Carg08778 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08778
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Poly(ADP-ribose) polymerase, catalytic domain containing protein
Location	Carg_Chr02: 8724258 .. 8725127 (+)
RNA-Seq Expression	Carg08778
Synteny	Carg08778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTGGGTCAAATCCCTTCAGTGCAAATCCAGAGTCTTCGAAGACGTTTATCATCCAAGCCCTAAGAATCTAATCCCGAGTGCCAGCTGTCGGAAGGGCGTTCAGAGCCTCAAAGACGTCGTTGAAACCACCAAATCGAAGAACAAGAAGCCCAAACCCTCGCCGCCCGACAGAAAACCTGTTCCTCGAATCTCCAAATCAGAACCCGGATCGAGTCCCTGCACCCGCTCCAGAACCAGCGTTTCCTCTCGTTCATTGATAAGGCCCAACGATCTCCTCTTTCCGGCGCTTTCGGAGTTGCCGGAGGGCCATCATTCACGGAGCGTCGTCGAGATAATCTTCCACACCAGGTGGACCCCCAAGGCGTTTACGGGTCAGGTCGAGATGATTTTCAAGGTCCAGAACGGGTCCAAGACGGTGGCCCGATTTGAAGAGTATCGCGAAATGGTCAAGGCCAAGGCGGCAATGGGATGTCCCGCCGACGAGGAGAATGCCCGTTCTGTCGCCGACGGGAACGAGGTCATGAGGTTTCACTGCATGGGTCCGACATCCGACTGTGCAAAATACGACGGTAGCGGCGCCGCCGCCGGGTGGAGTTTCCCCGGGGTGAGAGGGTCGTCATCGTCGGCGATTTGCACTTTCGCCGGAAGTGGGGTAGCCCACGAGAACGCCGGCGGCGGAAGAGGGAGAAGAGCGATGTTGGTTTGTCGGGTCATCGCCGGTCGGGTCTCAAAGCAAGCGAAGAAACCCGACCCGTTTTTGGAAGCCCGAGTTGGCGTGGACTCGGTGAGTAGGGAAAACGGCGAGTTGCTCGTATTCGACTCGCGTGCAGTCCTCCCTTGTTTCCTCATCATCTACAAATTGTAA

mRNA sequence

ATGGCGTGGGTCAAATCCCTTCAGTGCAAATCCAGAGTCTTCGAAGACGTTTATCATCCAAGCCCTAAGAATCTAATCCCGAGTGCCAGCTGTCGGAAGGGCGTTCAGAGCCTCAAAGACGTCGTTGAAACCACCAAATCGAAGAACAAGAAGCCCAAACCCTCGCCGCCCGACAGAAAACCTGTTCCTCGAATCTCCAAATCAGAACCCGGATCGAGTCCCTGCACCCGCTCCAGAACCAGCGTTTCCTCTCGTTCATTGATAAGGCCCAACGATCTCCTCTTTCCGGCGCTTTCGGAGTTGCCGGAGGGCCATCATTCACGGAGCGTCGTCGAGATAATCTTCCACACCAGGTGGACCCCCAAGGCGTTTACGGGTCAGGTCGAGATGATTTTCAAGGTCCAGAACGGGTCCAAGACGGTGGCCCGATTTGAAGAGTATCGCGAAATGGTCAAGGCCAAGGCGGCAATGGGATGTCCCGCCGACGAGGAGAATGCCCGTTCTGTCGCCGACGGGAACGAGGTCATGAGGTTTCACTGCATGGGTCCGACATCCGACTGTGCAAAATACGACGGTAGCGGCGCCGCCGCCGGGTGGAGTTTCCCCGGGGTGAGAGGGTCGTCATCGTCGGCGATTTGCACTTTCGCCGGAAGTGGGGTAGCCCACGAGAACGCCGGCGGCGGAAGAGGGAGAAGAGCGATGTTGGTTTGTCGGGTCATCGCCGGTCGGGTCTCAAAGCAAGCGAAGAAACCCGACCCGTTTTTGGAAGCCCGAGTTGGCGTGGACTCGGTGAGTAGGGAAAACGGCGAGTTGCTCGTATTCGACTCGCGTGCAGTCCTCCCTTGTTTCCTCATCATCTACAAATTGTAA

Coding sequence (CDS)

ATGGCGTGGGTCAAATCCCTTCAGTGCAAATCCAGAGTCTTCGAAGACGTTTATCATCCAAGCCCTAAGAATCTAATCCCGAGTGCCAGCTGTCGGAAGGGCGTTCAGAGCCTCAAAGACGTCGTTGAAACCACCAAATCGAAGAACAAGAAGCCCAAACCCTCGCCGCCCGACAGAAAACCTGTTCCTCGAATCTCCAAATCAGAACCCGGATCGAGTCCCTGCACCCGCTCCAGAACCAGCGTTTCCTCTCGTTCATTGATAAGGCCCAACGATCTCCTCTTTCCGGCGCTTTCGGAGTTGCCGGAGGGCCATCATTCACGGAGCGTCGTCGAGATAATCTTCCACACCAGGTGGACCCCCAAGGCGTTTACGGGTCAGGTCGAGATGATTTTCAAGGTCCAGAACGGGTCCAAGACGGTGGCCCGATTTGAAGAGTATCGCGAAATGGTCAAGGCCAAGGCGGCAATGGGATGTCCCGCCGACGAGGAGAATGCCCGTTCTGTCGCCGACGGGAACGAGGTCATGAGGTTTCACTGCATGGGTCCGACATCCGACTGTGCAAAATACGACGGTAGCGGCGCCGCCGCCGGGTGGAGTTTCCCCGGGGTGAGAGGGTCGTCATCGTCGGCGATTTGCACTTTCGCCGGAAGTGGGGTAGCCCACGAGAACGCCGGCGGCGGAAGAGGGAGAAGAGCGATGTTGGTTTGTCGGGTCATCGCCGGTCGGGTCTCAAAGCAAGCGAAGAAACCCGACCCGTTTTTGGAAGCCCGAGTTGGCGTGGACTCGGTGAGTAGGGAAAACGGCGAGTTGCTCGTATTCGACTCGCGTGCAGTCCTCCCTTGTTTCCTCATCATCTACAAATTGTAA

Protein sequence

MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRKPVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHCMGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL

Homology

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BLAST of Carg08778 vs. NCBI nr
Match: XP_022958334.1 (uncharacterized protein LOC111459583 [Cucurbita moschata] >KAG6606185.1 hypothetical protein SDJN03_03502, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036132.1 hypothetical protein SDJN02_02933, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK
Sbjct: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60

Query: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120
           PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT
Sbjct: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120

Query: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180
           PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC
Sbjct: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180

Query: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240
           MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI
Sbjct: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240

Query: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 289

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BLAST of Carg08778 vs. NCBI nr
Match: XP_023534048.1 (uncharacterized protein LOC111795718 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.9 bits (1470), Expect = 6.4e-159
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK
Sbjct: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60

Query: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120
           PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT
Sbjct: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120

Query: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180
           PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC
Sbjct: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180

Query: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240
           MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGS VAHENAGGGRGRRAMLVCRVI
Sbjct: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSAVAHENAGGGRGRRAMLVCRVI 240

Query: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 289

[Close]

BLAST of Carg08778 vs. NCBI nr
Match: XP_022995459.1 (uncharacterized protein LOC111490989 [Cucurbita maxima])

HSP 1 Score: 562.8 bits (1449), Expect = 1.8e-156
Identity = 285/289 (98.62%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK
Sbjct: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60

Query: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120
           PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGH+SRSVVEIIFHTRWT
Sbjct: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHNSRSVVEIIFHTRWT 120

Query: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180
           PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC
Sbjct: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180

Query: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240
           MGPTSD AKYDGS AAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI
Sbjct: 181 MGPTSDSAKYDGSSAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240

Query: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           AGRVSKQAKKPDPFLE RVGVDSVSRENGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 AGRVSKQAKKPDPFLEGRVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 289

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BLAST of Carg08778 vs. NCBI nr
Match: XP_038874850.1 (uncharacterized protein LOC120067350 [Benincasa hispida])

HSP 1 Score: 495.7 bits (1275), Expect = 2.6e-136
Identity = 256/293 (87.37%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSR FEDVYHP+PKNLIPSASCRK VQSLKDVVETTKSKNKKPK SPP ++
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKNKKPKHSPPVKQ 60

Query: 61  PV---PRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHT 120
           PV   PR++KSEPGS+PCTR RTSVSSR LIR +DL+FPA++ELPEGHHSRSVVEIIFHT
Sbjct: 61  PVPKNPRLAKSEPGSTPCTRPRTSVSSRPLIRADDLIFPAVTELPEGHHSRSVVEIIFHT 120

Query: 121 RWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMR 180
            W+PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENAR VADGNEVMR
Sbjct: 121 SWSPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDCAKYDGSGAAAGWSFPGVRGSSSS-AICTFAGSGVAHENAGGGRGRRAMLV 240
           FHCMGPTSD AKYDG G A  WSF GVRGSSS+ AICTFAGSGVAHENAGGGRGRRAMLV
Sbjct: 181 FHCMGPTSDSAKYDGCGGA--WSFLGVRGSSSAVAICTFAGSGVAHENAGGGRGRRAMLV 240

Query: 241 CRVIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           CRVIAGRVSKQ  KPDPFLE RVG+DSVS ENGEL VFDSRAVLPCFLIIYKL
Sbjct: 241 CRVIAGRVSKQLVKPDPFLEGRVGLDSVSGENGELFVFDSRAVLPCFLIIYKL 291

[Close]

BLAST of Carg08778 vs. NCBI nr
Match: XP_008437118.1 (PREDICTED: uncharacterized protein LOC103482634 [Cucumis melo] >KAA0039692.1 putative zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa])

HSP 1 Score: 493.8 bits (1270), Expect = 1.0e-135
Identity = 251/293 (85.67%), Postives = 271/293 (92.49%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSR FEDVYHP+PKNLIPSASCRK VQSLKDVVETTKSK+KKPK SPP++K
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60

Query: 61  PV---PRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHT 120
           PV   PR++KSEPGS+PC+R R SVSSR LIR +DL+FPA+SELPEGHHSRSVVEIIFHT
Sbjct: 61  PVSKNPRLAKSEPGSTPCSRPRMSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120

Query: 121 RWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMR 180
            W+PKAFTG++EMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENAR VADGNEVMR
Sbjct: 121 SWSPKAFTGRIEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDCAKYDGSGAAAGWSFPGVRG-SSSSAICTFAGSGVAHENAGGGRGRRAMLV 240
           FHCMGPTSD AKYDG G A  WSFPG+RG SS++AICTFAGSGVAHENAGGGRGRRAMLV
Sbjct: 181 FHCMGPTSDSAKYDGCGGA--WSFPGMRGLSSTAAICTFAGSGVAHENAGGGRGRRAMLV 240

Query: 241 CRVIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           CRVIAGRVSKQ  KPDPF+E RVG+DSVS +NGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 CRVIAGRVSKQVVKPDPFVEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 291

[Close]

BLAST of Carg08778 vs. ExPASy TrEMBL
Match: A0A6J1H4S9 (uncharacterized protein LOC111459583 OS=Cucurbita moschata OX=3662 GN=LOC111459583 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.3e-160
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK
Sbjct: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60

Query: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120
           PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT
Sbjct: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120

Query: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180
           PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC
Sbjct: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180

Query: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240
           MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI
Sbjct: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240

Query: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 289

[Close]

BLAST of Carg08778 vs. ExPASy TrEMBL
Match: A0A6J1K5T8 (uncharacterized protein LOC111490989 OS=Cucurbita maxima OX=3661 GN=LOC111490989 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 8.5e-157
Identity = 285/289 (98.62%), Postives = 286/289 (98.96%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK
Sbjct: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60

Query: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRWT 120
           PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGH+SRSVVEIIFHTRWT
Sbjct: 61  PVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHNSRSVVEIIFHTRWT 120

Query: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180
           PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC
Sbjct: 121 PKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHC 180

Query: 181 MGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240
           MGPTSD AKYDGS AAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI
Sbjct: 181 MGPTSDSAKYDGSSAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCRVI 240

Query: 241 AGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           AGRVSKQAKKPDPFLE RVGVDSVSRENGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 AGRVSKQAKKPDPFLEGRVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 289

[Close]

BLAST of Carg08778 vs. ExPASy TrEMBL
Match: A0A5A7T889 (Putative zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00230 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.8e-136
Identity = 251/293 (85.67%), Postives = 271/293 (92.49%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSR FEDVYHP+PKNLIPSASCRK VQSLKDVVETTKSK+KKPK SPP++K
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60

Query: 61  PV---PRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHT 120
           PV   PR++KSEPGS+PC+R R SVSSR LIR +DL+FPA+SELPEGHHSRSVVEIIFHT
Sbjct: 61  PVSKNPRLAKSEPGSTPCSRPRMSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120

Query: 121 RWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMR 180
            W+PKAFTG++EMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENAR VADGNEVMR
Sbjct: 121 SWSPKAFTGRIEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDCAKYDGSGAAAGWSFPGVRG-SSSSAICTFAGSGVAHENAGGGRGRRAMLV 240
           FHCMGPTSD AKYDG G A  WSFPG+RG SS++AICTFAGSGVAHENAGGGRGRRAMLV
Sbjct: 181 FHCMGPTSDSAKYDGCGGA--WSFPGMRGLSSTAAICTFAGSGVAHENAGGGRGRRAMLV 240

Query: 241 CRVIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           CRVIAGRVSKQ  KPDPF+E RVG+DSVS +NGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 CRVIAGRVSKQVVKPDPFVEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 291

[Close]

BLAST of Carg08778 vs. ExPASy TrEMBL
Match: A0A1S3AT83 (uncharacterized protein LOC103482634 OS=Cucumis melo OX=3656 GN=LOC103482634 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.8e-136
Identity = 251/293 (85.67%), Postives = 271/293 (92.49%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSR FEDVYHP+PKNLIPSASCRK VQSLKDVVETTKSK+KKPK SPP++K
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPTPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60

Query: 61  PV---PRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHT 120
           PV   PR++KSEPGS+PC+R R SVSSR LIR +DL+FPA+SELPEGHHSRSVVEIIFHT
Sbjct: 61  PVSKNPRLAKSEPGSTPCSRPRMSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120

Query: 121 RWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMR 180
            W+PKAFTG++EMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENAR VADGNEVMR
Sbjct: 121 SWSPKAFTGRIEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDCAKYDGSGAAAGWSFPGVRG-SSSSAICTFAGSGVAHENAGGGRGRRAMLV 240
           FHCMGPTSD AKYDG G A  WSFPG+RG SS++AICTFAGSGVAHENAGGGRGRRAMLV
Sbjct: 181 FHCMGPTSDSAKYDGCGGA--WSFPGMRGLSSTAAICTFAGSGVAHENAGGGRGRRAMLV 240

Query: 241 CRVIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           CRVIAGRVSKQ  KPDPF+E RVG+DSVS +NGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 CRVIAGRVSKQVVKPDPFVEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 291

[Close]

BLAST of Carg08778 vs. ExPASy TrEMBL
Match: A0A0A0KR76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160780 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 252/293 (86.01%), Postives = 270/293 (92.15%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYHPSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPPDRK 60
           MAWVKSLQCKSR FEDVYHPSPKNLIPSASCRK VQSLKDVVETTKSK+KKPK SPP++K
Sbjct: 1   MAWVKSLQCKSRAFEDVYHPSPKNLIPSASCRKSVQSLKDVVETTKSKHKKPKHSPPEKK 60

Query: 61  PV---PRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHT 120
           PV   PR++KSEPGS+P +R R SVSSR LIR +DL+FPA+SELPEGHHSRSVVEIIFHT
Sbjct: 61  PVSKNPRLAKSEPGSTPSSRPRMSVSSRPLIRADDLIFPAVSELPEGHHSRSVVEIIFHT 120

Query: 121 RWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMR 180
            W+PKAFTG+VEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENAR VADGNEVMR
Sbjct: 121 SWSPKAFTGRVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARCVADGNEVMR 180

Query: 181 FHCMGPTSDCAKYDGSGAAAGWSFPGVRG-SSSSAICTFAGSGVAHENAGGGRGRRAMLV 240
           FHCMGPTSD AKYDG G A  WSFPG+RG SS++AICTFAGSGVAHENAGGGRGRRAMLV
Sbjct: 181 FHCMGPTSDSAKYDGCGGA--WSFPGMRGLSSAAAICTFAGSGVAHENAGGGRGRRAMLV 240

Query: 241 CRVIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           CRVIAGRVSKQ  KPDP+LE RVG+DSVS +NGELLVFDSRAVLPCFLIIYKL
Sbjct: 241 CRVIAGRVSKQVVKPDPYLEGRVGLDSVSGDNGELLVFDSRAVLPCFLIIYKL 291

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BLAST of Carg08778 vs. TAIR 10
Match: AT1G62520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12450.1); Has 388 Blast hits to 388 proteins in 26 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 8; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-78
Identity = 173/298 (58.05%), Postives = 208/298 (69.80%), Query Frame = 0


Query: 3   WVKSLQCKSRVFEDVYH----------PSPKNLIPSASCRKGVQSLKDVVETTKSKNKKP 62
           WVKSLQCKS+ F+DVY+          PSPK+L+ S SCRK  QSLKDV+ET     KKP
Sbjct: 5   WVKSLQCKSKAFDDVYNPIKNPNPNPSPSPKHLMSSYSCRKSTQSLKDVIET-----KKP 64

Query: 63  KPSPPDRKPVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVE 122
           KP P    P P   +++P  SP TR R++      +R  D   P L+EL EGH SR+VVE
Sbjct: 65  KPKPKKPNPKPDKRETDPVLSPSTRIRSTG-----VRDRDPFLPTLTELSEGHQSRNVVE 124

Query: 123 IIFHTRWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADG 182
           IIF T W PK F+G+VEMIFKVQNGSKT+ RFEEYRE VKA++     A EENARSVADG
Sbjct: 125 IIFQTSWGPKPFSGRVEMIFKVQNGSKTLTRFEEYREAVKARSV--GKAREENARSVADG 184

Query: 183 NEVMRFHCMGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRR 242
           NE MRF+C+GP+     Y G G+A  W   G +G  +S I TFAGS  A+E AGGG+GR+
Sbjct: 185 NETMRFYCLGPS-----YGGGGSA--WGILGGKGGGAS-IYTFAGSSTANEKAGGGKGRK 244

Query: 243 AMLVCRVIAGRVSKQAK-KPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           AMLVCRVIAGRV+KQ + K D  L +R   DSVS ++GELLVFD+RAVLPCFLIIY+L
Sbjct: 245 AMLVCRVIAGRVTKQNELKYDSDLRSR--FDSVSGDDGELLVFDTRAVLPCFLIIYRL 280

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BLAST of Carg08778 vs. TAIR 10
Match: AT4G12450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22560.1); Has 380 Blast hits to 380 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 374; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 235.3 bits (599), Expect = 6.0e-62
Identity = 142/299 (47.49%), Postives = 188/299 (62.88%), Query Frame = 0


Query: 1   MAWVKSLQCKSRVFEDVYH---PSPKNLIPSASCRKGVQSLKDVVETTKSKNKKPKPSPP 60
           + WVKSL CKS+ F+DVYH      K L+PS SCRK V+ + +    T  KN KP PS  
Sbjct: 3   IGWVKSLHCKSKAFDDVYHHHSNKGKLLLPSYSCRKNVRDVVNTQPGTVKKNPKPDPS-- 62

Query: 61  DRKPVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHT 120
             + +    + E  S+    +R SVS+R+    ++ + P L++LP+GH SR+VVEIIF +
Sbjct: 63  -LRRLCSSRRPELDSNSHHPTRRSVSARA---SSESVLPVLTDLPDGHPSRNVVEIIFQS 122

Query: 121 RWTPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAMGCPAD-------EENARSVA 180
            W+   F G+VEMIFKV+NGSK V RFEEYRE VK+++     +D       +ENAR  A
Sbjct: 123 SWSSDEFPGRVEMIFKVENGSKAVTRFEEYREAVKSRSCSKVDSDRVDGSACDENARCSA 182

Query: 181 DGNEVMRFHCMGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRG 240
           DGNE+MRF  +GP        G      W FPG +G   +A+CTF+GSG AH + GGG G
Sbjct: 183 DGNEMMRFFPLGP------IPGGINGGAWGFPGGKG---AAVCTFSGSGEAHASTGGGGG 242

Query: 241 RRAMLVCRVIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           RRAML+CRVIAGRV+K+ +          G DSV+   GEL+VFD+RAVLPCFLI ++L
Sbjct: 243 RRAMLICRVIAGRVAKKGE---------FGSDSVAGRAGELIVFDARAVLPCFLIFFRL 277

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BLAST of Carg08778 vs. TAIR 10
Match: AT4G22560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12450.1); Has 380 Blast hits to 380 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 374; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 216.1 bits (549), Expect = 3.8e-56
Identity = 138/291 (47.42%), Postives = 191/291 (65.64%), Query Frame = 0


Query: 3   WVKSLQCKSRVFEDVYHPSPKNLIPSAS---CRKGVQSLKDVVETTKSKNKKPKPSPPDR 62
           W+KSLQCKS+ F+DVY+ + K+L+ S+S    RK    +KDV++T  SK K  KP P  R
Sbjct: 5   WIKSLQCKSKAFDDVYNFNSKSLMSSSSYNCSRKSSHCVKDVIDTRLSK-KNQKPDPNLR 64

Query: 63  KPVPRISKSEPGSSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRW 122
           +     +++E   +P  R+R S S+R+          AL+ELP+GH SR+VVEIIFH+ W
Sbjct: 65  RFKSCRTETEL-LNPPNRTRRSKSART--------SDALTELPDGHPSRNVVEIIFHSSW 124

Query: 123 TPKAFTGQVEMIFKVQNGSKTVARFEEYREMVKAKAAM-GCPADEENARSVADGNEVMRF 182
           +   F G++EMIFKV++GS+TV RFEEYRE+VK++A   G   +EE+AR +ADGNE+MRF
Sbjct: 125 SSDEFPGRIEMIFKVEHGSRTVTRFEEYREVVKSRAGFNGGTCEEEDARCLADGNEMMRF 184

Query: 183 HCMGPTSDCAKYDGSGAAAGWSFPGVRGSSSSAICTFAGSGVAHENAGGGRGRRAMLVCR 242
           +   P  D   ++G        F G +G    A+CTF+GSG A+ ++GGG GR+AM++CR
Sbjct: 185 Y---PVLD--GFNGGACV----FAGGKG---QAVCTFSGSGEAYVSSGGGGGRKAMMICR 244

Query: 243 VIAGRVSKQAKKPDPFLEARVGVDSVSRENGELLVFDSRAVLPCFLIIYKL 290
           VIAGRV               G DSV+  +GEL VFD+RAVLPCFLII++L
Sbjct: 245 VIAGRVDD---------VIGFGSDSVAGRDGELFVFDTRAVLPCFLIIFRL 264

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BLAST of Carg08778 vs. TAIR 10
Match: AT1G75710.1 (C2H2-like zinc finger protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 85/236 (36.02%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 97  ALSELPEGHHSRSVVEIIFHTRWTPK-AFTGQVEMIFKVQNGSKTVARFEEYREMVKAKA 156
           A+SEL      R++VEIIF + W  K +   Q+E I KV N  +T+ RFE+ R+ VKA+A
Sbjct: 228 AVSELGPEDSGRNIVEIIFKSSWLKKDSPICQIERILKVHNTQRTIQRFEDCRDAVKARA 287

Query: 157 AMGCPADEENARSVADGNEVMRFHCMGPTSDCAKYDGSGAAAGWSFPGV--------RGS 216
                A  ++AR  ADGNE++RFHC   T        S   +     GV        +G 
Sbjct: 288 LQ---ATRKDARCAADGNELLRFHCTTLTCSLGARGSSSLCSNLPVCGVCTVIRHGFQGK 347

Query: 217 SSSAICTFAGSGVAHENAGGGR----------GRRAMLVCRVIAGRVSK----------- 276
           S       A +GV    A  GR           RR MLVCRVIAGRV +           
Sbjct: 348 SGGGGANVANAGV-RTTASSGRADDLLRCSDDARRVMLVCRVIAGRVKRVDLPAADASAT 407

Query: 277 QAKKPDPFLEARVGV-------DSVSRENG------ELLVFDSRAVLPCFLIIYKL 290
             KK      + VGV       DSV+   G      EL+V++ RA+LPCF++IYK+
Sbjct: 408 AEKKSTVEDNSVVGVSSSGGTFDSVAVNAGVYSNLEELVVYNPRAILPCFVVIYKV 459

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BLAST of Carg08778 vs. TAIR 10
Match: AT4G27240.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-21
Identity = 84/241 (34.85%), Postives = 124/241 (51.45%), Query Frame = 0


Query: 72  SSPCTRSRTSVSSRSLIRPNDLLFPALSELPEGHHSRSVVEIIFHTRW-TPKAFTGQVEM 131
           S  C +     S       + L   A++EL EG  SR +VEII  T W   +   G+++ 
Sbjct: 195 SVSCHKCGEKFSKLEAAEAHHLTKHAVTELMEGDSSRRIVEIICRTSWLKTENQGGRIDR 254

Query: 132 IFKVQNGSKTVARFEEYREMVKAKAAMGCPADEENARSVADGNEVMRFHCMGPTSDCA-K 191
           I KV N  KT+ARFEEYR+ VK +A+      +++ R +ADGNE++RFH  G T  CA  
Sbjct: 255 ILKVHNMQKTLARFEEYRDTVKIRAS---KLQKKHPRCIADGNELLRFH--GTTVACALG 314

Query: 192 YDGSGAAAGW-----------SFPGVRGSSSS-AICTFAGSGVAHENA----GGGRGRRA 251
            +GS +                F   R  ++   + T + S  A E+     GGG  R+A
Sbjct: 315 INGSTSLCSSEKCCVCRIIRNGFSAKREMNNGIGVFTASTSERAFESIVIGDGGGGDRKA 374

Query: 252 MLVCRVIAGRVSKQAKKPDPFLEARVGVDSVSRENG------ELLVFDSRAVLPCFLIIY 289
           ++VCRVIAGRV +  +  +       G DS++ + G      EL + +SRA+LPCF++I 
Sbjct: 375 LIVCRVIAGRVHRPVENVEEMGGLLSGFDSLAGKVGLYTNVEELYLLNSRALLPCFVLIC 430

The following BLAST results are available for this feature:

BLAST of Carg08778 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958334.1	1.3e-159	100.00	uncharacterized protein LOC111459583 [Cucurbita moschata] >KAG6606185.1 hypothet...	[more]
XP_023534048.1	6.4e-159	99.65	uncharacterized protein LOC111795718 [Cucurbita pepo subsp. pepo]	[more]
XP_022995459.1	1.8e-156	98.62	uncharacterized protein LOC111490989 [Cucurbita maxima]	[more]
XP_038874850.1	2.6e-136	87.37	uncharacterized protein LOC120067350 [Benincasa hispida]	[more]
XP_008437118.1	1.0e-135	85.67	PREDICTED: uncharacterized protein LOC103482634 [Cucumis melo] >KAA0039692.1 put...	[more]

BLAST of Carg08778 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4S9	6.3e-160	100.00	uncharacterized protein LOC111459583 OS=Cucurbita moschata OX=3662 GN=LOC1114595...	[more]
A0A6J1K5T8	8.5e-157	98.62	uncharacterized protein LOC111490989 OS=Cucurbita maxima OX=3661 GN=LOC111490989...	[more]
A0A5A7T889	4.8e-136	85.67	Putative zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3AT83	4.8e-136	85.67	uncharacterized protein LOC103482634 OS=Cucumis melo OX=3656 GN=LOC103482634 PE=...	[more]
A0A0A0KR76	2.4e-135	86.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160780 PE=4 SV=1	[more]

BLAST of Carg08778 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62520.1	1.6e-78	58.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G12450.1	6.0e-62	47.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G22560.1	3.8e-56	47.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75710.1	1.3e-21	36.02	C2H2-like zinc finger protein	[more]
AT4G27240.1	1.8e-21	34.85	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.228.10		coord: 97..288 e-value: 9.1E-13 score: 50.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..84
None	No IPR available	PANTHER	PTHR31681	C2H2-LIKE ZINC FINGER PROTEIN	coord: 2..288
None	No IPR available	PANTHER	PTHR31681:SF47	SULFATED SURFACE-LIKE GLYCOPROTEIN	coord: 2..288
None	No IPR available	SUPERFAMILY	56399	ADP-ribosylation	coord: 98..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08778-RA	Carg08778-RA	mRNA