Carg08787 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACAGGGCCGGTTAAGTCTCATCCTTTGCACAACTTCGCTCTGCCATTTCTGAAATGGGGTGGGAAGAATCAGACCAACAGTAATCACCGCATTCGGCGGGAAATTGGCGGCGACTCATCACCTGCCGTCGATCATTCTGAACCGGAGTCTGAAGCAGACTCCAAGCATCAACCTCGAGTTGGATCGCGCACCGCTCGGAATAGATTGCCGTTTTCACCATGCTCACTGGGAGATAAATCCGCGAAGCATTCTGAAGGTGAGGTCGGAGAAGAAGTTGTGAAGGAGCAGAAGCGGGAAGGTGAGGAGGTCGAGGGGGAGGAAATAGTGCAGAAGCCTTGGAATCTCAGGCCGCGGAAGGGCCCGTCCTTGAGAGGCTTTGGTGATTTGAAGAATGGACGAGACTTGCAAGAACAGGACGGGGCTGTTTCTTCCGCTGCTGGTGCGTTTCAGCAAGGGGAGAATCCGCAGCCGAAATCGCTCCGGTTGCGAGGATTTACAGAGTCGCATAGGATTGAGAAGAAGGAGAAGAGAAAGTTCTGGATCGCTTTGTCTAAAGATGAGATTGAGGAAGATATTTTTATCATGACTGGATCTAGACCTTCCAGACGGCCGAAGAAGAGACCTAAGAATGTTCAGAAGCAACTCGATGTATGAATTTTCCTGAAATTTCTTACTATTTCTTTTCTGCTTGTGATTGTACTGAAACGGTTTCGTTATTATTTTTTCTTGATGCTCAATGTATTGTTCGTCTCTCAGAGTGTGTTTCCTGGACTGTGGTTGGTCGGTGTTACAGCAGACGCCTATCGTATCGCCGATTCTCCGGCCAAGGTACTCTAAAAGACTTTTCTTCTTGCCCACAATTAAATGCAATTCCGATTTCCGCCATTTCATTGAATTCTGAACACGACGGTGCATTAATGTTTCTTCATTTCTTCGATTTCGTTTTTCAAACATGACAAACTATCGATTTTTCGTTTTCCCACACGCTTTGGTTTTTGTTGTTGCAGAGATAGGCATAATGACGATGGATATTTTTTGATCTTTGAAGTTGGAATATTTTGCCTGCCCTGCCTTGATTGGGAGCCTTGTTGGAGGTATACCGTTCTTACTTCTAGGAAGAAGAAATGAAATTACGATTCAAATTGAACACGTGGGAAATCCAGTTTTTCTGTGTTGTTGTTCCTACTTGTAATAATCTCTCTGGTCGATGAAAAGGGCAGGTTTTAGCGTTAGTTTTCGACTTGGTACTTTTATTATGAAAGTAGAGGTTAGTACGTTGAATTGAATCATATTATAAGGTTTTGTTATTAAAGCCTTCTGTGATATAGTTTGGAATTTTATTGCTCATGTGGACAATTCTTATTTAGTTGATCAATCATAATGTTTGACAGGCTTCCCTAGATTGCTGGGGACTAGATTTTCAAGAGCTTGGTTTCTTATGCAATTGCTACATCTTGTAGCAGGCAGTGCATTCTTTTTCAGATAGATCTTTCACTCGCATTCTTCAAGCTGATGCTGATGGTGATATTTTTCCATCCTTCCTTAATGTTTTGCGATTTTTGATCGTTCTTACTGCATTTGAATGGCTGAAAGCAGCTTCTTGCGAGTCATTTTTTGCACCAAATCTTTTTCTTGCTAGTAAAATGCTGATAGAACTTTCAAGTTCGGCACCATTTTTTTTTTTTTTATATGGGGACTTCGGGATATCTGAGCATTAATTTCATGGCCTTCACTTTTTTGTTTTCCTTTTATTACTCAAATCCTTTTGTGGGTTTGCCTTCAAATACTGATTAATTTAGTTGTTTTGGCCTTAATTTTGATTTGGAATTCCAAAAATCTCAAAGTGTTCATTCTTCTGTTTTGTTCTGCATGTTATGAGAGGCTAGGCAGCTTTCGTATAAAAATTTGTTCTTGAAGATTGCTCTCATCTTAGTTAACACTTTTGTTAACTGCTAATCTATACTTCTATTGCAGGATTTACTTGTGAAGTTGGTTCCAACTGA ATGGCTACAGGGCCGGTTAAGTCTCATCCTTTGCACAACTTCGCTCTGCCATTTCTGAAATGGGGTGGGAAGAATCAGACCAACAGTAATCACCGCATTCGGCGGGAAATTGGCGGCGACTCATCACCTGCCGTCGATCATTCTGAACCGGAGTCTGAAGCAGACTCCAAGCATCAACCTCGAGTTGGATCGCGCACCGCTCGGAATAGATTGCCGTTTTCACCATGCTCACTGGGAGATAAATCCGCGAAGCATTCTGAAGGTGAGGTCGGAGAAGAAGTTGTGAAGGAGCAGAAGCGGGAAGGTGAGGAGGTCGAGGGGGAGGAAATAGTGCAGAAGCCTTGGAATCTCAGGCCGCGGAAGGGCCCGTCCTTGAGAGGCTTTGGTGATTTGAAGAATGGACGAGACTTGCAAGAACAGGACGGGGCTGTTTCTTCCGCTGCTGGTGCGTTTCAGCAAGGGGAGAATCCGCAGCCGAAATCGCTCCGGTTGCGAGGATTTACAGAGTCGCATAGGATTGAGAAGAAGGAGAAGAGAAAGTTCTGGATCGCTTTGTCTAAAGATGAGATTGAGGAAGATATTTTTATCATGACTGGATCTAGACCTTCCAGACGGCCGAAGAAGAGACCTAAGAATGTTCAGAAGCAACTCGATAGTGTGTTTCCTGGACTGTGGTTGGTCGGTGTTACAGCAGACGCCTATCGTATCGCCGATTCTCCGGCCAAGGCAGTGCATTCTTTTTCAGATAGATCTTTCACTCGCATTCTTCAAGCTGATGCTGATGGTGATATTTTTCCATCCTTCCTTAATGTTTTGCGATTTTTGATCGTTCTTACTGCATTTGAATGGCTGAAAGCAGCTTCTTGCGAGTCATTTTTTGCACCAAATCTTTTTCTTGCTAGTAAAATGCTGATAGAACTTTCAAGATTTACTTGTGAAGTTGGTTCCAACTGA ATGGCTACAGGGCCGGTTAAGTCTCATCCTTTGCACAACTTCGCTCTGCCATTTCTGAAATGGGGTGGGAAGAATCAGACCAACAGTAATCACCGCATTCGGCGGGAAATTGGCGGCGACTCATCACCTGCCGTCGATCATTCTGAACCGGAGTCTGAAGCAGACTCCAAGCATCAACCTCGAGTTGGATCGCGCACCGCTCGGAATAGATTGCCGTTTTCACCATGCTCACTGGGAGATAAATCCGCGAAGCATTCTGAAGGTGAGGTCGGAGAAGAAGTTGTGAAGGAGCAGAAGCGGGAAGGTGAGGAGGTCGAGGGGGAGGAAATAGTGCAGAAGCCTTGGAATCTCAGGCCGCGGAAGGGCCCGTCCTTGAGAGGCTTTGGTGATTTGAAGAATGGACGAGACTTGCAAGAACAGGACGGGGCTGTTTCTTCCGCTGCTGGTGCGTTTCAGCAAGGGGAGAATCCGCAGCCGAAATCGCTCCGGTTGCGAGGATTTACAGAGTCGCATAGGATTGAGAAGAAGGAGAAGAGAAAGTTCTGGATCGCTTTGTCTAAAGATGAGATTGAGGAAGATATTTTTATCATGACTGGATCTAGACCTTCCAGACGGCCGAAGAAGAGACCTAAGAATGTTCAGAAGCAACTCGATAGTGTGTTTCCTGGACTGTGGTTGGTCGGTGTTACAGCAGACGCCTATCGTATCGCCGATTCTCCGGCCAAGGCAGTGCATTCTTTTTCAGATAGATCTTTCACTCGCATTCTTCAAGCTGATGCTGATGGTGATATTTTTCCATCCTTCCTTAATGTTTTGCGATTTTTGATCGTTCTTACTGCATTTGAATGGCTGAAAGCAGCTTCTTGCGAGTCATTTTTTGCACCAAATCTTTTTCTTGCTAGTAAAATGCTGATAGAACTTTCAAGATTTACTTGTGAAGTTGGTTCCAACTGA MATGPVKSHPLHNFALPFLKWGGKNQTNSNHRIRREIGGDSSPAVDHSEPESEADSKHQPRVGSRTARNRLPFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEEIVQKPWNLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHRIEKKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVGVTADAYRIADSPAKAVHSFSDRSFTRILQADADGDIFPSFLNVLRFLIVLTAFEWLKAASCESFFAPNLFLASKMLIELSRFTCEVGSN Homology
BLAST of Carg08787 vs. NCBI nr
Match: KAG7036141.1 (hypothetical protein SDJN02_02942, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 630.9 bits (1626), Expect = 5.8e-177 Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
BLAST of Carg08787 vs. NCBI nr
Match: XP_022958227.1 (uncharacterized protein LOC111459516 [Cucurbita moschata] >XP_023533389.1 uncharacterized protein LOC111795293 [Cucurbita pepo subsp. pepo] >KAG6606196.1 hypothetical protein SDJN03_03513, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 484.6 bits (1246), Expect = 6.7e-133 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg08787 vs. NCBI nr
Match: XP_022995688.1 (uncharacterized protein LOC111491147 [Cucurbita maxima]) HSP 1 Score: 472.2 bits (1214), Expect = 3.4e-129 Identity = 237/242 (97.93%), Postives = 238/242 (98.35%), Query Frame = 0
BLAST of Carg08787 vs. NCBI nr
Match: XP_038906758.1 (uncharacterized protein LOC120092679 [Benincasa hispida]) HSP 1 Score: 441.0 bits (1133), Expect = 8.4e-120 Identity = 224/245 (91.43%), Postives = 231/245 (94.29%), Query Frame = 0
BLAST of Carg08787 vs. NCBI nr
Match: XP_004152391.1 (uncharacterized protein LOC101222282 [Cucumis sativus] >KGN50280.1 hypothetical protein Csa_000031 [Cucumis sativus]) HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-119 Identity = 224/245 (91.43%), Postives = 231/245 (94.29%), Query Frame = 0
BLAST of Carg08787 vs. ExPASy TrEMBL
Match: A0A6J1H1A0 (uncharacterized protein LOC111459516 OS=Cucurbita moschata OX=3662 GN=LOC111459516 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.2e-133 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Carg08787 vs. ExPASy TrEMBL
Match: A0A6J1K8Q4 (uncharacterized protein LOC111491147 OS=Cucurbita maxima OX=3661 GN=LOC111491147 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.7e-129 Identity = 237/242 (97.93%), Postives = 238/242 (98.35%), Query Frame = 0
BLAST of Carg08787 vs. ExPASy TrEMBL
Match: A0A0A0KKR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165250 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 5.3e-120 Identity = 224/245 (91.43%), Postives = 231/245 (94.29%), Query Frame = 0
BLAST of Carg08787 vs. ExPASy TrEMBL
Match: A0A5A7TJQ0 (DUF1639 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00410 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 1.0e-118 Identity = 221/245 (90.20%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of Carg08787 vs. ExPASy TrEMBL
Match: A0A1S3ATL3 (uncharacterized protein LOC103482589 OS=Cucumis melo OX=3656 GN=LOC103482589 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 1.0e-118 Identity = 221/245 (90.20%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of Carg08787 vs. TAIR 10
Match: AT3G60410.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-24 Identity = 91/288 (31.60%), Postives = 138/288 (47.92%), Query Frame = 0
BLAST of Carg08787 vs. TAIR 10
Match: AT3G60410.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-24 Identity = 91/288 (31.60%), Postives = 138/288 (47.92%), Query Frame = 0
BLAST of Carg08787 vs. TAIR 10
Match: AT3G60410.3 (Protein of unknown function (DUF1639) ) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-24 Identity = 91/288 (31.60%), Postives = 138/288 (47.92%), Query Frame = 0
BLAST of Carg08787 vs. TAIR 10
Match: AT4G17440.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23 Identity = 83/197 (42.13%), Postives = 107/197 (54.31%), Query Frame = 0
BLAST of Carg08787 vs. TAIR 10
Match: AT4G17440.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23 Identity = 83/197 (42.13%), Postives = 107/197 (54.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|