Carg09284 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg09284
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr05: 2142415 .. 2142866 (+)
RNA-Seq ExpressionCarg09284
SyntenyCarg09284
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGTGAAGCCAACGACACCAGGTTCTCATCGACGCTAAAACTTATCGTTGCTCGAGCTATCTTGATCATCATCTACCTTGTTTGCAGGTTGTTTGTTGCAATTGTTCTTAAACTGAAGTCTTGGATTCTTGGGGGGTGATCGGCAGTGAAGCCAATGGCACTAGGTTCATATCGATGATAAGTTTATCGTGACTCGTGTTATCTTGATCACCATCTACCTTGTTTGTGAGTTGTTTGTTGTCAATTGTTCTTGAACTAAAGTCTTGGGTTCTTGGGGGTGATCGGCAGTGAAGCCAATTACACTAGGTTCACATCGATGATAAGTTTATCATGGCTCGAGTTGCCTTGATCACCATCTACCTTGTTTGCAGGTTGTTTGTTGCAATTGTTCTTAAACTCAAGTCTTGGATTCTTGGGGGTGATCGGCAAGGAAGCCAACGACACTAG

mRNA sequence

ATGGGCAGTGAAGCCAACGACACCAGGTTCTCATCGACGCTAAAACTTATCGTTGCTCGAGCTATCTTGATCATCATCTACCTTGTTTGCAGGTTGTTTGTTGCAATTGTTCTTAAACTGAAGTCTTGGATTCTTGGGGGGTTGTTTGTTGCAATTGTTCTTAAACTCAAGTCTTGGATTCTTGGGGGTGATCGGCAAGGAAGCCAACGACACTAG

Coding sequence (CDS)

ATGGGCAGTGAAGCCAACGACACCAGGTTCTCATCGACGCTAAAACTTATCGTTGCTCGAGCTATCTTGATCATCATCTACCTTGTTTGCAGGTTGTTTGTTGCAATTGTTCTTAAACTGAAGTCTTGGATTCTTGGGGGGTTGTTTGTTGCAATTGTTCTTAAACTCAAGTCTTGGATTCTTGGGGGTGATCGGCAAGGAAGCCAACGACACTAG

Protein sequence

MGSEANDTRFSSTLKLIVARAILIIIYLVCRLFVAIVLKLKSWILGGLFVAIVLKLKSWILGGDRQGSQRH
Homology
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BLAST of Carg09284 vs. NCBI nr
Match: KAG7029558.1 (hypothetical protein SDJN02_07897, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.1 bits (331), Expect = 1.9e-27
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MGSEANDTRFSSTLKLIVARAILIIIYLVCRLFVAIVLKLKSWILGGLFVAIVLKLKSWI 60
          MGSEANDTRFSSTLKLIVARAILIIIYLVCRLFVAIVLKLKSWILGGLFVAIVLKLKSWI
Sbjct: 1  MGSEANDTRFSSTLKLIVARAILIIIYLVCRLFVAIVLKLKSWILGGLFVAIVLKLKSWI 60

Query: 61 LGGDRQGSQRH 72
          LGGDRQGSQRH
Sbjct: 61 LGGDRQGSQRH 71

The following BLAST results are available for this feature:
BLAST of Carg09284 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029558.11.9e-27100.00hypothetical protein SDJN02_07897, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg09284 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg09284 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg09284 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09284-RACarg09284-RAmRNA