Carg08783 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08783
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	axial regulator YABBY 5-like
Location	Carg_Chr02: 8745490 .. 8747559 (-)
RNA-Seq Expression	Carg08783
Synteny	Carg08783

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCAGTCTAGTCCTTTCTTTCTCTCTCTCTTTTGCTTTGTGCAAACTTTCTTTCAAAACTCATTATCAAAGAGAAAAGGCAGATCCAAGGAAGGTTGTTAATCTGTCAATCCCATCAATCAGTCAACCAAACACGACCAATCATCAATCAAATTTTTATAAAAGAAAAGTTGAAAATACATTCTAATTTGATATGTCATCCTCTTCTTCTTCTCCTACTTCTTCTACTACTACTACCACTCAGCAGCAGCAGCAGCAGCAGCAGCTGGACCACCACCTTCCCTCACCTGAGCAGCTCTGTTATGTCCATTGTAACATTTGTGACACTGTCCTTGCGGTACCATCTTATTCTCTCATTCTTCTCTTTTACCCTTCTCTTTTCCTCATAAACTTTTCTCCTTTCCTCTTATTTCATCTACATTTCTCTCTTTTTTGTGTTTTTTCCATCTGGGGTTCCGTTTATTTGGCTTCTTTTGATGATAAATCTGGGAATTTTGTAAATTTATGGCTCACCCTAGCTTGTTTGATCTAATTTCTTTGATGGGTTTTGTTGGGAATGTGTTGATTTTTAGGTCAGTGTTCCTTGTTCTAGCTTGTTCAAAACTGTGACTGTGCGATGTGGGCACTGCACCAATCTGCTGCCTGTGAACATGCGTGGCTTGCTTTTGCCTTCCGCTAATCAGTTTCATCAGCTCGGTCACTCTTTCTTTTCTCCTTCCCATAACATTCTGGTAATTTAAGCATAATTATACTCCCAAAGTTTCATGCTTTGAAGAAACTAACTAACTCATGTTTTCAATTGTATTCTTGTAGGAAAACATCCCAACGCCAAATTCCAATTATCTCATCAACCAGTTCGCAGCTACTAACACTTTTGGAATGCCAACTCGAGGAGTTGCTGATGAGCTCCCTAGGCCACCAGTCATCAACAGACGTGAGAGATTTACTTATCCTACTTTTCTTTTCTTTTTCCTGATGAAGATTATATCAAACAAAAGATGCAAGGAAACATGGATAAAGTTGCTAATCTTATCCAACTTAGAGAAAGTTAAGCTTTAATAAGCTCTAAATTCACATAAATTACATGTTTATGAAAGTGGGGTGTGTGAAAACATGAAGTTTTGTTCTTAGTATATGATTTGAATGCGCATAAAATTGTCCTGTTCAGCTCCGGAGAAGAGACAGAGAGTGCCCTCTGCATACAACCGCTTCATCAAGTGAGTAATGATTTGAAGTCCATTCATATCCATTCATCTCTCTCTCTCCATCTTTATTACAAAGAGAGATAAAAAAAAAAAAAAAAAAAAAAATTGCATGCAGAGATGAGATCCAACGCATCAAGTCAGTGAATCCGGATATATCCCACAGAGAAGCCTTCAGTGCTGCTGCTAAGAATGTAAATACCAACACCCACCAGAAATAAGAACAAAAAAATTGACACTTTTTTAGGGTTTGCTGAAAAATTGTGTTTTTTGTGTGTATATATTGGCAGTGGGCACACTTTCCACATATTCACTTTGGTCTCATGCCCGACCAGACAGTGAAGAAGACAAATATCCGGCAGCAGGTAATCTGTTAAAGGAATTTGCATTCTTCTGATTCTCCTTGTGTTTTGGAGAATGGGATGTGTGTGTGTGTGTGTTTGAACAGTGAAACCAAAGCAGTGTTTTAATGTTTGTAGGAGGGAGATCATGGGAGTGTTGTGATGAAAGACAATGGATTCTACGCCGCCGCCGCCGCCGCCTCACCCAACGTTGGTGTCTCCCATTTCTAAAACAAAACATGTCCCAAGGAATGACACTGCTTGCTTTTATCAACCTCTTTTCTTTATGTTTATATATTAAATACTCTCTCTTCCATGTATTTTCCCCTTACATTCAGACTACTGTTTTAATGTTATGGTTATGCCTATATTTCCCTCTCATCAATGCCTTCTTACTTTCCTTCTTTTAAGGTTTTGGCTTGCCTTGTTTGACTTATTCTTTGTTCATGCCTTCTCTTGGATGTCATGATTTGTTGTCATGTTTTCAAACTGTCGTTGAGTTTCAACTTGTCTTCCCACAAAACCT

mRNA sequence

ATATCAGTCTAGTCCTTTCTTTCTCTCTCTCTTTTGCTTTGTGCAAACTTTCTTTCAAAACTCATTATCAAAGAGAAAAGGCAGATCCAAGGAAGGTTGTTAATCTGTCAATCCCATCAATCAGTCAACCAAACACGACCAATCATCAATCAAATTTTTATAAAAGAAAAGTTGAAAATACATTCTAATTTGATATGTCATCCTCTTCTTCTTCTCCTACTTCTTCTACTACTACTACCACTCAGCAGCAGCAGCAGCAGCAGCAGCTGGACCACCACCTTCCCTCACCTGAGCAGCTCTGTTATGTCCATTGTAACATTTGTGACACTGTCCTTGCGGTCAGTGTTCCTTGTTCTAGCTTGTTCAAAACTGTGACTGTGCGATGTGGGCACTGCACCAATCTGCTGCCTGTGAACATGCGTGGCTTGCTTTTGCCTTCCGCTAATCAGTTTCATCAGCTCGGTCACTCTTTCTTTTCTCCTTCCCATAACATTCTGGAAAACATCCCAACGCCAAATTCCAATTATCTCATCAACCAGTTCGCAGCTACTAACACTTTTGGAATGCCAACTCGAGGAGTTGCTGATGAGCTCCCTAGGCCACCAGTCATCAACAGACCTCCGGAGAAGAGACAGAGAGTGCCCTCTGCATACAACCGCTTCATCAAAGATGAGATCCAACGCATCAAGTCAGTGAATCCGGATATATCCCACAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCACACTTTCCACATATTCACTTTGGTCTCATGCCCGACCAGACAGTGAAGAAGACAAATATCCGGCAGCAGGAGGGAGATCATGGGAGTGTTGTGATGAAAGACAATGGATTCTACGCCGCCGCCGCCGCCGCCTCACCCAACGTTGGTGTCTCCCATTTCTAAAACAAAACATGTCCCAAGGAATGACACTGCTTGCTTTTATCAACCTCTTTTCTTTATGTTTATATATTAAATACTCTCTCTTCCATGTATTTTCCCCTTACATTCAGACTACTGTTTTAATGTTATGGTTATGCCTATATTTCCCTCTCATCAATGCCTTCTTACTTTCCTTCTTTTAAGGTTTTGGCTTGCCTTGTTTGACTTATTCTTTGTTCATGCCTTCTCTTGGATGTCATGATTTGTTGTCATGTTTTCAAACTGTCGTTGAGTTTCAACTTGTCTTCCCACAAAACCT

Coding sequence (CDS)

ATGTCATCCTCTTCTTCTTCTCCTACTTCTTCTACTACTACTACCACTCAGCAGCAGCAGCAGCAGCAGCAGCTGGACCACCACCTTCCCTCACCTGAGCAGCTCTGTTATGTCCATTGTAACATTTGTGACACTGTCCTTGCGGTCAGTGTTCCTTGTTCTAGCTTGTTCAAAACTGTGACTGTGCGATGTGGGCACTGCACCAATCTGCTGCCTGTGAACATGCGTGGCTTGCTTTTGCCTTCCGCTAATCAGTTTCATCAGCTCGGTCACTCTTTCTTTTCTCCTTCCCATAACATTCTGGAAAACATCCCAACGCCAAATTCCAATTATCTCATCAACCAGTTCGCAGCTACTAACACTTTTGGAATGCCAACTCGAGGAGTTGCTGATGAGCTCCCTAGGCCACCAGTCATCAACAGACCTCCGGAGAAGAGACAGAGAGTGCCCTCTGCATACAACCGCTTCATCAAAGATGAGATCCAACGCATCAAGTCAGTGAATCCGGATATATCCCACAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCACACTTTCCACATATTCACTTTGGTCTCATGCCCGACCAGACAGTGAAGAAGACAAATATCCGGCAGCAGGAGGGAGATCATGGGAGTGTTGTGATGAAAGACAATGGATTCTACGCCGCCGCCGCCGCCGCCTCACCCAACGTTGGTGTCTCCCATTTCTAA

Protein sequence

MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF

Homology

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BLAST of Carg08783 vs. NCBI nr
Match: KAG7036137.1 (Axial regulator YABBY 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 480.7 bits (1236), Expect = 7.2e-132
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60
           MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV
Sbjct: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60

Query: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120
           TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN
Sbjct: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120

Query: 121 TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180
           TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA
Sbjct: 121 TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180

Query: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 239
           AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF
Sbjct: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 238

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BLAST of Carg08783 vs. NCBI nr
Match: XP_022957809.1 (axial regulator YABBY 5-like [Cucurbita moschata])

HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 236/238 (99.16%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60
           MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV
Sbjct: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60

Query: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120
           TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN
Sbjct: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120

Query: 121 TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180
           TFGMP+RGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA
Sbjct: 121 TFGMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180

Query: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 239
           AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY AAAAASPNVGVSHF
Sbjct: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY-AAAAASPNVGVSHF 237

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BLAST of Carg08783 vs. NCBI nr
Match: KAG6606190.1 (Axial regulator YABBY 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127
Identity = 235/238 (98.74%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60
           MSSSSSSPTSSTTTTT QQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV
Sbjct: 1   MSSSSSSPTSSTTTTT-QQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60

Query: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120
           TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN
Sbjct: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120

Query: 121 TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180
           TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA
Sbjct: 121 TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180

Query: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 239
           AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY  AAAASPNVGVSHF
Sbjct: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY--AAAASPNVGVSHF 235

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BLAST of Carg08783 vs. NCBI nr
Match: XP_022995783.1 (axial regulator YABBY 1-like [Cucurbita maxima])

HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123
Identity = 227/236 (96.19%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 3   SSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV 62
           SSSSSPTSSTTTTT     QQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV
Sbjct: 2   SSSSSPTSSTTTTT---TTQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV 61

Query: 63  RCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTF 122
           RCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTF
Sbjct: 62  RCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTF 121

Query: 123 GMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAK 182
           GMP+RGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAK
Sbjct: 122 GMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAK 181

Query: 183 NWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 239
           NWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY   AAASPNVGVSHF
Sbjct: 182 NWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY---AAASPNVGVSHF 231

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BLAST of Carg08783 vs. NCBI nr
Match: XP_038906988.1 (axial regulator YABBY 5-like [Benincasa hispida])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 218/244 (89.34%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 2   SSSSSSPTSSTTTTT------QQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSS 61
           SSSSSSPTS+TTTTT      QQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPC S
Sbjct: 5   SSSSSSPTSTTTTTTLSQQHLQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCCS 64

Query: 62  LFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQ 121
           LFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSPSHNILEN+ TPNSNYLINQ
Sbjct: 65  LFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNYLINQ 124

Query: 122 F-AATNTFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHR 181
           F A TN FGMP+RGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHR
Sbjct: 125 FGATTNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHR 184

Query: 182 EAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVG 239
           EAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGD  +V+MKDNGFYA+A     NVG
Sbjct: 185 EAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDTQNVLMKDNGFYASA-----NVG 243

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BLAST of Carg08783 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-62
Identity = 141/247 (57.09%), Postives = 166/247 (67.21%), Query Frame = 0


Query: 25  LDH-HLPSP-EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS 84
           LDH   PSP EQLCYVHCN CDT+LAV VPCSSLFKTVTVRCGHC NLL VN+RGLLLP+
Sbjct: 13  LDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPA 72

Query: 85  -----ANQFHQLGHSFFSPS--HNILENIPTPNSNYLINQFAATNTFGMPTRGVAD---- 144
                ANQ H  G S  SP+  H +L+ +     + L+ Q A+ +   +  R  +     
Sbjct: 73  PAPAPANQLH-FGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASN 132

Query: 145 ----------------ELPR--PPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISH 204
                           ELP+  P   NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDISH
Sbjct: 133 APAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH 192

Query: 205 REAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGF--YAAAAAASP 239
           REAFSAAAKNWAHFPHIHFGLMPDQ  KKT  + Q+G    +++KD+ +   AAAAAA+ 
Sbjct: 193 REAFSAAAKNWAHFPHIHFGLMPDQGFKKT-FKPQDGSE-DILLKDSLYAAAAAAAAAAA 252

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BLAST of Carg08783 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-62
Identity = 141/247 (57.09%), Postives = 166/247 (67.21%), Query Frame = 0


Query: 25  LDH-HLPSP-EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS 84
           LDH   PSP EQLCYVHCN CDT+LAV VPCSSLFKTVTVRCGHC NLL VN+RGLLLP+
Sbjct: 13  LDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPA 72

Query: 85  -----ANQFHQLGHSFFSPS--HNILENIPTPNSNYLINQFAATNTFGMPTRGVAD---- 144
                ANQ H  G S  SP+  H +L+ +     + L+ Q A+ +   +  R  +     
Sbjct: 73  PAPAPANQLH-FGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASN 132

Query: 145 ----------------ELPR--PPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISH 204
                           ELP+  P   NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDISH
Sbjct: 133 APAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH 192

Query: 205 REAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGF--YAAAAAASP 239
           REAFSAAAKNWAHFPHIHFGLMPDQ  KKT  + Q+G    +++KD+ +   AAAAAA+ 
Sbjct: 193 REAFSAAAKNWAHFPHIHFGLMPDQGFKKT-FKPQDGSE-DILLKDSLYAAAAAAAAAAA 252

[Close]

BLAST of Carg08783 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-62
Identity = 137/231 (59.31%), Postives = 156/231 (67.53%), Query Frame = 0


Query: 28  HLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSANQ 87
           H  S +QLCYVHC+ CDTVLAVSVP SSLFKTVTVRCGHC+NLL   V+MR LLLPS + 
Sbjct: 18  HFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS- 77

Query: 88  FHQLGHSFF-----SPSHNILENIPTPNSNYLINQFAATNTFG--------MPTRG---- 147
              LGHSF       P  N+LE + +   N  +N   + +           M TR     
Sbjct: 78  --NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSV 137

Query: 148 -VADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHF 207
               E+PRPP  NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHF
Sbjct: 138 DHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 197

Query: 208 PHIHFGLMPDQ-TVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSH 238
           PHIHFGLM D    KK N+RQQEG+ G  +M   GFY +AA    NVGV+H
Sbjct: 198 PHIHFGLMADHPPTKKANVRQQEGEDG--MMGREGFYGSAA----NVGVAH 239

[Close]

BLAST of Carg08783 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.9e-61
Identity = 143/243 (58.85%), Postives = 172/243 (70.78%), Query Frame = 0


Query: 3   SSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV 62
           SS SSP+S+  +           DH  PS + LCYV CN C T+LAV+VP +SLFKTVTV
Sbjct: 4   SSMSSPSSAVCSP----------DHFSPS-DHLCYVQCNFCQTILAVNVPYTSLFKTVTV 63

Query: 63  RCGHCTNLLPVNMRGLLLPSANQFH-QLG-HSFFSPSHNILENIPTPNSN---YLINQFA 122
           RCG CTNLL VNMR  +LP++NQ   QLG HS+F+P  +ILE +    SN    ++NQ  
Sbjct: 64  RCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSYFNP-QDILEELRDAPSNMNMMMMNQHP 123

Query: 123 ATNTF-GMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREA 182
             N            E+P+ P +NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREA
Sbjct: 124 TMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREA 183

Query: 183 FSAAAKNWAHFPHIHFGLMPD-QTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGV 239
           FSAAAKNWAHFPHIHFGL+PD Q VKKTN+ QQEG+  ++VMK+ GFYA AAA   NVGV
Sbjct: 184 FSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGE-DNMVMKE-GFYAPAAA---NVGV 229

[Close]

BLAST of Carg08783 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 5.9e-60
Identity = 139/261 (53.26%), Postives = 164/261 (62.84%), Query Frame = 0


Query: 5   SSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRC 64
           SS+P + +     Q QQQQ     L   EQLCYVHCN CDT+LAV VPCSSLFKTVTVRC
Sbjct: 3   SSAPETFSLDHLSQHQQQQ--PPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRC 62

Query: 65  GHCTNLLPVNMRGLLLP----SANQFHQLGHSFFSPS--HNILENIP------------- 124
           GHC NLL VN+RGLLLP    +ANQ    G +  SP+  H +L+ +P             
Sbjct: 63  GHCANLLSVNLRGLLLPAAASTANQL-PFGQALLSPTSPHGLLDEVPSFQAPASLMTEQA 122

Query: 125 -------TPNSNYLINQFAATNTFGMPTRGVADELPRP---PVINRPPEKRQRVPSAYNR 184
                  T +++   N   AT+      +    E  +P   P  NR  EKRQRVPSAYNR
Sbjct: 123 SPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNR 182

Query: 185 FIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSV 237
           FIKDEIQRIK+ NPDI+HREAFSAAAKNWAHFPHIHFGLMPDQ +KKT I+ Q+G    +
Sbjct: 183 FIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTGIQSQDGAGECM 242

[Close]

BLAST of Carg08783 vs. ExPASy TrEMBL
Match: A0A6J1H326 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111459241 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 5.6e-130
Identity = 236/238 (99.16%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60
           MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV
Sbjct: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60

Query: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120
           TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN
Sbjct: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATN 120

Query: 121 TFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180
           TFGMP+RGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA
Sbjct: 121 TFGMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAA 180

Query: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 239
           AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY AAAAASPNVGVSHF
Sbjct: 181 AKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY-AAAAASPNVGVSHF 237

[Close]

BLAST of Carg08783 vs. ExPASy TrEMBL
Match: A0A6J1K906 (axial regulator YABBY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491215 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123
Identity = 227/236 (96.19%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 3   SSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV 62
           SSSSSPTSSTTTTT     QQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV
Sbjct: 2   SSSSSPTSSTTTTT---TTQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV 61

Query: 63  RCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTF 122
           RCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTF
Sbjct: 62  RCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFAATNTF 121

Query: 123 GMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAK 182
           GMP+RGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAK
Sbjct: 122 GMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAK 181

Query: 183 NWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 239
           NWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY   AAASPNVGVSHF
Sbjct: 182 NWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFY---AAASPNVGVSHF 231

[Close]

BLAST of Carg08783 vs. ExPASy TrEMBL
Match: A0A0A0KKT0 (Axial regulator YABBY1 OS=Cucumis sativus OX=3659 GN=Csa_5G160210 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.2e-109
Identity = 212/249 (85.14%), Postives = 219/249 (87.95%), Query Frame = 0


Query: 2   SSSSSSPTS---------STTTTTQQQQQQQQLDHHLP-SPEQLCYVHCNICDTVLAVSV 61
           S SSSSPTS         +TTTTT   QQQQ LDHHLP SPEQLCYVHCNICDTVLAVSV
Sbjct: 5   SCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSV 64

Query: 62  PCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNY 121
           PC SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSPSHNILEN+ TPNSNY
Sbjct: 65  PCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNY 124

Query: 122 LINQF-AATNTFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 181
           LINQF A TN FGMP+RGV DELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD
Sbjct: 125 LINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 184

Query: 182 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE-GDHGSVVMKDNGFYAAAAAA 239
           ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE GD  +V+MKDNGFYA+A   
Sbjct: 185 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASA--- 244

[Close]

BLAST of Carg08783 vs. ExPASy TrEMBL
Match: A0A6J1DS48 (axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111023361 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.0e-107
Identity = 206/239 (86.19%), Postives = 212/239 (88.70%), Query Frame = 0


Query: 1   MSSSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTV 60
           MSSSSSSPT               LDHHLP+ EQLCYVHCNICDTVLAVSVPCSSLFKTV
Sbjct: 1   MSSSSSSPTPPPCHPL-PPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTV 60

Query: 61  TVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSP-SHNILENIPTPNSNYLINQFAAT 120
           TVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILENIPTPNSN+LINQFAAT
Sbjct: 61  TVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLINQFAAT 120

Query: 121 NTFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSA 180
           N FGMP+RGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSA
Sbjct: 121 NNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSA 180

Query: 181 AAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSHF 239
           AAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGD  +V+MKDNGFYA+A     NVGVSHF
Sbjct: 181 AAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDQ-NVLMKDNGFYASA-----NVGVSHF 232

[Close]

BLAST of Carg08783 vs. ExPASy TrEMBL
Match: A0A6J1I282 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111468943 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 209/242 (86.36%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 2   SSSSSSPTS---STTTTTQQQQQQQQLDHHLP-SPEQLCYVHCNICDTVLAVSVPCSSLF 61
           SSSSSSPTS   +TTTTT    QQQ LDHHLP + EQLCYVHCNICDTVLAVSVPCSSLF
Sbjct: 4   SSSSSSPTSTATATTTTTTTLSQQQLLDHHLPAAAEQLCYVHCNICDTVLAVSVPCSSLF 63

Query: 62  KTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLINQFA 121
           KTVTVRCGHCTNLLPVNMRGLLLPS NQFH LGH     SHNILENIPTPN NYLINQFA
Sbjct: 64  KTVTVRCGHCTNLLPVNMRGLLLPSPNQFHHLGH-----SHNILENIPTPNPNYLINQFA 123

Query: 122 ATNTFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAF 181
           ATN FG P+RGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAF
Sbjct: 124 ATNNFGTPSRGVIDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAF 183

Query: 182 SAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDHGSVVMKDN-GFYAAAAAASPNVGVS 239
           SAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEG+  SV+MKDN GFYA+AAA   NVGVS
Sbjct: 184 SAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGEQ-SVLMKDNGGFYASAAA---NVGVS 236

[Close]

BLAST of Carg08783 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 238.8 bits (608), Expect = 4.5e-63
Identity = 137/231 (59.31%), Postives = 156/231 (67.53%), Query Frame = 0


Query: 28  HLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSANQ 87
           H  S +QLCYVHC+ CDTVLAVSVP SSLFKTVTVRCGHC+NLL   V+MR LLLPS + 
Sbjct: 18  HFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS- 77

Query: 88  FHQLGHSFF-----SPSHNILENIPTPNSNYLINQFAATNTFG--------MPTRG---- 147
              LGHSF       P  N+LE + +   N  +N   + +           M TR     
Sbjct: 78  --NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSV 137

Query: 148 -VADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHF 207
               E+PRPP  NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHF
Sbjct: 138 DHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 197

Query: 208 PHIHFGLMPDQ-TVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSH 238
           PHIHFGLM D    KK N+RQQEG+ G  +M   GFY +AA    NVGV+H
Sbjct: 198 PHIHFGLMADHPPTKKANVRQQEGEDG--MMGREGFYGSAA----NVGVAH 239

[Close]

BLAST of Carg08783 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 235.3 bits (599), Expect = 4.9e-62
Identity = 143/243 (58.85%), Postives = 172/243 (70.78%), Query Frame = 0


Query: 3   SSSSSPTSSTTTTTQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTV 62
           SS SSP+S+  +           DH  PS + LCYV CN C T+LAV+VP +SLFKTVTV
Sbjct: 4   SSMSSPSSAVCSP----------DHFSPS-DHLCYVQCNFCQTILAVNVPYTSLFKTVTV 63

Query: 63  RCGHCTNLLPVNMRGLLLPSANQFH-QLG-HSFFSPSHNILENIPTPNSN---YLINQFA 122
           RCG CTNLL VNMR  +LP++NQ   QLG HS+F+P  +ILE +    SN    ++NQ  
Sbjct: 64  RCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSYFNP-QDILEELRDAPSNMNMMMMNQHP 123

Query: 123 ATNTF-GMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREA 182
             N            E+P+ P +NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREA
Sbjct: 124 TMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREA 183

Query: 183 FSAAAKNWAHFPHIHFGLMPD-QTVKKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGV 239
           FSAAAKNWAHFPHIHFGL+PD Q VKKTN+ QQEG+  ++VMK+ GFYA AAA   NVGV
Sbjct: 184 FSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGE-DNMVMKE-GFYAPAAA---NVGV 229

[Close]

BLAST of Carg08783 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 208.0 bits (528), Expect = 8.4e-54
Identity = 124/217 (57.14%), Postives = 142/217 (65.44%), Query Frame = 0


Query: 42  ICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSANQFHQLGHSFF----- 101
           +CD    VSVP SSLFKTVTVRCGHC+NLL   V+MR LLLPS +    LGHSF      
Sbjct: 1   MCDINWQVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS---NLGHSFLPPPPP 60

Query: 102 SPSHNILENIPTPNSNYLINQFAATNTFG--------MPTRG-----VADELPRPPVINR 161
            P  N+LE + +   N  +N   + +           M TR         E+PRPP  NR
Sbjct: 61  PPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANR 120

Query: 162 PPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQ-TV 221
           PPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHFPHIHFGLM D    
Sbjct: 121 PPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPT 180

Query: 222 KKTNIRQQEGDHGSVVMKDNGFYAAAAAASPNVGVSH 238
           KK N+RQQEG+ G  +M   GFY +AA    NVGV+H
Sbjct: 181 KKANVRQQEGEDG--MMGREGFYGSAA----NVGVAH 208

[Close]

BLAST of Carg08783 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 174.9 bits (442), Expect = 7.9e-44
Identity = 90/168 (53.57%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 33  EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHS 92
           EQLCY+ CN C+ +LAV+VPCSSLF  VTVRCGHCTNL  VNM                 
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAA--------------- 68

Query: 93  FFSPSHNILENIPTPN---SNYLINQFAATNT--FGMPTRGVADELPRPPVINRPPEKRQ 152
                   L+++  PN   +NY + ++ +++     +P+R     +    ++NRPPEKRQ
Sbjct: 69  -------ALQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQ 128

Query: 153 RVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLM 196
           RVPSAYN+FIK+EIQRIK+ NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 129 RVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154

[Close]

BLAST of Carg08783 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 174.9 bits (442), Expect = 7.9e-44
Identity = 90/168 (53.57%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 33  EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHS 92
           EQLCY+ CN C+ +LAV+VPCSSLF  VTVRCGHCTNL  VNM                 
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAA--------------- 68

Query: 93  FFSPSHNILENIPTPN---SNYLINQFAATNT--FGMPTRGVADELPRPPVINRPPEKRQ 152
                   L+++  PN   +NY + ++ +++     +P+R     +    ++NRPPEKRQ
Sbjct: 69  -------ALQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQ 128

Query: 153 RVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLM 196
           RVPSAYN+FIK+EIQRIK+ NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 129 RVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154

The following BLAST results are available for this feature:

BLAST of Carg08783 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036137.1	7.2e-132	100.00	Axial regulator YABBY 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957809.1	1.2e-129	99.16	axial regulator YABBY 5-like [Cucurbita moschata]	[more]
KAG6606190.1	1.1e-127	98.74	Axial regulator YABBY 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022995783.1	2.1e-123	96.19	axial regulator YABBY 1-like [Cucurbita maxima]	[more]
XP_038906988.1	1.2e-115	89.34	axial regulator YABBY 5-like [Benincasa hispida]	[more]

BLAST of Carg08783 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2X7Q3	1.6e-62	57.09	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	1.6e-62	57.09	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q9XFB1	6.3e-62	59.31	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
O22152	6.9e-61	58.85	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q01JG2	5.9e-60	53.26	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]

BLAST of Carg08783 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H326	5.6e-130	99.16	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111459241 PE=3 ...	[more]
A0A6J1K906	1.0e-123	96.19	axial regulator YABBY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491215 PE=3 SV...	[more]
A0A0A0KKT0	4.2e-109	85.14	Axial regulator YABBY1 OS=Cucumis sativus OX=3659 GN=Csa_5G160210 PE=3 SV=1	[more]
A0A6J1DS48	3.0e-107	86.19	axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111023361 PE=3...	[more]
A0A6J1I282	1.6e-105	86.36	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111468943 PE=3 SV...	[more]

BLAST of Carg08783 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00180.1	4.5e-63	59.31	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	4.9e-62	58.85	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.2	8.4e-54	57.14	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	7.9e-44	53.57	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	7.9e-44	53.57	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 139..202 e-value: 9.0E-6 score: 28.1
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 138..187
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 32..194 e-value: 6.3E-71 score: 238.3
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR31675:SF4	AXIAL REGULATOR YABBY 3	coord: 1..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08783-RA	Carg08783-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0010154	fruit development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:2000024	regulation of leaf development
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus