Carg09223 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09223
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Fn3_like domain-containing protein
Location	Carg_Chr05: 2488587 .. 2489045 (-)
RNA-Seq Expression	Carg09223
Synteny	Carg09223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCCTCCTCCTCCTCCTTCCCTAGGAGAATGGAACTCCAAAAACTCCTTCTCTCCGCCGCCGTTTTCTCTGCCCTCCTTTCCCTCTCCGCCGTGCAAACGGCGGCTCAGCCGCGGTACGCCTGCGACACTTCCAACCCACTCACGAAAACTCTCCCATTCTGCAAAACCTCTATGCCGATGGAGGAAAGAGTCCGCGATGTGGTCTCTCGACTCACATTGGACGAGAAGATCCTGCAGCTCGTCAACGATGCTCCGGCGATCCCCCGTCTCGGCATTCCCGCCCACGAGTGGTGGTCGGAGGCCCTCCATGGCCTCGCCGATTTCGGCTACGGCATCAGCTTCAGGGGTACCATCCCCGCCGCCACCTTGTTCCCCCAGGTCATTCTTACTGCTGCTACCTTCGATGCCAAGCTCTGGTACCAGATCGGACAGGTCGAATCAAATCCCTAA

mRNA sequence

ATGGCTTCCTCCTCCTCCTCCTCCTTCCCTAGGAGAATGGAACTCCAAAAACTCCTTCTCTCCGCCGCCGTTTTCTCTGCCCTCCTTTCCCTCTCCGCCGTGCAAACGGCGGCTCAGCCGCGGTACGCCTGCGACACTTCCAACCCACTCACGAAAACTCTCCCATTCTGCAAAACCTCTATGCCGATGGAGGAAAGAGTCCGCGATGTGGTCTCTCGACTCACATTGGACGAGAAGATCCTGCAGCTCGTCAACGATGCTCCGGCGATCCCCCGTCTCGGCATTCCCGCCCACGAGTGGTGGTCGGAGGCCCTCCATGGCCTCGCCGATTTCGGCTACGGCATCAGCTTCAGGGGTACCATCCCCGCCGCCACCTTGTTCCCCCAGGTCATTCTTACTGCTGCTACCTTCGATGCCAAGCTCTGGTACCAGATCGGACAGGTCGAATCAAATCCCTAA

Coding sequence (CDS)

ATGGCTTCCTCCTCCTCCTCCTCCTTCCCTAGGAGAATGGAACTCCAAAAACTCCTTCTCTCCGCCGCCGTTTTCTCTGCCCTCCTTTCCCTCTCCGCCGTGCAAACGGCGGCTCAGCCGCGGTACGCCTGCGACACTTCCAACCCACTCACGAAAACTCTCCCATTCTGCAAAACCTCTATGCCGATGGAGGAAAGAGTCCGCGATGTGGTCTCTCGACTCACATTGGACGAGAAGATCCTGCAGCTCGTCAACGATGCTCCGGCGATCCCCCGTCTCGGCATTCCCGCCCACGAGTGGTGGTCGGAGGCCCTCCATGGCCTCGCCGATTTCGGCTACGGCATCAGCTTCAGGGGTACCATCCCCGCCGCCACCTTGTTCCCCCAGGTCATTCTTACTGCTGCTACCTTCGATGCCAAGCTCTGGTACCAGATCGGACAGGTCGAATCAAATCCCTAA

Protein sequence

MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQVESNP

Homology

[Close]

BLAST of Carg09223 vs. NCBI nr
Match: KAG7029617.1 (putative beta-D-xylosidase 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS 60
           MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS
Sbjct: 1   MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS 60

Query: 61  MPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT 120
           MPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT
Sbjct: 61  MPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT 120

Query: 121 IPAATLFPQVILTAATFDAKLWYQIGQVESNP 153
           IPAATLFPQVILTAATFDAKLWYQIGQVESNP
Sbjct: 121 IPAATLFPQVILTAATFDAKLWYQIGQVESNP 152

[Close]

BLAST of Carg09223 vs. NCBI nr
Match: KAG6598672.1 (putative beta-D-xylosidase 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.4 bits (760), Expect = 7.2e-77
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS 60
           MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS
Sbjct: 1   MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS 60

Query: 61  MPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT 120
           MPMEERVRDVVSRL LDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT
Sbjct: 61  MPMEERVRDVVSRLALDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT 120

Query: 121 IPAATLFPQVILTAATFDAKLWYQIGQVESNP 153
           IPAATLFPQVILTAATFDAKLWYQIGQVESNP
Sbjct: 121 IPAATLFPQVILTAATFDAKLWYQIGQVESNP 152

[Close]

BLAST of Carg09223 vs. NCBI nr
Match: XP_022961999.1 (probable beta-D-xylosidase 7 isoform X2 [Cucurbita moschata])

HSP 1 Score: 223.4 bits (568), Expect = 1.3e-54
Identity = 112/135 (82.96%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 13  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVS 72
           MELQKLLLSAAVFSALLSLS+VQT+AQPRYACDTSNPLT TLPFC+TS+ +  R RD+VS
Sbjct: 1   MELQKLLLSAAVFSALLSLSSVQTSAQPRYACDTSNPLTNTLPFCRTSLSINLRARDLVS 60

Query: 73  RLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVIL 132
           RLTLDEKILQLVN APAIPRLGIPA+EWWSEALHG+A  GYGI   GTI AAT FPQVIL
Sbjct: 61  RLTLDEKILQLVNTAPAIPRLGIPAYEWWSEALHGVAHVGYGIRLNGTISAATSFPQVIL 120

Query: 133 TAATFDAKLWYQIGQ 148
           TAA+FDA LWYQIGQ
Sbjct: 121 TAASFDANLWYQIGQ 135

[Close]

BLAST of Carg09223 vs. NCBI nr
Match: XP_038884772.1 (probable beta-D-xylosidase 7 [Benincasa hispida])

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-53
Identity = 107/145 (73.79%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 3   SSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMP 62
           +SS   FP +++LQKLLLSAAVFSALLSL    +++QP YACD+SNP+TKTLPFC+TS+P
Sbjct: 2   ASSFLFFPHKLKLQKLLLSAAVFSALLSLIVADSSSQPPYACDSSNPVTKTLPFCRTSLP 61

Query: 63  MEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIP 122
           +++R RD+VSRLTLDEK+LQLVN APAIPRLGIPA+EWWSEALHG+A  GYGI   GTIP
Sbjct: 62  IKQRARDLVSRLTLDEKVLQLVNTAPAIPRLGIPAYEWWSEALHGVAHVGYGIRLNGTIP 121

Query: 123 AATLFPQVILTAATFDAKLWYQIGQ 148
           AAT FPQVILTAA+FD  LWYQIGQ
Sbjct: 122 AATSFPQVILTAASFDENLWYQIGQ 146

[Close]

BLAST of Carg09223 vs. NCBI nr
Match: XP_023546008.1 (probable beta-D-xylosidase 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.2 bits (557), Expect = 2.5e-53
Identity = 111/147 (75.51%), Postives = 127/147 (86.39%), Query Frame = 0


Query: 1   MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS 60
           MASSSSSSFP +M+LQ+LLLSAAVF +LLSL A ++++QP YACD+SN LT TLPFC+TS
Sbjct: 1   MASSSSSSFPPKMKLQQLLLSAAVFFSLLSLIAAESSSQPPYACDSSNSLTNTLPFCRTS 60

Query: 61  MPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT 120
           + +  R RD+VSRLTLDEKILQLVN APAIPRLGIPA+EWWSEALHG+A  GYGI   GT
Sbjct: 61  LSINLRARDLVSRLTLDEKILQLVNTAPAIPRLGIPAYEWWSEALHGVAHVGYGIRLNGT 120

Query: 121 IPAATLFPQVILTAATFDAKLWYQIGQ 148
           I AAT FPQVILTAA+FDA LWYQIGQ
Sbjct: 121 ISAATSFPQVILTAASFDANLWYQIGQ 147

[Close]

BLAST of Carg09223 vs. ExPASy Swiss-Prot
Match: Q9SGZ5 (Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 4.5e-37
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 37  AAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIP 96
           +A P ++CD SNP TK   FC+T +P+ +R RD+VSRLT+DEKI QLVN AP IPRLG+P
Sbjct: 19  SAPPPHSCDPSNPTTKLYQFCRTDLPIGKRARDLVSRLTIDEKISQLVNTAPGIPRLGVP 78

Query: 97  AHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQV 149
           A+EWWSEALHG+A  G GI F GT+ AAT FPQVILTAA+FD+  W++I QV
Sbjct: 79  AYEWWSEALHGVAYAGPGIRFNGTVKAATSFPQVILTAASFDSYEWFRIAQV 130

[Close]

BLAST of Carg09223 vs. ExPASy Swiss-Prot
Match: Q94KD8 (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-33
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 0


Query: 13  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVS 72
           M L K+   A +   L+S S+V   ++  +ACDT +  T TL FC+ S+P+ ERVRD++ 
Sbjct: 1   MILHKMAFLAVILFFLISSSSVCVHSRETFACDTKDAATATLRFCQLSVPIPERVRDLIG 60

Query: 73  RLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVIL 132
           RLTL EK+  L N A AIPRLGI  +EWWSEALHG+++ G G  F G  PAAT FPQVI 
Sbjct: 61  RLTLAEKVSLLGNTAAAIPRLGIKGYEWWSEALHGVSNVGPGTKFGGVYPAATSFPQVIT 120

Query: 133 TAATFDAKLWYQIGQVESN 152
           T A+F+A LW  IG+V SN
Sbjct: 121 TVASFNASLWESIGRVVSN 139

[Close]

BLAST of Carg09223 vs. ExPASy Swiss-Prot
Match: Q9FGY1 (Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32
Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 28  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLTLDEKILQLVNDA 87
           LL L     + +P +ACD +N LT+TL FC+ ++P+  RV+D++ RLTL EKI  LVN+A
Sbjct: 21  LLCLVHSSESLRPLFACDPANGLTRTLRFCRANVPIHVRVQDLLGRLTLQEKIRNLVNNA 80

Query: 88  PAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ 147
            A+PRLGI  +EWWSEALHG++D G G  F G  P AT FPQVI TAA+F+  LW +IG+
Sbjct: 81  AAVPRLGIGGYEWWSEALHGISDVGPGAKFGGAFPGATSFPQVITTAASFNQSLWEEIGR 140

Query: 148 VESN 152
           V S+
Sbjct: 141 VVSD 144

[Close]

BLAST of Carg09223 vs. ExPASy Swiss-Prot
Match: Q9LJN4 (Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-31
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 28  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLTLDEKILQLVNDA 87
           +++L +    +Q  +ACD S P T    FC  S+  E R +D+VSRL+L EK+ QLVN A
Sbjct: 13  IIALVSSLCESQKNFACDISAPATAKYGFCNVSLSYEARAKDLVSRLSLKEKVQQLVNKA 72

Query: 88  PAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ 147
             +PRLG+P +EWWSEALHG++D G G+ F GT+P AT FP  ILTAA+F+  LW ++G+
Sbjct: 73  TGVPRLGVPPYEWWSEALHGVSDVGPGVHFNGTVPGATSFPATILTAASFNTSLWLKMGE 132

Query: 148 VES 151
           V S
Sbjct: 133 VVS 135

[Close]

BLAST of Carg09223 vs. ExPASy Swiss-Prot
Match: Q9LXA8 (Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana OX=3702 GN=BXL6 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.9e-28
Identity = 64/134 (47.76%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 13  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVS 72
           M LQ  L+S   F++ ++ +     + P++ C    P   + PFC  S+ +++R   +VS
Sbjct: 1   MNLQLTLISLLFFTSAIAETFKNLDSHPQFPC--KPPHFSSYPFCNVSLSIKQRAISLVS 60

Query: 73  RLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVIL 132
            L L EKI QL N A ++PRLGIP +EWWSE+LHGLAD G G+SF G+I AAT FPQVI+
Sbjct: 61  LLMLPEKIGQLSNTAASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSFPQVIV 120

Query: 133 TAATFDAKLWYQIG 147
           +AA+F+  LWY+IG
Sbjct: 121 SAASFNRTLWYEIG 132

[Close]

BLAST of Carg09223 vs. ExPASy TrEMBL
Match: A0A6J1HFL6 (probable beta-D-xylosidase 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462601 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.4e-55
Identity = 112/135 (82.96%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 13  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVS 72
           MELQKLLLSAAVFSALLSLS+VQT+AQPRYACDTSNPLT TLPFC+TS+ +  R RD+VS
Sbjct: 1   MELQKLLLSAAVFSALLSLSSVQTSAQPRYACDTSNPLTNTLPFCRTSLSINLRARDLVS 60

Query: 73  RLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVIL 132
           RLTLDEKILQLVN APAIPRLGIPA+EWWSEALHG+A  GYGI   GTI AAT FPQVIL
Sbjct: 61  RLTLDEKILQLVNTAPAIPRLGIPAYEWWSEALHGVAHVGYGIRLNGTISAATSFPQVIL 120

Query: 133 TAATFDAKLWYQIGQ 148
           TAA+FDA LWYQIGQ
Sbjct: 121 TAASFDANLWYQIGQ 135

[Close]

BLAST of Carg09223 vs. ExPASy TrEMBL
Match: A0A6J1KCT6 (probable beta-D-xylosidase 7 OS=Cucurbita maxima OX=3661 GN=LOC111492102 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 107/145 (73.79%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 3   SSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMP 62
           +SSSS FP +M+LQ+LLLSAAVF +LLSL A ++++QP YACD+SN LT TLPFC+TS+ 
Sbjct: 2   ASSSSFFPPKMKLQQLLLSAAVFFSLLSLIAAESSSQPPYACDSSNSLTNTLPFCRTSLS 61

Query: 63  MEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIP 122
           +  R RD+VSRLTLDEK+LQLVN APAIPRLGIPA+EWWSEALHG+A  GYGI   GTIP
Sbjct: 62  INLRARDLVSRLTLDEKVLQLVNTAPAIPRLGIPAYEWWSEALHGVAHVGYGIRLNGTIP 121

Query: 123 AATLFPQVILTAATFDAKLWYQIGQ 148
           AAT FPQVILTAA+FDA LWYQIGQ
Sbjct: 122 AATSFPQVILTAASFDANLWYQIGQ 146

[Close]

BLAST of Carg09223 vs. ExPASy TrEMBL
Match: A0A6J1HDG0 (probable beta-D-xylosidase 7 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462601 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.6e-50
Identity = 107/146 (73.29%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 2   ASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSM 61
           +SSSSSSFP +M+LQ+LLLSAAVF +LLSL A ++++QP YACD+SN    TLPFC+TS+
Sbjct: 3   SSSSSSSFPPKMKLQQLLLSAAVFFSLLSLIAAESSSQPPYACDSSN----TLPFCRTSL 62

Query: 62  PMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTI 121
            +  R RD+VSRLTLDEKILQLVN APAIPRLGIPA+EWWSEALHG+A  GYGI   GTI
Sbjct: 63  SINLRARDLVSRLTLDEKILQLVNTAPAIPRLGIPAYEWWSEALHGVAHVGYGIRLNGTI 122

Query: 122 PAATLFPQVILTAATFDAKLWYQIGQ 148
            AAT FPQVILTAA+FDA LWYQIGQ
Sbjct: 123 SAATSFPQVILTAASFDANLWYQIGQ 144

[Close]

BLAST of Carg09223 vs. ExPASy TrEMBL
Match: A0A5A7VG12 (Putative beta-D-xylosidase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001370 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49
Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 1   MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS 60
           MAS     FP +++LQ LLLSA    A LSL    +++QP YACD+SNPLTKTLPFC+TS
Sbjct: 1   MASFFFFFFPHKIKLQTLLLSA----AFLSLIVAGSSSQPPYACDSSNPLTKTLPFCRTS 60

Query: 61  MPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT 120
           +P++ R RD+VSRLTLDEK+LQLVN APAIPRLGIPA+EWWSEALHG+AD GYGI   GT
Sbjct: 61  LPIKLRARDLVSRLTLDEKVLQLVNTAPAIPRLGIPAYEWWSEALHGVADVGYGIRLNGT 120

Query: 121 IPAATLFPQVILTAATFDAKLWYQIGQ 148
           IPAAT FPQVILTAA+FD  LWYQIGQ
Sbjct: 121 IPAATSFPQVILTAASFDENLWYQIGQ 143

[Close]

BLAST of Carg09223 vs. ExPASy TrEMBL
Match: A0A1S3BD89 (probable beta-D-xylosidase 7 OS=Cucumis melo OX=3656 GN=LOC103488410 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49
Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 1   MASSSSSSFPRRMELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTS 60
           MAS     FP +++LQ LLLSA    A LSL    +++QP YACD+SNPLTKTLPFC+TS
Sbjct: 1   MASFFFFFFPHKIKLQTLLLSA----AFLSLIVAGSSSQPPYACDSSNPLTKTLPFCRTS 60

Query: 61  MPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGT 120
           +P++ R RD+VSRLTLDEK+LQLVN APAIPRLGIPA+EWWSEALHG+AD GYGI   GT
Sbjct: 61  LPIKLRARDLVSRLTLDEKVLQLVNTAPAIPRLGIPAYEWWSEALHGVADVGYGIRLNGT 120

Query: 121 IPAATLFPQVILTAATFDAKLWYQIGQ 148
           IPAAT FPQVILTAA+FD  LWYQIGQ
Sbjct: 121 IPAATSFPQVILTAASFDENLWYQIGQ 143

[Close]

BLAST of Carg09223 vs. TAIR 10
Match: AT1G78060.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 155.6 bits (392), Expect = 3.2e-38
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 37  AAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLTLDEKILQLVNDAPAIPRLGIP 96
           +A P ++CD SNP TK   FC+T +P+ +R RD+VSRLT+DEKI QLVN AP IPRLG+P
Sbjct: 19  SAPPPHSCDPSNPTTKLYQFCRTDLPIGKRARDLVSRLTIDEKISQLVNTAPGIPRLGVP 78

Query: 97  AHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQV 149
           A+EWWSEALHG+A  G GI F GT+ AAT FPQVILTAA+FD+  W++I QV
Sbjct: 79  AYEWWSEALHGVAYAGPGIRFNGTVKAATSFPQVILTAASFDSYEWFRIAQV 130

[Close]

BLAST of Carg09223 vs. TAIR 10
Match: AT1G02640.1 (beta-xylosidase 2 )

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-34
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 0


Query: 13  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVS 72
           M L K+   A +   L+S S+V   ++  +ACDT +  T TL FC+ S+P+ ERVRD++ 
Sbjct: 1   MILHKMAFLAVILFFLISSSSVCVHSRETFACDTKDAATATLRFCQLSVPIPERVRDLIG 60

Query: 73  RLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVIL 132
           RLTL EK+  L N A AIPRLGI  +EWWSEALHG+++ G G  F G  PAAT FPQVI 
Sbjct: 61  RLTLAEKVSLLGNTAAAIPRLGIKGYEWWSEALHGVSNVGPGTKFGGVYPAATSFPQVIT 120

Query: 133 TAATFDAKLWYQIGQVESN 152
           T A+F+A LW  IG+V SN
Sbjct: 121 TVASFNASLWESIGRVVSN 139

[Close]

BLAST of Carg09223 vs. TAIR 10
Match: AT5G49360.1 (beta-xylosidase 1 )

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-34
Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 28  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLTLDEKILQLVNDA 87
           LL L     + +P +ACD +N LT+TL FC+ ++P+  RV+D++ RLTL EKI  LVN+A
Sbjct: 21  LLCLVHSSESLRPLFACDPANGLTRTLRFCRANVPIHVRVQDLLGRLTLQEKIRNLVNNA 80

Query: 88  PAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ 147
            A+PRLGI  +EWWSEALHG++D G G  F G  P AT FPQVI TAA+F+  LW +IG+
Sbjct: 81  AAVPRLGIGGYEWWSEALHGISDVGPGAKFGGAFPGATSFPQVITTAASFNQSLWEEIGR 140

Query: 148 VESN 152
           V S+
Sbjct: 141 VVSD 144

[Close]

BLAST of Carg09223 vs. TAIR 10
Match: AT3G19620.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-32
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 28  LLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVSRLTLDEKILQLVNDA 87
           +++L +    +Q  +ACD S P T    FC  S+  E R +D+VSRL+L EK+ QLVN A
Sbjct: 13  IIALVSSLCESQKNFACDISAPATAKYGFCNVSLSYEARAKDLVSRLSLKEKVQQLVNKA 72

Query: 88  PAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVILTAATFDAKLWYQIGQ 147
             +PRLG+P +EWWSEALHG++D G G+ F GT+P AT FP  ILTAA+F+  LW ++G+
Sbjct: 73  TGVPRLGVPPYEWWSEALHGVSDVGPGVHFNGTVPGATSFPATILTAASFNTSLWLKMGE 132

Query: 148 VES 151
           V S
Sbjct: 133 VVS 135

[Close]

BLAST of Carg09223 vs. TAIR 10
Match: AT5G10560.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-29
Identity = 64/134 (47.76%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 13  MELQKLLLSAAVFSALLSLSAVQTAAQPRYACDTSNPLTKTLPFCKTSMPMEERVRDVVS 72
           M LQ  L+S   F++ ++ +     + P++ C    P   + PFC  S+ +++R   +VS
Sbjct: 1   MNLQLTLISLLFFTSAIAETFKNLDSHPQFPC--KPPHFSSYPFCNVSLSIKQRAISLVS 60

Query: 73  RLTLDEKILQLVNDAPAIPRLGIPAHEWWSEALHGLADFGYGISFRGTIPAATLFPQVIL 132
            L L EKI QL N A ++PRLGIP +EWWSE+LHGLAD G G+SF G+I AAT FPQVI+
Sbjct: 61  LLMLPEKIGQLSNTAASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSFPQVIV 120

Query: 133 TAATFDAKLWYQIG 147
           +AA+F+  LWY+IG
Sbjct: 121 SAASFNRTLWYEIG 132

The following BLAST results are available for this feature:

BLAST of Carg09223 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029617.1	1.9e-77	100.00	putative beta-D-xylosidase 7, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6598672.1	7.2e-77	99.34	putative beta-D-xylosidase 7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022961999.1	1.3e-54	82.96	probable beta-D-xylosidase 7 isoform X2 [Cucurbita moschata]	[more]
XP_038884772.1	1.5e-53	73.79	probable beta-D-xylosidase 7 [Benincasa hispida]	[more]
XP_023546008.1	2.5e-53	75.51	probable beta-D-xylosidase 7 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg09223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGZ5	4.5e-37	64.29	Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2	[more]
Q94KD8	2.3e-33	52.52	Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1	[more]
Q9FGY1	1.1e-32	54.03	Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1	[more]
Q9LJN4	2.1e-31	50.41	Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2	[more]
Q9LXA8	4.9e-28	47.76	Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana OX=3702 GN=BXL6 PE=2 SV=1	[more]

BLAST of Carg09223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFL6	6.4e-55	82.96	probable beta-D-xylosidase 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KCT6	2.3e-52	73.79	probable beta-D-xylosidase 7 OS=Cucurbita maxima OX=3661 GN=LOC111492102 PE=3 SV...	[more]
A0A6J1HDG0	3.6e-50	73.29	probable beta-D-xylosidase 7 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5A7VG12	3.1e-49	70.75	Putative beta-D-xylosidase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BD89	3.1e-49	70.75	probable beta-D-xylosidase 7 OS=Cucumis melo OX=3656 GN=LOC103488410 PE=3 SV=1	[more]

BLAST of Carg09223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78060.1	3.2e-38	64.29	Glycosyl hydrolase family protein	[more]
AT1G02640.1	1.6e-34	52.52	beta-xylosidase 2	[more]
AT5G49360.1	8.1e-34	54.03	beta-xylosidase 1	[more]
AT3G19620.1	1.5e-32	50.41	Glycosyl hydrolase family protein	[more]
AT5G10560.1	3.5e-29	47.76	Glycosyl hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily	GENE3D	3.20.20.300		coord: 46..151 e-value: 4.2E-20 score: 74.0
None	No IPR available	PANTHER	PTHR42721:SF19	BETA-D-XYLOSIDASE 7-RELATED	coord: 25..148
IPR044993	Beta-D-xylosidase	PANTHER	PTHR42721	SUGAR HYDROLASE-RELATED	coord: 25..148
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 54..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09223-RA	Carg09223-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031222	arabinan catabolic process
biological_process	GO:0045493	xylan catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0046556	alpha-L-arabinofuranosidase activity
molecular_function	GO:0009044	xylan 1,4-beta-xylosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds