Carg08829 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08829
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ferredoxin
Location	Carg_Chr02: 9023828 .. 9025965 (-)
RNA-Seq Expression	Carg08829
Synteny	Carg08829

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTCAAGCCGGAATCCTCCCGAAGTTTCCTTTCGACGAATCGAAACCGTCGCTTTTCCGACCTCTTGAAATGTCGCCGAAAAACGATCTCGACTGAGCTGCAGGCTACTGTTGACGTCGCCGGCAGGACCGACGACGGTTCTGCTTCGATTCCGACTCATAAGGTTACTGTTCATGATAGAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGTACAGCACCATTTTCAGTTTGCTCTCCTAGAAATGGCATCGACCATTTAATTTAATTTTCGCTTCTTGAGCAACTTCTTCAGCTTTGTAGAATCGATTAAATGTTTTTCACCTGTCTTTTTAGATTATTAGTTGTTAAGAGTTTGGGGATTCGAAGTTTTCTTTTCCCCCCATTTTTAGTGTGTACTGGTACATGGTATTTTATTGTATAATGGTTATGAATTTGAGGCGCGAGTAATAAATCCAAATACTGCAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATTTCCCTTCCTTTTGCTTGCAGGCACGGTATTGTTCTCTAATTCCCCAACTATCGATGAACTTCGCATATTCTTGCTCTAAGACATGTTTGAATATTATGTTAATGGCAAACACCATTGAATGTATGGGTGTTGGATCAACAATTTCGCTTGTCTCTGATGTTCTGTCCTCTGTCACTGGAAAACTGAGATCTGTCATAAAAATTTGTAGTTACTTAAGATCGTGGATTTATTTACCCCTAAAGTTGTTTCATTACGTAATCCTATGGTAAGCATTGATCATTTTGGATGAATTATGTGCTATGATTTGAAAAAAGATACACACCCATGTATAGAAAATCTATCTATAATTTTGGTACATTTCATTGATTTACCTACATTAGGTTTCTGTCAAAGAATGTAAGTGCAGGTTCATGGTCCTGTTGTGTAAAAAACCGAATAACCGAATAGTTTACAACCAAACAAAAACCATTTCAAAATGAAAAAGCTCTCTTGCCCTTCTTTCAACTGATTCTTCCCTGCAATGAAGCCATTTTCTGCATCCTTTTGATCTCCATTATCGGTACATATCATGTTCTGAAAGTATTTGTTTTATGACAGGTTGTTGTACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTTGGAATATCTGCCGAGTTGAAATCAAAGGCAATTCCTTTACTTGATTCTAGACTTGATTTTTCATGGGGTAAAATCTTAGATTATGCATCAGCATGTTCCAGTCAAGATTTAAGTGGAAGCTTTTCATTCTATTTATGAATTTGAGCCTGATTTGGTATGGTAGAAGCAGCTGCTGCTCATTGAGGATGGGAATAACATAGTTGAGTTTGTATTCTACTGGTTACTGGATAGAAAAAGGAAGAATAATCAAGAGCTGGTCCTTACAGGTCTCACTAGCAGAATATGTAGTTCTTGGCAAAATCATACAAAAAGATAAAAGAAAAAGAATACTGCAATTTGTATATCTAATTACCAAAATGCTTACCAGTGATTACAAAGGAAGAAGTTAGTGCAGTAGTAAAACCATTGACAACTTTCTGGATGATAACTGCATTGCTAATTGATATTCCTTATTATTCTCTACACTGCAGGGGTATGCACTTCTTTGCGTAGGTTTTCCAACCTCGGATGTTGAAGTAGAAACACAAGATGAGGATGAGGCATGTTTTCGAATATCTGCCACTCCTTAAGTTGAACCCAAATTCTGTTTGTTTGCCTAATTTTATATATTAGACATTTGGAGTTGCTATGATCATTCTTCATGCAAAAATTCACTACAATGCAGGTATATTGGCTTCAATTTGGAAGATATTTTGCCCGGGGGCCAATTGTAAGTTCTTTGCTTCCTTAAATCTATCAAAGTTTACTGGAGATGTGAAGTATTGGAAGAAAAATACAAAGGAAATATAAATCATGTTATTTTTTTTTTTTGCGGTTATGTTAAACAATTTATTCAATTTTCCAGGAAAGAGATGACTATGCTCTGGAGTTGGCTATGGCTGATGAGTAAACTATTGATCCCGGAGGATCTATGGACTGAGACATGA

mRNA sequence

ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTCAAGCCGGAATCCTCCCGAAGTTTCCTTTCGACGAATCGAAACCGTCGCTTTTCCGACCTCTTGAAATGTCGCCGAAAAACGATCTCGACTGAGCTGCAGGCTACTGTTGACGTCGCCGGCAGGACCGACGACGGTTCTGCTTCGATTCCGACTCATAAGGTTACTGTTCATGATAGAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATTTCCCTTCCTTTTGCTTGCAGGCACGGTTGTTGTACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTTGGAATATCTGCCGAGTTGAAATCAAAGGCAATTCCTTTACTTGATTCTAGACTTGATTTTTCATGGGGGGTATGCACTTCTTTGCGTAGGTATATTGGCTTCAATTTGGAAGATATTTTGCCCGGGGGCCAATTGAAAGAGATGACTATGCTCTGGAGTTGGCTATGGCTGATGAGTAAACTATTGATCCCGGAGGATCTATGGACTGAGACATGA

Coding sequence (CDS)

ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTCAAGCCGGAATCCTCCCGAAGTTTCCTTTCGACGAATCGAAACCGTCGCTTTTCCGACCTCTTGAAATGTCGCCGAAAAACGATCTCGACTGAGCTGCAGGCTACTGTTGACGTCGCCGGCAGGACCGACGACGGTTCTGCTTCGATTCCGACTCATAAGGTTACTGTTCATGATAGAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATTTCCCTTCCTTTTGCTTGCAGGCACGGTTGTTGTACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTTGGAATATCTGCCGAGTTGAAATCAAAGGCAATTCCTTTACTTGATTCTAGACTTGATTTTTCATGGGGGGTATGCACTTCTTTGCGTAGGTATATTGGCTTCAATTTGGAAGATATTTTGCCCGGGGGCCAATTGAAAGAGATGACTATGCTCTGGAGTTGGCTATGGCTGATGAGTAAACTATTGATCCCGGAGGATCTATGGACTGAGACATGA

Protein sequence

MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLWSWLWLMSKLLIPEDLWTET

Homology

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BLAST of Carg08829 vs. NCBI nr
Match: KAG7036183.1 (hypothetical protein SDJN02_02984, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404.4 bits (1038), Expect = 5.5e-109
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG
Sbjct: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLW 180
           QIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLW
Sbjct: 121 QIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLW 180

Query: 181 SWLWLMSKLLIPEDLWTET 200
           SWLWLMSKLLIPEDLWTET
Sbjct: 181 SWLWLMSKLLIPEDLWTET 199

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BLAST of Carg08829 vs. NCBI nr
Match: XP_022930965.1 (uncharacterized protein LOC111437299 [Cucurbita moschata] >XP_022930966.1 uncharacterized protein LOC111437299 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 5.0e-70
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG
Sbjct: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           QIRQPEALGISAELKSK   LL
Sbjct: 121 QIRQPEALGISAELKSKGYALL 142

[Close]

BLAST of Carg08829 vs. NCBI nr
Match: KAG6606242.1 (AP-2 complex subunit mu, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.0 bits (702), Expect = 5.0e-70
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG
Sbjct: 684 MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 743

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 744 SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 803

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           QIRQPEALGISAELKSK   LL
Sbjct: 804 QIRQPEALGISAELKSKGYALL 825

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BLAST of Carg08829 vs. NCBI nr
Match: XP_022996089.1 (uncharacterized protein LOC111491407 [Cucurbita maxima] >XP_022996090.1 uncharacterized protein LOC111491407 [Cucurbita maxima])

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-66
Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLP TSFRSVNLKPESSRSFLSTNRNRRFSDLLKCR K ISTELQA VDVAGRTD+G
Sbjct: 1   MDVLLPYTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRPKMISTELQAAVDVAGRTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           QIRQPEALGISAELKSK   LL
Sbjct: 121 QIRQPEALGISAELKSKGYALL 142

[Close]

BLAST of Carg08829 vs. NCBI nr
Match: XP_038888790.1 (ferredoxin C 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.9e-65
Identity = 130/142 (91.55%), Postives = 132/142 (92.96%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTSF SVNLKPES R FLSTNRNRRFSD+LKCRRKT STELQA VDVA RTDDG
Sbjct: 1   MDVLLPCTSFHSVNLKPESFRKFLSTNRNRRFSDILKCRRKTTSTELQAAVDVAARTDDG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           +IRQPEALGISAELKSK   LL
Sbjct: 121 EIRQPEALGISAELKSKGYALL 142

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BLAST of Carg08829 vs. ExPASy Swiss-Prot
Match: Q9C7Y4 (Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.6e-37
Identity = 81/142 (57.04%), Postives = 103/142 (72.54%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+  +D G
Sbjct: 1   MALILPCTFCTSLQKK--------NFPINRRYITNFRRGATTATCEFRIPVEVSTPSDRG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+ISLPFACRHGCCTSCAVR+KSG
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           ++RQP+ALGISAELKS+   LL
Sbjct: 121 ELRQPQALGISAELKSQGYALL 134

[Close]

BLAST of Carg08829 vs. ExPASy Swiss-Prot
Match: P0A3C7 (Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=petF PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-09
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQP 125
           T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q 
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 E 127
           +
Sbjct: 63  D 63

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BLAST of Carg08829 vs. ExPASy Swiss-Prot
Match: P0A3C8 (Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) OX=1168 GN=petF PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-09
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQP 125
           T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q 
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 E 127
           +
Sbjct: 63  D 63

[Close]

BLAST of Carg08829 vs. ExPASy Swiss-Prot
Match: P15788 (Ferredoxin OS=Halothece sp. (strain PCC 7418) OX=65093 GN=PCC7418_2938 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-09
Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQP 125
           ++KVT+ + E G+     VP+D+YIL  AE + I LP++CR G C++CA +IK G+I Q 
Sbjct: 3   SYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQS 62

Query: 126 E 127
           +
Sbjct: 63  D 63

[Close]

BLAST of Carg08829 vs. ExPASy Swiss-Prot
Match: P00253 (Ferredoxin OS=Desmonostoc muscorum OX=1179 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 8.8e-09
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQP 125
           T KVT+ +   G  HE  VP+D+YIL  AE +   LPF+CR G C++CA ++ SG + Q 
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 E 127
           +
Sbjct: 63  D 63

[Close]

BLAST of Carg08829 vs. ExPASy TrEMBL
Match: A0A6J1ESD7 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111437299 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG
Sbjct: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           QIRQPEALGISAELKSK   LL
Sbjct: 121 QIRQPEALGISAELKSKGYALL 142

[Close]

BLAST of Carg08829 vs. ExPASy TrEMBL
Match: A0A6J1K5R4 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111491407 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.1e-66
Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLP TSFRSVNLKPESSRSFLSTNRNRRFSDLLKCR K ISTELQA VDVAGRTD+G
Sbjct: 1   MDVLLPYTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRPKMISTELQAAVDVAGRTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           QIRQPEALGISAELKSK   LL
Sbjct: 121 QIRQPEALGISAELKSKGYALL 142

[Close]

BLAST of Carg08829 vs. ExPASy TrEMBL
Match: A0A6J1DQQ0 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111022934 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.4e-63
Identity = 127/142 (89.44%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTS RSVN K E SR FLS NRNRRFSDLLKCRRKT STELQA +DVAGRTD+G
Sbjct: 1   MDVLLPCTSPRSVNWKLECSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAIDVAGRTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           SASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SASIPTHKVTVHDRQRGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           +IRQPEALGISAELKSK   LL
Sbjct: 121 EIRQPEALGISAELKSKGYALL 142

[Close]

BLAST of Carg08829 vs. ExPASy TrEMBL
Match: A0A6J1I4R5 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111470650 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.4e-62
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTSFRSVNLKP S R F+STNRN RFSD+LKCRRKT S ELQA VDVA +TD+G
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTDNG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           QIRQPEALGISAELK+K   LL
Sbjct: 121 QIRQPEALGISAELKAKGYALL 142

[Close]

BLAST of Carg08829 vs. ExPASy TrEMBL
Match: A0A6J1GKE0 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111455118 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           MDVLLPCTSFRSVNLKP S R F+STNRN RFSD+LKCRRKT S ELQA VDVA +T++G
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTENG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           QIRQPEALGISAELKSK   LL
Sbjct: 121 QIRQPEALGISAELKSKGYALL 142

[Close]

BLAST of Carg08829 vs. TAIR 10
Match: AT1G32550.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-38
Identity = 81/142 (57.04%), Postives = 103/142 (72.54%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+  +D G
Sbjct: 1   MALILPCTFCTSLQKK--------NFPINRRYITNFRRGATTATCEFRIPVEVSTPSDRG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+ISLPFACRHGCCTSCAVR+KSG
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLL 143
           ++RQP+ALGISAELKS+   LL
Sbjct: 121 ELRQPQALGISAELKSQGYALL 134

[Close]

BLAST of Carg08829 vs. TAIR 10
Match: AT1G32550.2 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-36
Identity = 80/143 (55.94%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60
           M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+  +D G
Sbjct: 1   MALILPCTFCTSLQKK--------NFPINRRYITNFRRGATTATCEFRIPVEVSTPSDRG 60

Query: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120
           S  +P+HKVTVHDR+RGVVHEF   EDQYILH+AE+Q+ISLPFACRHGCCTSCAVR+KSG
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEF---EDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 QIRQPEALGISAELKSKAIPLLD 144
           ++RQP+ALGISAELKS+ I  LD
Sbjct: 121 ELRQPQALGISAELKSQRISSLD 132

[Close]

BLAST of Carg08829 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-07
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 77  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE 127
           G   EF V +DQYIL  AE   + LP++CR G C++CA +I SG + Q +
Sbjct: 70  GQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSD 119

[Close]

BLAST of Carg08829 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05
Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 86  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPL 142
           ED Y+L  AE   + LP++CR G C+SCA ++ SG I Q +   +  E  S+   L
Sbjct: 72  EDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVL 127

[Close]

BLAST of Carg08829 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.0e-05
Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 0


Query: 86  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE 127
           +D Y+L  AE   I LP++CR G C+SCA ++ SG + Q +
Sbjct: 72  DDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSD 112

The following BLAST results are available for this feature:

BLAST of Carg08829 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036183.1	5.5e-109	100.00	hypothetical protein SDJN02_02984, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022930965.1	5.0e-70	97.89	uncharacterized protein LOC111437299 [Cucurbita moschata] >XP_022930966.1 unchar...	[more]
KAG6606242.1	5.0e-70	97.89	AP-2 complex subunit mu, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022996089.1	4.4e-66	94.37	uncharacterized protein LOC111491407 [Cucurbita maxima] >XP_022996090.1 uncharac...	[more]
XP_038888790.1	2.9e-65	91.55	ferredoxin C 2, chloroplastic [Benincasa hispida]	[more]

BLAST of Carg08829 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7Y4	2.6e-37	57.04	Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1	[more]
P0A3C7	3.9e-09	45.90	Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 G...	[more]
P0A3C8	3.9e-09	45.90	Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) OX=1168 GN=petF PE=1 S...	[more]
P15788	6.7e-09	44.26	Ferredoxin OS=Halothece sp. (strain PCC 7418) OX=65093 GN=PCC7418_2938 PE=1 SV=2	[more]
P00253	8.8e-09	44.26	Ferredoxin OS=Desmonostoc muscorum OX=1179 PE=1 SV=2	[more]

BLAST of Carg08829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESD7	2.4e-70	97.89	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111437299 PE=3 SV=1	[more]
A0A6J1K5R4	2.1e-66	94.37	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111491407 PE=3 SV=1	[more]
A0A6J1DQQ0	6.4e-63	89.44	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111022934 PE=3 SV=1	[more]
A0A6J1I4R5	2.4e-62	88.03	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111470650 PE=3 SV=1	[more]
A0A6J1GKE0	3.2e-62	88.03	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111455118 PE=3 SV=1	[more]

BLAST of Carg08829 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32550.1	1.9e-38	57.04	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G32550.2	2.3e-36	55.94	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	4.9e-07	46.00	ferredoxin 3	[more]
AT1G10960.1	2.1e-05	39.29	ferredoxin 1	[more]
AT1G60950.1	6.0e-05	43.90	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 42..142 e-value: 4.0E-16 score: 60.7
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 77..126 e-value: 6.6E-11 score: 42.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 69..133 e-value: 8.30176E-13 score: 59.716
None	No IPR available	PANTHER	PTHR43112:SF10	FERREDOXIN C 2, CHLOROPLASTIC	coord: 22..142
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 22..142
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 58..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08829-RA	Carg08829-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding