Homology
BLAST of Carg08883 vs. NCBI nr
Match:
KAG7036236.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 798.1 bits (2060), Expect = 3.4e-227
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP 60
MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP
Sbjct: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP 60
Query: 61 IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND
Sbjct: 61 IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
Query: 121 LTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
LTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK
Sbjct: 121 LTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
Query: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM 240
KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM
Sbjct: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM 240
Query: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG
Sbjct: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
Query: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF
Sbjct: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
Query: 361 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
DLLDELKKRDKLMNEKTFNILLNGLHIVGRE
Sbjct: 361 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 391
BLAST of Carg08883 vs. NCBI nr
Match:
KAG6606296.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 788.9 bits (2036), Expect = 2.0e-224
Identity = 387/388 (99.74%), Postives = 387/388 (99.74%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP 60
MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP
Sbjct: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP 60
Query: 61 IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND
Sbjct: 61 IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
Query: 121 LTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
LTYLTIIKILICC RYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK
Sbjct: 121 LTYLTIIKILICCLRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
Query: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM 240
KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM
Sbjct: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM 240
Query: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG
Sbjct: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
Query: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF
Sbjct: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
Query: 361 DLLDELKKRDKLMNEKTFNILLNGLHIV 389
DLLDELKKRDKLMNEKTFNILLNGLHIV
Sbjct: 361 DLLDELKKRDKLMNEKTFNILLNGLHIV 388
BLAST of Carg08883 vs. NCBI nr
Match:
XP_022931079.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita moschata])
HSP 1 Score: 785.8 bits (2028), Expect = 1.7e-223
Identity = 386/391 (98.72%), Postives = 387/391 (98.98%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP 60
MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPS STVLPPQTPENFDLP
Sbjct: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSPSTVLPPQTPENFDLP 60
Query: 61 IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
I KVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND
Sbjct: 61 IQKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
Query: 121 LTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
LTYLTIIKILIC R+YHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK
Sbjct: 121 LTYLTIIKILICRRKYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
Query: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM 240
KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSL KQMKSSGVIPDTFVLNM
Sbjct: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVLNM 240
Query: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG
Sbjct: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
Query: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF
Sbjct: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
Query: 361 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
DLLDELKKRDKLMNEKTFNILLNGLHIVGRE
Sbjct: 361 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 391
BLAST of Carg08883 vs. NCBI nr
Match:
XP_023532709.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 781.6 bits (2017), Expect = 3.3e-222
Identity = 383/391 (97.95%), Postives = 385/391 (98.47%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP 60
MIGKFLRP+LSASRKRNPLS FQSLPNP+LPYNLHRRSLCSPS STVLPPQTPENFDLP
Sbjct: 39 MIGKFLRPILSASRKRNPLSPPFQSLPNPVLPYNLHRRSLCSPSPSTVLPPQTPENFDLP 98
Query: 61 IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
I KVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND
Sbjct: 99 IQKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 158
Query: 121 LTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
LTYLTIIKILIC RRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK
Sbjct: 159 LTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 218
Query: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM 240
KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSL KQMKSSGVIPDTFVLNM
Sbjct: 219 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVLNM 278
Query: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG
Sbjct: 279 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 338
Query: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF
Sbjct: 339 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 398
Query: 361 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
DLLDELKKRDKLMNEKTFNILLNGLHIVGRE
Sbjct: 399 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 429
BLAST of Carg08883 vs. NCBI nr
Match:
XP_022995354.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita maxima])
HSP 1 Score: 760.8 bits (1963), Expect = 5.9e-216
Identity = 378/393 (96.18%), Postives = 381/393 (96.95%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLC--SPSASTVLPPQTPENFD 60
MIGKFLRPVLSASRKRNPLSS FQSLPNPILPYNLHRRSLC SPS STVLP Q PENF
Sbjct: 1 MIGKFLRPVLSASRKRNPLSSPFQSLPNPILPYNLHRRSLCSPSPSPSTVLPSQPPENFS 60
Query: 61 LPIPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
LPI KVRSQTPLEKQFETW+QKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61 LPIQKVRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
Query: 121 NDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 180
NDLTYLTIIKILIC RRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGR+FLFNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRRFLFNRAFDV 180
Query: 181 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVL 240
YKKMWKSDDCKPNLETYAMLFN+LLRRFNKLNVCYVYLHSVRSL KQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240
Query: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300
NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300
Query: 301 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360
KGL PSSSTYMILICSLAME RFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD
Sbjct: 301 KGLSPSSSTYMILICSLAMEGRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360
Query: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 393
BLAST of Carg08883 vs. ExPASy Swiss-Prot
Match:
Q9LSF5 (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)
HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-135
Identity = 237/367 (64.58%), Postives = 294/367 (80.11%), Query Frame = 0
Query: 24 QSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLPIPKVRSQTPLEKQFETWIQKLKP 83
++L P L ++ SL S S+ +PE+ P ++R++TPLE QFETWIQ LKP
Sbjct: 18 RNLSPPFLSTAVNHLSLSFSSVSS-----SPESHTSP-SRIRTRTPLETQFETWIQNLKP 77
Query: 84 GFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNDLTYLTIIKILICCRRYHLAETLV 143
GF+ SDV AL+AQSDPDLALD+FRWTAQQRGYKHN Y T+IK I +R + ETL+
Sbjct: 78 GFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLI 137
Query: 144 EEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYKKMWKSDDCKPNLETYAMLFNTLL 203
EEV+AGACEMSVPLYN +IRFCCGRKFLFNRAFDVY KM +SDD KP+LETY +L ++LL
Sbjct: 138 EEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLL 197
Query: 204 RRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNMIIKAFSKCLEVDEAIRVFREMGL 263
+RFNKLNVCYVYLH+VRSL KQMKS+GVIPDTFVLNMIIKA++KCLEVDEAIRVF+EM L
Sbjct: 198 KRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMAL 257
Query: 264 YGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKGLFPSSSTYMILICSLAMECRFDE 323
YG EPNAYTY Y+ KG+CEKGRVGQGL FYKEM+VKG+ P+ S YM+LICSL+ME R DE
Sbjct: 258 YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDE 317
Query: 324 AIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAFDLLDELKKRDKLMNEKTFNILLN 383
A+EV +DML+ S +PDMLTY T+L LCR GR S+A ++++E KKRD +M E+ + L++
Sbjct: 318 AVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 377
Query: 384 GLHIVGR 391
++ + +
Sbjct: 378 EVYFLNK 378
BLAST of Carg08883 vs. ExPASy Swiss-Prot
Match:
Q9ZUY1 (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)
HSP 1 Score: 208.0 bits (528), Expect = 1.9e-52
Identity = 109/317 (34.38%), Postives = 187/317 (58.99%), Query Frame = 0
Query: 73 QFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNDLTYLTIIKILIC 132
+F I KL P F+P ++ +A+ + DP L LF W +QQ + H + +Y I+ L
Sbjct: 125 KFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGA 184
Query: 133 CRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYKKM--WKSDDCKP 192
+ Y + +V +VL+ + LYNS+I F + RA ++++ M K+ +C+P
Sbjct: 185 AKMYQEMDDIVNQVLSVRHIGNENLYNSII-FYFTKAGKLIRAVNIFRHMVTSKNLECRP 244
Query: 193 NLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNMIIKAFSKCLE 252
+ TY +LF LL R N + +VY+ +VRSL +QM SG+ PD F LN ++K + L
Sbjct: 245 TIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH 304
Query: 253 VDEAIRVFREMG-LYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKGLFPSSSTYM 312
V++A+R+F +M +Y CEPN++TY Y+ GLC +GR E EM+ KG P+ +Y
Sbjct: 305 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 364
Query: 313 ILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAFDLLDELKKR 372
L+ + A+ D+A++ ++M+ R D ++YRTL++ CR+G+ +A LL+ L+++
Sbjct: 365 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 424
Query: 373 DKLMNEKTFNILLNGLH 387
+L++ +++ L+N LH
Sbjct: 425 -QLVDRDSYDKLVNVLH 439
BLAST of Carg08883 vs. ExPASy Swiss-Prot
Match:
Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 1.2e-30
Identity = 92/312 (29.49%), Postives = 156/312 (50.00%), Query Frame = 0
Query: 80 KLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQ--RGYKHNDLTYLTIIKILICCRRYH 139
K +PS V + ++A+ D + ++ +F + GY H+ ++ ++ L+ ++
Sbjct: 9 KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68
Query: 140 LAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFD---VYKKMWKSDDCKPNLET 199
AE L+ + C +S + S+ R GR +R FD V+ KM K DC P+ +
Sbjct: 69 AAEDLIVRMKIENCVVSEDILLSICR-GYGR---VHRPFDSLRVFHKM-KDFDCDPSQKA 128
Query: 200 YAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNMIIKAFSK-CLEVDE 259
Y + L+ N+LN+ + + K M+ G+ P LN++IKA + VD
Sbjct: 129 YVTVLAILVEE-NQLNLAFKFY-------KNMREIGLPPTVASLNVLIKALCRNDGTVDA 188
Query: 260 AIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKGLFPSSSTYMILIC 319
+++F EM GC+P++YTYG + GLC GR+ + + + EM K P+ TY LI
Sbjct: 189 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 248
Query: 320 SLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAFDLLDELKKRDKLM 379
L DEA+ +M S P++ TY +L++GLC++GR A +L + + R
Sbjct: 249 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 307
Query: 380 NEKTFNILLNGL 386
N T+ L+ GL
Sbjct: 309 NMVTYTTLITGL 307
BLAST of Carg08883 vs. ExPASy Swiss-Prot
Match:
P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 1.0e-29
Identity = 88/340 (25.88%), Postives = 153/340 (45.00%), Query Frame = 0
Query: 94 LQAQSDPDLALDLFRWTAQQRGYKHNDLTYLTIIKILICCRRYHLAETLVEEVLAGACEM 153
++ + DP LA F+W+ + G+KH+ +Y + IL C R Y+ A ++++E++ +
Sbjct: 116 VELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC 175
Query: 154 SV-PLYNSVIRFCCGRKFLFNRAFDV---------------------------------- 213
V + S C +F+ F V
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 214 -YKKMWKSDDCK------------PNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQ 273
+ K+ K+DD K P + TY ++ + + + + + + R L ++
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD--------VEAARGLFEE 295
Query: 274 MKSSGVIPDTFVLNMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGR 333
MK G++PDT N +I F K +D+ + F EM CEP+ TY + C+ G+
Sbjct: 296 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 355
Query: 334 VGQGLEFYKEMRVKGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRT 386
+ GLEFY+EM+ GL P+ +Y L+ + E +AI+ DM P+ TY +
Sbjct: 356 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 415
BLAST of Carg08883 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 9.7e-28
Identity = 83/278 (29.86%), Postives = 138/278 (49.64%), Query Frame = 0
Query: 115 GYKHNDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNR 174
G + N +T+ I++ + R+ AE L+ ++L SV +N +I F C RK L R
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC-RKGLLGR 363
Query: 175 AFDVYKKMWKSDDCKPNLETYAMLFNTLLRRF---NKLNVCYVYLHSVRSLAKQMKSSGV 234
A D+ +KM C+PN ++ +N LL F K++ YL ++M S G
Sbjct: 364 AIDILEKM-PQHGCQPN----SLSYNPLLHGFCKEKKMDRAIEYL-------ERMVSRGC 423
Query: 235 IPDTFVLNMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLE 294
PD N ++ A K +V++A+ + ++ GC P TY + GL + G+ G+ ++
Sbjct: 424 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 483
Query: 295 FYKEMRVKGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLC 354
EMR K L P + TY L+ L+ E + DEAI+ + P+ +T+ +++ GLC
Sbjct: 484 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 543
Query: 355 REGRDSDAFDLLDELKKRDKLMNEKTFNILLNGLHIVG 390
+ + A D L + R NE ++ IL+ GL G
Sbjct: 544 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
BLAST of Carg08883 vs. ExPASy TrEMBL
Match:
A0A6J1ETB4 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437373 PE=4 SV=1)
HSP 1 Score: 785.8 bits (2028), Expect = 8.3e-224
Identity = 386/391 (98.72%), Postives = 387/391 (98.98%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLP 60
MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPS STVLPPQTPENFDLP
Sbjct: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSPSTVLPPQTPENFDLP 60
Query: 61 IPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
I KVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND
Sbjct: 61 IQKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHND 120
Query: 121 LTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
LTYLTIIKILIC R+YHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK
Sbjct: 121 LTYLTIIKILICRRKYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYK 180
Query: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNM 240
KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSL KQMKSSGVIPDTFVLNM
Sbjct: 181 KMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVLNM 240
Query: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG
Sbjct: 241 IIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKG 300
Query: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF
Sbjct: 301 LFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAF 360
Query: 361 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
DLLDELKKRDKLMNEKTFNILLNGLHIVGRE
Sbjct: 361 DLLDELKKRDKLMNEKTFNILLNGLHIVGRE 391
BLAST of Carg08883 vs. ExPASy TrEMBL
Match:
A0A6J1K5G5 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111490928 PE=4 SV=1)
HSP 1 Score: 760.8 bits (1963), Expect = 2.9e-216
Identity = 378/393 (96.18%), Postives = 381/393 (96.95%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLC--SPSASTVLPPQTPENFD 60
MIGKFLRPVLSASRKRNPLSS FQSLPNPILPYNLHRRSLC SPS STVLP Q PENF
Sbjct: 1 MIGKFLRPVLSASRKRNPLSSPFQSLPNPILPYNLHRRSLCSPSPSPSTVLPSQPPENFS 60
Query: 61 LPIPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
LPI KVRSQTPLEKQFETW+QKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH
Sbjct: 61 LPIQKVRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
Query: 121 NDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 180
NDLTYLTIIKILIC RRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGR+FLFNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRRFLFNRAFDV 180
Query: 181 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVL 240
YKKMWKSDDCKPNLETYAMLFN+LLRRFNKLNVCYVYLHSVRSL KQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240
Query: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300
NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300
Query: 301 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360
KGL PSSSTYMILICSLAME RFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD
Sbjct: 301 KGLSPSSSTYMILICSLAMEGRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360
Query: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 393
BLAST of Carg08883 vs. ExPASy TrEMBL
Match:
A0A5D3DR42 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00350 PE=4 SV=1)
HSP 1 Score: 676.0 bits (1743), Expect = 9.3e-191
Identity = 332/393 (84.48%), Postives = 359/393 (91.35%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLC--SPSASTVLPPQTPENFD 60
M+GKFLRP++S+SR + SS FQSL NPILP +LH R LC SP +S LPPQ +N +
Sbjct: 1 MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
Query: 61 LPIPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
LPIPKVR+QTPLEKQFE+W+QKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61 LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
Query: 121 NDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 180
NDLTYLTIIKILI CRRYHLA+TLVEEV+AGACEMSVPLYNSVIRFCCGRK FNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
Query: 181 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVL 240
YKKMWKSDDCKP LETYAMLFN+LLRRFNKLNV YVYLHSVRSL KQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
Query: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300
NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV +GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
Query: 301 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360
+GL PSSSTYMILICSLAME RF+EAIE+CFDML S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
Query: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
AFDLLDEL+KRDKLM+EKTF ILLNGLH VGR+
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 393
BLAST of Carg08883 vs. ExPASy TrEMBL
Match:
A0A1S4E2S7 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499230 PE=4 SV=1)
HSP 1 Score: 676.0 bits (1743), Expect = 9.3e-191
Identity = 332/393 (84.48%), Postives = 359/393 (91.35%), Query Frame = 0
Query: 1 MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLC--SPSASTVLPPQTPENFD 60
M+GKFLRP++S+SR + SS FQSL NPILP +LH R LC SP +S LPPQ +N +
Sbjct: 1 MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
Query: 61 LPIPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120
LPIPKVR+QTPLEKQFE+W+QKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61 LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
Query: 121 NDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 180
NDLTYLTIIKILI CRRYHLA+TLVEEV+AGACEMSVPLYNSVIRFCCGRK FNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
Query: 181 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVL 240
YKKMWKSDDCKP LETYAMLFN+LLRRFNKLNV YVYLHSVRSL KQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
Query: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300
NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV +GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
Query: 301 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360
+GL PSSSTYMILICSLAME RF+EAIE+CFDML S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
Query: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
AFDLLDEL+KRDKLM+EKTF ILLNGLH VGR+
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 393
BLAST of Carg08883 vs. ExPASy TrEMBL
Match:
A0A6J1DTM6 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024295 PE=4 SV=1)
HSP 1 Score: 675.2 bits (1741), Expect = 1.6e-190
Identity = 336/398 (84.42%), Postives = 359/398 (90.20%), Query Frame = 0
Query: 1 MIGKFL-RPVLSASRKRNPLSSLFQSLP------NPILPYNLHRRSLCSPSASTVLPPQT 60
M+GK L RP+LS+SR N LSS FQS P NP+L LHRR LCSPS+ T
Sbjct: 1 MLGKLLRRPLLSSSRICNHLSSPFQSFPPHRSIQNPVLLITLHRRFLCSPSSPT------ 60
Query: 61 PENFDLPIPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQ 120
EN DLPIP++RSQTPLEKQFE+W+QKLKPGFS SDV+EAL+AQSDPDLALDLFRWTAQQ
Sbjct: 61 -ENLDLPIPRIRSQTPLEKQFESWVQKLKPGFSHSDVDEALRAQSDPDLALDLFRWTAQQ 120
Query: 121 RGYKHNDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFN 180
RGYKHNDLTYLTIIK LI CRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFN
Sbjct: 121 RGYKHNDLTYLTIIKTLISCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFN 180
Query: 181 RAFDVYKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIP 240
RAFDVYKKMW+SDDCKPNLETYAMLFN+LLRRFNKLNVCYVYLH+VRSL KQMK+SGVIP
Sbjct: 181 RAFDVYKKMWRSDDCKPNLETYAMLFNSLLRRFNKLNVCYVYLHAVRSLTKQMKASGVIP 240
Query: 241 DTFVLNMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFY 300
DTFV+NMIIKA+SKCLEVDEAIRVFREMGLYGCEPN YTYGYIAKGLCEKGRV QGL+FY
Sbjct: 241 DTFVMNMIIKAYSKCLEVDEAIRVFREMGLYGCEPNTYTYGYIAKGLCEKGRVAQGLDFY 300
Query: 301 KEMRVKGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCRE 360
KEMRVKGLFPSSST MILICSLAME RF EA+EVCFDMLS S +PD+LTYRTLLEGLCRE
Sbjct: 301 KEMRVKGLFPSSSTCMILICSLAMERRFKEAVEVCFDMLSNSMSPDLLTYRTLLEGLCRE 360
Query: 361 GRDSDAFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 392
G+D +AFDLLDELKKRDKLMNEKTF ILLNGLHIVGRE
Sbjct: 361 GQDGEAFDLLDELKKRDKLMNEKTFKILLNGLHIVGRE 391
BLAST of Carg08883 vs. TAIR 10
Match:
AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 484.6 bits (1246), Expect = 7.7e-137
Identity = 237/367 (64.58%), Postives = 294/367 (80.11%), Query Frame = 0
Query: 24 QSLPNPILPYNLHRRSLCSPSASTVLPPQTPENFDLPIPKVRSQTPLEKQFETWIQKLKP 83
++L P L ++ SL S S+ +PE+ P ++R++TPLE QFETWIQ LKP
Sbjct: 18 RNLSPPFLSTAVNHLSLSFSSVSS-----SPESHTSP-SRIRTRTPLETQFETWIQNLKP 77
Query: 84 GFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNDLTYLTIIKILICCRRYHLAETLV 143
GF+ SDV AL+AQSDPDLALD+FRWTAQQRGYKHN Y T+IK I +R + ETL+
Sbjct: 78 GFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLI 137
Query: 144 EEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYKKMWKSDDCKPNLETYAMLFNTLL 203
EEV+AGACEMSVPLYN +IRFCCGRKFLFNRAFDVY KM +SDD KP+LETY +L ++LL
Sbjct: 138 EEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLL 197
Query: 204 RRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNMIIKAFSKCLEVDEAIRVFREMGL 263
+RFNKLNVCYVYLH+VRSL KQMKS+GVIPDTFVLNMIIKA++KCLEVDEAIRVF+EM L
Sbjct: 198 KRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMAL 257
Query: 264 YGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKGLFPSSSTYMILICSLAMECRFDE 323
YG EPNAYTY Y+ KG+CEKGRVGQGL FYKEM+VKG+ P+ S YM+LICSL+ME R DE
Sbjct: 258 YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDE 317
Query: 324 AIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAFDLLDELKKRDKLMNEKTFNILLN 383
A+EV +DML+ S +PDMLTY T+L LCR GR S+A ++++E KKRD +M E+ + L++
Sbjct: 318 AVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 377
Query: 384 GLHIVGR 391
++ + +
Sbjct: 378 EVYFLNK 378
BLAST of Carg08883 vs. TAIR 10
Match:
AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 208.0 bits (528), Expect = 1.4e-53
Identity = 109/317 (34.38%), Postives = 187/317 (58.99%), Query Frame = 0
Query: 73 QFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNDLTYLTIIKILIC 132
+F I KL P F+P ++ +A+ + DP L LF W +QQ + H + +Y I+ L
Sbjct: 125 KFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGA 184
Query: 133 CRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDVYKKM--WKSDDCKP 192
+ Y + +V +VL+ + LYNS+I F + RA ++++ M K+ +C+P
Sbjct: 185 AKMYQEMDDIVNQVLSVRHIGNENLYNSII-FYFTKAGKLIRAVNIFRHMVTSKNLECRP 244
Query: 193 NLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNMIIKAFSKCLE 252
+ TY +LF LL R N + +VY+ +VRSL +QM SG+ PD F LN ++K + L
Sbjct: 245 TIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH 304
Query: 253 VDEAIRVFREMG-LYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKGLFPSSSTYM 312
V++A+R+F +M +Y CEPN++TY Y+ GLC +GR E EM+ KG P+ +Y
Sbjct: 305 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 364
Query: 313 ILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAFDLLDELKKR 372
L+ + A+ D+A++ ++M+ R D ++YRTL++ CR+G+ +A LL+ L+++
Sbjct: 365 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 424
Query: 373 DKLMNEKTFNILLNGLH 387
+L++ +++ L+N LH
Sbjct: 425 -QLVDRDSYDKLVNVLH 439
BLAST of Carg08883 vs. TAIR 10
Match:
AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 135.6 bits (340), Expect = 8.7e-32
Identity = 92/312 (29.49%), Postives = 156/312 (50.00%), Query Frame = 0
Query: 80 KLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQ--RGYKHNDLTYLTIIKILICCRRYH 139
K +PS V + ++A+ D + ++ +F + GY H+ ++ ++ L+ ++
Sbjct: 9 KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68
Query: 140 LAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFD---VYKKMWKSDDCKPNLET 199
AE L+ + C +S + S+ R GR +R FD V+ KM K DC P+ +
Sbjct: 69 AAEDLIVRMKIENCVVSEDILLSICR-GYGR---VHRPFDSLRVFHKM-KDFDCDPSQKA 128
Query: 200 YAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVLNMIIKAFSK-CLEVDE 259
Y + L+ N+LN+ + + K M+ G+ P LN++IKA + VD
Sbjct: 129 YVTVLAILVEE-NQLNLAFKFY-------KNMREIGLPPTVASLNVLIKALCRNDGTVDA 188
Query: 260 AIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRVKGLFPSSSTYMILIC 319
+++F EM GC+P++YTYG + GLC GR+ + + + EM K P+ TY LI
Sbjct: 189 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 248
Query: 320 SLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSDAFDLLDELKKRDKLM 379
L DEA+ +M S P++ TY +L++GLC++GR A +L + + R
Sbjct: 249 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 307
Query: 380 NEKTFNILLNGL 386
N T+ L+ GL
Sbjct: 309 NMVTYTTLITGL 307
BLAST of Carg08883 vs. TAIR 10
Match:
AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 132.5 bits (332), Expect = 7.4e-31
Identity = 88/340 (25.88%), Postives = 153/340 (45.00%), Query Frame = 0
Query: 94 LQAQSDPDLALDLFRWTAQQRGYKHNDLTYLTIIKILICCRRYHLAETLVEEVLAGACEM 153
++ + DP LA F+W+ + G+KH+ +Y + IL C R Y+ A ++++E++ +
Sbjct: 116 VELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC 175
Query: 154 SV-PLYNSVIRFCCGRKFLFNRAFDV---------------------------------- 213
V + S C +F+ F V
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 214 -YKKMWKSDDCK------------PNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQ 273
+ K+ K+DD K P + TY ++ + + + + + + R L ++
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD--------VEAARGLFEE 295
Query: 274 MKSSGVIPDTFVLNMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGR 333
MK G++PDT N +I F K +D+ + F EM CEP+ TY + C+ G+
Sbjct: 296 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 355
Query: 334 VGQGLEFYKEMRVKGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRT 386
+ GLEFY+EM+ GL P+ +Y L+ + E +AI+ DM P+ TY +
Sbjct: 356 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 415
BLAST of Carg08883 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 125.9 bits (315), Expect = 6.9e-29
Identity = 83/278 (29.86%), Postives = 138/278 (49.64%), Query Frame = 0
Query: 115 GYKHNDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNR 174
G + N +T+ I++ + R+ AE L+ ++L SV +N +I F C RK L R
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC-RKGLLGR 363
Query: 175 AFDVYKKMWKSDDCKPNLETYAMLFNTLLRRF---NKLNVCYVYLHSVRSLAKQMKSSGV 234
A D+ +KM C+PN ++ +N LL F K++ YL ++M S G
Sbjct: 364 AIDILEKM-PQHGCQPN----SLSYNPLLHGFCKEKKMDRAIEYL-------ERMVSRGC 423
Query: 235 IPDTFVLNMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLE 294
PD N ++ A K +V++A+ + ++ GC P TY + GL + G+ G+ ++
Sbjct: 424 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 483
Query: 295 FYKEMRVKGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLC 354
EMR K L P + TY L+ L+ E + DEAI+ + P+ +T+ +++ GLC
Sbjct: 484 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 543
Query: 355 REGRDSDAFDLLDELKKRDKLMNEKTFNILLNGLHIVG 390
+ + A D L + R NE ++ IL+ GL G
Sbjct: 544 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7036236.1 | 3.4e-227 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6606296.1 | 2.0e-224 | 99.74 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022931079.1 | 1.7e-223 | 98.72 | pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita ... | [more] |
XP_023532709.1 | 3.3e-222 | 97.95 | pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita ... | [more] |
XP_022995354.1 | 5.9e-216 | 96.18 | pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9LSF5 | 1.1e-135 | 64.58 | Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop... | [more] |
Q9ZUY1 | 1.9e-52 | 34.38 | Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... | [more] |
Q9FNL2 | 1.2e-30 | 29.49 | Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... | [more] |
P0C894 | 1.0e-29 | 25.88 | Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... | [more] |
Q3EDF8 | 9.7e-28 | 29.86 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ETB4 | 8.3e-224 | 98.72 | pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbit... | [more] |
A0A6J1K5G5 | 2.9e-216 | 96.18 | pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbit... | [more] |
A0A5D3DR42 | 9.3e-191 | 84.48 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4E2S7 | 9.3e-191 | 84.48 | pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucumis ... | [more] |
A0A6J1DTM6 | 1.6e-190 | 84.42 | pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Momordic... | [more] |
Match Name | E-value | Identity | Description | |
AT3G25210.1 | 7.7e-137 | 64.58 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G27800.1 | 1.4e-53 | 34.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G46100.1 | 8.7e-32 | 29.49 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G02150.1 | 7.4e-31 | 25.88 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G09900.1 | 6.9e-29 | 29.86 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |