Sequences
The following sequences are available for this feature:
Legend: polypeptide exon CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGTGAGTTTATAAGCGAGGATGAGAAGACCAGCCGCGTGAATGGTTTCACTCGCGATGAACAAGTAATTATGATTCGTAACCGTGTGCTTCAAAACAAACATCGCAGCCACCGCCGCCGCCACCGCAAGACCGATCTTCGCCGCCGTGGATCTCCGCCTCAGCCAATCGCCCGCGGCCTGGAACGCTCTCCTCCTATTCGGACGCCTCTTCGACTCATCGCCGTCGCTCGTGGTCGGAACCCTACCGGAACCGAAACTGATCGG ATTTGGTGGATGAAATGGTCCGGATTTGTTCTTAAATGTTGA AAATGCGACGATCTGATGG
ATGAGTGGTGAGTTTATAAGCGAGGATGAGAAGACCAGCCGCGTGAATGGTTTCACTCGCGATGAACAAGTAATTATGATTCGTAACCGTGTGCTTCAAAACAAACATCGCAGCCACCGCCGCCGCCACCGCAAGACCGATCTTCGCCGCCGTGGATCTCCGCCTCAGCCAATCGCCCGCGGCCTGGAACGCTCTCCTCCTATTCGGACGCCTCTTCGACTCATCGCCGTCGCTCGTGGTCGGAACCCTACCGGAACCGAAACTGATCGGATTTGGTGGATGAAATGGTCCGGATTTGTTCTTAAATGTTGAAAATGCGACGATCTGATGG
ATGAGTGGTGAGTTTATAAGCGAGGATGAGAAGACCAGCCGCGTGAATGGTTTCACTCGCGATGAACAAGTAATTATGATTCGTAACCGTGTGCTTCAAAACAAACATCGCAGCCACCGCCGCCGCCACCGCAAGACCGATCTTCGCCGCCGTGGATCTCCGCCTCAGCCAATCGCCCGCGGCCTGGAACGCTCTCCTCCTATTCGGACGCCTCTTCGACTCATCGCCGTCGCTCGTGGTCGGAACCCTACCGGAACCGAAACTGATCGGATTTGGTGGATGAAATGGTCCGGATTTGTTCTTAAATGTTGA
MSGEFISEDEKTSRVNGFTRDEQVIMIRNRVLQNKHRSHRRRHRKTDLRRRGSPPQPIARGLERSPPIRTPLRLIAVARGRNPTGTETDRIWWMKWSGFVLKC
Homology
BLAST of Carg08888 vs. NCBI nr
Match:
KAG6606303.1 (hypothetical protein SDJN03_03620, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036241.1 hypothetical protein SDJN02_03043, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 210.3 bits (534), Expect = 7.9e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Carg08888 vs. NCBI nr
Match:
KAG6571596.1 (hypothetical protein SDJN03_28324, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 89.0 bits (219), Expect = 2.6e-14
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAG6606303.1 7.9e-51 100.00 hypothetical protein SDJN03_03620, partial [Cucurbita argyrosperma subsp. sorori... [more] KAG6571596.1 2.6e-14 58.62 hypothetical protein SDJN03_28324, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
A T G A G T G G T G A G T T T A T A A G C G A G G A T G A G A A G A C C A G C C G C G T G A A T G G T T T C A C T C G C G A T G A A C A A G T A A T T A T G A T T C G T A A C C G T G T G C T T C A A A A C A A A C A T C G C A G C C A C C G C C G C C G C C A C C G C A A G A C C G A T C T T C G C C G C C G T G G A T C T C C G C C T C A G C C A A T C G C C C G C G G C C T G G A A C G C T C T C C T C C T A T T C G G A C G C C T C T T C G A C T C A T C G C C G T C G C T C G T G G T C G G A A C C C T A C C G G A A C C G A A A C T G A T C G G A T T T G G T G G A T G A A A T G G T C C G G A T T T G T T C T T A A A T G T T G A A A A T G C G A C G A T C T G A T G G 50 100 150 200 250 300 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 32..67 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 32..49
Relationships
The following mRNA feature(s) are a part of this gene:
