Carg09060 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09060
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nucleolar and coiled-body phosphoprotein 1 isoform X1
Location	Carg_Chr11: 1786118 .. 1789521 (-)
RNA-Seq Expression	Carg09060
Synteny	Carg09060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGAGACGAGCGTATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGGTCAGTACTTCGAACTCTGGTTCTTCGCGGTTTCGTAAGTCAAACTTTTTGGTTGCGGTGGTTAATATTAGTTTTATTCATTTGCTGCTCATTATGGCGTTGAATCGATTGTCTTTACAGAATGCGCTATTCATGGACCTTCTCGTCCAAAACGCTTGTTTTGTTAAAGTTTAATCCTATTTTCATGTTTTTATCGAACAAGGTTATCTATGTTGAAACAATTCCCTTTTCTGTTGCTATTCGCGCAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGGTAGGATTAGAGATTATCTTGATTCTTGTCTAAACTCAAAAGAAAAGTGACAATTTCTTATGTATTGATTTCTTTTGCCCGAATCTTATTTGATCTAGATATGAATTCATTCATCTAACTTAAAAGTTATAATATGCAGTACTCAAGCCATTGCTACACCAAACAAACCAGGTATTCTCATATTGTCCACGATCTTTTAATTTATTTGTTCTTATAGTTTAGGAAACTTAGCTACAATTATTTTTAAAAATTTGTAATACGACATGAAATGATTGATTTTAATTGTGCATCTCTTCTTGGCTGGATTTGATCTAGTAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGGTATGTGTATATTGGCATCACATAGAGGTCGAATTTCTTTATCTGCAATAATCTTTTGATGATTTAACTATATTTTGGCATTGTAATATGTAGAAGACTCAAGTGTTCTGTCTTTAATCCTTTCGATATTTAACTAGACATAGGGCCTCCAAAGATGTGAAAAACATAATAACTTAACTCCATGAGCATGCCAAATATCTTTGTGAGATCCTATATCGGTTGGAGAGGGGAACAAAGCATTCTTTATAAGAGTATGGAAACCTCTCCCTAATAGACGCATTTTTAAACCTCGAAGGGAAAGCTTAAAGAGGACAAAATCTGCTAGTGGTTGGCTTGAATTGTTACAAATGGTATCAGAATCAGATACCGGGCGCTGTGCTAGCAAGGACGTTGGGCCCCCAAGGGGGGTGGATTTTGAGATCCCACATCAATTGGAGAGGGAAACGAAACATTCCTTATAAGGGCGTGGGAATCTCTCCCTAACAGACATGTTTTAAAACCTCGAGGGGTAGCCTTTGAAGGGAAAGCTTAAAGAGGACAATATCTGCTAGCGGTGGACTTAAGCTATTAGAATCCCACATATAGCCGCTCTTCTGCTTCTAAATGTCTTCTCTCCTTGAGTGGCGCCTATTTTTTATATGTATATGGCAAGCATTTTGTGATTCTAGTAGCAATTTGAAAAAAGAAGCAAGTTGACTTGGTAATGGAATATCAATTTTTAATATTCATGTATGATATGAAGAAGATTTAGTTAATACCCATCGAATTCCACAAATTGTATTTGTTGCTAAAGATCAGTGAACATGAGGTAGTGGGATCTTTTAAATTTTAATCCTTATCACTTTCACTTGATACAAGATCAACTGTGCTGAAAGATTGTATAATTGCAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGTGGGATTTGCTATATTATTGGCTTCTTGCCGCAATGCAGCTTGCTTTCAGTAGGATCTTTTGTTTCTCATTTCTAATCTATCATATTGGGCAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGGTTAAAGGAAGGTATTTTTCCCTGACCCTTTTCTCTCTTAGCTTTTACTTAGTTCTAGCTTATAGTTTGTCTATGGTGTTTAGTAACTGCTGCTGATGTGCTAAAAGTTTGGATGTTAAATATTTTAACTGAGAATGGTCGATGAGAAAATGAGAGAAGGGAGGGGGGGTGTGGATGGTAATGTCATCTATGTGAATGAAAGAAACACGTGTGTCTTAGTGTGAGATCCCACATTGGTTGGGAAGAAGAATGGAACATTCTCTATAAGGGTATGGAAACCTATCCCTAGTAGATGCGTTTTAAAAACCTTGAGTGGAAAACTCAAGGAGGACAATATTTACTAGTGGTGAGTCGGGCCGTTACACTTGACGTTTGTTATTGGGTTAAAACATTTTGTTGACTAAAATTTCCTCAATACTTCTTGGTTCAAATTTATGTATTTCTCAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGATGATTGATCATCATATTAATGGATTCAGATTATGGTTCTTCACCTCTTTTTATCAATCATGAAGGAGGGAAGTTTCCATTTAATGAAAAAAATAGTTGTATGTTGCATAGAAATTGGAAAGGATTGATTGATGTTCTATAGAACATTATTTTTTGGAAGGAATCCACTCAAAAGTTGGGCTACTGCCTTCACCGATCCTGAACTTAATATTCTATTGTGTAGGTCTCC

mRNA sequence

AATGAGACGAGCGTATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCTACACCAAACAAACCAGTAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGTGGGATTTGCTATATTATTGGCTTCTTGCCGCAATGCAGCTTGCTTTCAGTAGGATCTTTTGTTTCTCATTTCTAATCTATCATATTGGGCAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGTTCTCGGGCAGGTTAAAGGAAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCCGATGATGATTGATCATCATATTAATGGATTCAGATTATGGTTCTTCACCTCTTTTTATCAATCATGAAGGAGGGAAGTTTCCATTTAATGAAAAAAATAGTTGTATGTTGCATAGAAATTGGAAAGGATTGATTGATGTTCTATAGAACATTATTTTTTGGAAGGAATCCACTCAAAAGTTGGGCTACTGCCTTCACCGATCCTGAACTTAATATTCTATTGTGTAGGTCTCC

Coding sequence (CDS)

ATGACCCGAACCCTAACCACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACGCCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTCTTCTTCTTCACGCCGTGTCCCTCTTTTTGCACCGCAATGGCTTCTCCAAAACGCTCAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTCTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCTACACCAAACAAACCAGTAGATGAAGAAACGGTGAAGGAGGGTTTCGATGATAGGGCTCCTGAAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATCAAGAAGGCAGTTGCCGAAACTCATGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGCTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGGTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGGAACTTTGAATGAAAGTATTGGTATCAAGACACCACATGAAGAAGAACACAATGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTTGTACCGTTGATCAGAATGAAACTGAAGATATCAAACGCAGAAAATTAGAAGGTTCAAAAGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCACAGCAGACGAATGAGTATGTTGAAAAAACTGCAGAGAAAACTTCTTCAAAGAAAGCTCTGAAGAAACATTCAAATGGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCTGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGTGGGATTTGCTATATTATTGGCTTCTTGCCGCAATGCAGCTTGCTTTCAGTAG

Protein sequence

MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKNKENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVGFAILLASCRNAACFQ

Homology

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BLAST of Carg09060 vs. NCBI nr
Match: KAG7021691.1 (hypothetical protein SDJN02_15417 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 677.2 bits (1746), Expect = 8.1e-191
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVGFAILLASC 360
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVGFAILLASC
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVGFAILLASC 360

Query: 361 RNAACFQ 368
           RNAACFQ
Sbjct: 361 RNAACFQ 367

[Close]

BLAST of Carg09060 vs. NCBI nr
Match: XP_022931348.1 (nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 643.3 bits (1658), Expect = 1.3e-180
Identity = 350/352 (99.43%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENA TLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGG 352

[Close]

BLAST of Carg09060 vs. NCBI nr
Match: KAG6587726.1 (60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 638.6 bits (1646), Expect = 3.2e-179
Identity = 350/352 (99.43%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP DEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP-DEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGG 351

[Close]

BLAST of Carg09060 vs. NCBI nr
Match: XP_022931357.1 (nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 637.1 bits (1642), Expect = 9.3e-179
Identity = 349/352 (99.15%), Postives = 349/352 (99.15%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP DEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP-DEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENA TLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGG 351

[Close]

BLAST of Carg09060 vs. NCBI nr
Match: XP_023530907.1 (nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 622.1 bits (1603), Expect = 3.1e-174
Identity = 341/352 (96.88%), Postives = 344/352 (97.73%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK
Sbjct: 61  FLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EG DDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGLDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KEN AT+EENVVKSKKKKKKDGRLLSDENSNQLMTRCSE TLNES GIKTPHEEEHNDKS
Sbjct: 181 KENVATVEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEETLNESDGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDS TVDQNETEDIKRRKLEGS+GCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSHTVDQNETEDIKRRKLEGSEGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           TAEKTSSKKALKKHSNGSAEPKT NAFQRVKVDAVTFSD+KLADNSYWAK G
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTFNAFQRVKVDAVTFSDDKLADNSYWAKDG 352

[Close]

BLAST of Carg09060 vs. ExPASy TrEMBL
Match: A0A6J1EYA7 (nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437563 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.3e-181
Identity = 350/352 (99.43%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENA TLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGG 352

[Close]

BLAST of Carg09060 vs. ExPASy TrEMBL
Match: A0A6J1ETE6 (nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437563 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 4.5e-179
Identity = 349/352 (99.15%), Postives = 349/352 (99.15%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP DEETVK
Sbjct: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKP-DEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KENA TLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS
Sbjct: 181 KENAVTLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Sbjct: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGG 351

[Close]

BLAST of Carg09060 vs. ExPASy TrEMBL
Match: A0A6J1IDS9 (nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473013 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.7e-165
Identity = 330/352 (93.75%), Postives = 333/352 (94.60%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSHHTTKKANDIEAPMSAIKAVSLDPEQRTILLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIAT NK VDEETVK
Sbjct: 61  FLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATQNKRVDEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EG  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGLGDRAPGAQEEPTKKSKDKKKIKKAVPETLVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KEN ATLEENVVKSKKKKKKD RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKS
Sbjct: 181 KENVATLEENVVKSKKKKKKDVRLLSDENSNQLMTRCSEETSNENDGTKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSHTVDQNETEDIKRRKLESSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           T+EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Sbjct: 301 TSEKTSSKKALKKHSNCSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGG 352

[Close]

BLAST of Carg09060 vs. ExPASy TrEMBL
Match: A0A6J1IB66 (nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473013 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 2.7e-163
Identity = 329/352 (93.47%), Postives = 332/352 (94.32%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           MTRTLTTSVSPSLLAFKPRQVLLS HTTKKANDIEAPMSAIKAVSLDPEQRT+LLHAVSL
Sbjct: 1   MTRTLTTSVSPSLLAFKPRQVLLSHHTTKKANDIEAPMSAIKAVSLDPEQRTILLHAVSL 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           FL RNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIAT NK  DEETVK
Sbjct: 61  FLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATQNKR-DEETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDSVQEEARKKSKDKKKKKN 180
           EG  DRAP AQEEPTKKSKDKKKIKKAV ET VDIAENEKSDSVQEEARKKSKDKKKKKN
Sbjct: 121 EGLGDRAPGAQEEPTKKSKDKKKIKKAVPETLVDIAENEKSDSVQEEARKKSKDKKKKKN 180

Query: 181 KENAATLEENVVKSKKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKS 240
           KEN ATLEENVVKSKKKKKKD RLLSDENSNQLMTRCSE T NE+ G KTPHEEEHNDKS
Sbjct: 181 KENVATLEENVVKSKKKKKKDVRLLSDENSNQLMTRCSEETSNENDGTKTPHEEEHNDKS 240

Query: 241 KKRKRLASEDLDSCTVDQNETEDIKRRKLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300
           KKRKRLASEDLDS TVDQNETEDIKRRKLE SKGCNDGVQSTKVNTSNELSQQTNEYVEK
Sbjct: 241 KKRKRLASEDLDSHTVDQNETEDIKRRKLESSKGCNDGVQSTKVNTSNELSQQTNEYVEK 300

Query: 301 TAEKTSSKKALKKHSNGSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKVG 353
           T+EKTSSKKALKKHSN SAEPKTINAFQRVKVDAVTFSDEKLADNSYWAK G
Sbjct: 301 TSEKTSSKKALKKHSNCSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGG 351

[Close]

BLAST of Carg09060 vs. ExPASy TrEMBL
Match: A0A6J1C1H7 (nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007414 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-114
Identity = 264/411 (64.23%), Postives = 292/411 (71.05%), Query Frame = 0


Query: 1   MTRTLTTSVSPSLLAFKPRQVLLSRHTTKKANDIEAPMSAIKAVSLDPEQRTLLLHAVSL 60
           M++TLTTSVSPSLLA KPRQVLLS+    +    E P S  + VSL+PEQRTLLLHAV+ 
Sbjct: 1   MSQTLTTSVSPSLLALKPRQVLLSQTNMTRKARAETPKSD-QGVSLEPEQRTLLLHAVAF 60

Query: 61  FLHRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATPNKPVDEETVK 120
           +L RNGFSK+LKKFRSEAQIEKD SKD  +SLEEMCH +LKKC+QAI T NK V+ ETVK
Sbjct: 61  YLERNGFSKSLKKFRSEAQIEKDSSKDFLISLEEMCHEYLKKCSQAITTQNKQVNVETVK 120

Query: 121 EGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAENEKSDS----------------- 180
           E  DD  PEAQEEP KKSK+KK  K  V ETH D  E EKS+S                 
Sbjct: 121 EVADDNVPEAQEEPKKKSKNKKTKKDMVPETHADTVEKEKSESVHVESLKNSKGTEPPEG 180

Query: 181 --VQEEARKKSKDKKKKKNKE---------------------------NAATLEENVVKS 240
             V EEA KKSKDKKKKKNKE                           NA TLEE V KS
Sbjct: 181 TTVHEEAGKKSKDKKKKKNKEKLESCATISDDNVSGDSQAVDSITWNGNAITLEEKVAKS 240

Query: 241 KKKKKKDGRLLSDENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSC 300
           K KKKKDG+ L DENSNQLMT   EGT+N++ GIKT HE+E+ND SKKRKRLASED DS 
Sbjct: 241 KAKKKKDGQHLCDENSNQLMTENLEGTVNKNGGIKTVHEDENNDHSKKRKRLASEDHDSH 300

Query: 301 TVDQNETEDIKRRKLEGSKGCNDGVQSTKVN-------------TSNELSQQTNEYVEKT 353
           TVD+  TED+KRRKLEGSKGCN+GVQSTKVN             TSNELSQQT E VEKT
Sbjct: 301 TVDEKVTEDVKRRKLEGSKGCNNGVQSTKVNASVETDVNAGSRGTSNELSQQTIENVEKT 360

[Close]

BLAST of Carg09060 vs. TAIR 10
Match: AT5G57120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 4.1e-15
Identity = 110/328 (33.54%), Postives = 157/328 (47.87%), Query Frame = 0


Query: 42  KAVSLDPEQRTLLLHAVSLFLHRNGFSKTLKKFRSEAQIEKDFSKDLSLS---LEEMCHM 101
           K  +L+ EQ+ LLL +V+ +L R GFSK  KK  SEA+IEK   K+L+ S   LEE+   
Sbjct: 6   KTSALESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEK---KELNTSLPDLEEIFSE 65

Query: 102 HLKKCTQAIATPNKPVDEETVKEGFDDRAPEAQEEPTKKSKDKKKIKKAVAETHVDIAEN 161
            L K            D E    G  +       E  KK K KKK K    ET V++ E 
Sbjct: 66  FLNK-----------RDHEAAANGNTEANVVEAVENVKKDKKKKKNK----ETKVEVTEE 125

Query: 162 EK---SDSVQEEARKKSKDKK--------KKKNKENAATLEENVVKSKKKKKKDGRLLSD 221
           EK   +D+V E+  K+ K KK        ++K KE  A +E+ V + KKKK K   + +D
Sbjct: 126 EKVKETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVIEDGVKEKKKKKSKSKSVEAD 185

Query: 222 ENSNQLMTRCSEGTLNESIGIKTPHEEEHNDKSKKRKRLASEDLDSCTVDQNETEDIKRR 281
           ++  ++                          SKKRKR   E+    T D +E E  +R+
Sbjct: 186 DDKEKV--------------------------SKKRKRSEPEETKEETEDDDE-ESKRRK 245

Query: 282 KLEGSKGCNDGVQSTKVNTSNELSQQTNEYVEKTAEKTSSKKALKKHSNGSAEPKTINAF 341
           K E     ++GVQ T V    E   + N   EK+  K++++K+ K  SN S EPK    F
Sbjct: 246 KEENVVENDEGVQETPV---KETETKENGNAEKSETKSTNQKSGKGLSN-SKEPK--KPF 279

Query: 342 QRVKVDAVTFSDEKLADNSYWAKVGFAI 356
           QRV VD + +++     NSY++K G  I
Sbjct: 306 QRVNVDEIVYTEN---SNSYYSKGGAEI 279

The following BLAST results are available for this feature:

BLAST of Carg09060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021691.1	8.1e-191	100.00	hypothetical protein SDJN02_15417 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022931348.1	1.3e-180	99.43	nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita moschata]	[more]
KAG6587726.1	3.2e-179	99.43	60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022931357.1	9.3e-179	99.15	nucleolar and coiled-body phosphoprotein 1 isoform X2 [Cucurbita moschata]	[more]
XP_023530907.1	3.1e-174	96.88	nucleolar and coiled-body phosphoprotein 1 isoform X1 [Cucurbita pepo subsp. pep...	[more]

BLAST of Carg09060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg09060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYA7	6.3e-181	99.43	nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1ETE6	4.5e-179	99.15	nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1IDS9	3.7e-165	93.75	nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1IB66	2.7e-163	93.47	nucleolar and coiled-body phosphoprotein 1 isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1C1H7	2.3e-114	64.23	nucleolar and coiled-body phosphoprotein 1 isoform X1 OS=Momordica charantia OX=...	[more]

BLAST of Carg09060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57120.1	4.1e-15	33.54	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 170..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..320
None	No IPR available	PANTHER	PTHR23216:SF2	LIS1 HOMOLOGY MOTIF, SRP40-RELATED	coord: 6..355
None	No IPR available	PANTHER	PTHR23216	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	coord: 6..355
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 50..82 e-value: 0.0015 score: 27.8
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 50..82 score: 9.441557

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09060-RA	Carg09060-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005515	protein binding