Carg09034 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGTAATTCTTATTATTTGAAGTTAATGTTGCGATATTGAAGGTCCAGGAGACGGAATTTAGAGTATGATTTTAGTGTTTTTGCTTGTGGAGGTACACAAGAACTCCTCTAGGGAAATTGATGAGTTGTTGAATGATCGAATTTTGTGATTTCAGCAGTGTTTTAGCCCTATTGCTTCATGTGTTGCCATTGTTCCTTTTCTTTTTTGTTGTTGCCATTATTGGTAACAAGGGGAGACATGTTTATGAATCTTAGTACTCTCACTGTCTTGTCTTGTGATTTTCTTCTCTAACATAATGTTCTTCTGTATTTGCTTCTTCAAAGTTGGTTTTCTTGTCAAATTTGACGACTATCTCTGCGACAGTCCACTGCCAGTAAATTTAGACTTTCCCTCGAGGTTTTTAAACGTGTATACTAGGAAAAAGTTTCTACACCCTCATAAGAAATGCTTCAGGACTTTCCCTTTCAAGCTTATTGTCTTTTTTGAGCTTTCCTTCCTAGGCTTCCCGTTAATATTCTAAAACACGTCTCCTAGGGAGAGGTCTACACCCTTATAAGAAATGTTTTGTTCCCCTCTCTAACCGATGTTAGACCTCACTGCTAGAGAGATTTCTAGACCCTTATAAGAAATGCTTCGTTCCCCTCTCCAATCGATGTGGGATCTTTTAAGTCACCCCTTTTGGGGGCCAGCGTCCTCACTAGCACACCTTTCGGTGTCTGGCTCTAATACCATTTGTAACAGTACGAGGCTACTCCGTCTCTATTAGGGAGTCTTATAAGGAATGCTTCATTTCTCTCTTCAACCGACGTGCCATCTCTTTTGTATGCTCTCCACATGAATATGAATATGTGCAAAAATGTATAATAATCATTTGTTTGTGAGAATTGTGTTCTTGGTTGGGACATCGAGGGAAAGAACAGAACAAAAAGAATAAAATTAGTGGCAAACCTTTGCTTCATAGCTTAAATATTTCTTCCATGCAGCTTTTTTTTTTTTTTTTTTTTTTTTTCTGTAAACAATCAAAACATAAAGTTTTTGGTGCAATTTTGCAGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGTATGCATCTGCTCAAATTCATTAGTACTTCAATTTCATATTCTTGTGTATTCTTTTCTAAAATTTAGTGTTATTTCTCCTAATTCTTGAACATTTATACTCGTTCATTTCGCTTATCCATAGTCTATTTTTTTGGCCTTTTCATAATTGAAACAACCATAATAATTTATTGAAACTGCACACAAAGTAACTTTGAAGCGAACTTTCACTACCATTACATGAAATAACTTTGAAGTCAAGTGTCTATGTAACAGCCCAAGTTTACGCTAGCACATATTGTCCTCTTTAGGTTTTCCCTTCTAAGCTTTTCCTCAAAGTTTTTAAAACGCGTCTATTAGGGAGAGGTTTCTACACCCTCATAAAGAATATTTTGTTCCCCTCTCCAACCGATGTGAGATCTGACCAACCGATGTAACTTATCATTGAGTACATTTATTTTCATCGAATACATGGGTTAACTTGTGGAACCTATCTGTTGAGAAAGAAAAGTAGGATGAAGAGGCTAACCGTGCTGCGGACGTGTGATCAAAGTTAGCACTTATGCTTCTATAGAGTAAAGGGAAGCAATAATATATAAATTTCTTGCTTGCCTTTGCTGAATTCTATGATTTAGTGCTTGAACAAGAACCATATAGGTTCTTATTGCAAGGGAAGTGGGGAACTAATAGTAGTTCCTGTTATATAAAGTAAGTCCTGGAAACATCTTCAACCAACATAGTTTTCAAAACTCTGGGGGGAAAGTCCAGAGAAAAACCACAAAAAGAAGGATCAAATCTCTTGTTAGTAGGTGGACCGGAGGACTATCTCGGATGATAAGCAAGCCAGATACTGCGCGCGGAACACCCACAAAAAAGACCAATGTGTACGGTGAGAATGTGTGGGCTGCCCGATGGGAGGTGAGATTGTGAGATCCCCACCGTTAGTTGAGGAGAAGGGAATGTTAGCATTTATAACAATAAAAGGGTCGAAAGACCTACATCCAAACAGACCGTTTTAAAAAATCCCAGTCAGAGGAGAGAAAGCCAATGAAATGAATTCAACTATGTGTATATGAGATGTTGAATCATAGCATTCTTCTGTTACTGCAGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACATGTTTGGTTTTGTTTTGATATCACCTTTTGTTGCTATCCAGACATCAAAATCTCTCATCCTTGATAATGTTATGTAGGAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACATGAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACATGAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDSYQNTNL Homology
BLAST of Carg09034 vs. NCBI nr
Match: KAG7021716.1 (hypothetical protein SDJN02_15443, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 247.3 bits (630), Expect = 7.1e-62 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Carg09034 vs. NCBI nr
Match: KAG6587745.1 (hypothetical protein SDJN03_16310, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 170.2 bits (430), Expect = 1.1e-38 Identity = 93/126 (73.81%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of Carg09034 vs. NCBI nr
Match: XP_022930193.1 (myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_022930194.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_022930196.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_023007095.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima] >XP_023007098.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima] >XP_023007106.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima]) HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37 Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of Carg09034 vs. NCBI nr
Match: XP_023530480.1 (uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530481.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530482.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 2.5e-35 Identity = 88/126 (69.84%), Postives = 96/126 (76.19%), Query Frame = 0
BLAST of Carg09034 vs. NCBI nr
Match: KAA0058264.1 (uncharacterized protein E6C27_scaffold274G005900 [Cucumis melo var. makuwa]) HSP 1 Score: 154.5 bits (389), Expect = 6.3e-34 Identity = 92/167 (55.09%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of Carg09034 vs. ExPASy TrEMBL
Match: A0A6J1KZL1 (myb-related transcription factor, partner of profilin-like OS=Cucurbita maxima OX=3661 GN=LOC111499689 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.7e-38 Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of Carg09034 vs. ExPASy TrEMBL
Match: A0A6J1EQV9 (myb-related transcription factor, partner of profilin-like OS=Cucurbita moschata OX=3662 GN=LOC111436698 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.7e-38 Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of Carg09034 vs. ExPASy TrEMBL
Match: A0A5A7USX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005900 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 3.0e-34 Identity = 92/167 (55.09%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of Carg09034 vs. ExPASy TrEMBL
Match: A0A5D3CIQ6 (Wiskott-Aldrich syndrome protein family member 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00300 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.8e-32 Identity = 91/183 (49.73%), Postives = 97/183 (53.01%), Query Frame = 0
BLAST of Carg09034 vs. ExPASy TrEMBL
Match: A0A1S3BXF0 (uncharacterized protein LOC103494256 OS=Cucumis melo OX=3656 GN=LOC103494256 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 8.3e-32 Identity = 81/126 (64.29%), Postives = 91/126 (72.22%), Query Frame = 0
BLAST of Carg09034 vs. TAIR 10
Match: AT2G18910.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 84.3 bits (207), Expect = 7.4e-17 Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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