Carg09072 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGATCGATAGCTTCTACACCCAGAGACCATGCAATCTGGAGTCGTCTTCTACACCCAGACGCTTTCAGTTGAAATCGATATCGAAATCGAAATTTCCTTCGGTTCCACAGACCAAATCTACGAAGCTTCGCATTGAATTTCATTCGAAGGCACACCATAGCCTCGATAAGCTCCCGTTTATGCGAGTTCGCTGCTCCGTCTCCGCCCTCTTTCACTGGTTAGTACCACTGTGCAAGTTATTTCGCTTTATATCTCTCTTGTTCTCTCCCTCTTTTTATGTATTTTCCATCAAATGTTGAATTGATTGTGAACTTTACCTTTGTGTATAGAAACTGATGTAGAAGCATTATGTAAATCGTTGTTATCAGTGACTGATAATGGCTTTCAATTTAGGGACTCATGGAGTTCTATGTTGTCGAATTGCTTAGACATTTCTTGGAGATGGGCTACTCAAATCACCTCCTATTACTTGTTCTTTCTTTGCTTAGTTGCACAAGCCCACGATTATCCATCTCCTTCTGTTAGATATCCTTGTGAAGATGTTAACGAGTATTATGCTAATGTAGCACAGTTAACAGGTGAACCTCTCAAACGTAAGCTAAATTCAATCATTGCTGCACATCATTCCTTGTCCTATAAAGAGGTACCTTCTAGTTTTTATTATGAACTTTTAGCTATAGCTTGACTGCTTCTTCTAGCTCGTTTAATACGTCGACTACGCATCTATTGCTCGGCTAAGATGATGTAATGAACAGGTCTGGGATGCCATCAAGATTCTTGATGCTGCTGATGTGGACAAACCAGAAGCCTCATCAGAAATGTAATGCTCAATTTTATTTGGTTTGTAATTTCCATTCATACAAATCTAATTATTTCATGGGAATGCAACTTTTTCCGATTTTGGTGAAGCGGGCCTGTTAGTTAATTGCACCTTAGTATTCTACATAGTTAGTGAATTCTACCAGAATATTTATTGTCAACTTATACCACAGAGTGGAGATTTACTCGCAAAGGATTGTGTCAAAGTCGCTAGCAGGGAAGCCTGAGGGTTGGAACAGTAAGTTCTTGAGCAAACTAGTTTTTGACCTCAGGCTCTAAAGGTTTCAGTTTAAATAGCTTTCATGGGAATTTTAGTAAAAGATTTGTATGACCATTACATACTTTATTGTAAGAGATAGAACGTTCAGTATGTGGTATAGCAAAACAAACTAATAGCAGCACTCATATATGAAGTGTTATTTCAGGGGAGCATTTGTGGCCTCGCTCTTATGGGCTCAGAAGAGGTCCATCCCTGACCGATTTGCAGAATATCCATCCAGCAGATGCAAATGGTAACTTGAGAATTTTCCATTCTAGCGACAAGTTGATGAAAGTAGTTTGATATTAGTAACTAATTGAAATTTGTGCAGTGAATTCCTCCCGGGGGAACAAATATTTTGGAGAATGCCAAGTTAACTCCCCAGAATGTATGAAGCCAGCCTACAAAGAAGCTGCTTATGATACCGAAACAGACAAGGAAAAATGGGCACCACCTAAGCGCGTAAGAATTTTGTTAAATTTTTGGCAATCTTGAACTTAAGATTCTTTCTTCCACAGGAAAAACGATTACGGATTCAAAGTCAGAAACATTGCAATGGTTAAATATTGAAGGCAGTAATTACTAGAATCATATTTTTCTTATATATCATGATTTTCGTATCTGCAATGGTTTTCACTGGCAGGTTAGAGGAGATATAGCACGGGCAGTAATGTATATGGCAGTCTGTTATGGGTTCCACCTTTCTGATTCTCCAGACAAGGGTAAGTTTCAAGTAAAAAAAATGCAGTAATAGCCGTCCAATGCAATCATTTATATACATTTAAAAAAATGCATTGGTGCATTTACACAGATATTCTTTAGCCTCATGCAGTAGTTTAATAACTTTTTCCTTTCACCGTCTTTAAATTTTGGAAATTACGATAAGCAGAGCAGTGTTTGAAGAGAGGGAAATTCTTTTTGTAGTGCTAGGATTTCAAGTTATATTAAGTGATAGTCCTGGGTTTAAGGTAGTGCATGGAAAACATAATAAAATATGATGTTGTCATTCAGGATTGCTGTGTTTTCGCTTCTGTGGATCAGTGGGATGGGGCCTGAAACTATAATAATCCAGGAACAAAAATTTGTATTTTTTTTCTTCTTAATTTACATAAAAATGGTTGTTCATATTTTAAAAGATTCATCCATCTTCTGTAGGAAATAAGGAGATGGGCTTAATTTCTACATTGTTAAAGTGGAATAAGAGTGATCCGCCGTCAAGAGAAGAGAAGTTGAGAAATGAAAGAATATGCAAGTTTTATCAGCACAATAGAAATCCGTTTGTTGATCATTCAGAATACGCTGATCTAATTTGGAAGTAAATTTCTCCAACTTGTGAAAGCTCAAAGTTTCTTAAGGGGAACAATGACCAATGTCAGTCACAACCACAAGGTAAGAGTTACTTAGAAGGAGGTATTCTTTTGTCCTAAGCGATCTTCATTTTTCTCAACCTTGGAAGAGGAAACCGTGAAGGTAGCAATGCATAATATGAGATTTTGGCTTGTATTTATTCATGATGAAACATGTACAAGATAATGTTTCATGGAAGTTATAGTTCTTAATGAATACCCAAAAGCTTTGACATATTAGGCTAGGCCTGGGGTAGTTTTGAACTTGTTAATATATCCCGTTATTTCTTCGGGTGAGTGGGTTTAGGTATTCATTTAGTTCTAATTGATGGTGGGAGATAATACTACAAGAATTAGAGTTTAGAACTTCTACTATGATATTATCATGTCAAATTGTCTTTAAACTCAAAAGCTTAAGTTGTTAAGATATGAAAAAAAAATTTAGAATAATGCACTTTCTCAAGATGGAATGTAAGTCGATGTAGTAAGCATTTTGTTATTACACTTCGATGACATGTAAACAATGCAGATTAGCAGAAACAAAGTGAAATTACATTAATCTTTTTGGTGAGAATAATCTCTATTTAACTTACTATAATTGTTCTGTGAAAATTGAGACACCAATGTCCTGTTGACATAAAGAATGAAGACCACGTTAAAACTATATGATAATTAATTTAATTCTCCTGCAATGTTTAAAAAAATGCAATGGCTAGGTAGTCAAAGAGCCAGTTTCTTTTCCATGACAAAGTAGGCATTGGCGTTGCCTTCACTGTAATGGAGAAGGAATGGTATCTGCATGATTAGTCAACGAGAGATCTCTGTTCCTTTTAGGCCTTCTTTCCAAGAAGGCTGGTTTCAAAGGTGTTTGAATGATTTCAAATTTGTATGTTAACATGGCAACAATCTCAGACATTGCAGGTCTCAGATCGCCATGAGGCTGAAGGCATAA ATGACGATCGATAGCTTCTACACCCAGAGACCATGCAATCTGGAGTCGTCTTCTACACCCAGACGCTTTCAGTTGAAATCGATATCGAAATCGAAATTTCCTTCGGTTCCACAGACCAAATCTACGAAGCTTCGCATTGAATTTCATTCGAAGGCACACCATAGCCTCGATAAGCTCCCGTTTATGCGAGTTCGCTGCTCCGTCTCCGCCCTCTTTCACTGGGACTCATGGAGTTCTATGTTGTCGAATTGCTTAGACATTTCTTGGAGATGGGCTACTCAAATCACCTCCTATTACTTGTTCTTTCTTTGCTTAGTTGCACAAGCCCACGATTATCCATCTCCTTCTGTTAGATATCCTTGTGAAGATGTTAACGAGTATTATGCTAATGTAGCACAGTTAACAGGTGAACCTCTCAAACGTAAGCTAAATTCAATCATTGCTGCACATCATTCCTTGTCCTATAAAGAGGTCTGGGATGCCATCAAGATTCTTGATGCTGCTGATGTGGACAAACCAGAAGCCTCATCAGAAATAGTGGAGATTTACTCGCAAAGGATTGTGTCAAAGTCGCTAGCAGGGAAGCCTGAGGGTTGGAACAGGGAGCATTTGTGGCCTCGCTCTTATGGGCTCAGAAGAGGTCCATCCCTGACCGATTTGCAGAATATCCATCCAGCAGATGCAAATGTGAATTCCTCCCGGGGGAACAAATATTTTGGAGAATGCCAAGTTAACTCCCCAGAATGTATGAAGCCAGCCTACAAAGAAGCTGCTTATGATACCGAAACAGACAAGGAAAAATGGGCACCACCTAAGCGCGTTAGAGGAGATATAGCACGGGCAGTAATGTATATGGCAGTCTGTTATGGGTTCCACCTTTCTGATTCTCCAGACAAGGGAAATAAGGAGATGGGCTTAATTTCTACATTGTTAAAGTGGAATAAGAGTGATCCGCCGTCAAGAGAAGAGAAGTTGAGAAATGAAAGAATATGCAAGTTTTATCAGCACAATAGAAATCCGTTTGTTGATCATTCAGAATACGCTGATCTAATTTGGAAGTCTCAGATCGCCATGAGGCTGAAGGCATAA ATGACGATCGATAGCTTCTACACCCAGAGACCATGCAATCTGGAGTCGTCTTCTACACCCAGACGCTTTCAGTTGAAATCGATATCGAAATCGAAATTTCCTTCGGTTCCACAGACCAAATCTACGAAGCTTCGCATTGAATTTCATTCGAAGGCACACCATAGCCTCGATAAGCTCCCGTTTATGCGAGTTCGCTGCTCCGTCTCCGCCCTCTTTCACTGGGACTCATGGAGTTCTATGTTGTCGAATTGCTTAGACATTTCTTGGAGATGGGCTACTCAAATCACCTCCTATTACTTGTTCTTTCTTTGCTTAGTTGCACAAGCCCACGATTATCCATCTCCTTCTGTTAGATATCCTTGTGAAGATGTTAACGAGTATTATGCTAATGTAGCACAGTTAACAGGTGAACCTCTCAAACGTAAGCTAAATTCAATCATTGCTGCACATCATTCCTTGTCCTATAAAGAGGTCTGGGATGCCATCAAGATTCTTGATGCTGCTGATGTGGACAAACCAGAAGCCTCATCAGAAATAGTGGAGATTTACTCGCAAAGGATTGTGTCAAAGTCGCTAGCAGGGAAGCCTGAGGGTTGGAACAGGGAGCATTTGTGGCCTCGCTCTTATGGGCTCAGAAGAGGTCCATCCCTGACCGATTTGCAGAATATCCATCCAGCAGATGCAAATGTGAATTCCTCCCGGGGGAACAAATATTTTGGAGAATGCCAAGTTAACTCCCCAGAATGTATGAAGCCAGCCTACAAAGAAGCTGCTTATGATACCGAAACAGACAAGGAAAAATGGGCACCACCTAAGCGCGTTAGAGGAGATATAGCACGGGCAGTAATGTATATGGCAGTCTGTTATGGGTTCCACCTTTCTGATTCTCCAGACAAGGGAAATAAGGAGATGGGCTTAATTTCTACATTGTTAAAGTGGAATAAGAGTGATCCGCCGTCAAGAGAAGAGAAGTTGAGAAATGAAAGAATATGCAAGTTTTATCAGCACAATAGAAATCCGTTTGTTGATCATTCAGAATACGCTGATCTAATTTGGAAGTCTCAGATCGCCATGAGGCTGAAGGCATAA MTIDSFYTQRPCNLESSSTPRRFQLKSISKSKFPSVPQTKSTKLRIEFHSKAHHSLDKLPFMRVRCSVSALFHWDSWSSMLSNCLDISWRWATQITSYYLFFLCLVAQAHDYPSPSVRYPCEDVNEYYANVAQLTGEPLKRKLNSIIAAHHSLSYKEVWDAIKILDAADVDKPEASSEIVEIYSQRIVSKSLAGKPEGWNREHLWPRSYGLRRGPSLTDLQNIHPADANVNSSRGNKYFGECQVNSPECMKPAYKEAAYDTETDKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPDKGNKEMGLISTLLKWNKSDPPSREEKLRNERICKFYQHNRNPFVDHSEYADLIWKSQIAMRLKA Homology
BLAST of Carg09072 vs. NCBI nr
Match: KAG7021679.1 (Extracellular ribonuclease, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 755.0 bits (1948), Expect = 3.0e-214 Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0
BLAST of Carg09072 vs. NCBI nr
Match: XP_022931412.1 (uncharacterized protein LOC111437594 isoform X2 [Cucurbita moschata]) HSP 1 Score: 710.7 bits (1833), Expect = 6.5e-201 Identity = 347/364 (95.33%), Postives = 348/364 (95.60%), Query Frame = 0
BLAST of Carg09072 vs. NCBI nr
Match: XP_022931403.1 (uncharacterized protein LOC111437594 isoform X1 [Cucurbita moschata]) HSP 1 Score: 704.9 bits (1818), Expect = 3.6e-199 Identity = 347/368 (94.29%), Postives = 348/368 (94.57%), Query Frame = 0
BLAST of Carg09072 vs. NCBI nr
Match: XP_023531882.1 (uncharacterized protein LOC111794012 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531883.1 uncharacterized protein LOC111794012 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 670.2 bits (1728), Expect = 9.8e-189 Identity = 324/351 (92.31%), Postives = 329/351 (93.73%), Query Frame = 0
BLAST of Carg09072 vs. NCBI nr
Match: KAG6587712.1 (hypothetical protein SDJN03_16277, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 623.6 bits (1607), Expect = 1.0e-174 Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy Swiss-Prot
Match: Q03091 (Extracellular ribonuclease OS=Bacillus amyloliquefaciens OX=1390 GN=bsn PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 8.4e-42 Identity = 100/251 (39.84%), Postives = 134/251 (53.39%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy Swiss-Prot
Match: O32150 (Extracellular ribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=bsn PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.3e-39 Identity = 96/245 (39.18%), Postives = 129/245 (52.65%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy Swiss-Prot
Match: Q44064 (Periplasmic deoxyribonuclease OS=Aeromonas hydrophila OX=644 GN=dnsH PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 7.4e-06 Identity = 40/126 (31.75%), Postives = 55/126 (43.65%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy Swiss-Prot
Match: P39658 (Extracellular deoxyribonuclease OS=Aeromonas hydrophila OX=644 GN=dns PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05 Identity = 40/126 (31.75%), Postives = 55/126 (43.65%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy TrEMBL
Match: A0A6J1ETJ3 (uncharacterized protein LOC111437594 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437594 PE=4 SV=1) HSP 1 Score: 710.7 bits (1833), Expect = 3.2e-201 Identity = 347/364 (95.33%), Postives = 348/364 (95.60%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy TrEMBL
Match: A0A6J1EYI9 (uncharacterized protein LOC111437594 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437594 PE=4 SV=1) HSP 1 Score: 704.9 bits (1818), Expect = 1.7e-199 Identity = 347/368 (94.29%), Postives = 348/368 (94.57%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy TrEMBL
Match: A0A6J1BZP9 (uncharacterized protein LOC111007064 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007064 PE=4 SV=1) HSP 1 Score: 604.7 bits (1558), Expect = 2.4e-169 Identity = 296/362 (81.77%), Postives = 313/362 (86.46%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy TrEMBL
Match: A0A6J1ETL7 (uncharacterized protein LOC111437594 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111437594 PE=4 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 2.8e-165 Identity = 294/315 (93.33%), Postives = 295/315 (93.65%), Query Frame = 0
BLAST of Carg09072 vs. ExPASy TrEMBL
Match: A0A0A0LUE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G433090 PE=4 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 5.5e-153 Identity = 270/343 (78.72%), Postives = 282/343 (82.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|