTAGQER
Sbjct: 1   MASRRRMLLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 60

Query: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDV 120
           FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWR+EFLIQASPSDPENFPFVVLGNK+DV
Sbjct: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKIDV 120

Query: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE 176
           DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVD AFQCIAKNALKNEPEEE
Sbjct: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALKNEPEEE 175

[Close]

BLAST of Carg09524 vs. ExPASy TrEMBL
Match: A0A498HHW8 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_031438 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.5e-92
Identity = 168/175 (96.00%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQIWDTAGQER 60
           MASRRR+LLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQ +DR FTLQIWDTAGQER
Sbjct: 1   MASRRRMLLKVIILGDSGYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 60

Query: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPFVVLGNKVDV 120
           FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWR+EFLIQASPSDPENFPFVVLGNK+DV
Sbjct: 61  FQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKIDV 120

Query: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEEE 176
           DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVD AFQCIAKNALKNEPEEE
Sbjct: 121 DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALKNEPEEE 175

[Close]

BLAST of Carg09524 vs. TAIR 10
Match: AT1G52280.1 (RAB GTPase homolog G3D )

HSP 1 Score: 335.9 bits (860), Expect = 2.0e-92
Identity = 164/184 (89.13%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           M+SRRR+LLKVIILGDSG         +VNRKFSNQYKATIGADFLTKEVQ+DDR FTLQ
Sbjct: 1   MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNK DVDGG SRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAF+CI KNA KNE
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180

[Close]

BLAST of Carg09524 vs. TAIR 10
Match: AT3G16100.1 (RAB GTPase homolog G3C )

HSP 1 Score: 328.9 bits (842), Expect = 2.4e-90
Identity = 161/184 (87.50%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           MASRRR+LLKVIILGDSG         +VNRKFSNQYKATIGADFLTKEVQ+DDR FTLQ
Sbjct: 1   MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLV DVNVMKSF+NLNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VVLGNK DVDGG SRVV+EKKAK+WCASKGNIPYFETSAK+G NVDAAF+CIAKNALKNE
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180

[Close]

BLAST of Carg09524 vs. TAIR 10
Match: AT3G18820.1 (RAB GTPase homolog G3F )

HSP 1 Score: 312.4 bits (799), Expect = 2.3e-85
Identity = 155/184 (84.24%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           M SRRR LLKVIILGDSG         YVN+KFSNQYKATIGADFLTKEVQ +DR FTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           V++GNKVDVD GNSRVVSEKKAKAWCASKGNIPYFETSAK G NV+ AFQCIAK+ALK+ 
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180

[Close]

BLAST of Carg09524 vs. TAIR 10
Match: AT1G49300.1 (RAB GTPase homolog G3E )

HSP 1 Score: 301.6 bits (771), Expect = 4.1e-82
Identity = 148/184 (80.43%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           M SRRR LLKVIILGDSG         YVN+KFSNQYKATIGADFLTKEVQ +DR FTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVN  KSF++LNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VV+GNK+DVDGG+SRVVSEKKA+AWCASKGNIPY+ETSAK G NV+ AF CI  NA+K+ 
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

[Close]

BLAST of Carg09524 vs. TAIR 10
Match: AT1G49300.2 (RAB GTPase homolog G3E )

HSP 1 Score: 301.6 bits (771), Expect = 4.1e-82
Identity = 148/184 (80.43%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MASRRRILLKVIILGDSG---------YVNRKFSNQYKATIGADFLTKEVQLDDRSFTLQ 60
           M SRRR LLKVIILGDSG         YVN+KFSNQYKATIGADFLTKEVQ +DR FTLQ
Sbjct: 1   MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWRKEFLIQASPSDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVYDVN  KSF++LNNWR+EFLIQASPSDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120

Query: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE 176
           VV+GNK+DVDGG+SRVVSEKKA+AWCASKGNIPY+ETSAK G NV+ AF CI  NA+K+ 
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180

The following BLAST results are available for this feature:

BLAST of Carg09524 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014077.1	1.8e-95	100.00	Ras-related protein Rab7, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022992399.1	3.7e-93	95.11	ras-related protein Rab7-like [Cucurbita maxima]	[more]
KAG6575533.1	3.7e-93	95.11	Ras-related protein Rab7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022953262.1	3.7e-93	95.11	ras-related protein RABG3d-like [Cucurbita moschata]	[more]
RXH69105.1	3.1e-92	96.00	hypothetical protein DVH24_031438 [Malus domestica]	[more]

BLAST of Carg09524 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XER8	8.6e-93	91.30	Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1	[more]
O24461	2.1e-91	89.67	Ras-related protein Rab7 OS=Prunus armeniaca OX=36596 PE=2 SV=1	[more]
Q9C820	2.8e-91	89.13	Ras-related protein RABG3d OS=Arabidopsis thaliana OX=3702 GN=RABG3D PE=2 SV=1	[more]
Q9LW76	3.4e-89	87.50	Ras-related protein RABG3c OS=Arabidopsis thaliana OX=3702 GN=RABG3C PE=2 SV=1	[more]
Q40787	4.4e-89	88.04	Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1	[more]

BLAST of Carg09524 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXF8	1.8e-93	95.11	ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111488718 PE=4 S...	[more]
A0A6J1GMR9	1.8e-93	95.11	ras-related protein RABG3d-like OS=Cucurbita moschata OX=3662 GN=LOC111455864 PE...	[more]
A0A2N9HRF3	3.1e-93	96.57	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42091 PE=4 SV=1	[more]
A0A498IZA3	1.5e-92	96.00	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000199 PE=4 SV=1	[more]
A0A498HHW8	1.5e-92	96.00	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_031438 PE=4 SV=1	[more]

BLAST of Carg09524 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52280.1	2.0e-92	89.13	RAB GTPase homolog G3D	[more]
AT3G16100.1	2.4e-90	87.50	RAB GTPase homolog G3C	[more]
AT3G18820.1	2.3e-85	84.24	RAB GTPase homolog G3F	[more]
AT1G49300.1	4.1e-82	80.43	RAB GTPase homolog G3E	[more]
AT1G49300.2	4.1e-82	80.43	RAB GTPase homolog G3E	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 41..63 score: 49.62 coord: 107..120 score: 40.9 coord: 145..167 score: 40.32 coord: 23..39 score: 35.89
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..170 e-value: 2.5E-79 score: 279.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..170 e-value: 4.8E-14 score: 62.7
None	No IPR available	PANTHER	PTHR47981	RAB FAMILY	coord: 1..175
None	No IPR available	PANTHER	PTHR47981:SF14	BNAA05G14990D PROTEIN	coord: 1..175
None	No IPR available	PROSITE	PS51419	RAB	coord: 4..175 score: 26.988903
None	No IPR available	CDD	cd01862	Rab7	coord: 9..173 e-value: 1.06646E-120 score: 336.174
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..170 e-value: 4.9E-9 score: -3.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 19..168 e-value: 1.6E-45 score: 154.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..175 score: 13.193718
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 22..163 e-value: 1.3E-18 score: 65.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..175 e-value: 6.4E-58 score: 197.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09524-RA	Carg09524-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding