Carg08868 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08868
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DEAD-box ATP-dependent RNA helicase 5-like
Location	Carg_Chr02: 9223022 .. 9226732 (-)
RNA-Seq Expression	Carg08868
Synteny	Carg08868

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGAAAGCTCGAAGAGGACTCTACCGTCAGCGAACCGGTTGCCCAAGAGGCTTTTGTGAAATCCGATACGAAAACAGAGAAGAAGAAGAGGAAGAAGAAGAGAGACAGAGAATCGGGTTGTCAAGAGAAGGATGAAGTTAGTCACGAGAAGAATGTAGTGGTGGGAACTGATTCAGAGCTTCACAAGAAGAAGAAAAAGCATAAGAAACCAAAGGATGAAAACGTAAGCATCACAACCTCCGATGAAAAGGAAGTACCGAAGGTGAATGAAAATTCTACCGATGGATCCGTGGTAGTCACTGGTAAAGGTGTAAAGGAGGGAAAGTTCGCACCGCTTAAGTCGTTTGCCGAAGCGGGACTTCCAGATGAAGTATTGGAATGCTGTCGAACTTTCAAAAGTCCATCTCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGATTTTATTGGCATCGCCGCCACTGGATCAGGTAATTTGTTGATTTGGCTATTAGCATTTTATAATGGGATCATAATCTCCATTGTGTAGCCATAGCGGATATTTTAGTTGTTTGTGGTCACAGGCAAGACTCTGGCGTTTGGTGTACCGGGTATTATGCATGTTTTGAACAAGAGAAAGGGCAAGATGCCGAAGGGGCGGAGTCCTCTCTGTCTAGTTCTATCACCTACGAGGGAATTAGCTCAACAAGTACGTTCTCACGAAATTCAACTCACTTGGATTGCATATTGTATTGATAATTTGCATATAGTCTTATATTTCTTTTTTTTTTTTTTTAAATTAGTCTGGACTGTCGTTTGGTTGTACAGTTTTTGTTCTATCTAATAATAATTTAATTCAAGGGAAGTGAGGGAAAAGGTTTTATAGGCAGGACTTTTGGAAGCTTTCTAGGGTTCGATTAATCTCCTATTAGGTTAGAGAAGGGAAACTGGCCTAATGTATCCTCTTAATAATGAGAAATTGGCCAAGCTTTTATCACATGAATGGCTGACGGGTAAACCTTGGTAGGGTTCGATTCGCTATGTAGCCCCTCTGAATGCTATTTTCTTTGTTTATACGTTTTTTCTGGCTTATATTACCTTTAACTTGGGGACGGGGATTGGAACCTTATTAAAATTTTCCATCTCGAGATGAGATTAGTTGCACTTGTAAAGTTAAGTGGAATATATCTAAGCTTGTAATTACCATAAGACATCATCAGTTTTATGTGTTTCGATAGTCTTGCAACGGAGAAGACAATGTCCTTAGATCATAGTAATTGTGTTCATCGCAATGTCAATCTCATGTTGATCTTGCTGTTTTACGAATCAGATTTGTGATTAATTATAGGCTTCATGTGCTATGGCAGATTTCAAGTGTACTTCAAAATGCCGGAGAACCATGTGGTGTGACGTCTACTTGTTTGTATGGAGGTGTCTCCAAAGGAAGCCAAATATCTTGTCTTAAATCTGGTGTTGTATGATGTTTCTGCTTCCTCTTTGTGATTTTGGGACTTTTTTTTTCATGTTGTAGATTACAACCAACCTAGGACAAGCACACATTTTTTTCCCTTAATTTTGTTCACTCTCTCTTTTTTCATACAATCACACATTTATGTTCTTACCCTCAGGACATTGTTATTGGAACTCCTGGACGCTTAAAGGATTTGATGGAAATGGAGATCTGCAGACTCTCGGAAGTGTCCTTTGTGGTATGTGACCAATCTCTTTGGTACCAAAACTTGTATATTCTTAACCTTGGGAGAATGGTCACTTTGAGTTAAATCTATTGATGTCTATCTTTTTTTCTTCTTCTTCTTCTTTTTTTTCTTTTTTTTTTTTTTTGGTTTTGTTTTGTTTTTTTTTTTTTTTTTTTGTTGTTGTTGTTGTTGCTATAATTGCCATGTTGTGCGTTCATGTATGGGTGCAAGGTGTTCATGAAGAAAACATGTGAATTTAACATCTTTATTATTTAGTTGTGTGTAGTCATTAAAAAATGAAGTATTGAAGCACAGTGTAGGATTGCTAATCAGACATGATGCATCTATGTGGGATTCTGTGAACTATAGTATTTAATACCATAGAAATTGAAAATATAATTTGATCCAATTTGGCGAGTTCCTCGGAGGAGGTTTGGTTGAATGTTAGGTTTAGTGTCTCCTTTTGGGTTCAATTTCTAAGGAGTTGTGTTGTTACCCTCTGGTCTTATTATTTTGAATTGGTGCCCCTCTTTTGTTTCTAACTTTAAGTCTTCTTTTGCTGGACTTTCTTTTTGTATGTACCTTCTGCTTCTTTTGTACTCTTTCATTCTCTCTTGGGTCCCTCCCTCCCTTTTACTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTAATAATTTTCTCCCCATGAAAGTTCACAAAAATTCCAAACCTTGTGTCGCGATAAGGTGCTTGAGTTAGAGATGATTACAATTTGGGTATAACTTAAAATAAGAATTAAATTGTGCACTGTAAAGAACTTTGAACCTAGATATATTAACAGTATGCATGCAATCTGTTATTCAAAATTTCGTCATTTCATAAAATGAATTTGAAAGAGAATACTGATTAGCGGCAATAGATTTTGCTGGGTTCAAAATAGTATCTCTGTTCTGCCTTCTCATTGGTTCTATGTTGTGCCTTTTTCTTTTATCTCGATGTGTAATCCTATTAACAAGACAGCTTAAATTCTTATAGGTTCTTGATGAGGCTGATAGAATGTTGGATATGGGATTTGAACCAGAAGTGCGGTCTATATTAAGTCAGACTTGTACAGGTTAATATATTTGGTCTTCATTTGCATTTTTTTTTTACACTCACACACTTTTAAATGACTGTTATATCCTGAGTTTGGTTCTACAAGACTAAAGATTCTGTGGTGCTGTGCACTCATATTAAGCTCCAACTCTTTTGCAGAACGCCAGATGGTTATGTTCAGTGCCACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGACCCAGTAAAGGTGTGCACACTTCGCAATTACTCAATAATATCCTAATTTGTTATTCTTAAACCTTTTAAGATGGAAGTATTTTATGACAGGTGGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTATTCTTTCATATCCAGATGAACTTTATTATAAATTAAACAAAAAGAGTTCAGAATCATTAATCATTCACATGGATAGGTCTTGGATGATCGTGCGCGTGATGATCGTTTAGTTGCTCTGCTTGAAAAATACCATAAATCTCAAAGGTATTTTGAACCTTTCATAAAATTGAAATTATTATAATTAATGATTTGTTCTACATATATGTATCGGAGAATAATGATTTGGCAACAATGGGTTTTTTTTTGTTTCCAGGAACAGAGTATTGGTTTTTGTCTTGTACAAGAATGAAGCTGCACGGGTCGAAAAAATGCTCCAGAGAAGGTAATCTAGATTGGTGTTTACAATTTTGGCTCCTCTGATTCAGAAGGACATGATTTTTAATTCCTAAAGAATGATCTCTCTATTTTTCTGAGCCTTTTTTTCCTCTACTTAAATTCTCTAGGGGTTGGAAGGCTGTTTCTATACATGGTGACAAAGCACAAACTGAACGCACAAAAGCATTGTCATTATTTAAAAGCGGAAGCTATCCATTAATGGTATACATTTGCAAATAA

mRNA sequence

ATGGTTGGAAAGCTCGAAGAGGACTCTACCGTCAGCGAACCGGTTGCCCAAGAGGCTTTTGTGAAATCCGATACGAAAACAGAGAAGAAGAAGAGGAAGAAGAAGAGAGACAGAGAATCGGGTTGTCAAGAGAAGGATGAAGTTAGTCACGAGAAGAATGTAGTGGTGGGAACTGATTCAGAGCTTCACAAGAAGAAGAAAAAGCATAAGAAACCAAAGGATGAAAACGTAAGCATCACAACCTCCGATGAAAAGGAAGTACCGAAGGTGAATGAAAATTCTACCGATGGATCCGTGGTAGTCACTGGTAAAGGTGTAAAGGAGGGAAAGTTCGCACCGCTTAAGTCGTTTGCCGAAGCGGGACTTCCAGATGAAGTATTGGAATGCTGTCGAACTTTCAAAAGTCCATCTCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGATTTTATTGGCATCGCCGCCACTGGATCAGGCAAGACTCTGGCGTTTGGTGTACCGGGTATTATGCATGTTTTGAACAAGAGAAAGGGCAAGATGCCGAAGGGGCGGAGTCCTCTCTGTCTAGTTCTATCACCTACGAGGGAATTAGCTCAACAAATTTCAAGTGTACTTCAAAATGCCGGAGAACCATGTGGTGTGACGTCTACTTGTTTGTATGGAGGTGTCTCCAAAGGAAGCCAAATATCTTGTCTTAAATCTGGTGTTGACATTGTTATTGGAACTCCTGGACGCTTAAAGGATTTGATGGAAATGGAGATCTGCAGACTCTCGGAAGTGTCCTTTGTGGTTCTTGATGAGGCTGATAGAATGTTGGATATGGGATTTGAACCAGAAGTGCGGTCTATATTAAGTCAGACTTGTACAGAACGCCAGATGGTTATGTTCAGTGCCACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGACCCAGTAAAGGTGGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTCTTGGATGATCGTGCGCGTGATGATCGTTTAGTTGCTCTGCTTGAAAAATACCATAAATCTCAAAGGAACAGAGTATTGGTTTTTGTCTTGTACAAGAATGAAGCTGCACGGGTCGAAAAAATGCTCCAGAGAAGGGGTTGGAAGGCTGTTTCTATACATGGTGACAAAGCACAAACTGAACGCACAAAAGCATTGTCATTATTTAAAAGCGGAAGCTATCCATTAATGGTATACATTTGCAAATAA

Coding sequence (CDS)

ATGGTTGGAAAGCTCGAAGAGGACTCTACCGTCAGCGAACCGGTTGCCCAAGAGGCTTTTGTGAAATCCGATACGAAAACAGAGAAGAAGAAGAGGAAGAAGAAGAGAGACAGAGAATCGGGTTGTCAAGAGAAGGATGAAGTTAGTCACGAGAAGAATGTAGTGGTGGGAACTGATTCAGAGCTTCACAAGAAGAAGAAAAAGCATAAGAAACCAAAGGATGAAAACGTAAGCATCACAACCTCCGATGAAAAGGAAGTACCGAAGGTGAATGAAAATTCTACCGATGGATCCGTGGTAGTCACTGGTAAAGGTGTAAAGGAGGGAAAGTTCGCACCGCTTAAGTCGTTTGCCGAAGCGGGACTTCCAGATGAAGTATTGGAATGCTGTCGAACTTTCAAAAGTCCATCTCCTATTCAGTCCCACGCTTGGCCGTTCTTGTTGCATGGTCGAGATTTTATTGGCATCGCCGCCACTGGATCAGGCAAGACTCTGGCGTTTGGTGTACCGGGTATTATGCATGTTTTGAACAAGAGAAAGGGCAAGATGCCGAAGGGGCGGAGTCCTCTCTGTCTAGTTCTATCACCTACGAGGGAATTAGCTCAACAAATTTCAAGTGTACTTCAAAATGCCGGAGAACCATGTGGTGTGACGTCTACTTGTTTGTATGGAGGTGTCTCCAAAGGAAGCCAAATATCTTGTCTTAAATCTGGTGTTGACATTGTTATTGGAACTCCTGGACGCTTAAAGGATTTGATGGAAATGGAGATCTGCAGACTCTCGGAAGTGTCCTTTGTGGTTCTTGATGAGGCTGATAGAATGTTGGATATGGGATTTGAACCAGAAGTGCGGTCTATATTAAGTCAGACTTGTACAGAACGCCAGATGGTTATGTTCAGTGCCACATGGCCTCTACAAGTTAATCAATTGGCTCAAGAATTCATGGATCCTGACCCAGTAAAGGTGGTTGTAGGTTCAGAGGATTTGGCTGCCAATCATGATGTCATGCAAATAGTTGAGGTCTTGGATGATCGTGCGCGTGATGATCGTTTAGTTGCTCTGCTTGAAAAATACCATAAATCTCAAAGGAACAGAGTATTGGTTTTTGTCTTGTACAAGAATGAAGCTGCACGGGTCGAAAAAATGCTCCAGAGAAGGGGTTGGAAGGCTGTTTCTATACATGGTGACAAAGCACAAACTGAACGCACAAAAGCATTGTCATTATTTAAAAGCGGAAGCTATCCATTAATGGTATACATTTGCAAATAA

Protein sequence

MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDSELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMVYICK

Homology

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BLAST of Carg08868 vs. NCBI nr
Match: KAG7036221.1 (DEAD-box ATP-dependent RNA helicase 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 820.5 bits (2118), Expect = 6.8e-234
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS
Sbjct: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120
           ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA
Sbjct: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120

Query: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180
           GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK
Sbjct: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180

Query: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240
           GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD
Sbjct: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240

Query: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300
           IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS
Sbjct: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300

Query: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360
           ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK
Sbjct: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360

Query: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMVYI 420
           SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMVYI
Sbjct: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMVYI 420

Query: 421 CK 423
           CK
Sbjct: 421 CK 422

[Close]

BLAST of Carg08868 vs. NCBI nr
Match: KAG6606281.1 (DEAD-box ATP-dependent RNA helicase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 807.4 bits (2084), Expect = 6.0e-230
Identity = 415/418 (99.28%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           MVGKLEEDSTVS+PVAQE FVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS
Sbjct: 1   MVGKLEEDSTVSKPVAQEVFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120
           ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA
Sbjct: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120

Query: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180
           GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK
Sbjct: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180

Query: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240
           GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD
Sbjct: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240

Query: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300
           IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS
Sbjct: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300

Query: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360
           ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK
Sbjct: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360

Query: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM+
Sbjct: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMI 418

[Close]

BLAST of Carg08868 vs. NCBI nr
Match: XP_023534620.1 (DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 794.3 bits (2050), Expect = 5.2e-226
Identity = 409/418 (97.85%), Postives = 412/418 (98.56%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           MVGKLEEDS VSEPVAQE FVKSDTKTEKKKRKKKRDRESGCQEKDE+SHEKNV+ GTDS
Sbjct: 1   MVGKLEEDSAVSEPVAQEVFVKSDTKTEKKKRKKKRDRESGCQEKDEISHEKNVLEGTDS 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120
           EL KKKKKHKK KDENV ITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA
Sbjct: 61  ELPKKKKKHKKSKDENVRITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120

Query: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180
           GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK
Sbjct: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180

Query: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240
           GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD
Sbjct: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240

Query: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300
           IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS
Sbjct: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300

Query: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360
           ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK
Sbjct: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360

Query: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM+
Sbjct: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMI 418

[Close]

BLAST of Carg08868 vs. NCBI nr
Match: XP_022931231.1 (DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita moschata])

HSP 1 Score: 791.6 bits (2043), Expect = 3.4e-225
Identity = 409/418 (97.85%), Postives = 412/418 (98.56%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           MVGKLEEDSTVSEPVAQE FVKSDTKTE    KKKRDRESGCQEKDEVSHEKNV+VGTDS
Sbjct: 1   MVGKLEEDSTVSEPVAQEVFVKSDTKTE----KKKRDRESGCQEKDEVSHEKNVLVGTDS 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120
           ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKE KFAPLKSFAEA
Sbjct: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKERKFAPLKSFAEA 120

Query: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180
           GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK
Sbjct: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180

Query: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240
           GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD
Sbjct: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240

Query: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300
           IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS
Sbjct: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300

Query: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360
           ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDV+QIVEVLDDRARDDRLVALLEKYHK
Sbjct: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVVQIVEVLDDRARDDRLVALLEKYHK 360

Query: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM+
Sbjct: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMI 414

[Close]

BLAST of Carg08868 vs. NCBI nr
Match: XP_022996105.1 (LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita maxima])

HSP 1 Score: 783.5 bits (2022), Expect = 9.2e-223
Identity = 401/417 (96.16%), Postives = 409/417 (98.08%), Query Frame = 0


Query: 2   VGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDSE 61
           VGKL+E STVSEPVAQE FVK DTKTEKKK+KKKRDRESGCQEKDEVSHEKNV+ GTDSE
Sbjct: 10  VGKLKEGSTVSEPVAQEVFVKPDTKTEKKKKKKKRDRESGCQEKDEVSHEKNVLEGTDSE 69

Query: 62  LHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAG 121
           LHKKKKKHKK KDEN+SITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAG
Sbjct: 70  LHKKKKKHKKSKDENISITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAG 129

Query: 122 LPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKG 181
           LPDEVLECCRTFK+PSPIQSHAWPFLLHG+DFIGIAA GSGKTLAFGVPGIMHVLNKRKG
Sbjct: 130 LPDEVLECCRTFKTPSPIQSHAWPFLLHGQDFIGIAAAGSGKTLAFGVPGIMHVLNKRKG 189

Query: 182 KMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDI 241
           KMPKGRSP CLVLSPTRELAQQISSVLQNA EPCGVTSTCLYGGVSKGSQISCLKSGVDI
Sbjct: 190 KMPKGRSPFCLVLSPTRELAQQISSVLQNAXEPCGVTSTCLYGGVSKGSQISCLKSGVDI 249

Query: 242 VIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSA 301
           VIGTPGRLKDLMEME+CRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSA
Sbjct: 250 VIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSA 309

Query: 302 TWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKS 361
           TWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKS
Sbjct: 310 TWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKS 369

Query: 362 QRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           QRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM+
Sbjct: 370 QRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMI 426

[Close]

BLAST of Carg08868 vs. ExPASy Swiss-Prot
Match: Q9C551 (DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=1 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.6e-137
Identity = 269/428 (62.85%), Postives = 324/428 (75.70%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           M G+ +E     EP+A    V+S    +KKK+ KK        E +EV  E  V  G + 
Sbjct: 1   MAGQKQELPVSGEPLA----VESPMTNKKKKKSKKNKHTEENHEVEEVPQE--VTNGVEE 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTD--------GSVVVTGKGVKEGKFA 120
           EL  K+KK K+ ++E  S   + +K+VP+    + D          VVVTGKGV+E K+A
Sbjct: 61  ELSNKEKKKKRKREEKES-EKNKKKDVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYA 120

Query: 121 PLKSFAEAGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGI 180
            LK+FAE+ LP+ VL+CC+TF+ PSPIQSH WPFLL GRD IGIA TGSGKTLAFG+P I
Sbjct: 121 ALKTFAESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAI 180

Query: 181 MHVL--NKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGS 240
           MHVL  NK+ G   K  +P CLVLSPTRELA QIS VL+ AGEPCG+ S C+YGG SKG 
Sbjct: 181 MHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGP 240

Query: 241 QISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQT 300
           QIS ++SGVDIVIGTPGRL+DL+E  + RLS+VSFVVLDEADRMLDMGFE  VR ILS T
Sbjct: 241 QISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNT 300

Query: 301 CTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDR 360
              RQMVMFSATWPL V++LAQEFMDP+P+KV++GS DLAANHDVMQI+EVLD+RARD R
Sbjct: 301 NKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQR 360

Query: 361 LVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFK 419
           L+ALLEKYHKSQ+NRVLVF LYK EA R+E+ LQ+RGWKAVSIHG+KAQ+ERT++LSLFK
Sbjct: 361 LIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFK 420

[Close]

BLAST of Carg08868 vs. ExPASy Swiss-Prot
Match: Q6YS30 (DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0301200 PE=2 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.3e-136
Identity = 265/405 (65.43%), Postives = 302/405 (74.57%), Query Frame = 0


Query: 14  PVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDSELHKKKKKHKKPK 73
           P  QE   +   K +K K+ KKR  E+   E + V  E      TD      KKK  K  
Sbjct: 7   PEQQEDVSRKSKKEKKSKKDKKRKLEA---EAEVVVVEAAAATSTDEATKSSKKKRAKG- 66

Query: 74  DENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRTF 133
                +   +E       EN     V VTGKG  + K+APL SFA   LP +VL+CC+ F
Sbjct: 67  ----DLGQGEEA------ENGGGKVVAVTGKGSADAKYAPLSSFAATALPPQVLDCCKGF 126

Query: 134 KSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLV 193
           + PSPIQ++AWP+LL GRDFIGIAATGSGKT+AFGVP +MHV  K   K  K   P  LV
Sbjct: 127 ERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLV 186

Query: 194 LSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDLM 253
           LSPTRELAQQI+ VL  AG PCG++S CLYGG SKG QIS LKSGVDIVIGTPGR+KDL+
Sbjct: 187 LSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLI 246

Query: 254 EMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQE 313
           EM ICRL++VSFVVLDEADRMLDMGFEPEVR+ILSQT + RQ VMFSATWP  V+QLAQE
Sbjct: 247 EMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQE 306

Query: 314 FMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKSQRNRVLVFVLYK 373
           FMDP+P+KVV+GSEDLAANHDVMQIVEVLDDR+RD RLVALL+KYHK+QRNRVLVFVLYK
Sbjct: 307 FMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYK 366

Query: 374 NEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
            EA RVE MLQRRGW AVS+HGDKAQ +RTKALSLFK GS PLM+
Sbjct: 367 REATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMI 397

[Close]

BLAST of Carg08868 vs. ExPASy Swiss-Prot
Match: A7TTT5 (ATP-dependent RNA helicase DBP2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP2 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 7.4e-74
Identity = 148/332 (44.58%), Postives = 214/332 (64.46%), Query Frame = 0


Query: 89  KVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRT--FKSPSPIQSHAWPF 148
           ++NE   +  + +TG  + +    P+ SF EAG PD VLE  +   F+ P+ IQ   WP 
Sbjct: 91  EINEFRREHEMTITGHDIPK----PITSFDEAGFPDYVLEEVKAEGFEKPTGIQCQGWPM 150

Query: 149 LLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISS 208
            L GRD IG+AATGSGKTL++ +PGI+H+    +  +  G  P+ LVL+PTRELA QI  
Sbjct: 151 ALSGRDMIGVAATGSGKTLSYCLPGIVHI--NAQPLLSPGDGPIVLVLAPTRELAVQIQK 210

Query: 209 VLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFV 268
                G    + ++C+YGGV +G QI  L  G +IVI TPGRL D++E+    L  V+++
Sbjct: 211 ECSKFGSSSRIRNSCVYGGVPRGQQIRELSRGAEIVIATPGRLIDMLEIGKTNLKRVTYL 270

Query: 269 VLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGS 328
           VLDEADRMLDMGFEP++R I+ Q   +RQ +M+SATWP +V QLA ++++ DP++V +GS
Sbjct: 271 VLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAHDYLN-DPIQVQIGS 330

Query: 329 EDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRR 388
            +L+A+H++ Q+VEV+ D  + DRL+  LE   + + +++LVF   K     V K L+  
Sbjct: 331 LELSASHNITQLVEVVSDFEKRDRLLKHLETASEDKDSKILVFASTKRTCDEVTKYLRED 390

Query: 389 GWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           GW A++IHGDK Q ER   L  F+ G  P+MV
Sbjct: 391 GWPALAIHGDKDQRERDWVLQEFREGRSPIMV 415

[Close]

BLAST of Carg08868 vs. ExPASy Swiss-Prot
Match: P24782 (ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp2 PE=2 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 2.8e-73
Identity = 150/332 (45.18%), Postives = 220/332 (66.27%), Query Frame = 0


Query: 89  KVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRT--FKSPSPIQSHAWPF 148
           +V E   +  +VV G  V +    P+ +F EAG P+ VL+  +   F++P+PIQ  AWP 
Sbjct: 100 EVTEYRKEKEIVVHGLNVPK----PVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPM 159

Query: 149 LLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISS 208
            + GRD +GI+ATGSGKTL++ +P I+H+    +  +  G  P+ LVL+PTRELA QI  
Sbjct: 160 AMSGRDMVGISATGSGKTLSYCLPAIVHI--NAQPLLSPGDGPIVLVLAPTRELAVQIQQ 219

Query: 209 VLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFV 268
                G+   + +TC+YGGV +G QI  L  GV+I I TPGRL D+++     L  V+++
Sbjct: 220 ECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYL 279

Query: 269 VLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGS 328
           VLDEADRMLDMGFEP++R I+ Q   +RQ VMFSATWP +V +LA+++++ D ++V VGS
Sbjct: 280 VLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLN-DYIQVTVGS 339

Query: 329 EDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRR 388
            DLAA+H++ QIVEV+D+  +  RL   +E+  K + N+VL+F   K  A  + + L++ 
Sbjct: 340 LDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQD 399

Query: 389 GWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           GW A++IHGDKAQ ER   L+ F++G  P+MV
Sbjct: 400 GWPALAIHGDKAQDERDWVLNEFRTGKSPIMV 424

[Close]

BLAST of Carg08868 vs. ExPASy Swiss-Prot
Match: G0SFM2 (ATP-dependent RNA helicase DBP2 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=DBP2 PE=3 SV=2)

HSP 1 Score: 276.6 bits (706), Expect = 4.8e-73
Identity = 155/348 (44.54%), Postives = 222/348 (63.79%), Query Frame = 0


Query: 75  ENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRT-- 134
           E+ ++T     EV K      D ++ V+G+ V +    P+++F EAG P  V++  +   
Sbjct: 96  EHPNVTARSMAEVEKFRR---DHNITVSGRDVPK----PVETFDEAGFPRYVMDEVKAQG 155

Query: 135 FKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCL 194
           F +P+ IQ+  WP  L GRD +GIA TGSGKTL + +P I+H+    +  +  G  P+ L
Sbjct: 156 FPAPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHI--NAQPLLAPGDGPIVL 215

Query: 195 VLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDL 254
           VL+PTRELA QI   +   G+   + +TC+YGGV KG QI  L+ GV++ I TPGRL D+
Sbjct: 216 VLAPTRELAVQIQQEINKFGKSSRIRNTCIYGGVPKGPQIRDLQRGVEVCIATPGRLIDM 275

Query: 255 MEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQ 314
           +E     L  V+++VLDEADRMLDMGFEP++R I+SQ   +RQ +M+SATWP +V  LA 
Sbjct: 276 LESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSATWPKEVRNLAA 335

Query: 315 EFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKSQ--RNRVLVFV 374
           +F+  D ++V +GS DLAANH + QIVEV+ +  + DRL+  LEK   S+  +N+ L+FV
Sbjct: 336 DFL-TDFIQVNIGSLDLAANHRITQIVEVISESEKRDRLIKHLEKIMDSRDTQNKCLIFV 395

Query: 375 LYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
             K  A  + + L++ GW A+SIHGDK Q ER   L  FK+G  P+MV
Sbjct: 396 GTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMV 433

[Close]

BLAST of Carg08868 vs. ExPASy TrEMBL
Match: A0A6J1ET43 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437470 PE=3 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.6e-225
Identity = 409/418 (97.85%), Postives = 412/418 (98.56%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           MVGKLEEDSTVSEPVAQE FVKSDTKTE    KKKRDRESGCQEKDEVSHEKNV+VGTDS
Sbjct: 1   MVGKLEEDSTVSEPVAQEVFVKSDTKTE----KKKRDRESGCQEKDEVSHEKNVLVGTDS 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120
           ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKE KFAPLKSFAEA
Sbjct: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKERKFAPLKSFAEA 120

Query: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180
           GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK
Sbjct: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180

Query: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240
           GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD
Sbjct: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240

Query: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300
           IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS
Sbjct: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300

Query: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360
           ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDV+QIVEVLDDRARDDRLVALLEKYHK
Sbjct: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVVQIVEVLDDRARDDRLVALLEKYHK 360

Query: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM+
Sbjct: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMI 414

[Close]

BLAST of Carg08868 vs. ExPASy TrEMBL
Match: A0A6J1K5T0 (LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111491423 PE=3 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 4.5e-223
Identity = 401/417 (96.16%), Postives = 409/417 (98.08%), Query Frame = 0


Query: 2   VGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDSE 61
           VGKL+E STVSEPVAQE FVK DTKTEKKK+KKKRDRESGCQEKDEVSHEKNV+ GTDSE
Sbjct: 10  VGKLKEGSTVSEPVAQEVFVKPDTKTEKKKKKKKRDRESGCQEKDEVSHEKNVLEGTDSE 69

Query: 62  LHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAG 121
           LHKKKKKHKK KDEN+SITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAG
Sbjct: 70  LHKKKKKHKKSKDENISITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAG 129

Query: 122 LPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKG 181
           LPDEVLECCRTFK+PSPIQSHAWPFLLHG+DFIGIAA GSGKTLAFGVPGIMHVLNKRKG
Sbjct: 130 LPDEVLECCRTFKTPSPIQSHAWPFLLHGQDFIGIAAAGSGKTLAFGVPGIMHVLNKRKG 189

Query: 182 KMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDI 241
           KMPKGRSP CLVLSPTRELAQQISSVLQNA EPCGVTSTCLYGGVSKGSQISCLKSGVDI
Sbjct: 190 KMPKGRSPFCLVLSPTRELAQQISSVLQNAXEPCGVTSTCLYGGVSKGSQISCLKSGVDI 249

Query: 242 VIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSA 301
           VIGTPGRLKDLMEME+CRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSA
Sbjct: 250 VIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSA 309

Query: 302 TWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKS 361
           TWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKS
Sbjct: 310 TWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKS 369

Query: 362 QRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           QRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM+
Sbjct: 370 QRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMI 426

[Close]

BLAST of Carg08868 vs. ExPASy TrEMBL
Match: A0A6J1HLR1 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464108 PE=3 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 6.9e-208
Identity = 380/419 (90.69%), Postives = 396/419 (94.51%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKK-RDRESGCQEKDEVSHEKNVVVGTD 60
           MVGKL ED+TVSEPVAQEAF K DTK EKKK+KKK RD++SGCQE++EVS ++ +  GTD
Sbjct: 1   MVGKLREDATVSEPVAQEAFEKCDTKAEKKKKKKKNRDKDSGCQEENEVSPKRKLQEGTD 60

Query: 61  SELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAE 120
           SE+HKKKKKHKK KDENVSI TSDEKE  KV+ENSTDGSVVVTGKGVKE  F PLKSF E
Sbjct: 61  SEIHKKKKKHKKSKDENVSINTSDEKEEAKVDENSTDGSVVVTGKGVKEAGFVPLKSFVE 120

Query: 121 AGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180
           AGLPD VLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR
Sbjct: 121 AGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKR 180

Query: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGV 240
           KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQIS LKSGV
Sbjct: 181 KGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISSLKSGV 240

Query: 241 DIVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMF 300
           DIVIGTPGRLKDLMEME+CRLSEVSFVVLDEADRMLDMGFEPEVR ILSQTC ERQMVMF
Sbjct: 241 DIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVMF 300

Query: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYH 360
           SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR+RD+RLVALLEKYH
Sbjct: 301 SATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKYH 360

Query: 361 KSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           KSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS PLM+
Sbjct: 361 KSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 419

[Close]

BLAST of Carg08868 vs. ExPASy TrEMBL
Match: A0A6J1HUH8 (DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111466827 PE=3 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 2.9e-206
Identity = 379/420 (90.24%), Postives = 394/420 (93.81%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTE--KKKRKKKRDRESGCQEKDEVSHEKNVVVGT 60
           MVGKL ED+TVSEPVAQ AF K DT+ E  KKKRKK RD++SGCQE++EVS ++ V  GT
Sbjct: 1   MVGKLREDATVSEPVAQ-AFEKCDTRAEKKKKKRKKNRDKDSGCQEENEVSPKRKVQEGT 60

Query: 61  DSELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFA 120
           DSE HKKKKKHKK KDENVSI  SDEK+ PKV+ENSTDGSVVVTGKGVKE  F PLKSF 
Sbjct: 61  DSEHHKKKKKHKKSKDENVSINASDEKQEPKVDENSTDGSVVVTGKGVKEAGFVPLKSFV 120

Query: 121 EAGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 180
           EAGLPD VLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK
Sbjct: 121 EAGLPDAVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNK 180

Query: 181 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSG 240
           RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSG
Sbjct: 181 RKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSG 240

Query: 241 VDIVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVM 300
           VDIVIGTPGRLKDLMEME+CRLSEVSFVVLDEADRMLDMGFEPEVR ILSQTC ERQMVM
Sbjct: 241 VDIVIGTPGRLKDLMEMEVCRLSEVSFVVLDEADRMLDMGFEPEVRFILSQTCKERQMVM 300

Query: 301 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKY 360
           FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR+RD+RLVALLEKY
Sbjct: 301 FSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRSRDNRLVALLEKY 360

Query: 361 HKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           HKSQRNRVLVFVLYKNEA+RVE MLQRRGWKAVSIHGDKAQTERTKALSLFKSGS PLM+
Sbjct: 361 HKSQRNRVLVFVLYKNEASRVENMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPLMI 419

[Close]

BLAST of Carg08868 vs. ExPASy TrEMBL
Match: A0A5A7VL81 (DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00600 PE=3 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 1.4e-203
Identity = 370/418 (88.52%), Postives = 391/418 (93.54%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           MVGKL+EDST+SE +AQ+ F K D+K EKKK+KKKRD +S C E++EVS +  +  GTDS
Sbjct: 1   MVGKLKEDSTISEQLAQKPFEKPDSKAEKKKKKKKRDGDSVCLEENEVSPKTKLQEGTDS 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEA 120
           ELHKKKKKHKK KD ++ I TSDEK+  KV+ENSTDGSVVVTGK VKE KF PLKSF EA
Sbjct: 61  ELHKKKKKHKKSKDVSLDIKTSDEKDEAKVDENSTDGSVVVTGKDVKEAKFVPLKSFVEA 120

Query: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRK 180
           GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVL KRK
Sbjct: 121 GLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLKKRK 180

Query: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVD 240
           GKMPKGRSPLCLVLSPTRELAQQISSVL+NAG+PCGV STCLYGGVSKGSQISCLKSGVD
Sbjct: 181 GKMPKGRSPLCLVLSPTRELAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGVD 240

Query: 241 IVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300
           IVIGTPGRLKDLMEME+CRL+EVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS
Sbjct: 241 IVIGTPGRLKDLMEMEVCRLAEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFS 300

Query: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHK 360
           ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDR RDDRL ALLEKYHK
Sbjct: 301 ATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRLRDDRLGALLEKYHK 360

Query: 361 SQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMV 419
           SQRNRVLVFVLYKNEAARVE+MLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM+
Sbjct: 361 SQRNRVLVFVLYKNEAARVERMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLMI 418

[Close]

BLAST of Carg08868 vs. TAIR 10
Match: AT1G31970.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 490.7 bits (1262), Expect = 1.2e-138
Identity = 269/428 (62.85%), Postives = 324/428 (75.70%), Query Frame = 0


Query: 1   MVGKLEEDSTVSEPVAQEAFVKSDTKTEKKKRKKKRDRESGCQEKDEVSHEKNVVVGTDS 60
           M G+ +E     EP+A    V+S    +KKK+ KK        E +EV  E  V  G + 
Sbjct: 1   MAGQKQELPVSGEPLA----VESPMTNKKKKKSKKNKHTEENHEVEEVPQE--VTNGVEE 60

Query: 61  ELHKKKKKHKKPKDENVSITTSDEKEVPKVNENSTD--------GSVVVTGKGVKEGKFA 120
           EL  K+KK K+ ++E  S   + +K+VP+    + D          VVVTGKGV+E K+A
Sbjct: 61  ELSNKEKKKKRKREEKES-EKNKKKDVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYA 120

Query: 121 PLKSFAEAGLPDEVLECCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGI 180
            LK+FAE+ LP+ VL+CC+TF+ PSPIQSH WPFLL GRD IGIA TGSGKTLAFG+P I
Sbjct: 121 ALKTFAESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAI 180

Query: 181 MHVL--NKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGS 240
           MHVL  NK+ G   K  +P CLVLSPTRELA QIS VL+ AGEPCG+ S C+YGG SKG 
Sbjct: 181 MHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGP 240

Query: 241 QISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQT 300
           QIS ++SGVDIVIGTPGRL+DL+E  + RLS+VSFVVLDEADRMLDMGFE  VR ILS T
Sbjct: 241 QISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNT 300

Query: 301 CTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDR 360
              RQMVMFSATWPL V++LAQEFMDP+P+KV++GS DLAANHDVMQI+EVLD+RARD R
Sbjct: 301 NKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQR 360

Query: 361 LVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFK 419
           L+ALLEKYHKSQ+NRVLVF LYK EA R+E+ LQ+RGWKAVSIHG+KAQ+ERT++LSLFK
Sbjct: 361 LIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFK 420

[Close]

BLAST of Carg08868 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 276.6 bits (706), Expect = 3.4e-74
Identity = 146/325 (44.92%), Postives = 212/325 (65.23%), Query Frame = 0


Query: 95  TDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRT--FKSPSPIQSHAWPFLLHGRD 154
           T+  + V G+ V +    P+K F +A  PD +LE      F  P+PIQ+  WP  L GRD
Sbjct: 149 TERDISVEGRDVPK----PMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRD 208

Query: 155 FIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAG 214
            IGIA TGSGKTLA+ +P ++HV    + ++ +   P+ L+L+PTRELA QI    +  G
Sbjct: 209 LIGIAETGSGKTLAYLLPALVHV--SAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFG 268

Query: 215 EPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFVVLDEAD 274
              GV STC+YGG  KG QI  L+ GV+IVI TPGRL D++E +   L  V+++VLDEAD
Sbjct: 269 LRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEAD 328

Query: 275 RMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAAN 334
           RMLDMGFEP++R I+SQ   +RQ +++SATWP +V  LA++F+  DP K ++GS DL AN
Sbjct: 329 RMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL-RDPYKAIIGSTDLKAN 388

Query: 335 HDVMQIVEVLDDRARDDRLVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVS 394
             + Q++E++    + +RL+ LL++      +++L+FV  K    +V + L+  GW A++
Sbjct: 389 QSINQVIEIVPTPEKYNRLLTLLKQL--MDGSKILIFVETKRGCDQVTRQLRMDGWPALA 448

Query: 395 IHGDKAQTERTKALSLFKSGSYPLM 418
           IHGDK Q+ER + L+ FKSG  P+M
Sbjct: 449 IHGDKTQSERDRVLAEFKSGRSPIM 464

[Close]

BLAST of Carg08868 vs. TAIR 10
Match: AT5G63120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 276.6 bits (706), Expect = 3.4e-74
Identity = 146/325 (44.92%), Postives = 212/325 (65.23%), Query Frame = 0


Query: 95  TDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRT--FKSPSPIQSHAWPFLLHGRD 154
           T+  + V G+ V +    P+K F +A  PD +LE      F  P+PIQ+  WP  L GRD
Sbjct: 149 TERDISVEGRDVPK----PMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRD 208

Query: 155 FIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAG 214
            IGIA TGSGKTLA+ +P ++HV    + ++ +   P+ L+L+PTRELA QI    +  G
Sbjct: 209 LIGIAETGSGKTLAYLLPALVHV--SAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFG 268

Query: 215 EPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFVVLDEAD 274
              GV STC+YGG  KG QI  L+ GV+IVI TPGRL D++E +   L  V+++VLDEAD
Sbjct: 269 LRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEAD 328

Query: 275 RMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGSEDLAAN 334
           RMLDMGFEP++R I+SQ   +RQ +++SATWP +V  LA++F+  DP K ++GS DL AN
Sbjct: 329 RMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL-RDPYKAIIGSTDLKAN 388

Query: 335 HDVMQIVEVLDDRARDDRLVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVS 394
             + Q++E++    + +RL+ LL++      +++L+FV  K    +V + L+  GW A++
Sbjct: 389 QSINQVIEIVPTPEKYNRLLTLLKQL--MDGSKILIFVETKRGCDQVTRQLRMDGWPALA 448

Query: 395 IHGDKAQTERTKALSLFKSGSYPLM 418
           IHGDK Q+ER + L+ FKSG  P+M
Sbjct: 449 IHGDKTQSERDRVLAEFKSGRSPIM 464

[Close]

BLAST of Carg08868 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 275.0 bits (702), Expect = 9.9e-74
Identity = 153/342 (44.74%), Postives = 218/342 (63.74%), Query Frame = 0


Query: 78  SITTSDEKEVPKVNENSTDGSVVVTGKGVKEGKFAPLKSFAEAGLPDEVLECCRT--FKS 137
           ++T ++ +E  K+ E      + V GK + +    P+KSF + G PD VLE  +   F  
Sbjct: 72  AMTDTEVEEYRKLRE------ITVEGKDIPK----PVKSFRDVGFPDYVLEEVKKAGFTE 131

Query: 138 PSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVPGIMHVLNKRKGKMPKGRSPLCLVLS 197
           P+PIQS  WP  + GRD IGIA TGSGKTL++ +P I+HV    +  +  G  P+ LVL+
Sbjct: 132 PTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHV--NAQPMLAHGDGPIVLVLA 191

Query: 198 PTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGSQISCLKSGVDIVIGTPGRLKDLMEM 257
           PTRELA QI       G    + +TC+YGGV KG Q+  L+ GV+IVI TPGRL D+ME 
Sbjct: 192 PTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES 251

Query: 258 EICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQTCTERQMVMFSATWPLQVNQLAQEFM 317
               L  V+++VLDEADRMLDMGF+P++R I+S    +RQ + +SATWP +V QL+++F+
Sbjct: 252 NNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFL 311

Query: 318 DPDPVKVVVGSEDLAANHDVMQIVEVLDDRARDDRLVALLEKYHKSQRNRVLVFVLYKNE 377
             +P KV++GS DL AN  + QIV+V+ +  + ++LV LLE       +R+LVF+  K  
Sbjct: 312 -YNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDI--MDGSRILVFLDTKKG 371

Query: 378 AARVEKMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPLM 418
             ++ + L+  GW A+SIHGDK+Q ER   LS F+SG  P+M
Sbjct: 372 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIM 398

[Close]

BLAST of Carg08868 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-62
Identity = 129/309 (41.75%), Postives = 194/309 (62.78%), Query Frame = 0


Query: 113 PLKSFAEAGLPDEVLE--CCRTFKSPSPIQSHAWPFLLHGRDFIGIAATGSGKTLAFGVP 172
           PL SF   GLP+E+L       F +PSPIQ+ +WP  +  RD + IA TGSGKTL + +P
Sbjct: 159 PLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 218

Query: 173 GIMHVLNKRKGKMPKGRSPLCLVLSPTRELAQQISSVLQNAGEPCGVTSTCLYGGVSKGS 232
           G MH+   ++        P  LVLSPTRELA QI       G+   ++  CLYGG  KG 
Sbjct: 219 GFMHL---QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGP 278

Query: 233 QISCLKSGVDIVIGTPGRLKDLMEMEICRLSEVSFVVLDEADRMLDMGFEPEVRSILSQT 292
           Q+  ++ GVDIV+ TPGRL D++EM+   L +VS++VLDEADRMLDMGFEP++R I+++ 
Sbjct: 279 QLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV 338

Query: 293 CTERQMVMFSATWPLQVNQLAQEFMDPDPVKVVVGS-EDLAANHDVMQIVEVLDDRARDD 352
            T+RQ +M++ATWP +V ++A + +  +P +V +G+ ++L AN  + Q +EVL    +  
Sbjct: 339 PTKRQTLMYTATWPKEVRKIAADLL-VNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS 398

Query: 353 RLVALLEKYHKSQRNRVLVFVLYKNEAARVEKMLQRRGWKAVSIHGDKAQTERTKALSLF 412
           RL  +L    +   +++++F   K    ++ + L R  + A +IHGDK+Q ER   L+ F
Sbjct: 399 RLEQILRS--QEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQF 458

Query: 413 KSGSYPLMV 419
           +SG  P++V
Sbjct: 459 RSGRTPVLV 460

The following BLAST results are available for this feature:

BLAST of Carg08868 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036221.1	6.8e-234	100.00	DEAD-box ATP-dependent RNA helicase 5, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6606281.1	6.0e-230	99.28	DEAD-box ATP-dependent RNA helicase 5, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023534620.1	5.2e-226	97.85	DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931231.1	3.4e-225	97.85	DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita moschata]	[more]
XP_022996105.1	9.2e-223	96.16	LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 5-like [Cucurbita maxim...	[more]

BLAST of Carg08868 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C551	1.6e-137	62.85	DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=...	[more]
Q6YS30	2.3e-136	65.43	DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A7TTT5	7.4e-74	44.58	ATP-dependent RNA helicase DBP2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 ...	[more]
P24782	2.8e-73	45.18	ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
G0SFM2	4.8e-73	44.54	ATP-dependent RNA helicase DBP2 OS=Chaetomium thermophilum (strain DSM 1495 / CB...	[more]

BLAST of Carg08868 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ET43	1.6e-225	97.85	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K5T0	4.5e-223	96.16	LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita max...	[more]
A0A6J1HLR1	6.9e-208	90.69	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HUH8	2.9e-206	90.24	DEAD-box ATP-dependent RNA helicase 5-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7VL81	1.4e-203	88.52	DEAD-box ATP-dependent RNA helicase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Carg08868 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31970.1	1.2e-138	62.85	DEA(D/H)-box RNA helicase family protein	[more]
AT5G63120.2	3.4e-74	44.92	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.1	3.4e-74	44.92	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G55150.1	9.9e-74	44.74	DEA(D/H)-box RNA helicase family protein	[more]
AT5G14610.2	1.8e-62	41.75	DEAD box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 132..338 e-value: 2.8E-60 score: 216.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 144..321 score: 30.565889
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 138..308 e-value: 2.2E-47 score: 161.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 324..420 e-value: 2.2E-17 score: 64.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 58..323 e-value: 3.3E-76 score: 257.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 259..418
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 110..324
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 349..418 e-value: 3.5E-7 score: 30.5
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 346..422 score: 8.656593
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	PANTHER	PTHR47958:SF82	BNAA08G07020D PROTEIN	coord: 3..418
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 3..418
None	No IPR available	CDD	cd00268	DEADc	coord: 133..322 e-value: 1.38373E-95 score: 283.179
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 267..275
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 115..141 score: 9.257704

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08868-RA	Carg08868-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding