Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCTTTCCCCCATTTCTTTCTTCCAGCTCAAAACCATACACAGACACAGACACTCACACTCAAGCTTTCTCCCCTTGCCCGTTAGGGTTCCTGATTTCTTCATCTTCTTCCCTCTTTCGCTTCCCGCCTTGCTGAAGCACTGCCATGGATAGATACCAGAAGGTCGAGAAACCTAAGCCTGAATCTCCGATAAACGAAAATGAAATCCGCATCACCAGCCAAGGCGCTATCCGAAACTACATCACTTATGCTTCCACCCTACTGCAGGTACCATGTCACTGTTTCTTTGATGGATTCTCATTATCTATTGTATTTCATTTCGTCTTTTGTTGGAGTATCTTTGTTTTATTCTTTCTACTGATTTTTCGTAATGCTGAATCTGTCTTATGAGGTTAGGTTTCTGAGTGTGGATTGTGGATACATGAGACGTATTAGTCAAGTTTTAGGATATTTTCTTGGTTTCTATTAGTTTTTGCATTTTCTTTTTGTAATGTTAGTCGGCATTTGTTGAGTTGGTATATTGCTGGTGTATTGATTTCGTTTCTTCTACTTGTGATTTCTGAGGGATGTTTGCTCGCTGGCTGACGCTTTGCCGTAATTTGCATTGACTGTGAAAGTGTCTGTTAGTTTAATGCACGAGTTATGGTACATCGTAATCTGCGATAGCTCGTTAGATGTCATCAGTTCTGATTGATTATCTACAGTCCTTATAGTTTTTTCTTAAGTCATCGATCATGTGGAGGTAGGTGTTTCTGTATTAACTTGACGTGATTTTTGGCTCAGGTTTCTTCCGGTTGTATACATTTTTTCAATGTGTAAATTGACCGTCAAGATACATTACGTTATTGTTTTTCTTATAAAAAGAATCACATACACTACAGCTCATGTTATACATTGTAATATCATGGAGTTTGGTGTTTCTCTATTATATTGGCTTGATTTTTTGGATCATAGATTTTTTTCAATTTGTATATTTCTAATTTTTTATTAGAAGAATTTAATTATTAATGTTATTCATCGGATCAAGTTTAATGTTCCATTGTTATATGTGCAATTAGTTGATGATTTCAATTGCTATTTTTTTTATTCAGGCTAGACTTGGATTGCAAAGCTTAGCTATATTTAATTGTTTATTCAGACATATTTCTAAGCGTGTTGCTCAAGTGAGAATGTACCTTTTATGTTTTGGTTTAATATATCACATTTTTCACTCATCCAGGACAAACGTGTTAGAGAGATAGTCTTGAAAGCCATGGGGCAGGCAATCAGTAAAGGTGTTGCCATTGCAGAAATTTTGAAGGTTTGAGTTCTTTACGTTCTGCAACTGTGCATGTTTAATATTTTATACTCAGCAGGCCAGTTTCATCCTCTAACAGAAGCGAACTCCACGATTGCATCAAGAAACTTCCATCAGCTCAGTGAGCATAACTGATGTATGGGAACCTATTGAAGAAGGTCTTATACCGTAAGTTTTTTAATATCTAGGATTCTCTGTTAATTGCCTAATAATGACCTATGCACTTCCTGCGGGTTGGTTTCTTTATGCTTGTATGCACAACTTTGCATTGTGTGGCTTCGTACTCTTTAGTTTGCAATTGCAGATTTTTTTATTGCTGCGAGAATGTAGCTTTATCATACTGTTCTGCAGATGTTTAACAAATAATCTCTGAGATATCTGCAGCGTGGAGATGACTCGCCATGTCTCAATGATATCAATTACCTTATCAAATCGAGAGCTAAATAAAAACGCTCCTGGGTATGATAATCTAGTCCTTAATGTACTGCTTTCCATTTTTTGTGCTGAAGTTTCTTTACGAGTGTTTAAGAATAAAAAAATGTTATTATTTGTAGGTACCAAGCTCCACATGTTGTGGAACAGCCAAAGCAACAATATAATCTGCAGCAGCAACAGCAACAGCAACAGCCAAGACAGTCTCGTCCTTATTACAATGCTATTAATGAAGGTGATAGTTCAATCTGAAAACGATTTATTGTTTATTTGTGAAAATGTTATATCTTCCACCCTACATAGTGCGGCAACAATACATAAAAAAAAGGCATGGAAACAGAATCAAGAGAATTTAGAATTCTTGGGATCCACCATACGCCATTTCGTAAGTAAAGAAATCAAATATTTAAGGTTAAATCTTCTTGAGCTTCCAGTATCTCATTACCAACCTTCCCTTAAAAACAGGCGCCCAAACCCCCCGGGGGGGTTGATCCCAGTGAATTTGAGCTTTGGGATGTTAGGGCAGGACTAGATGTTGGTTGAAGGTTTGAAATACTGGGTGGGAATCTGTAGGAAAGGAATCAGTTGATGTTACTGGAGAATGACGTAGTTTCATACAATAAACACAAACCACACAAATCTCCCCCCGAGATTGGCCACACCCAATCGATTCTAATTCATTGGGAAGGTCAAGTCTGTGCCTGGACAATCTATAAACAATGTTGAATGGAGACTGAACTATTAACTGTTGGATTATGGTTCTCTCATACTTGAACTCTGAGACATTCCTGCACATATAGCAGATCCATATGGCCAAAGCCGAGGTCGTGGTAGAGGGAGGGGACGTGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGGAGGATATGGCAACTACCAGGGTGGATATGGAAACTACCAGGGTGGATATGGCAACTACCAAGGCGGATCTGGTAACGGCTACCAAGGTGGATCTGGTAACGGCTACCAAGGTGGATCTGGCGACAACTATCAAGGTGAATATGTTTTCCTCTTTCATTTTCATTCACGCTAATCCTTGAGTACAGCCTAATATATAGTTTCTATTTTTTTGTCAACATAGATAATGGTGGGTACTCAAACTGGGGTAGAGGAGGTGGGCGAGGCAGAGGTTGGGCATATCGTGGTAAGTTTCTTTCACAACTTTCTTTTTCTTTTCAGAATCGTTTGTTGATTAGTGAGGCCAGGCAACTGTCATTTTGCTGACTTCGTTGATGTTTGGTGCCACCAAATTATTGTTAAGCTCTTGTGATCTTTACTTTAAAGATTTCTTAGAACAGAGAGATGAAACAATGATGTGGTTAGTATGGATCGAGTTAAGTTGTTTGAATCAATTGCATTCCTTTCAGGATCTGGCTATGATAGAGGCAGAGGGGGTAGGGGTTACATTCGAGGTCGGGGGCGGATGGGTGGACGAACAAGGGGCGGTGGTGTCGGTAGAAACCAGGCTTAGTTAAAAAGTTATTCGTTCTTTTTACTTGAGCTAAATGCTTTGCCTTGGCCAGTAAAGATGCTTTTTATCTGAATATAATGTTTTTAATAGCGTGGAAATTTGGCTTCTTAGAGCGTTGTTGAGCAGTAATTTCTTCTTTTGCCTGTGGTAATGTGGTGGGCAAGGTTGTTTTTGTTTATGTTTTGCATTTAGCTTTATAAGAGCAGTCAGTTCGGTTCATTCAGTGTAATTTGTTTTTTTTT
mRNA sequence
CTCCTTTCCCCCATTTCTTTCTTCCAGCTCAAAACCATACACAGACACAGACACTCACACTCAAGCTTTCTCCCCTTGCCCGTTAGGGTTCCTGATTTCTTCATCTTCTTCCCTCTTTCGCTTCCCGCCTTGCTGAAGCACTGCCATGGATAGATACCAGAAGGTCGAGAAACCTAAGCCTGAATCTCCGATAAACGAAAATGAAATCCGCATCACCAGCCAAGGCGCTATCCGAAACTACATCACTTATGCTTCCACCCTACTGCAGGACAAACGTGTTAGAGAGATAGTCTTGAAAGCCATGGGGCAGGCAATCAGTAAAGGTGTTGCCATTGCAGAAATTTTGAAGAAGCGAACTCCACGATTGCATCAAGAAACTTCCATCAGCTCAGTGAGCATAACTGATGTATGGGAACCTATTGAAGAAGGTCTTATACCCGTGGAGATGACTCGCCATGTCTCAATGATATCAATTACCTTATCAAATCGAGAGCTAAATAAAAACGCTCCTGGGTACCAAGCTCCACATGTTGTGGAACAGCCAAAGCAACAATATAATCTGCAGCAGCAACAGCAACAGCAACAGCCAAGACAGTCTCGTCCTTATTACAATGCTATTAATGAAGATCCATATGGCCAAAGCCGAGGTCGTGGTAGAGGGAGGGGACGTGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGGAGGATATGGCAACTACCAGGGTGGATATGGAAACTACCAGGGTGGATATGGCAACTACCAAGGCGGATCTGGTAACGGCTACCAAGGTGGATCTGGTAACGGCTACCAAGGTGGATCTGGCGACAACTATCAAGATAATGGTGGGTACTCAAACTGGGGTAGAGGAGGTGGGCGAGGCAGAGGTTGGGCATATCGTGGATCTGGCTATGATAGAGGCAGAGGGGGTAGGGGTTACATTCGAGGTCGGGGGCGGATGGGTGGACGAACAAGGGGCGGTGGTGTCGGTAGAAACCAGGCTTAGTTAAAAAGTTATTCGTTCTTTTTACTTGAGCTAAATGCTTTGCCTTGGCCAGTAAAGATGCTTTTTATCTGAATATAATGTTTTTAATAGCGTGGAAATTTGGCTTCTTAGAGCGTTGTTGAGCAGTAATTTCTTCTTTTGCCTGTGGTAATGTGGTGGGCAAGGTTGTTTTTGTTTATGTTTTGCATTTAGCTTTATAAGAGCAGTCAGTTCGGTTCATTCAGTGTAATTTGTTTTTTTTT
Coding sequence (CDS)
ATGGATAGATACCAGAAGGTCGAGAAACCTAAGCCTGAATCTCCGATAAACGAAAATGAAATCCGCATCACCAGCCAAGGCGCTATCCGAAACTACATCACTTATGCTTCCACCCTACTGCAGGACAAACGTGTTAGAGAGATAGTCTTGAAAGCCATGGGGCAGGCAATCAGTAAAGGTGTTGCCATTGCAGAAATTTTGAAGAAGCGAACTCCACGATTGCATCAAGAAACTTCCATCAGCTCAGTGAGCATAACTGATGTATGGGAACCTATTGAAGAAGGTCTTATACCCGTGGAGATGACTCGCCATGTCTCAATGATATCAATTACCTTATCAAATCGAGAGCTAAATAAAAACGCTCCTGGGTACCAAGCTCCACATGTTGTGGAACAGCCAAAGCAACAATATAATCTGCAGCAGCAACAGCAACAGCAACAGCCAAGACAGTCTCGTCCTTATTACAATGCTATTAATGAAGATCCATATGGCCAAAGCCGAGGTCGTGGTAGAGGGAGGGGACGTGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGGAGGATATGGCAACTACCAGGGTGGATATGGAAACTACCAGGGTGGATATGGCAACTACCAAGGCGGATCTGGTAACGGCTACCAAGGTGGATCTGGTAACGGCTACCAAGGTGGATCTGGCGACAACTATCAAGATAATGGTGGGTACTCAAACTGGGGTAGAGGAGGTGGGCGAGGCAGAGGTTGGGCATATCGTGGATCTGGCTATGATAGAGGCAGAGGGGGTAGGGGTTACATTCGAGGTCGGGGGCGGATGGGTGGACGAACAAGGGGCGGTGGTGTCGGTAGAAACCAGGCTTAG
Protein sequence
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKGVAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKNAPGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA
Homology
BLAST of Carg08910 vs. NCBI nr
Match:
KAG7036262.1 (Ribonuclease P protein subunit p25-like protein [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 525.8 bits (1353), Expect = 2.4e-145
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG
Sbjct: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG
Sbjct: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
Query: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA
Sbjct: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 286
BLAST of Carg08910 vs. NCBI nr
Match:
XP_022930955.1 (glycine-rich RNA-binding protein 10-like [Cucurbita moschata])
HSP 1 Score: 519.6 bits (1337), Expect = 1.7e-143
Identity = 284/286 (99.30%), Postives = 285/286 (99.65%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG
Sbjct: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG
Sbjct: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN YQGGSGNGYQGGSGDNYQDNGGYSNWG
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN-YQGGSGNGYQGGSGDNYQDNGGYSNWG 240
Query: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
RGGGRGRGWAYRGSGYDRGRGGRGY+RGRGRMGGRTRGGGVGRNQA
Sbjct: 241 RGGGRGRGWAYRGSGYDRGRGGRGYVRGRGRMGGRTRGGGVGRNQA 285
BLAST of Carg08910 vs. NCBI nr
Match:
XP_022995596.1 (protein FAM98A-like [Cucurbita maxima])
HSP 1 Score: 503.8 bits (1296), Expect = 9.6e-139
Identity = 279/286 (97.55%), Postives = 282/286 (98.60%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPI+ENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG
Sbjct: 1 MDRYQKVEKPKPESPISENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
APGYQAP+VVEQPKQQYNL QQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG
Sbjct: 121 APGYQAPNVVEQPKQQYNL--QQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN YQGGSGNGYQGGSGDNYQDNGG+SNWG
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN-YQGGSGNGYQGGSGDNYQDNGGFSNWG 240
Query: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRG GVGRNQA
Sbjct: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGSGVGRNQA 283
BLAST of Carg08910 vs. NCBI nr
Match:
KAG6606323.1 (Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138
Identity = 277/286 (96.85%), Postives = 277/286 (96.85%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG
Sbjct: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG
Sbjct: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
GYGNYQGGYGNYQGGYGNYQGG GN YQGGSGNGYQGGSGDNYQDNGGYSNWG
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGSGN--------YQGGSGNGYQGGSGDNYQDNGGYSNWG 240
Query: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA
Sbjct: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 278
BLAST of Carg08910 vs. NCBI nr
Match:
XP_023533405.1 (keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 501.9 bits (1291), Expect = 3.6e-138
Identity = 282/293 (96.25%), Postives = 283/293 (96.59%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG
Sbjct: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTR+VSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRYVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGR- 180
APGYQAPHVVEQPKQQYNL QQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGR
Sbjct: 121 APGYQAPHVVEQPKQQYNL--QQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 ------GGYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDN 240
GGYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNG QGGSGNGYQGGSGDNYQDN
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNG-QGGSGNGYQGGSGDNYQDN 240
Query: 241 GGYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
GGYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA
Sbjct: 241 GGYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 290
BLAST of Carg08910 vs. ExPASy TrEMBL
Match:
A0A6J1EY76 (glycine-rich RNA-binding protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437293 PE=4 SV=1)
HSP 1 Score: 519.6 bits (1337), Expect = 8.2e-144
Identity = 284/286 (99.30%), Postives = 285/286 (99.65%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG
Sbjct: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG
Sbjct: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN YQGGSGNGYQGGSGDNYQDNGGYSNWG
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN-YQGGSGNGYQGGSGDNYQDNGGYSNWG 240
Query: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
RGGGRGRGWAYRGSGYDRGRGGRGY+RGRGRMGGRTRGGGVGRNQA
Sbjct: 241 RGGGRGRGWAYRGSGYDRGRGGRGYVRGRGRMGGRTRGGGVGRNQA 285
BLAST of Carg08910 vs. ExPASy TrEMBL
Match:
A0A6J1K2C9 (protein FAM98A-like OS=Cucurbita maxima OX=3661 GN=LOC111491085 PE=4 SV=1)
HSP 1 Score: 503.8 bits (1296), Expect = 4.6e-139
Identity = 279/286 (97.55%), Postives = 282/286 (98.60%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPI+ENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG
Sbjct: 1 MDRYQKVEKPKPESPISENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
APGYQAP+VVEQPKQQYNL QQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG
Sbjct: 121 APGYQAPNVVEQPKQQYNL--QQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN YQGGSGNGYQGGSGDNYQDNGG+SNWG
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGN-YQGGSGNGYQGGSGDNYQDNGGFSNWG 240
Query: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRG GVGRNQA
Sbjct: 241 RGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGSGVGRNQA 283
BLAST of Carg08910 vs. ExPASy TrEMBL
Match:
A0A6J1E011 (protein FAM98A-like OS=Momordica charantia OX=3673 GN=LOC111026164 PE=4 SV=1)
HSP 1 Score: 464.9 bits (1195), Expect = 2.4e-127
Identity = 263/293 (89.76%), Postives = 270/293 (92.15%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPE PINENEIRITSQGAIRNYITYASTLLQDKRVREIV KAMGQAISK
Sbjct: 1 MDRYQKVEKPKPEYPINENEIRITSQGAIRNYITYASTLLQDKRVREIVFKAMGQAISKA 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGL+PVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
+PGYQAPH VEQPKQQ+N QQQQQQQPRQ+RPYYNA+NEDPYGQSRGRGRGRGRGWGRG
Sbjct: 121 SPGYQAPHFVEQPKQQFN-YQQQQQQQPRQARPYYNAVNEDPYGQSRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNY-------QGGSGNGYQGGSGNGYQGGSGDNYQDN 240
GYGNYQGGYGNYQGGYG+YQGGYG Y QGGSGN QGGSGN YQGGSG YQDN
Sbjct: 181 GYGNYQGGYGNYQGGYGHYQGGYGQYQGGSGNCQGGSGNYQQGGSGNNYQGGSG-YYQDN 240
Query: 241 GGYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTRGGGVGRNQA 287
GGYSNWGRGGGRGRGW YRG+GYDRGRGGRGY RGRGRMGGRTRGGG GR QA
Sbjct: 241 GGYSNWGRGGGRGRGWTYRGTGYDRGRGGRGYGRGRGRMGGRTRGGGAGRTQA 291
BLAST of Carg08910 vs. ExPASy TrEMBL
Match:
A0A6J1E3H2 (ribonuclease P protein subunit p25-like protein OS=Momordica charantia OX=3673 GN=LOC111026142 PE=4 SV=1)
HSP 1 Score: 427.9 bits (1099), Expect = 3.2e-116
Identity = 247/291 (84.88%), Postives = 258/291 (88.66%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQ+KRVREIVLKAMGQAISK
Sbjct: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAIAEILKKR RLHQET+ISSVSITDVWEPIEEGL+PVEMTRHVSMISITLSNRELNKN
Sbjct: 61 VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
+PGYQAPH VEQPKQQYN QQQQ Q QPRQ R Y+NA+NEDPYGQ RGRGRGRGRGWGRG
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQQQLQPQPRQPRTYHNAVNEDPYGQGRGRGRGRGRGWGRG 180
Query: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNGGYSNWG 240
GYGNYQGGYGNYQGGYG+YQGGYG+YQGG N YQGG G YQDNGGYSNWG
Sbjct: 181 GYGNYQGGYGNYQGGYGHYQGGYGHYQGGPDN---------YQGGPGGYYQDNGGYSNWG 240
Query: 241 RGGGRGR-GWAYRGSGYDRGR--GGRGYIRGRGRMGGRTRG--GGVGRNQA 287
RGGGR R GWAYRG+GY+RGR GGRGY RGRGRMGGRTRG GG G +QA
Sbjct: 241 RGGGRSRGGWAYRGAGYERGRGGGGRGYGRGRGRMGGRTRGGSGGGGGDQA 282
BLAST of Carg08910 vs. ExPASy TrEMBL
Match:
A0A6J1HFQ0 (protein FAM98A isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463892 PE=4 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 4.2e-116
Identity = 251/293 (85.67%), Postives = 264/293 (90.10%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISK
Sbjct: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKT 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
V+IAEILKKRTP+LHQETSISSVSI DVWEPIEEGL+PVEMTRHVSMISITLSNRELNK+
Sbjct: 61 VSIAEILKKRTPQLHQETSISSVSIIDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKD 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGR--GRGRGWG 180
+PGYQAP VEQPKQQY +QQQQQQPRQSRPYYNA+NEDPYGQSRGRGR GRGRGWG
Sbjct: 121 SPGYQAPQFVEQPKQQY---KQQQQQQPRQSRPYYNAVNEDPYGQSRGRGRGGGRGRGWG 180
Query: 181 RGGYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGS----GDNYQDNG 240
RGGYGNYQGGYGNYQGGYG+YQGGYG+YQGG G+ YQGGSG GYQGG NYQDNG
Sbjct: 181 RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGYGH-YQGGSG-GYQGGGPGGYQGNYQDNG 240
Query: 241 GYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGR--MGGRTRGGGVGRNQ 286
GYSNW RGGGRGRGW YRG+GYDRGRGGRGY RGRGR + G+TR G RNQ
Sbjct: 241 GYSNWSRGGGRGRGWTYRGTGYDRGRGGRGYGRGRGRGQIDGQTRDNGGSRNQ 288
BLAST of Carg08910 vs. TAIR 10
Match:
AT3G07030.1 (Alba DNA/RNA-binding protein )
HSP 1 Score: 202.2 bits (513), Expect = 5.5e-52
Identity = 186/414 (44.93%), Postives = 214/414 (51.69%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MDRYQ+V KPKPESPINENEIRITS+G IRNYI+YA++LLQ+K V++IVLKAMGQAISK
Sbjct: 1 MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
VAI+EILK + P LHQ+ +ISS+SITDVWEP EEGL PVE+TRHVSMISITLS ELNK+
Sbjct: 61 VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINE-------------------- 180
+PGYQAP +Q K QY Q QQ RQ+R YNA E
Sbjct: 121 SPGYQAPAQSDQSKPQY------QPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMETTK 180
Query: 181 ------------------------------------------------------------ 240
Sbjct: 181 GVMKEKTKGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRGGYGGGRDGGYGGGRDDG 240
Query: 241 ------DPYGQSR----------GRGRGRGRGWGRG---GYGNYQGGY-----GNYQGGY 287
D YG+ R G G GR G+G G GYG +GG+ G GY
Sbjct: 241 YGERRNDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGGGRDEGY 300
BLAST of Carg08910 vs. TAIR 10
Match:
AT1G76010.1 (Alba DNA/RNA-binding protein )
HSP 1 Score: 164.1 bits (414), Expect = 1.7e-40
Identity = 154/334 (46.11%), Postives = 184/334 (55.09%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MD+YQ+V KPK ++PI+ NEIRITSQG RNYITYA TLLQDK E+V KAMG+AI+K
Sbjct: 1 MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
V I E++K+R P LHQ TSI S ITD WEP EEGL+P+E TRHVSMI+ITLS ELN +
Sbjct: 61 VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQP------------------RQSRPYYNAINED- 180
+ GYQ P +E K ++ + ++ P + Y N +ED
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHEDG 180
Query: 181 ------PYGQSRGRGRGR-GRGWGRGGYGN--------YQGGYG----------NYQGGY 240
YG+ RGRGRGR RG GRGGY GGYG + +GGY
Sbjct: 181 GWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHRGYDDRGGY 240
Query: 241 GNYQGGYGNYQGGSG-NGYQGGSG-NGY------QGGSGDNYQDNGGYSNWGRGGGRGRG 283
G G Y G G GY G G GY +GG Q GGY +G G G
Sbjct: 241 DAPPQGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGYDGPSQGRGGYDGPSQGRGGYDG 300
BLAST of Carg08910 vs. TAIR 10
Match:
AT1G20220.1 (Alba DNA/RNA-binding protein )
HSP 1 Score: 154.8 bits (390), Expect = 1.0e-37
Identity = 147/326 (45.09%), Postives = 176/326 (53.99%), Query Frame = 0
Query: 1 MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60
MD+YQ+VEKPK ++PI ENEIRITS G RNYITYA LLQ+ + E++ KAMG+AI+K
Sbjct: 1 MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60
Query: 61 VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120
V I E++K+R P LHQ TSI S ITD WEP EEGL +E TRHVSMI+ITLS +LN +
Sbjct: 61 VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120
Query: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180
+ GYQ P +E K + + Q PR G RGRG GRGRG GRG
Sbjct: 121 SVGYQCPIPIEMVKPLAEIDYEGQDGSPRGR------------GGRRGRG-GRGRGRGRG 180
Query: 181 GYGN------YQGGYGNYQGGYGNYQGGYGNYQGGSGNGYQGGSGNGYQGGSGDNYQDNG 240
G GN Y G G +GG GN GY N + G +GG G+GY + Y D G
Sbjct: 181 GRGNGPANVEYDDG-GRGRGGRGN---GYVNNEYDDGGRGRGGRGSGY---VNNEYNDGG 240
Query: 241 GYS--NWGRGGGRGRGWAYRGSGYDRGRGG------------------------------ 283
++GRG GRGRG G RGRGG
Sbjct: 241 MEQDRSYGRGRGRGRG----GGRGGRGRGGYNGPPPPYYEAQQDGGDYGYNNVAPPADHG 300
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7036262.1 | 2.4e-145 | 100.00 | Ribonuclease P protein subunit p25-like protein [Cucurbita argyrosperma subsp. a... | [more] |
XP_022930955.1 | 1.7e-143 | 99.30 | glycine-rich RNA-binding protein 10-like [Cucurbita moschata] | [more] |
XP_022995596.1 | 9.6e-139 | 97.55 | protein FAM98A-like [Cucurbita maxima] | [more] |
KAG6606323.1 | 2.1e-138 | 96.85 | Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma... | [more] |
XP_023533405.1 | 3.6e-138 | 96.25 | keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EY76 | 8.2e-144 | 99.30 | glycine-rich RNA-binding protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111... | [more] |
A0A6J1K2C9 | 4.6e-139 | 97.55 | protein FAM98A-like OS=Cucurbita maxima OX=3661 GN=LOC111491085 PE=4 SV=1 | [more] |
A0A6J1E011 | 2.4e-127 | 89.76 | protein FAM98A-like OS=Momordica charantia OX=3673 GN=LOC111026164 PE=4 SV=1 | [more] |
A0A6J1E3H2 | 3.2e-116 | 84.88 | ribonuclease P protein subunit p25-like protein OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1HFQ0 | 4.2e-116 | 85.67 | protein FAM98A isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463892 PE=4 SV=... | [more] |