Carg09040 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09040
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	U3 small nucleolar RNA-associated protein 25
Location	Carg_Chr11: 1912906 .. 1918503 (+)
RNA-Seq Expression	Carg09040
Synteny	Carg09040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTTGAAGACCCTACTAACTGGGCTTGTTTCCACAGTAAACAACGACAAACCTTCCTCATCTCAACAAGGTGGGCTCACACCATTTGGATGATTATTACAAAGCATAATCCTGTCATAGTGATTCTTCAAGAAACTAAAACCTTCATGGAGCTCTTAGAACATTGATGGGACAGAGCTTGAGGCTAATGGAAACCCCGTTTTTGGCAAGATCTTCTGGACCTATCAGCCCTTTGTCTTGACAGGTGGATTCTAGGAGAGGATTTTTATGTCACTAGATGAGTAATGAGAAATCGACTTGCTGTGTTAGTAGAAGCATGCGAAAATTTAGTTTTTTCACTGATTGCTGTAATCTCATCGATTTGCCCCTCCAAAATGGCCTTCACACTTGGTCTAGCTTTAGAGGGAACCCCATTTTGTCCCTCATTGGTAGATTCCTTGTCTCTAACCCTATCCTTTATAAATACAAAGATGCACCAGTCAAGCGTTTGGATTGGCCTACGTCCAGCCATTTTCCCATCATGCTGGTTTCGGGTTCAATGAAATAGGGTTCCTACCTTTTTTGTTTGAAAATATGTGAATGGTGCACCACCCCATTCTCCCTTTGATTCAAAATTGGTGGAGTGTCAATACCTATGATAGATTGTAGAGAAGGTCTCCTTATATGGCCCTTTCTCATTGCTGCATATTATGTAAAGCCGATTCTAAATCTCAGAGCCATCTGTTTTTCTCATGCCACTTTGCTGCCAGGTTCTGGAAGGAGCTCTTTTCCTCCTGCTGTTGGTCTATTACCCTTCCTGATGAGATCAACAGCCTCCTTTTGTTCTCGTTTGACATCCTTTTTCCTAGGATAAAAGTCTTATTTGGATGTACATTGTTCAGGCACTTGGAATGAAAGGAACAACCCTATTTTCAAGGAAAGGAAAGTTCTTTCGAGAGTTCTTTGAACAAATTATCTTTGCTATGTGTTAGTACAAATGTTCTTCATTTTATTGTTCTTACAGTCTCTCCACACTTTTGTCCAATTAGAGATCCCTTTTGTAACTCCTTTGGTTTTGGGTTTTTCCTTTCTTTTAAATTTCATACATCAATGAAATTTGTTATATATATAATTAATCAATCTGTTTTCATTAGGTTTGCATGCTTGGAAATTTTATCCCATTATCTACATTTATGAAATCACTGTCATATTTGTAGGTATCTTGATGGATATGCGAGGTTCTATAGGCAGTCAATAGTTTTGGGTTTTCACTCAAACCCAGGTAAGGTACACCTATTGTTCGTATGCAATCCAATCCATGTAGCTCAATTTCTTGAATCCCAAAATAATTGAGTTTCTAAGTCATTTTCTAACTTGATTTAATGCTACATACTATGCGAGTAGAATACGCTTGGTGGGTTCAGAACTTTAATTTTGTCCTATGTCAAAAAATGGCTGGAGTGGGTTATTTGATTAGATCACTTGAGCAAGAGGGTTCTGCTATTTAAATTGTCGAACCATCTATAACAATGCTTTTAAACCATATGGGTGTTATTTATGTTGCAATGTCATCATTATATAGAGTGACTCGTGTTTTAATAATAATAATGGTCTTGAAAAATCTCATTTTGTTTAGTTTTAGTTTAATTCTGATAATGATTTCAAAAAAAGAAAATGTTGTGCGTCAACTAGTTCACATTTTTAGGGAAAAGATATGAATTTATAAATAACAATTATGAGTTTGGTAGGGGTCATTTGTTTCTCTCTTTTGGGCAACGATAAATTAAATAGTAGCATGAACAAGTAATAAATAACAGGGAATTCAAGAAAATAAAATAAAAATGTATTAGATCAAGTTATAGTATCTGGCTATCTGCAAATGCAATTGCTTTACAGTACTCTACAACAGCGTACTGTGCAATTATCCCAAAATGCCGTTTTAGATATTTTCCCTTTAATGAATTATGAAATGGTTCGTTGTAAGCGGGAAATTTATTACTTCTCTGATGTTTAGATCTTGTATGAGTAACTGTATTTTTATGACGTTGAATCTTTTATTATAATCTTAATGATTGCGATGAAGTATTTTTAATTTCTTTTACATCTTGTTGTTAATAGATATAAATGGATTTTTCAATCGCTACTGCAACAACTTCGAAGGAAAGGTGCATCTTTTTTCTTTGTTACATTATTGTAACGCAGAAATTTCATTTCTATCTTTTATTGATTCTCTCTTAATTCTTAATTGATTAGTGGATACTGAATAGTTCTTTGTGAGTGTTAGACAAGAGTGCAGACCAATTGTGAGTTAGTATGTTTATTTTGTGGTTGGGGGGGGGGGGGGGTGTGAAATTAGCTACCTGGAGATGGGCATTCAATGGCAGAATTTTTTTTTTTTTTGATTTACTGATTTTCTTTTACTTGGTATGGTTTCGTCTCTATTTATTACATATCCTGAATGTTTAACATGACATGTGGTAGGTGAGGTTGTTATGTGAATACAAAGGCATTCTTCCAAAAGTGGTGCTCCAAGTCCGCCAGGTTTGTCTGTTTTTTCATGCTTTTCTGTTCCTTGCTCTTGCAGCAGTTGTTTTTCACTTGAGAAAGAGTTCTAGGCGCTTCCTGCAAAAGCACCTTAAAGTTGTTTGAATTGTTTTTGAAATTGCTCATTTTGGGTACTTTTCTTGTGTGTATGTTTGTTTCAGGTGTACGAGAGATTTGAGGCAGACTCTATAGCTGATGTTGATGATGCTCGTCTTGAGTACTTTTCCAAGAAGGTTTGTTTCTTTTATTTTAGTGGTGTAATACAGAATGCTTTTTCCTTGGGGGGAAATAGAAACATGTTAATTTCTTAGCTTCGTTTTGTCAAAAGATATGGGGCTTGATTTTGAACCTGGCTGTTAGTGTGATGCTGGCCTCCCTTGCAATAATTTTTAGATGATCGTTCATGCAGTGGTTTGAGCTTTTGAAATAGTTATAAATTTTTTCTTGATGTTACCAATGATTAACGATATTAGGCTGAGAATGGAATATATATGAGAAGTTTATTCTGCTTAAAATCTAGTATCACGCAGAGGTTGTTTTTGTTTTTTTTCAAATAGCAAATACTTCAGTTAGTTGTTTGAGGATTTGACTTGGTTGATCTAAGTGAAAATAAAGTCTGATAAACCAAAGTTAGCGGAAGTGAGATTTAATACCTTTATTATTGATCTGATGATTTAAAATGGGTGTCTAATTTCTTCTTCAGGTGTTTCCAAAGATAAACGAATCTAGTCAGGTAACGTTTTTTCACTAATGATGACATTGTTTGATTGATGAAGTCTTATTTATATATTTTTGTCTTGTCTTACCCGTGGAATTTTGCACTCAGGGTGGAGTCATGCTATTCATTAGTTCTTACTTCGAGTTTGTCAGAGTTCGGAACTTTTTGAAGATGCAGAATGCTTCATTCTGTCTTCTTGGAGAGTAAGAAGCCTGTCGTTTTACTTCTAAACTGATGCATAAATTTATTGATTTACTGACTTTTTTTTTTTTTTTTTCTTTTTTGCTGTATCCTCGATTGCTTCTGTTGTCATGCATAATGATCTAGTTTTGTTCTTTAGGTATACAAAGCAAAGTGATATCTCACGGGCGCGCAATTGGTTTTTTGAGGGAAAGCGGAAGATCATGTTATACACAGAGAGAGCTCATTTTTATCACAGATATAAGGTTACTTATAACGCTATATACCTTTCTAAAAAGCTTAATGTCGTCTTCATTAGTGTATATTTGTTATCTGCTACTGAGAAACATTTGTGCGCGTCAGGTTTTGTGTTTTGGTAAGAACTAACTTTCATTGACCAGAATGGGAGAATATAAGGGGACAGAAAAGAACGATCGGGAGATTAGATCCCTAGCCACTCTAGTCTACTGGTTTGCAAAAAGTTTTTCCTATTGGCATTGATCCTAAAGAATTTTAATTAGAAAATAAGGAACTTAGGGGGAGTACATTAAAAGTAGCTTAAACTTTTAATCATCTCCCATACATCCTCTAAATCACTCCACTTCTCTTTGGAATTTCAAAACCACAAACCTAACTGCATTAGAACATGAAAATTGAACTTCAGATTTTAGAGGAGCATGAAGCAAATTGGGATACTCTAGAGAAAACGTTGAACCTAGATAACCTTGCCATCGATGGAGAAAGAAACATTTCTCTGTTTACATGATGTTAAATTTTGAAACATCTTTTGTATTACAGTTGTATGGAAATGATTTACGTGCTGTAGTAAACTGAATTTCATCTATTAATCATGCTTATCCGACTATTCAAAATGATTGCTTAGCACAAGCATTTAGCATATATCATATACTCCCAATGAAGAAAAATTGTGTTTTATGTTGTACCTAACTTTAATTGTATCCTTGAGCTTCCATCATTTTTCATTTATTCAATAAAAAGTTACGTTTCTTGTTAAAAAAAAAAAAAATTGTTTCTCTTGGTAGTTTCCATTACTTGTGGTCCTCGGTAATAAAAATTGTTATCCTTGACCATGTATTTCCTTCTTGGTCTTAGATTCGTGGCATACAAAGCTTAATAATGTATTCCTTGCCGGAGAGGAAAGAGTTTTACCCTGAGGTAAACATGATGATTTTCTACTGAACTAATTATTAATATTATTTTACACCATATGTTTGATTTCATATGACATCCCCACTACTCTTCAGATTGTAAATATGCTTGATGGATCCGAGAACATGACATGCAGAGTTATATTTTCTCCTTTTGATCATCTCCGGGTAAGTGTCACTGTGCTGTTGTATTAGAACTTGTTTGAGGTCGATATTACGAATTCTTTTACATATCCAAGAGGTTTGAGTTTAATTCAAGATGTCATCTTGATGTGCGAGTGCTATATACATTATGGTATTACTTCTTATAGTTGCAATGAGATCCCTGTTTCTTTCATTTTATTAGTTTTGAATTTCACATGAAGAATTAACCGTTTTGAGTTCTTTGAGTAATCCTTCCTGGTATAAAAGACATAAAAAGAATGTCTAAATCGAGGACTAGTTAAACGAACATCGAGAAGTTACTACTTTGTATGACAGTTCCCAACTCTTGTGATTCGTGGTATTTTTTACGAACTTGGACTAAAAAAATGGGAATTGTCTAGGTTTTATGTCGGTTGTTTTGTAAGTCTTTTTATTTGAAGTATAACTCAATTGGTTAAGACATATATTCTCAATCAAGATGGTCAAATGTTCGACACTCCTATCTCACATGTTGAACTAAAAAGACGTTGTCGTTGGAGTATAAAACTACTTAAGTGGCTTCAAATTACCGTTCTTCCCTTCCGCTCTTGCTCTGTTATACTAACCTATTATCAATTTTATGTTAGCTGGAGAGAATAGTTGGAACCGTGCCAGCAAAAAGGATGGGGACATCAGATAAAAATGTCTTTGTGTTTTGCTAAGCCCACTTTTACCAGCCAGCATGCTCGCTGAAGGACCGAAACAGCCATGTGATGGTCTCTGCAAAAGTAGAGATGCGATGTCCCTATAACTGCCACAACATCGGAATCTCTTCGCGGCATGGCCCAACAATTTTGACTCACAAGTTCTGATTTTTTTTTT

mRNA sequence

ATGCAGTTGAAGACCCTACTAACTGGGCTTGTTTCCACAGTAAACAACGACAAACCTTCCTCATCTCAACAAGATATAAATGGATTTTTCAATCGCTACTGCAACAACTTCGAAGGAAAGGTGAGGTTGTTATGTGAATACAAAGGCATTCTTCCAAAAGTGGTGCTCCAAGTCCGCCAGGTGTACGAGAGATTTGAGGCAGACTCTATAGCTGATGTTGATGATGCTCGTCTTGAGTACTTTTCCAAGAAGGTGTTTCCAAAGATAAACGAATCTAGTCAGGGTGGAGTCATGCTATTCATTAGTTCTTACTTCGAGTTTGTCAGAGTTCGGAACTTTTTGAAGATGCAGAATGCTTCATTCTGTCTTCTTGGAGAGTATACAAAGCAAAGTGATATCTCACGGGCGCGCAATTGGTTTTTTGAGGGAAAGCGGAAGATCATGTTATACACAGAGAGAGCTCATTTTTATCACAGATATAAGATTCGTGGCATACAAAGCTTAATAATGTATTCCTTGCCGGAGAGGAAAGAGTTTTACCCTGAGATTGTAAATATGCTTGATGGATCCGAGAACATGACATGCAGAGTTATATTTTCTCCTTTTGATCATCTCCGGCTGGAGAGAATAGTTGGAACCGTGCCAGCAAAAAGGATGGGGACATCAGATAAAAATGTCTTTGTGTTTTGCTAAGCCCACTTTTACCAGCCAGCATGCTCGCTGAAGGACCGAAACAGCCATGTGATGGTCTCTGCAAAAGTAGAGATGCGATGTCCCTATAACTGCCACAACATCGGAATCTCTTCGCGGCATGGCCCAACAATTTTGACTCACAAGTTCTGATTTTTTTTTT

Coding sequence (CDS)

ATGCAGTTGAAGACCCTACTAACTGGGCTTGTTTCCACAGTAAACAACGACAAACCTTCCTCATCTCAACAAGATATAAATGGATTTTTCAATCGCTACTGCAACAACTTCGAAGGAAAGGTGAGGTTGTTATGTGAATACAAAGGCATTCTTCCAAAAGTGGTGCTCCAAGTCCGCCAGGTGTACGAGAGATTTGAGGCAGACTCTATAGCTGATGTTGATGATGCTCGTCTTGAGTACTTTTCCAAGAAGGTGTTTCCAAAGATAAACGAATCTAGTCAGGGTGGAGTCATGCTATTCATTAGTTCTTACTTCGAGTTTGTCAGAGTTCGGAACTTTTTGAAGATGCAGAATGCTTCATTCTGTCTTCTTGGAGAGTATACAAAGCAAAGTGATATCTCACGGGCGCGCAATTGGTTTTTTGAGGGAAAGCGGAAGATCATGTTATACACAGAGAGAGCTCATTTTTATCACAGATATAAGATTCGTGGCATACAAAGCTTAATAATGTATTCCTTGCCGGAGAGGAAAGAGTTTTACCCTGAGATTGTAAATATGCTTGATGGATCCGAGAACATGACATGCAGAGTTATATTTTCTCCTTTTGATCATCTCCGGCTGGAGAGAATAGTTGGAACCGTGCCAGCAAAAAGGATGGGGACATCAGATAAAAATGTCTTTGTGTTTTGCTAA

Protein sequence

MQLKTLLTGLVSTVNNDKPSSSQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYFSKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSPFDHLRLERIVGTVPAKRMGTSDKNVFVFC

Homology

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BLAST of Carg09040 vs. NCBI nr
Match: KAG7021710.1 (Digestive organ expansion factor-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.4 bits (1204), Expect = 3.6e-128
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MQLKTLLTGLVSTVNNDKPSSSQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQ 60
           MQLKTLLTGLVSTVNNDKPSSSQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQ
Sbjct: 1   MQLKTLLTGLVSTVNNDKPSSSQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQ 60

Query: 61  VYERFEADSIADVDDARLEYFSKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNAS 120
           VYERFEADSIADVDDARLEYFSKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNAS
Sbjct: 61  VYERFEADSIADVDDARLEYFSKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNAS 120

Query: 121 FCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFY 180
           FCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFY
Sbjct: 121 FCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFY 180

Query: 181 PEIVNMLDGSENMTCRVIFSPFDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           PEIVNMLDGSENMTCRVIFSPFDHLRLERIVGTVPAKRMGTSDKNVFVFC
Sbjct: 181 PEIVNMLDGSENMTCRVIFSPFDHLRLERIVGTVPAKRMGTSDKNVFVFC 230

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BLAST of Carg09040 vs. NCBI nr
Match: XP_022930084.1 (U3 small nucleolar RNA-associated protein 25 isoform X1 [Cucurbita moschata])

HSP 1 Score: 425.6 bits (1093), Expect = 2.7e-115
Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF
Sbjct: 505 SNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 564

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 565 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 624

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP
Sbjct: 625 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 684

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDKNVFVFC
Sbjct: 685 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 713

[Close]

BLAST of Carg09040 vs. NCBI nr
Match: XP_022930086.1 (U3 small nucleolar RNA-associated protein 25 isoform X2 [Cucurbita moschata])

HSP 1 Score: 425.6 bits (1093), Expect = 2.7e-115
Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF
Sbjct: 502 SNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 561

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 562 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 621

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP
Sbjct: 622 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 681

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDKNVFVFC
Sbjct: 682 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 710

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BLAST of Carg09040 vs. NCBI nr
Match: KAG6587740.1 (hypothetical protein SDJN03_16305, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424.1 bits (1089), Expect = 7.8e-115
Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF
Sbjct: 505 SNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 564

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGV+LFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 565 SKKVFPKINESSQGGVILFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 624

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP
Sbjct: 625 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 684

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDKNVFVFC
Sbjct: 685 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 713

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BLAST of Carg09040 vs. NCBI nr
Match: XP_023531649.1 (U3 small nucleolar RNA-associated protein 25 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.5 bits (1085), Expect = 2.3e-114
Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNR+CNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF
Sbjct: 503 SNPDINGFFNRHCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 562

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 563 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 622

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGS+NMTCRVIFSP
Sbjct: 623 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSDNMTCRVIFSP 682

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDKNVFVFC
Sbjct: 683 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 711

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BLAST of Carg09040 vs. ExPASy Swiss-Prot
Match: Q68CQ4 (U3 small nucleolar RNA-associated protein 25 homolog OS=Homo sapiens OX=9606 GN=UTP25 PE=1 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-42
Identity = 85/210 (40.48%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 26  INGFFNRYCNNFEGKVRLL-CEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYFSKK 85
           IN  FN+YC N +G+V +      G +  V++Q+  V++R EA+++A V DAR  +F  K
Sbjct: 542 INSVFNKYCVNMQGQVAVRNVPMTGSISHVLVQLPHVFQRMEAENLASVIDARFNFFVNK 601

Query: 86  VFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGK 145
           + P+  ++     +++I SYF+FVR+RN+ K +  +F  + EYT++S +SRAR++F +G+
Sbjct: 602 ILPQYRDAVMSHTLIYIPSYFDFVRLRNYFKKEELNFTHICEYTQKSGVSRARHFFLQGE 661

Query: 146 RKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSE-----NMTCRVIF 205
           ++ +L+TER HFY RY I+GI++LI Y LP    FY EI NML  +        TC V++
Sbjct: 662 KQFLLFTERFHFYKRYTIKGIRNLIFYELPTYPHFYSEICNMLRATNRGEEATWTCTVLY 721

Query: 206 SPFDHLRLERIVGTVPAKRMGTSDKNVFVF 230
           S +D  RL  +VG   A +M  S+KNV +F
Sbjct: 722 SKYDAQRLAAVVGVERAAQMLQSNKNVHLF 751

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BLAST of Carg09040 vs. ExPASy Swiss-Prot
Match: Q642T7 (U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=8364 GN=utp25 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.1e-42
Identity = 87/216 (40.28%), Postives = 134/216 (62.04%), Query Frame = 0


Query: 20  SSSQQDINGFFNRYCNNFEGKVRLL-CEYKGILPKVVLQVRQVYERFEADSIADVDDARL 79
           S  +  IN  FN++C N+ G+V +      G +  VV+Q+  V++R EADS+  V DAR 
Sbjct: 544 SLQEPQINSIFNKHCFNYCGQVAVRNMPVTGSISHVVVQLPHVFQRLEADSLLTVIDARF 603

Query: 80  EYFSKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARN 139
           E+F+ K+ P+  ++     +++I SYF++VR+RN+ K +  +F  + EYT +S +SRAR 
Sbjct: 604 EFFTSKILPQYRDAIMSHTLIYIPSYFDYVRLRNYFKKEELNFTHICEYTNRSGVSRARQ 663

Query: 140 WFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLD----GSE-NM 199
           +F +G+R+ +L TER HFY RY ++GI++LI Y LP    FY E+ NM+     G E   
Sbjct: 664 FFLKGERQFLLVTERFHFYKRYTLKGIRNLIFYELPTYPHFYSEVCNMMKAWHRGEEATW 723

Query: 200 TCRVIFSPFDHLRLERIVGTVPAKRMGTSDKNVFVF 230
           TC V++S +D  RL  +VG   A +M  S KNV +F
Sbjct: 724 TCTVLYSKYDAQRLAAVVGAERAAQMLQSKKNVHLF 759

[Close]

BLAST of Carg09040 vs. ExPASy Swiss-Prot
Match: O74974 (U3 small nucleolar RNA-associated protein 25 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp25 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.7e-40
Identity = 83/214 (38.79%), Postives = 128/214 (59.81%), Query Frame = 0


Query: 25  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYFSKK 84
           DIN FF+ Y +N  GKV+      G+L ++  +V Q + R   DSI  V DAR  YF+  
Sbjct: 439 DINSFFSHYMSNIAGKVKFRSLLHGVLNRLGYKVTQTFVRISVDSIIKVPDARFSYFTGS 498

Query: 85  VFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGK 144
           +  ++ + SQ G++++I SYF+FVRVRN++  +  ++  + EY+  SD++RARN F++G+
Sbjct: 499 ILVQLKKYSQSGILVYIPSYFDFVRVRNYMDEEGINYSAISEYSSVSDMTRARNLFYQGR 558

Query: 145 RKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNM---------LDGSENMTC 204
             IMLYTERAH + R+  RG+++++MY  P   +FY E+V M         LD S+   C
Sbjct: 559 TNIMLYTERAHHFRRFDFRGVKAVVMYGPPTNPQFYVELVRMPMRTISEGNLD-SDAAKC 618

Query: 205 RVIFSPFDHLRLERIVGTVPAKRMGTSDKNVFVF 230
           R++++ FD + LE IVG      M      VF F
Sbjct: 619 RIMYTKFDSICLEGIVGYQRVSNMCHGKHEVFEF 651

[Close]

BLAST of Carg09040 vs. ExPASy Swiss-Prot
Match: Q8BTT6 (U3 small nucleolar RNA-associated protein 25 homolog OS=Mus musculus OX=10090 GN=Utp25 PE=1 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 3.8e-40
Identity = 82/210 (39.05%), Postives = 130/210 (61.90%), Query Frame = 0


Query: 26  INGFFNRYCNNFEGKVRLL-CEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYFSKK 85
           IN  FN++C N +G+V +      G +  V++Q+  V++R EA  ++ V DAR  +F  K
Sbjct: 558 INSVFNKHCINAQGQVAVRNVPMTGSISHVLVQLPHVFQRMEAQDLSSVIDARFHFFINK 617

Query: 86  VFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGK 145
           + P+  ++     ++++ SYF+FVR+RN+ K +  +F  + EYT++S ISRAR++F +G+
Sbjct: 618 ILPQYRDAVMSHTLIYVPSYFDFVRLRNYFKKEELNFTHICEYTQKSGISRARHFFLQGE 677

Query: 146 RKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSE-----NMTCRVIF 205
           ++ +L TER HFY RY I+GI++LI Y LP    FY E+ NML  +        TC V++
Sbjct: 678 KQFLLLTERFHFYKRYTIKGIRNLIFYELPTYPHFYSEVCNMLRATSRGEEATWTCTVLY 737

Query: 206 SPFDHLRLERIVGTVPAKRMGTSDKNVFVF 230
           S +D  RL  +VG   A +M  S KNV +F
Sbjct: 738 SKYDAQRLAAVVGVERAAQMLQSPKNVHLF 767

[Close]

BLAST of Carg09040 vs. ExPASy Swiss-Prot
Match: Q5M9G7 (U3 small nucleolar RNA-associated protein 25 homolog OS=Rattus norvegicus OX=10116 GN=Utp25 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.5e-40
Identity = 81/210 (38.57%), Postives = 130/210 (61.90%), Query Frame = 0


Query: 26  INGFFNRYCNNFEGKVRLL-CEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYFSKK 85
           IN  FN++C N +G+V +      G +  V++Q+  V++R EA  +A V DAR  +F  K
Sbjct: 549 INSVFNKHCVNAQGQVAVRNVPMTGSISHVLVQLPHVFQRMEAQDLASVIDARFHFFINK 608

Query: 86  VFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGK 145
           + P+  ++     ++++ SYF+FVR+RN+ K +  +F  + EYT++S +SRAR++F +G+
Sbjct: 609 ILPQYRDAVMSHTLIYVPSYFDFVRLRNYFKKEELNFTHICEYTQRSGVSRARHFFLQGE 668

Query: 146 RKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSE-----NMTCRVIF 205
           ++ +L TER HFY RY I+GI++LI Y LP    FY E+ NML  +        TC V++
Sbjct: 669 KQFLLLTERFHFYKRYTIKGIRNLIFYELPTYAHFYSEVCNMLRATSRGEEATWTCTVLY 728

Query: 206 SPFDHLRLERIVGTVPAKRMGTSDKNVFVF 230
           S +D  RL  +VG   A +M  S K+V +F
Sbjct: 729 SKYDAQRLAAVVGVERAAQMLQSPKSVHLF 758

[Close]

BLAST of Carg09040 vs. ExPASy TrEMBL
Match: A0A6J1EQL5 (U3 small nucleolar RNA-associated protein 25 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436569 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF
Sbjct: 505 SNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 564

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 565 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 624

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP
Sbjct: 625 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 684

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDKNVFVFC
Sbjct: 685 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 713

[Close]

BLAST of Carg09040 vs. ExPASy TrEMBL
Match: A0A6J1EPX7 (U3 small nucleolar RNA-associated protein 25 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436569 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF
Sbjct: 502 SNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 561

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 562 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 621

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP
Sbjct: 622 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 681

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDKNVFVFC
Sbjct: 682 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 710

[Close]

BLAST of Carg09040 vs. ExPASy TrEMBL
Match: A0A6J1HN95 (U3 small nucleolar RNA-associated protein 25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465184 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.4e-114
Identity = 204/209 (97.61%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIA+VDDARLEYF
Sbjct: 406 SNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIANVDDARLEYF 465

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 466 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 525

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGS+NMTCRVIFSP
Sbjct: 526 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSDNMTCRVIFSP 585

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDK VFVFC
Sbjct: 586 FDHLRLERIVGTVPAKRMGTSDKTVFVFC 614

[Close]

BLAST of Carg09040 vs. ExPASy TrEMBL
Match: A0A6J1HJW3 (U3 small nucleolar RNA-associated protein 25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465184 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.4e-114
Identity = 204/209 (97.61%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIA+VDDARLEYF
Sbjct: 499 SNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIANVDDARLEYF 558

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF
Sbjct: 559 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 618

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGS+NMTCRVIFSP
Sbjct: 619 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSDNMTCRVIFSP 678

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FDHLRLERIVGTVPAKRMGTSDK VFVFC
Sbjct: 679 FDHLRLERIVGTVPAKRMGTSDKTVFVFC 707

[Close]

BLAST of Carg09040 vs. ExPASy TrEMBL
Match: A0A1S3BWL1 (U3 small nucleolar RNA-associated protein 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494245 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 191/209 (91.39%), Postives = 201/209 (96.17%), Query Frame = 0


Query: 22  SQQDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYF 81
           S  DINGFFNRYCNNFEGKV+LLCEYKGILPKVVLQVRQVYERF++DS+ADVDDARLEYF
Sbjct: 503 SNPDINGFFNRYCNNFEGKVKLLCEYKGILPKVVLQVRQVYERFDSDSLADVDDARLEYF 562

Query: 82  SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFF 141
           SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLK QNASFCLLGEYTKQSDISRARNWFF
Sbjct: 563 SKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKAQNASFCLLGEYTKQSDISRARNWFF 622

Query: 142 EGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSENMTCRVIFSP 201
           EGKRKIMLYTERAHFYHRYKIRGIQ+LIMYS PERKEFYPEIVNMLD S+NMTCRV+FSP
Sbjct: 623 EGKRKIMLYTERAHFYHRYKIRGIQNLIMYSPPERKEFYPEIVNMLDESQNMTCRVLFSP 682

Query: 202 FDHLRLERIVGTVPAKRMGTSDKNVFVFC 231
           FD LRLERIVGTVPAK+M TS+K VF+FC
Sbjct: 683 FDQLRLERIVGTVPAKKMTTSEKKVFIFC 711

[Close]

BLAST of Carg09040 vs. TAIR 10
Match: AT1G17690.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). )

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-80
Identity = 141/207 (68.12%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 25  DINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIADVDDARLEYFSKK 84
           ++N  F R+C N++GK+++ CEYKG+L KV+L VRQ+YERF+A SI  VDDARLEYF+KK
Sbjct: 548 EMNSLFGRHCLNYKGKMKMACEYKGVLEKVLLPVRQIYERFDAASITQVDDARLEYFTKK 607

Query: 85  VFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGK 144
           +FPKI +S QGGVM+FI SYFEFVR+RNFL  QN SFCLLG+Y K +DISRAR  FF G 
Sbjct: 608 IFPKIKDSVQGGVMIFIHSYFEFVRLRNFLNTQNTSFCLLGDYAKNADISRAREQFFVGS 667

Query: 145 RKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNML-DGSENMTCRVIFSPFD 204
           RKIMLYTERA+FY RYKIRGI++LI+YSLPERKEFYPEI+NML +GS +M    +FS FD
Sbjct: 668 RKIMLYTERAYFYKRYKIRGIKNLILYSLPERKEFYPEIMNMLEEGSHDMMSTALFSRFD 727

Query: 205 HLRLERIVGTVPAKRMGTSDKNVFVFC 231
            L+LERIVG+  AKRM TS+KN+F FC
Sbjct: 728 MLQLERIVGSTSAKRMITSEKNMFAFC 754

The following BLAST results are available for this feature:

BLAST of Carg09040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021710.1	3.6e-128	100.00	Digestive organ expansion factor-like protein, partial [Cucurbita argyrosperma s...	[more]
XP_022930084.1	2.7e-115	99.04	U3 small nucleolar RNA-associated protein 25 isoform X1 [Cucurbita moschata]	[more]
XP_022930086.1	2.7e-115	99.04	U3 small nucleolar RNA-associated protein 25 isoform X2 [Cucurbita moschata]	[more]
KAG6587740.1	7.8e-115	98.56	hypothetical protein SDJN03_16305, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531649.1	2.3e-114	98.09	U3 small nucleolar RNA-associated protein 25 isoform X1 [Cucurbita pepo subsp. p...	[more]

BLAST of Carg09040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q68CQ4	1.8e-42	40.48	U3 small nucleolar RNA-associated protein 25 homolog OS=Homo sapiens OX=9606 GN=...	[more]
Q642T7	9.1e-42	40.28	U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=83...	[more]
O74974	1.7e-40	38.79	U3 small nucleolar RNA-associated protein 25 OS=Schizosaccharomyces pombe (strai...	[more]
Q8BTT6	3.8e-40	39.05	U3 small nucleolar RNA-associated protein 25 homolog OS=Mus musculus OX=10090 GN...	[more]
Q5M9G7	8.5e-40	38.57	U3 small nucleolar RNA-associated protein 25 homolog OS=Rattus norvegicus OX=101...	[more]

BLAST of Carg09040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQL5	1.3e-115	99.04	U3 small nucleolar RNA-associated protein 25 isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1EPX7	1.3e-115	99.04	U3 small nucleolar RNA-associated protein 25 isoform X2 OS=Cucurbita moschata OX...	[more]
A0A6J1HN95	5.4e-114	97.61	U3 small nucleolar RNA-associated protein 25 isoform X2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1HJW3	5.4e-114	97.61	U3 small nucleolar RNA-associated protein 25 isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A1S3BWL1	1.7e-107	91.39	U3 small nucleolar RNA-associated protein 25 isoform X1 OS=Cucumis melo OX=3656 ...	[more]

BLAST of Carg09040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17690.1	2.3e-80	68.12	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010678	U3 small nucleolar RNA-associated protein 25	PFAM	PF06862	UTP25	coord: 22..229 e-value: 5.2E-73 score: 246.4
IPR010678	U3 small nucleolar RNA-associated protein 25	PANTHER	PTHR12933	ORF PROTEIN-RELATED	coord: 22..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09040-RA	Carg09040-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0034511	U3 snoRNA binding