Carg08875 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08875
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cadmium-induced protein AS8
Location	Carg_Chr02: 9253712 .. 9254811 (-)
RNA-Seq Expression	Carg08875
Synteny	Carg08875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATTCTTTTCTTGTGAATATATTGAATACTGGTGAAATTTTGTCAAAATATCCAAGTTGAAGCTGATATTGGTCATGTATAAGGATTTGGTTGTGTTTAATAGTTTTACTTTTTGACAAGTTATATTGAAGTAGCTCTTTGTCTACAAAATTTCCATATTTTCATCTATACACCAGATAGCGTTGAAAATAGCATGGGTGAAATTCTCAGAACACAAAGACATACATCTCTTCATTTTTTATATTCTTTACTGTGGAGGAAGCATAGAGCTGTTTATAATTGAGTCATTTCAAATACACTGATTGGGTCTGTAAAAGAACATTTGATGATACCATGAGTCCTTTAATGTCTTCAACTAGGTATTGATGATTATAAAAGGCTTATTCCGGAGATACGAAAGATGGAATCCCGTACATCCAACTCTCGGGGCATTTTGGGGGATGGGAATAGGCATGGGTTGTGGTGTTGGATGGGGTCCTGGTTTTGGACCTGAAGTAGTTGGTTATGTTGGTGCTGGATGTGGTCTCGGATTTTGTGTGGGATTCACTGCTGCAGGTCTTGGCATTGGTCTTCCAGCAAATGCGCTTTATCATGTTGCTTACAATGGTATACCATCCTGGCATCTTTGTTGTTATACTCCATTATTCTTTAAACACTATTAATACTAAAATGCTTATTTCATGGAATACACGTGTCGATGCTGCTAAAGAGATTGTTTGACTATTGACTAGCTTCCCAATCGAGTCTTTACTGAAACAGTTGATGGGTTTACTAATTTACAGTTGCCCTGGCCACAAGAAGTGGAGCAGTGGAATTAGTCCAATCCAACAGTCTTCGATCCACAACTTTTTCTGTTTCTAATGGATGGAATGACTTTACACAGCATATATTTGGGCTACAAAGAGAAGCAAGTAGACGATTAACAAACATCAAGCTGGAGTGCTTGGACAAAAAGATTAATTTACCTGATAAGACGATCTTACCAGCCATTCCTACTAAGTCTATTTGTGAAACTGTAGGAACATTAGGTCATCGGCTTTCTCACATTCACAAAGGTAATCCAATATTTTCTCTTTTTGCGTCTTCAACAGGTTGA

mRNA sequence

ATGGTATTGATGATTATAAAAGGCTTATTCCGGAGATACGAAAGATGGAATCCCGTACATCCAACTCTCGGGGCATTTTGGGGGATGGGAATAGGCATGGGTTGTGGTGTTGGATGGGGTCCTGGTTTTGGACCTGAAGTAGTTGGTTATGTTGGTGCTGGATGTGGTCTCGGATTTTGTGTGGGATTCACTGCTGCAGGTCTTGGCATTGGTCTTCCAGCAAATGCGCTTTATCATGTTGCTTACAATGTTGCCCTGGCCACAAGAAGTGGAGCAGTGGAATTAGTCCAATCCAACAGTCTTCGATCCACAACTTTTTCTGTTTCTAATGGATGGAATGACTTTACACAGCATATATTTGGGCTACAAAGAGAAGCAAGTAGACGATTAACAAACATCAAGCTGGAGTGCTTGGACAAAAAGATTAATTTACCTGATAAGACGATCTTACCAGCCATTCCTACTAAGTCTATTTGTGAAACTGTAGGAACATTAGGTCATCGGCTTTCTCACATTCACAAAGGTAATCCAATATTTTCTCTTTTTGCGTCTTCAACAGGTTGA

Coding sequence (CDS)

ATGGTATTGATGATTATAAAAGGCTTATTCCGGAGATACGAAAGATGGAATCCCGTACATCCAACTCTCGGGGCATTTTGGGGGATGGGAATAGGCATGGGTTGTGGTGTTGGATGGGGTCCTGGTTTTGGACCTGAAGTAGTTGGTTATGTTGGTGCTGGATGTGGTCTCGGATTTTGTGTGGGATTCACTGCTGCAGGTCTTGGCATTGGTCTTCCAGCAAATGCGCTTTATCATGTTGCTTACAATGTTGCCCTGGCCACAAGAAGTGGAGCAGTGGAATTAGTCCAATCCAACAGTCTTCGATCCACAACTTTTTCTGTTTCTAATGGATGGAATGACTTTACACAGCATATATTTGGGCTACAAAGAGAAGCAAGTAGACGATTAACAAACATCAAGCTGGAGTGCTTGGACAAAAAGATTAATTTACCTGATAAGACGATCTTACCAGCCATTCCTACTAAGTCTATTTGTGAAACTGTAGGAACATTAGGTCATCGGCTTTCTCACATTCACAAAGGTAATCCAATATTTTCTCTTTTTGCGTCTTCAACAGGTTGA

Protein sequence

MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFCVGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIFGLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGNPIFSLFASSTG

Homology

[Close]

BLAST of Carg08875 vs. NCBI nr
Match: KAG7036228.1 (Cadmium-induced protein AS8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382.1 bits (980), Expect = 2.7e-102
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC
Sbjct: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF
Sbjct: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGNPIFS 180
           GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGNPIFS
Sbjct: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGNPIFS 180

Query: 181 LFASSTG 188
           LFASSTG
Sbjct: 181 LFASSTG 187

[Close]

BLAST of Carg08875 vs. NCBI nr
Match: XP_022930920.1 (cadmium-induced protein AS8 [Cucurbita moschata] >XP_023532478.1 cadmium-induced protein AS8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.0 bits (920), Expect = 2.5e-95
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC
Sbjct: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF
Sbjct: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKG+
Sbjct: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGS 176

[Close]

BLAST of Carg08875 vs. NCBI nr
Match: XP_022995634.1 (cadmium-induced protein AS8 [Cucurbita maxima])

HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MV MIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC
Sbjct: 1   MVYMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF
Sbjct: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQREASRRLTNIKLECLDKKINLPDK ILPAIPTKSICETVGTLGHRLSHIHKG+
Sbjct: 121 GLQREASRRLTNIKLECLDKKINLPDKKILPAIPTKSICETVGTLGHRLSHIHKGS 176

[Close]

BLAST of Carg08875 vs. NCBI nr
Match: XP_038887439.1 (cadmium-induced protein AS8 [Benincasa hispida])

HSP 1 Score: 322.4 bits (825), Expect = 2.6e-84
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MV MIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEV+GYVGAGCGLGFC
Sbjct: 1   MVYMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVIGYVGAGCGLGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPAN LYHV Y+  LATRSGAVEL QSNSLR   FSV NGWNDFTQHIF
Sbjct: 61  VGFTAAGLGIGLPANMLYHVPYSALLATRSGAVELSQSNSLRPIKFSVGNGWNDFTQHIF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQREASRRLTNIK++CLDKKINLPD  ILPAIPT+ ICE++GTLGHRLSH HKG+
Sbjct: 121 GLQREASRRLTNIKVDCLDKKINLPDMKILPAIPTRFICESLGTLGHRLSHFHKGS 176

[Close]

BLAST of Carg08875 vs. NCBI nr
Match: XP_008460433.1 (PREDICTED: cadmium-induced protein AS8 isoform X3 [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-81
Identity = 146/176 (82.95%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MV MIIKGL RRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEV+GYVGAGCG+GFC
Sbjct: 1   MVYMIIKGLIRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVIGYVGAGCGIGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPAN LYH  Y+  LATRSGAVEL QSNSLRS  F +SNGWNDFTQH+F
Sbjct: 61  VGFTAAGLGIGLPANVLYHGPYSALLATRSGAVELSQSNSLRSKNFFISNGWNDFTQHVF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQREA+RRLT+IK++C DKK+NLPD  ILPAIPT+SICE++GTL HRLSH HKG+
Sbjct: 121 GLQREATRRLTSIKVDCTDKKVNLPDMKILPAIPTRSICESLGTLAHRLSHFHKGS 176

[Close]

BLAST of Carg08875 vs. ExPASy Swiss-Prot
Match: P42735 (Cadmium-induced protein AS8 OS=Arabidopsis thaliana OX=3702 GN=At4g19070 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 96/176 (54.55%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MVLMIIKG+FRRYE+WNPVHPT GAFWGMGIG+GCGVGWGPGFGPEV+GYVGAGCG+GF 
Sbjct: 1   MVLMIIKGIFRRYEKWNPVHPTYGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVGFS 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VG T AGLGIGLP N L    YN   ATR GA      N         +NGW+D    I 
Sbjct: 61  VGITLAGLGIGLPTNFLLAAPYNTVEATRKGAFNFFGKN-------LSTNGWSDLMPQIA 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQR+ S   +       +KK +L +   L + P   I    G  G  L H+ KG+
Sbjct: 121 GLQRQVSEICSG-----FNKKPHLNNAIDLKSFPL-FISHDCGKFGSHLLHVRKGS 163

[Close]

BLAST of Carg08875 vs. ExPASy TrEMBL
Match: A0A6J1EY44 (cadmium-induced protein AS8 OS=Cucurbita moschata OX=3662 GN=LOC111437263 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC
Sbjct: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF
Sbjct: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKG+
Sbjct: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGS 176

[Close]

BLAST of Carg08875 vs. ExPASy TrEMBL
Match: A0A6J1K6H1 (cadmium-induced protein AS8 OS=Cucurbita maxima OX=3661 GN=LOC111491110 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.3e-94
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MV MIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC
Sbjct: 1   MVYMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF
Sbjct: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQREASRRLTNIKLECLDKKINLPDK ILPAIPTKSICETVGTLGHRLSHIHKG+
Sbjct: 121 GLQREASRRLTNIKLECLDKKINLPDKKILPAIPTKSICETVGTLGHRLSHIHKGS 176

[Close]

BLAST of Carg08875 vs. ExPASy TrEMBL
Match: A0A1S3CCX6 (cadmium-induced protein AS8 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499243 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 146/176 (82.95%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MV MIIKGL RRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEV+GYVGAGCG+GFC
Sbjct: 1   MVYMIIKGLIRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVIGYVGAGCGIGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPAN LYH  Y+  LATRSGAVEL QSNSLRS  F +SNGWNDFTQH+F
Sbjct: 61  VGFTAAGLGIGLPANVLYHGPYSALLATRSGAVELSQSNSLRSKNFFISNGWNDFTQHVF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQREA+RRLT+IK++C DKK+NLPD  ILPAIPT+SICE++GTL HRLSH HKG+
Sbjct: 121 GLQREATRRLTSIKVDCTDKKVNLPDMKILPAIPTRSICESLGTLAHRLSHFHKGS 176

[Close]

BLAST of Carg08875 vs. ExPASy TrEMBL
Match: A0A1S3CCG3 (cadmium-induced protein AS8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499243 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 146/175 (83.43%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MV MIIKGL RRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEV+GYVGAGCG+GFC
Sbjct: 1   MVYMIIKGLIRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVIGYVGAGCGIGFC 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VGFTAAGLGIGLPAN LYH  Y+  LATRSGAVEL QSNSLRS  F +SNGWNDFTQH+F
Sbjct: 61  VGFTAAGLGIGLPANVLYHGPYSALLATRSGAVELSQSNSLRSKNFFISNGWNDFTQHVF 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKG 176
           GLQREA+RRLT+IK++C DKK+NLPD  ILPAIPT+SICE++GTL HRLSH HKG
Sbjct: 121 GLQREATRRLTSIKVDCTDKKVNLPDMKILPAIPTRSICESLGTLAHRLSHFHKG 175

[Close]

BLAST of Carg08875 vs. ExPASy TrEMBL
Match: A0A1S4E2V3 (cadmium-induced protein AS8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499243 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 144/172 (83.72%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 4   MIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFCVGF 63
           MIIKGL RRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEV+GYVGAGCG+GFCVGF
Sbjct: 1   MIIKGLIRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVIGYVGAGCGIGFCVGF 60

Query: 64  TAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIFGLQ 123
           TAAGLGIGLPAN LYH  Y+  LATRSGAVEL QSNSLRS  F +SNGWNDFTQH+FGLQ
Sbjct: 61  TAAGLGIGLPANVLYHGPYSALLATRSGAVELSQSNSLRSKNFFISNGWNDFTQHVFGLQ 120

Query: 124 REASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKG 176
           REA+RRLT+IK++C DKK+NLPD  ILPAIPT+SICE++GTL HRLSH HKG
Sbjct: 121 REATRRLTSIKVDCTDKKVNLPDMKILPAIPTRSICESLGTLAHRLSHFHKG 172

[Close]

BLAST of Carg08875 vs. TAIR 10
Match: AT4G19070.1 (Putative membrane lipoprotein )

HSP 1 Score: 177.6 bits (449), Expect = 9.6e-45
Identity = 96/176 (54.55%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 1   MVLMIIKGLFRRYERWNPVHPTLGAFWGMGIGMGCGVGWGPGFGPEVVGYVGAGCGLGFC 60
           MVLMIIKG+FRRYE+WNPVHPT GAFWGMGIG+GCGVGWGPGFGPEV+GYVGAGCG+GF 
Sbjct: 1   MVLMIIKGIFRRYEKWNPVHPTYGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVGFS 60

Query: 61  VGFTAAGLGIGLPANALYHVAYNVALATRSGAVELVQSNSLRSTTFSVSNGWNDFTQHIF 120
           VG T AGLGIGLP N L    YN   ATR GA      N         +NGW+D    I 
Sbjct: 61  VGITLAGLGIGLPTNFLLAAPYNTVEATRKGAFNFFGKN-------LSTNGWSDLMPQIA 120

Query: 121 GLQREASRRLTNIKLECLDKKINLPDKTILPAIPTKSICETVGTLGHRLSHIHKGN 177
           GLQR+ S   +       +KK +L +   L + P   I    G  G  L H+ KG+
Sbjct: 121 GLQRQVSEICSG-----FNKKPHLNNAIDLKSFPL-FISHDCGKFGSHLLHVRKGS 163

The following BLAST results are available for this feature:

BLAST of Carg08875 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036228.1	2.7e-102	100.00	Cadmium-induced protein AS8, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022930920.1	2.5e-95	99.43	cadmium-induced protein AS8 [Cucurbita moschata] >XP_023532478.1 cadmium-induced...	[more]
XP_022995634.1	4.7e-94	98.30	cadmium-induced protein AS8 [Cucurbita maxima]	[more]
XP_038887439.1	2.6e-84	87.50	cadmium-induced protein AS8 [Benincasa hispida]	[more]
XP_008460433.1	2.7e-81	82.95	PREDICTED: cadmium-induced protein AS8 isoform X3 [Cucumis melo]	[more]

BLAST of Carg08875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42735	1.3e-43	54.55	Cadmium-induced protein AS8 OS=Arabidopsis thaliana OX=3702 GN=At4g19070 PE=2 SV...	[more]

BLAST of Carg08875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EY44	1.2e-95	99.43	cadmium-induced protein AS8 OS=Cucurbita moschata OX=3662 GN=LOC111437263 PE=4 S...	[more]
A0A6J1K6H1	2.3e-94	98.30	cadmium-induced protein AS8 OS=Cucurbita maxima OX=3661 GN=LOC111491110 PE=4 SV=...	[more]
A0A1S3CCX6	1.3e-81	82.95	cadmium-induced protein AS8 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499243 P...	[more]
A0A1S3CCG3	1.7e-81	83.43	cadmium-induced protein AS8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499243 P...	[more]
A0A1S4E2V3	1.1e-80	83.72	cadmium-induced protein AS8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499243 P...	[more]

BLAST of Carg08875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19070.1	9.6e-45	54.55	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037735	Cadmium-induced protein AS8-like	PANTHER	PTHR36778	CADMIUM-INDUCED PROTEIN AS8	coord: 2..174
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..35 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08875-RA	Carg08875-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032012	regulation of ARF protein signal transduction
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity