Carg08775 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAATGTTGAACATGTTCTGGGAAAAACAAGTTGCACGTTGTTCGGGAAGTGGACGATAGCGCATGTATTATGTAAATGGTCACGAGAATGTAAAATTCAAAGAGTTGTGATGGTGGTACTTTGTTATGGAACAAGCAGTGAACCGCCGCATGATCCGACTCGATACACAATTGACTTCAATTTTCAATCACTTCTGAATGAGCTGACACCGGGGTCAAGTTGAAATCAGTCTTATTACCATGTACCCTACTTTTGTGTATCTCTAATTGTGATGTATAGCTTTGTCTGATATTGGATATTTGAATCATGGATTAAGGAGATGCTCCCTCCCACGGATTCCCAGACTCCCGACCAGACCAACGACATCTAGAAAGAGGCGAGTACGATAAAGCCCAATGCCGAGAAGCTACGGTTGGAACAAAGGCAAAGAATTGTGTACGTCAAGCTCTTCTTTTTGCATGCTTTTTTAAATTTTCTACCTGCATGATTCATTGCCGTTCGTGTATTTCAGTCGAGGAAGTTACAAGAGAAGGGTGGAAAGCCAAGATGGTTCGAGAGAAAGGGGAAGAATGGCCTTTAGGTATGCTGGAGGAATTGGGAAGCAAGGAACGCAAGCAAATGGGATGATTGCCCAAGACCATATTTTTGGGGAATTGAATCATTAGGAGGATTCTGGATATTAATGATATGTGTAATTGTTGTACGGCCATTTCTTTTCATATTTTGCAAGGTATATGTTTGGGGGAGAGGGGTTGGGTCGTCCCATCTGATAGCTTCTGTTGTAATCTCTTCCTAATGCAAAATGCAAAAGAAAAAAGGGACAATATATTGATCTACCCAAATCTTGCTTCCCAAGTTAGATCCACACCAATTTG ATGGATAATGTTGAACATGTTCTGGGAAAAACAAGTTGCACGTTGTTCGGGAAGTGGACGATAGCGCATGTATTATGTAAATGGTCACGAGAATGTAAAATTCAAAGAGTTGTGATGGTGGTACTTTGTTATGGAACAAGCAGTGAACCGCCGCATGATCCGACTCGATACACAATTGACTTCAATTTTCAATCACTTCTGAATGAGCTGACACCGGGGTCAAGAGATGCTCCCTCCCACGGATTCCCAGACTCCCGACCAGACCAACGACATCTAGAAAGAGGCGAGTACGATAAAGCCCAATGCCGAGAAGCTACGGTTGGAACAAAGGCAAAGAATTGTGTACGTCAAGCTCTTCTTTTTGCATGCTTTTTTAAATTTTCTACCTGCATGATTCATTGCCGTTCGTGTATTTCAGTCGAGGAAGTTACAAGAGAAGGGTGGAAAGCCAAGATGGTTCGAGAGAAAGGGGAAGAATGGCCTTTAGGTATGCTGGAGGAATTGGGAAGCAAGGAACGCAAGCAAATGGGATGATTGCCCAAGACCATATTTTTGGGGAATTGAATCATTAGGAGGATTCTGGATATTAATGATATGTGTAATTGTTGTACGGCCATTTCTTTTCATATTTTGCAAGGTATATGTTTGGGGGAGAGGGGTTGGGTCGTCCCATCTGATAGCTTCTGTTGTAATCTCTTCCTAATGCAAAATGCAAAAGAAAAAAGGGACAATATATTGATCTACCCAAATCTTGCTTCCCAAGTTAGATCCACACCAATTTG ATGGATAATGTTGAACATGTTCTGGGAAAAACAAGTTGCACGTTGTTCGGGAAGTGGACGATAGCGCATGTATTATGTAAATGGTCACGAGAATGTAAAATTCAAAGAGTTGTGATGGTGGTACTTTGTTATGGAACAAGCAGTGAACCGCCGCATGATCCGACTCGATACACAATTGACTTCAATTTTCAATCACTTCTGAATGAGCTGACACCGGGGTCAAGAGATGCTCCCTCCCACGGATTCCCAGACTCCCGACCAGACCAACGACATCTAGAAAGAGGCGAGTACGATAAAGCCCAATGCCGAGAAGCTACGGTTGGAACAAAGGCAAAGAATTGTGTACGTCAAGCTCTTCTTTTTGCATGCTTTTTTAAATTTTCTACCTGCATGATTCATTGCCGTTCGTGTATTTCAGTCGAGGAAGTTACAAGAGAAGGGTGGAAAGCCAAGATGGTTCGAGAGAAAGGGGAAGAATGGCCTTTAGGTATGCTGGAGGAATTGGGAAGCAAGGAACGCAAGCAAATGGGATGA MDNVEHVLGKTSCTLFGKWTIAHVLCKWSRECKIQRVVMVVLCYGTSSEPPHDPTRYTIDFNFQSLLNELTPGSRDAPSHGFPDSRPDQRHLERGEYDKAQCREATVGTKAKNCVRQALLFACFFKFSTCMIHCRSCISVEEVTREGWKAKMVREKGEEWPLGMLEELGSKERKQMG Homology
BLAST of Carg08775 vs. NCBI nr
Match: KAG7036129.1 (Oxysterol-binding protein-related protein 2A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Carg08775 vs. NCBI nr
Match: XP_023533672.1 (oxysterol-binding protein-related protein 2B-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533673.1 oxysterol-binding protein-related protein 2B-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 78.2 bits (191), Expect = 8.0e-11 Identity = 46/101 (45.54%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Carg08775 vs. NCBI nr
Match: XP_022958368.1 (oxysterol-binding protein-related protein 2B-like [Cucurbita moschata]) HSP 1 Score: 78.2 bits (191), Expect = 8.0e-11 Identity = 46/101 (45.54%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Carg08775 vs. NCBI nr
Match: KAG6606183.1 (Oxysterol-binding protein-related protein 2A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.2 bits (191), Expect = 8.0e-11 Identity = 46/101 (45.54%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Carg08775 vs. NCBI nr
Match: XP_022995456.1 (oxysterol-binding protein-related protein 2B-like [Cucurbita maxima]) HSP 1 Score: 74.3 bits (181), Expect = 1.2e-09 Identity = 45/101 (44.55%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy Swiss-Prot
Match: Q940Y1 (Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana OX=3702 GN=ORP2A PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.8e-09 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy Swiss-Prot
Match: Q8L751 (Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=ORP1C PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.3e-07 Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy Swiss-Prot
Match: Q9SU36 (Oxysterol-binding protein-related protein 2B OS=Arabidopsis thaliana OX=3702 GN=ORP2B PE=2 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06 Identity = 37/97 (38.14%), Postives = 48/97 (49.48%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy Swiss-Prot
Match: O80866 (Oxysterol-binding protein-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=ORP1A PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05 Identity = 36/97 (37.11%), Postives = 49/97 (50.52%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy Swiss-Prot
Match: Q8S8P9 (Oxysterol-binding protein-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=ORP1B PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.8e-05 Identity = 32/97 (32.99%), Postives = 50/97 (51.55%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy TrEMBL
Match: A0A6J1H2X1 (oxysterol-binding protein-related protein 2B-like OS=Cucurbita moschata OX=3662 GN=LOC111459612 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 3.9e-11 Identity = 46/101 (45.54%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy TrEMBL
Match: A0A6J1K1Z0 (oxysterol-binding protein-related protein 2B-like OS=Cucurbita maxima OX=3661 GN=LOC111490987 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 5.6e-10 Identity = 45/101 (44.55%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy TrEMBL
Match: M1A0P6 (Oxysterol-binding family protein OS=Solanum tuberosum OX=4113 GN=102578345 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.6e-09 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy TrEMBL
Match: A0A0V0IVC5 (Putative oxysterol-binding protein-related protein 2A-like OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.6e-09 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of Carg08775 vs. ExPASy TrEMBL
Match: M1A0P8 (Oxysterol-binding family protein OS=Solanum tuberosum OX=4113 GN=102578345 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.6e-09 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of Carg08775 vs. TAIR 10
Match: AT4G22540.2 (OSBP(oxysterol binding protein)-related protein 2A ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of Carg08775 vs. TAIR 10
Match: AT4G22540.1 (OSBP(oxysterol binding protein)-related protein 2A ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of Carg08775 vs. TAIR 10
Match: AT4G22540.3 (OSBP(oxysterol binding protein)-related protein 2A ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of Carg08775 vs. TAIR 10
Match: AT4G22540.4 (OSBP(oxysterol binding protein)-related protein 2A ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of Carg08775 vs. TAIR 10
Match: AT4G08180.3 (OSBP(oxysterol binding protein)-related protein 1C ) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08 Identity = 36/115 (31.30%), Postives = 58/115 (50.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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