Carg09359 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09359
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Poly(A)-specific ribonuclease
Location	Carg_Chr05: 1669416 .. 1676225 (+)
RNA-Seq Expression	Carg09359
Synteny	Carg09359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATTGGCTTTTCTTTACCGTTCTTACTCTGGCGCTGGTTTTCCGACGCCCCATCTGTTTCTTCTCAGATCCCGAGCCCTGTTCGTCGTCTATTTTTTGTTCTCTCACTTAGGGTTTTGTCGTTTTGTCGCTCTTATCGAGTTCACCTTGGAGGGATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACATAGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGTGATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACCTTCCACAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTCACTTGCCGAGGCTTACCAGAAAAGCAGGACGGATTCTTTGACCTGATCAATGTCTATTTCCCAGTGGTTTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTTCATGGTGGGCTGAACAAGCTTGCGGAGTTATTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTCTACTTTTAGGAAGTTAAGGAATACCTTTTTCAATGGATCTATACAGAAATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGAAATTGAAGAGAATTACCAAGTATTTGTAGAAGTGTGAGACTTTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACTGTTTTCCGCTTTCCTTCCCTGTAATAGAAACCTCCGACTGTTTTTCGCAGCTTGTGGTTTCTTGTAAATTATGGCAGTTAGTGTTTCAATAAGAATCTTAATGACGTTTCTTTGAATGGGTTTTCACTTGTTTTGTGAGCTTACGTTCTTACATAGTCCTTTGGGTTATTAATTATGCAAGGCTCCAAAGCTACTTGGATTGATACACATTGTTGCCAATTGATCATATTTCTTTAACAACCAACTCGGTGATGGGAATTTTCAAGTCTTTCAACTGTTTTCTCCTGCTCTGATGATGTGACTGATTAGCTTTGTCTCCGGTGATGCCATTAGGATAGATATTGATTAGCTTTGTCTCCATGGATTAGATTGGAATCTGCTAGGAACTAACCGCCTGTCTCGCCCGTTAAGTTAGATCAGTTTTCTGTCATATTGGACACTTTTTTGGTTTCAGTAGTTGTTTGTATCTGATGATCCTTCAAGGCCCTCTCTATTCTTTGATTGTTATCTGTTTGATTGTCTTGATGTTAATGGCTTATTTTCTTCCACTTCCTATTGAACATTTGCAGACTCTATTAATACGTATGTTTTGAGGTATCTTTGTAGCTAATGTTTCATTTGCTGGTATGATTATAGAGTTAAACTGTTCTTTATATGGTACTGTCTTAGCACACGATATAGCATTGGTTACATTATCTTTTCTGATTTTAATCATGCACGAAACTCAGACGTATCTCTGGCTTGGAAATTCAGAATCGAACGAACGAGCCATGGAGATAGATCGATTCCTCTGCACATCAGGTGAGCATTGTATATAAGCTTTAGTTTGAAATTCTCACTTTGTAGCCATGTCTGATGAGATTCAATGCATTTCCCAACAATTTTAAGAGAGATGCATCCTATTACGGTTGCATATTAGTTTCAGCTGTCAAATCTCAAATCATATTTCTCAGCTTGACTTCTAACCAATTGCTCATTTGATCTGGTGGGGCAGTGGAATCATGATAGTTTTAGTGAAATTTCTGCCACAGTGATCTTAAAACTCTGAAATCTGAGAGAATTTACACATCTAAAACTGTTCATATTTGTACTGTCTTGTTTTGGTATTGCAGACATGGCCTGGAGCCTAAGCAAGTTGGAAACCAAGGAAACTGAACCAACCTCGGGTATACACAAAACCTTTTGACCATTTTTTAATCTCATGTTACCTCTACAATTCACTGCACTCTGCTGTTCATAAGGATTTGGATTTGATATGAAGCACATCTTCTTTGTTATTATTGTTGGATCCAGATTTTGTGGTGATATTAGTATATGACATTGGGTGGCTTCAGATTCTGTAGAGATAATTGTACCTAATCTTTTTGTTTGAGAGAAAGAGAGGCACAGAAATGGGTTGCACATGCATATGCCTACTAATCATATGGGCACAGAATATCTTTAAGAAACCCTTTGAGATTAGCCTACCTCTTACTTTATTCCCATCCTAGTCGAATTCAGCAAATTATGTTCACTTATGTCTAAGAATCTTCACTTCGATCGACATCCCGTGCAGCTCAATTATACGTTCCCAAATCCTTTTAGATTTTTTGTAACAGCCCAAACCCACCACCGTTAACATATATTGTCCTATTTGGATTTTAAAACGCGTTTGCTAGGAGAGGTTTTCACATCCTTGTAAGGAATGCTTCATTTACCTCTCTAATCGATGTGAGATCTCACAATTTACTCCTGTTGGGGGCCTAGCGTCCTCGCTAGCACATCTCACAATCTACTCCTATTGGGAGCCTAGTCTGGTGTCTGGCGTCTAGGGCCTCTGTCTGGTTTCCTTTAAGCTCATTGCATATTGTCCTCTTTGGGCTTTCCTTTAAGGTTTGCCTCTACTAGGGAGAGATTTCCATACTCTTGTAAGGAACGCTTCGATCCCTTCTCCAACCGAACCGATGTGAGATTTTTCTCACTTTTCTTTTTCAAAAGAGGATAATATGATCCCTTCTCCAACCGATGTGAGATTTTTCTCACTTTTCTTTTTCAAAAGAGGATAATATGGCGGAGATTTAAATCACTTGAGTACTAGATTTGGTTGGATTTTAATTGATAGGATTCAAGTTTAGACTCTTATTATTATTATTTTTTTAAAAATTAAAATTAAAAATATTACTGTTAGTTTTTATATTTTGTTATCCACCTTCTGCTTTTAAAAATTTAACCCTAGATTTAAAAAGTTTATTTATTTATTTTTTAAATAGTTCTAAAAATTTTATTTTTATTTTTAAAATTTAATTAAGAATTTAAATGACTAAATTTAAATATATGGTTAGTTATTTAATTTAAAGGCTAATCATTGATTAGAAGTGATTATGTCTAAATCATGGGCCCCAAATTGAGTGATTAAAGACGTGGGACGCATATAGGCTCCATTTCAGGATTTCTTTTTTAATTTCTTTCTTTTTTAAAAAAAAAAATTGATTAAAGTTTTTCAGAAAACAATAATATGGTATTTTCCAAACGGGTTTTGGTGGACTTGGGCCTATCATGAAGCCCACGGTTAAATTTATGAAAGCCCAATTGTATTAATGGGCTTGTTTAGCAGCTAAATTTTAATGTAAAAATACGCACCTATTTATTGGGTTTGAGAAACTTATTAAATAATAACAATAATACGCAACAAAAACAATCAAATTTCTAGGAATTATTTCTTACAAACTTCAAGATTCGTCATCTTGGACTAAGCTCACAAAATCACTACACTTCTCTGCTTCAAGATCGCTCTGTTTCAGCCATTAATCTTTGCTTTTCAAGGTCAGATTATCCGATTTCGCCACTCTGAGGAGTTTTCCCCTTTTGCTCAATCGCTTCTTTATCTACGGTTCGATCCTCACTCTGTTTTTCTGGTTCTTGCTTCACTCTGGGGTTTTTGTCTCCGAGATCTTCAAGATCTTGGAAGATTTCATAAGTGCCTTCTTCTTTAATTGAACGGCCGTACATCAGGTTTTTAGGGCTGAAGGTTTTTTTCCCCGGATTTTTGGCGGTAGGGTTTTTCCGTTTTTGCCATTTTTGTTGGGTCAGTTAGAGAATCAAGGTATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAGTTCGCTTTAATACGCGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGAAGACACTTACCAAGTATTTGTAGCATTGATGGGTGTCTCTGTATGATGTTGTAAATTAGTGCAGGTAGCAGTTAGTGTTTCAATAGAACCTTAATGGCACTCTTTAAGTTAGTGATCTTGTTTGGTTAGATGCTATGCTATATGTGCCTTACAATTCATTGAAACTGTTATACGTGAAAGATAGATGGACAAATACATAGTAGTGGCAATAGAGAACATATTTCCTCAAAAACTGTCAGCTCTGTGATTTGATTTTCTTTGCCTGGCCTGTTGATGTGATCCTTTATCCTCGTATGTGTCAATGCAGTTCTATCTTTACCGAACACTGACAATTGTCGATAGAACCATTAGCCTTTCTCACTTTTATGAACAGAGTTCTTGTTTAAACCTTATTACTGAGCAATTCTGGTAGAGAGCTTATTTGTTTCCTTCTCTAACTGCATGTATCTGATTCTTCCAAGTTTTTTGGAGAAATAGATCCCATGTGACATTCCAAGATACTGTCCATACATGTATTTGAACGGAGTTTAGAGGTAACCAGTTCTTTATCTTTTTTCTTTGTATTTGTGCACTAAACTGAGATATCCTTGGCTTATACAATGAGTTTCAAGTCTTTTCCTTGTTTTTTTTTCTTCAGGTATCTTAAGTTTTTGTTTTTCTCTTATTTGGGCGATGCTTGATTCGTACTTATTATGAACTCGATGCGGTTGGCTCAAGTTATCAATCCAAAACTTGCTTATCCCATCCTGTTCTCGCCTGGTGAGCATTCTTTAAGCTTTATCTTGAAGTTCACTTGGTATCAATATTTGATAAGATTCAATGCCTTCGCTACAACTCGATGTCCATTGTTATATGGAAGTGAAACTATGAAAGTAAAAATTATTTCAAATTAAGAAGTTGTGGTCTATCTAACCCTTTTCAGTCCTTGAATGGCTTTCAGTAAACAGCCTGAGACCTAAGCAAGTTGAAACGAAGAGTGGGACTGTGAAATGGAGGAATCATTTTGAAAGCTCGATCGTTTTCATGTGAGGGGAATCGACATATTTCAAGTGTCAAGAAAGCCAAATACCTGGCGTTTCCCGTCACCGTCTTGAATTGAAGTAGCTTCGGATTCTTCTGGTCAGTATTATGAGTTACCCTTTCCTAGATTTATTGACAAGAGTTGAGAAATTCTTTCCATACCACAACTTGAGATGAGAGTCAGGGAGGCAGTGGGGGTGTAGTTTAGAGAGTAGGAGCCATAGTTCCAGTAGAATAGGAATTAGAACCATGTAGGCTGAGGGACAATTGTGGGTTGCTGCATTTTGAGCTGAGGGACTTGACTGGTGTGACACTGTGAGTCTACTTCGAGCCCGAACCTTATGTTGAATGTTTGACAGACTCCTTCTCTATAATGCACAGGCACCTCTGTAGGTAAGCGAGTCGATTCTTGTAATGGTGGCGAGGCACGAGCAAGCTGCTACTCGGGGAATTACCAGGCAAATCTTCAAACACATGTTAAGGAAACATGTAAATAAAAGTACCAAACTCTCTACCCATGTATGCTTTTCACCTTGCGAAACACATTCTTAGTTATAGCGTTCAGATTTAGCTGATAATGAATGAACGAAACTGTTGTTCTTAACTTTTGCCATCTGTTAGAATTCTCCTGTTAAGTCCTCACAATATCCCAACTTTTGTTTAAAAAAAAAGAGATCGAGCAGAGATGTCCATTTTTATTTGCGGAGACTTGCTCGGAATGGAGAAGAAATTCTTAGTTTAGACGGGAAATGGGAGGGGAAGAGTGAGAGCATTTTTTCCGGTTAGTTCGGAGACAGGATTATATTCTC

mRNA sequence

TCTATTGGCTTTTCTTTACCGTTCTTACTCTGGCGCTGGTTTTCCGACGCCCCATCTGTTTCTTCTCAGATCCCGAGCCCTGTTCGTCGTCTATTTTTTGTTCTCTCACTTAGGGTTTTGTCGTTTTGTCGCTCTTATCGAGTTCACCTTGGAGGGATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACATAGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGTGATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACCTTCCACAGTGGGTATGATTTCGAGTTAAACTGTTCTTTATATGGTACTGTCTTAGCACACGATATAGCATTGGTTACATTATCTTTTCTGATTTTAATCATGCACGAAACTCAGACGTATCTCTGGCTTGGAAATTCAGAATCGAACGAACGAGCCATGGAGATAGATCGATTCCTCTGCACATCAGACATGGCCTGGAGCCTAAGCAAGTTGGAAACCAAGGAAACTGAACCAACCTCGGAGAATCAAGGTATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAGTTCGCTTTAATACGCGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGACAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGCACCTCTGTAGGTAAGCGAGTCGATTCTTGTAATGGTGGCGAGGCACGAGCAAGCTGCTACTCGGGGAATTACCAGGCAAATCTTCAAACACATGTTAAGGAAACATGTAAATAAAAGTACCAAACTCTCTACCCATGTATGCTTTTCACCTTGCGAAACACATTCTTAGTTATAGCGTTCAGATTTAGCTGATAATGAATGAACGAAACTGTTGTTCTTAACTTTTGCCATCTGTTAGAATTCTCCTGTTAAGTCCTCACAATATCCCAACTTTTGTTTAAAAAAAAAGAGATCGAGCAGAGATGTCCATTTTTATTTGCGGAGACTTGCTCGGAATGGAGAAGAAATTCTTAGTTTAGACGGGAAATGGGAGGGGAAGAGTGAGAGCATTTTTTCCGGTTAGTTCGGAGACAGGATTATATTCTC

Coding sequence (CDS)

TCTATTGGCTTTTCTTTACCGTTCTTACTCTGGCGCTGGTTTTCCGACGCCCCATCTGTTTCTTCTCAGATCCCGAGCCCTGTTCGTCGTCTATTTTTTGTTCTCTCACTTAGGGTTTTGTCGTTTTGTCGCTCTTATCGAGTTCACCTTGGAGGGATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACATAGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGTGATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACCTTCCACAGTGGGTATGATTTCGAGTTAAACTGTTCTTTATATGGTACTGTCTTAGCACACGATATAGCATTGGTTACATTATCTTTTCTGATTTTAATCATGCACGAAACTCAGACGTATCTCTGGCTTGGAAATTCAGAATCGAACGAACGAGCCATGGAGATAGATCGATTCCTCTGCACATCAGACATGGCCTGGAGCCTAAGCAAGTTGGAAACCAAGGAAACTGAACCAACCTCGGAGAATCAAGGTATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAGTTCGCTTTAATACGCGAAGTCGTCGACCAATTCAACTACATAGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATTTGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAAGATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTCATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCAAATCTTACCAGACACCCAGGAGGACAAGGTTGCAGAAACATTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAAATATGCCGGCACCTCTGTAGGTAAGCGAGTCGATTCTTGTAATGGTGGCGAGGCACGAGCAAGCTGCTACTCGGGGAATTACCAGGCAAATCTTCAAACACATGTTAAGGAAACATGTAAATAA

Protein sequence

SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAHDIALVTLSFLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTSENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEDKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDSCNGGEARASCYSGNYQANLQTHVKETCK

Homology

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: KAG7029483.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 563/563 (100.00%), Postives = 563/563 (100.00%), Query Frame = 0


Query: 1   SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGD 60
           SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGD
Sbjct: 1   SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGD 60

Query: 61  SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDN 120
           SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDN
Sbjct: 61  SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDN 120

Query: 121 VDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDF 180
           VDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDF
Sbjct: 121 VDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDF 180

Query: 181 QKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAHDIALVTLS 240
           QKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAHDIALVTLS
Sbjct: 181 QKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAHDIALVTLS 240

Query: 241 FLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTSENQGMSTF 300
           FLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTSENQGMSTF
Sbjct: 241 FLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTSENQGMSTF 300

Query: 301 PKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRT 360
           PKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRT
Sbjct: 301 PKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRT 360

Query: 361 LKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDS 420
           LKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDS
Sbjct: 361 LKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDS 420

Query: 421 GIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQE 480
           GIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQE
Sbjct: 421 GIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQE 480

Query: 481 DKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDSCNGGE 540
           DKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDSCNGGE
Sbjct: 481 DKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDSCNGGE 540

Query: 541 ARASCYSGNYQANLQTHVKETCK 564
           ARASCYSGNYQANLQTHVKETCK
Sbjct: 541 ARASCYSGNYQANLQTHVKETCK 563

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: KAG6598550.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 998.8 bits (2581), Expect = 1.9e-287
Identity = 525/693 (75.76%), Postives = 526/693 (75.90%), Query Frame = 0


Query: 1   SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGD 60
           SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGD
Sbjct: 25  SIGFSLPFLLWRWFSDAPSVSSQIPSPVRRLFFVLSLRVLSFCRSYRVHLGGMSILPKGD 84

Query: 61  SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDN 120
           SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDN
Sbjct: 85  SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDN 144

Query: 121 VDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDF 180
           VDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDF
Sbjct: 145 VDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIELLRQCGIDF 204

Query: 181 QKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDF--------------------- 240
           QKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDF                     
Sbjct: 205 QKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFD 264

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 265 LINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRT 324

Query: 301 ---------------------ELNCSLYGTVLAHDIALVTLSFLILIMHETQTYLWLGNS 360
                                ELNCSLYGTVLAHDIALVTLSFLILIMHETQTYLWLGNS
Sbjct: 325 TFFNGSIQKYAANVSFAGMIIELNCSLYGTVLAHDIALVTLSFLILIMHETQTYLWLGNS 384

Query: 361 ESNERAMEIDRFLCTSDMAWSLSKLETKETEPTS-------------------------- 420
           ESNERAMEIDRFLCTSDMAWSLSKLETKETEPTS                          
Sbjct: 385 ESNERAMEIDRFLCTSDMAWSLSKLETKETEPTSGQIIRFRHSEEFSPFAQSLLYLRVFP 444

Query: 421 ---------ENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVV 480
                    ENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVV
Sbjct: 445 FLPFLLGQLENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVV 504

Query: 481 LRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFN 527
           LRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFN
Sbjct: 505 LRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFN 564

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: KAG7020412.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 709.9 bits (1831), Expect = 1.7e-200
Identity = 370/529 (69.94%), Postives = 408/529 (77.13%), Query Frame = 0


Query: 53  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 112
           MSILPKGDSIQIREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 113 NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 172
           NYQTLK NVD LKLIQLGLTFSDENGNLPTCGTD FCIWQFNFREFN ++DIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 173 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFE-----LNCSLYG 232
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DV WVTFHSGYDF      L C    
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 233 TVLAHDIALVTLSFLIL--IMHETQTYLWL-GNSESNERAMEIDRF-LC---TSD---MA 292
              A    L+ + F +L  I H  +    L G        +E++R  +C    SD    A
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 293 WSLSKLE-TKETEPTSENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMD 352
            +  KL  T     T +  GMS  PK ESI+IREVWNHN+EEEFAL+RE+VDQFNYIAMD
Sbjct: 241 CTFRKLRGTFFNGSTQKYAGMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMD 300

Query: 353 TEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ 412
           TEFPGVV+RPVG FKNIN++NY+TLKDNVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQ
Sbjct: 301 TEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ 360

Query: 413 FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVT 472
           FNFREFNI+ DI+A+DSI+LLR  GIDF+KN EEGIDV  F ELLMSSGIVLND+VYWVT
Sbjct: 361 FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVT 420

Query: 473 FHSGYDFGYLLKLLTCQILPDTQE------------------------------DKVAET 532
           FHSGYDFGYLLKLLTC+ LP TQ                               +K+AE 
Sbjct: 421 FHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL 480

Query: 533 LEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDS 536
           LE+ER+GVCHQAGSDSLLTACTFRKLRDTFF+GSTQKYAG   G  V++
Sbjct: 481 LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVET 529

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: KAF3665364.1 (putative CCR4-associated factor 1 -like protein 7 [Capsicum annuum])

HSP 1 Score: 604.7 bits (1558), Expect = 7.8e-169
Identity = 327/593 (55.14%), Postives = 387/593 (65.26%), Query Frame = 0


Query: 53  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 112
           MSIL K DSI IREVW DNLEEEFAL+REIVD + ++AMDTEFPGVV+RP+G FKN ND+
Sbjct: 1   MSILLKTDSIHIREVWIDNLEEEFALMREIVDDYPFVAMDTEFPGVVIRPVGNFKNSNDF 60

Query: 113 NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 172
           +YQTLKDNVDMLKLIQLGLTFSDENGNLP CGTD +CIWQFNFREFN   D+FA+DSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQLGLTFSDENGNLPKCGTDKYCIWQFNFREFNPNEDVFANDSIEL 120

Query: 173 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFE-----LNC---- 232
           LRQ GIDF+ NNE GID  RFGELLMSSG+VLN  V+W+TFHSGYDF      L C    
Sbjct: 121 LRQSGIDFKMNNERGIDAIRFGELLMSSGIVLNDSVHWITFHSGYDFGYLLKLLTCQDLP 180

Query: 233 ----------------------------SLYGTV-------------LAH----DIALVT 292
                                       SL+G +             + H    D  L  
Sbjct: 181 DTQAGFFTLINVYFPIVFDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA 240

Query: 293 LSFL----------------ILIMHETQ-----TYLWLGNSESNERAMEIDRFLCTSDMA 352
            +F                 +L+ + T+       + + +   N +   + R  C  D A
Sbjct: 241 CTFRKLKENFFSGSLEKYAGVLVFYRTRNKVIHNKVGVTSLADNAKEARVIR-ACEEDCA 300

Query: 353 WSLSKLETK-----ETEPTSENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNY 412
              S  + +       E       MS   K +SI+IREVWN NLEEEF L+RE+VD F +
Sbjct: 301 KLRSDFDLRFCRFWWREDNLIGVKMSILSKTDSIHIREVWNENLEEEFVLMREIVDDFPF 360

Query: 413 IAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKY 472
           +AMDTEFPGVV+RPVG FK+IN+FN++TLKDNVD+L LIQLGLTFS+ENGNLP CGTDKY
Sbjct: 361 VAMDTEFPGVVIRPVGNFKSINDFNFQTLKDNVDMLKLIQLGLTFSDENGNLPKCGTDKY 420

Query: 473 CIWQFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSV 532
           CIWQFNFREFN  ED++A DSI+LLR+SGIDFK N E GID  RF ELLMSSGIVLND V
Sbjct: 421 CIWQFNFREFNPNEDVFANDSIELLRESGIDFKMNNERGIDAIRFGELLMSSGIVLNDGV 480

Query: 533 YWVTFHSGYDFGYLLKLLTCQILPDTQE------------------------------DK 536
            WVTFHSGYDFGYLLKLL+ + LPDTQE                              +K
Sbjct: 481 SWVTFHSGYDFGYLLKLLSGRALPDTQEGFFTLLNLYFPVIFDIKHLMKFCNSLHGGLNK 540

[Close]

BLAST of Carg09359 vs. NCBI nr
Match: PPD90595.1 (hypothetical protein GOBAR_DD12480 [Gossypium barbadense])

HSP 1 Score: 543.1 bits (1398), Expect = 2.8e-150
Identity = 280/513 (54.58%), Postives = 330/513 (64.33%), Query Frame = 0


Query: 53  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 112
           MS+LPK DSI IREVW+DN+EEEFALIREIVD + Y+AMDTEFPG+VLRP+G FK+  DY
Sbjct: 1   MSLLPKSDSIHIREVWDDNVEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGYFKSSYDY 60

Query: 113 NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 172
           +YQTLKDNVDMLKL+QLGLTFSDE GNLPTCGTD +CIWQFNFREFN+  D+FA+DSIEL
Sbjct: 61  HYQTLKDNVDMLKLVQLGLTFSDEKGNLPTCGTDKYCIWQFNFREFNVNKDVFANDSIEL 120

Query: 173 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFELNCSLYGTVLAH 232
           LRQ GIDF+KNNE+GID  RF                                       
Sbjct: 121 LRQSGIDFKKNNEKGIDAMRF--------------------------------------- 180

Query: 233 DIALVTLSFLILIMHETQTYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTS 292
              +VT+                                                     
Sbjct: 181 ---VVTI----------------------------------------------------- 240

Query: 293 ENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKN 352
                              W+ N+EEEFALIRE+VD + Y+AMDTEFPG+VLRPVG FK+
Sbjct: 241 ------------------XWDDNVEEEFALIREIVDDYPYVAMDTEFPGIVLRPVGYFKS 300

Query: 353 INEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATD 412
             +++Y+TLKDNVD+L L+QLGLTFS+E GNLPTCGTDKYCIWQFNFREFN+ +D++A D
Sbjct: 301 SYDYHYQTLKDNVDMLKLVQLGLTFSDEKGNLPTCGTDKYCIWQFNFREFNVNKDVFAND 360

Query: 413 SIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTC 472
           SI+LLR SGIDFKKN E+GID  RF ELLMSSGIVLND+V+WVTFHSGYDFGYLLKLLTC
Sbjct: 361 SIELLRQSGIDFKKNNEKGIDAMRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTC 400

Query: 473 QILPDTQE------------------------------DKVAETLEIERVGVCHQAGSDS 532
           Q LPDTQ                               +K+AE LE+ERVG+CHQAGSDS
Sbjct: 421 QNLPDTQVGFFSLINIYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDS 400

Query: 533 LLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDS 536
           LLTACTFRKL++ FFSGS +KY+G   G  V++
Sbjct: 481 LLTACTFRKLKENFFSGSLEKYSGVLYGLGVEN 400

[Close]

BLAST of Carg09359 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 348.6 bits (893), Expect = 1.3e-94
Identity = 174/270 (64.44%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NLE E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 416
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 417 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 476
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 477 PDTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLT 536
           P+TQ                               +K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

[Close]

BLAST of Carg09359 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.3e-93
Identity = 168/269 (62.45%), Postives = 201/269 (74.72%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NL+EE  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           D+Q D                              K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

[Close]

BLAST of Carg09359 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 9.5e-93
Identity = 168/263 (63.88%), Postives = 201/263 (76.43%), Query Frame = 0


Query: 302 KAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 361
           K +SI IREVW++NL EEFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 362 KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 421
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 422 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQED 481
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q D
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 482 ------------------------------KVAETLEIERVGVCHQAGSDSLLTACTFRK 535
                                         ++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

[Close]

BLAST of Carg09359 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.2e-75
Identity = 143/263 (54.37%), Postives = 179/263 (68.06%), Query Frame = 0


Query: 304 ESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNIN------EFN 363
           ++I IREVWNHNLE+E ALI + +D F Y+AMDTEFPG+V + V    N N      E+N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 364 YRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLL 423
           Y TLK NV++L LIQLGLT S+E GNLPTCGT+K CIWQFNFREFN+  D++A DSI+LL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 424 RDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPD 483
           R S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 484 TQED------------------------------KVAETLEIERVGVCHQAGSDSLLTAC 531
              D                              K+AE L ++RVG+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

[Close]

BLAST of Carg09359 vs. ExPASy Swiss-Prot
Match: Q08BM8 (CCR4-NOT transcription complex subunit 7 OS=Danio rerio OX=7955 GN=cnot7 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.7e-60
Identity = 129/255 (50.59%), Postives = 162/255 (63.53%), Query Frame = 0


Query: 308 IREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDI 367
           I EVW  NLEEE   IR+V  +FNYIAMDTEFPGVV RP+G F++  ++ Y+ L+ NVD+
Sbjct: 12  ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71

Query: 368 LNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSGIDFKKN 427
           L +IQLGLTF  E G  P  GT     WQFNF+ FN+TED+YA DSI+LL  SGI FKK+
Sbjct: 72  LKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKH 131

Query: 428 KEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQED------ 487
           +EEGI+   F+ELLM+SG+VL + V W++FHSGYDFGYL+K+L+   LPD + D      
Sbjct: 132 EEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILR 191

Query: 488 ------------------------KVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFF 531
                                   +VAE LE+ER+G  HQAGSDSLLT   F K+R+ FF
Sbjct: 192 LFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 251

[Close]

BLAST of Carg09359 vs. ExPASy TrEMBL
Match: A0A6J1HF41 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111462886 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-124
Identity = 230/269 (85.50%), Postives = 233/269 (86.62%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MSTFPKAESIYIREVWNHNLE EFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF
Sbjct: 1   MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL
Sbjct: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP
Sbjct: 121 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           DTQE+                              KVAETLEIERVGVCHQAGSDSLLTA
Sbjct: 181 DTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. ExPASy TrEMBL
Match: A0A6J1K881 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111492035 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 4.1e-123
Identity = 227/269 (84.39%), Postives = 231/269 (85.87%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS FPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVG FKNINE+
Sbjct: 1   MSMFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGNFKNINEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL
Sbjct: 61  NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LRDSGIDFKKNKEEGIDV RFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP
Sbjct: 121 LRDSGIDFKKNKEEGIDVNRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           DTQE+                              KVAETLEIERVGVCHQAGSDSLLTA
Sbjct: 181 DTQEEFFDLIHTYFPMVYDVKHLLKFCNSVYGGLSKVAETLEIERVGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. ExPASy TrEMBL
Match: A0A6J1BRI8 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 3.4e-109
Identity = 198/269 (73.61%), Postives = 221/269 (82.16%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK ESI+IREVW+HNLEEEFAL+RE+VDQFNYIAMDTEFPGVVLRPVG FKNINE+
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LR  GIDFKKN EEGIDV RF+ELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 477 DTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLTA 536
           DTQ                               +K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. ExPASy TrEMBL
Match: A0A6J1BVW9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 4.1e-107
Identity = 194/269 (72.12%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK +SI IREVWN NLEEEFALIRE+VD+FNYIAMDTEFPGVVLRPVG FKNIN++
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFN++EDI+A+DSI+L
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LR  GIDFKKN EEGIDV RF ELLMSSG+VLND V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 477 DTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLTA 536
           DTQ                               +K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. ExPASy TrEMBL
Match: A0A6J1KLE0 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 7.1e-107
Identity = 193/269 (71.75%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS  PK ESI+IREVWNHN+EEEFAL+RE+VDQFNYIAMDTEFPGVV+RPVG FKNIN++
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           NY+TLKDNVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQFNFREFNI+ DI+A+DSI+L
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           LR  GIDF+KN EEGIDV  F ELLMSSGIVLND+VYWVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 477 DTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLTA 536
            TQ                               +K+AE LE+ER+GVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

[Close]

BLAST of Carg09359 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 348.6 bits (893), Expect = 9.4e-96
Identity = 174/270 (64.44%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NLE E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIWQFNFREFNITEDIYATDSIQ 416
           +Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIWQFNFREF++  DIYATDSI+
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 417 LLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQIL 476
           LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 477 PDTQE------------------------------DKVAETLEIERVGVCHQAGSDSLLT 536
           P+TQ                               +K+AE L++ERVG+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

[Close]

BLAST of Carg09359 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 342.8 bits (878), Expect = 5.2e-94
Identity = 168/269 (62.45%), Postives = 201/269 (74.72%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NL+EE  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           D+Q D                              K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

[Close]

BLAST of Carg09359 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 342.8 bits (878), Expect = 5.2e-94
Identity = 168/269 (62.45%), Postives = 201/269 (74.72%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NL+EE  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           D+Q D                              K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

[Close]

BLAST of Carg09359 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 6.8e-94
Identity = 168/263 (63.88%), Postives = 201/263 (76.43%), Query Frame = 0


Query: 302 KAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTL 361
           K +SI IREVW++NL EEFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 362 KDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQLLRDSG 421
           K+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFREFNI EDIYA++SI+LLR  G
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 422 IDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQED 481
           IDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q D
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 482 ------------------------------KVAETLEIERVGVCHQAGSDSLLTACTFRK 535
                                         ++AE + +ERVG+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

[Close]

BLAST of Carg09359 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 8.8e-94
Identity = 169/274 (61.68%), Postives = 203/274 (74.09%), Query Frame = 0


Query: 297 MSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEF 356
           MS F K +SI IREVWN NL+EE  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 357 NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITEDIYATDSIQL 416
           +Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQFNFREF++  DI+A DSI+L
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 417 LRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP 476
           L+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 477 DTQED------------------------------KVAETLEIERVGVCHQAGSDSLLTA 536
           D+Q D                              K+AE LE+ERVG+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 537 CTFRKLRDTFFSGSTQKYAGTSVGKRVDSCNGGE 541
           CTFRKL++ FF G   KY+G   G  V++   G+
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENEANGK 274

The following BLAST results are available for this feature:

BLAST of Carg09359 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029483.1	0.0e+00	100.00	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
KAG6598550.1	1.9e-287	75.76	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
KAG7020412.1	1.7e-200	69.94	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
KAF3665364.1	7.8e-169	55.14	putative CCR4-associated factor 1 -like protein 7 [Capsicum annuum]	[more]
PPD90595.1	2.8e-150	54.58	hypothetical protein GOBAR_DD12480 [Gossypium barbadense]	[more]

BLAST of Carg09359 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	1.3e-94	64.44	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	7.3e-93	62.45	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	9.5e-93	63.88	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9S9P2	5.2e-75	54.37	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q08BM8	3.7e-60	50.59	CCR4-NOT transcription complex subunit 7 OS=Danio rerio OX=7955 GN=cnot7 PE=2 SV...	[more]

BLAST of Carg09359 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF41	1.3e-124	85.50	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111462886 PE=3...	[more]
A0A6J1K881	4.1e-123	84.39	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111492035 PE=3 S...	[more]
A0A6J1BRI8	3.4e-109	73.61	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=...	[more]
A0A6J1BVW9	4.1e-107	72.12	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=...	[more]
A0A6J1KLE0	7.1e-107	71.75	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 S...	[more]

BLAST of Carg09359 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	9.4e-96	64.44	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	5.2e-94	62.45	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	5.2e-94	62.45	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	6.8e-94	63.88	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	8.8e-94	61.68	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 67..188 e-value: 5.5E-11 score: 42.3
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 311..432 e-value: 4.7E-12 score: 45.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 295..480 e-value: 2.6E-68 score: 232.0 coord: 52..234 e-value: 2.5E-61 score: 209.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 481..530 e-value: 9.9E-9 score: 36.7
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 53..221 coord: 481..535 coord: 297..481
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 53..221 coord: 481..535 coord: 297..481
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 307..522
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 58..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09359-RA	Carg09359-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity