Carg08759 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08759
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB44-like
Location	Carg_Chr09: 881289 .. 881963 (-)
RNA-Seq Expression	Carg08759
Synteny	Carg08759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATTCAAAATTCCTCTTATTCCTCTTCCACCTCCGAGTCCTATTCCTCCGATTCCTCTCACTCCGGCAAGCCCTCGCCGGTAAACTCCGCCGTCACTGATAAAATCAAAGGCCCATGGAGCGCCGAAGAGGATCGGGTCCTGACCCGACTCGTCGACCGCTACGGCCCTAGAAATTGGTCTTTAATTAGTAGATACGTAAAGGGCCGCTCTGGAAAATCCTGCCGGCTCCGTTGGTGTAACCAGCTCTGTCCCGGCGTCGAGCACCACCCTTTCTCCCAGGCGGAGGATGACGCCATCATCGCTGCCCATGCCCGCTACGGCAACCGGTGGGCCACCATTGCTCGCCTCCTCCCTGGGCGAACCGATAATGCCGTCAAAAACCACTGGAACTCCACTCTCAAACGCCGAGTCAGAAACGACAGAAAATCCGCCGGTAATCGCACTTCGGACGTGGGTGGGGGTTCGTTGGTGGGCGTCAATGACGACCCATTGACCGAGCTAACTCTGGCCACTCCGGGAATGGATGCGGGAGGTGACGTGGCGGTGGAGTCCGACCGCAGGAGGGAGAGTATGCCGGCGGGATTCTGGGAAGCGATGAGGGACGTTGTAGCGAGGGAGGTGAGAGAGTACATGACGACGACGTTTTCGGAAAATCCGGGATTTCATTAA

mRNA sequence

ATGGACATTCAAAATTCCTCTTATTCCTCTTCCACCTCCGAGTCCTATTCCTCCGATTCCTCTCACTCCGGCAAGCCCTCGCCGGTAAACTCCGCCGTCACTGATAAAATCAAAGGCCCATGGAGCGCCGAAGAGGATCGGGTCCTGACCCGACTCGTCGACCGCTACGGCCCTAGAAATTGGTCTTTAATTAGTAGATACGTAAAGGGCCGCTCTGGAAAATCCTGCCGGCTCCGTTGGTGTAACCAGCTCTGTCCCGGCGTCGAGCACCACCCTTTCTCCCAGGCGGAGGATGACGCCATCATCGCTGCCCATGCCCGCTACGGCAACCGGTGGGCCACCATTGCTCGCCTCCTCCCTGGGCGAACCGATAATGCCGTCAAAAACCACTGGAACTCCACTCTCAAACGCCGAGTCAGAAACGACAGAAAATCCGCCGGTAATCGCACTTCGGACGTGGGTGGGGGTTCGTTGGTGGGCGTCAATGACGACCCATTGACCGAGCTAACTCTGGCCACTCCGGGAATGGATGCGGGAGGTGACGTGGCGGTGGAGTCCGACCGCAGGAGGGAGAGTATGCCGGCGGGATTCTGGGAAGCGATGAGGGACGTTGTAGCGAGGGAGGTGAGAGAGTACATGACGACGACGTTTTCGGAAAATCCGGGATTTCATTAA

Coding sequence (CDS)

ATGGACATTCAAAATTCCTCTTATTCCTCTTCCACCTCCGAGTCCTATTCCTCCGATTCCTCTCACTCCGGCAAGCCCTCGCCGGTAAACTCCGCCGTCACTGATAAAATCAAAGGCCCATGGAGCGCCGAAGAGGATCGGGTCCTGACCCGACTCGTCGACCGCTACGGCCCTAGAAATTGGTCTTTAATTAGTAGATACGTAAAGGGCCGCTCTGGAAAATCCTGCCGGCTCCGTTGGTGTAACCAGCTCTGTCCCGGCGTCGAGCACCACCCTTTCTCCCAGGCGGAGGATGACGCCATCATCGCTGCCCATGCCCGCTACGGCAACCGGTGGGCCACCATTGCTCGCCTCCTCCCTGGGCGAACCGATAATGCCGTCAAAAACCACTGGAACTCCACTCTCAAACGCCGAGTCAGAAACGACAGAAAATCCGCCGGTAATCGCACTTCGGACGTGGGTGGGGGTTCGTTGGTGGGCGTCAATGACGACCCATTGACCGAGCTAACTCTGGCCACTCCGGGAATGGATGCGGGAGGTGACGTGGCGGTGGAGTCCGACCGCAGGAGGGAGAGTATGCCGGCGGGATTCTGGGAAGCGATGAGGGACGTTGTAGCGAGGGAGGTGAGAGAGTACATGACGACGACGTTTTCGGAAAATCCGGGATTTCATTAA

Protein sequence

MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGGDVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH

Homology

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BLAST of Carg08759 vs. NCBI nr
Match: KAG7024234.1 (Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454.1 bits (1167), Expect = 6.8e-124
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN
Sbjct: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180
           GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180

Query: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 225
           DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH
Sbjct: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 224

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BLAST of Carg08759 vs. NCBI nr
Match: KAG6591358.1 (Transcription factor MYB73, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           MDI+NSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN
Sbjct: 1   MDIRNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180
           GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180

Query: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 225
           DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH
Sbjct: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 224

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BLAST of Carg08759 vs. NCBI nr
Match: XP_022937009.1 (transcription factor MYB44-like [Cucurbita moschata])

HSP 1 Score: 444.5 bits (1142), Expect = 5.4e-121
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAV DKIKGPWSAEEDRVLTRLVDRYGPRN
Sbjct: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVPDKIKGPWSAEEDRVLTRLVDRYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180
           GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGM AGG
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMGAGG 180

Query: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF 224
           +VAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF
Sbjct: 181 EVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF 223

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BLAST of Carg08759 vs. NCBI nr
Match: XP_022976001.1 (transcription factor MYB44-like [Cucurbita maxima])

HSP 1 Score: 440.7 bits (1132), Expect = 7.8e-120
Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           MDIQNSSYSSSTS+S SSDSSHSGKPSP NSAV DKIKGPWSAEEDRVLTRLVDRYGPRN
Sbjct: 1   MDIQNSSYSSSTSDSSSSDSSHSGKPSPPNSAVPDKIKGPWSAEEDRVLTRLVDRYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180
           GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSD+GGGSL+GVNDDPLTELTLATPGMDAGG
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDMGGGSLLGVNDDPLTELTLATPGMDAGG 180

Query: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 225
           DVAVE DRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH
Sbjct: 181 DVAVECDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 224

[Close]

BLAST of Carg08759 vs. NCBI nr
Match: XP_023536385.1 (transcription factor MYB73-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.7 bits (1132), Expect = 7.8e-120
Identity = 218/224 (97.32%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           MDIQNSSYSSSTS+S SSDSSHSGKPSPVNSAV DKIKGPWSAEEDRVLTRLV+RYGPRN
Sbjct: 1   MDIQNSSYSSSTSDSSSSDSSHSGKPSPVNSAVPDKIKGPWSAEEDRVLTRLVERYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180
           GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180

Query: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 225
           DVAVESD RRESMPAGFWEAMR VVAREVREYMTTTFSENPGFH
Sbjct: 181 DVAVESDSRRESMPAGFWEAMRGVVAREVREYMTTTFSENPGFH 224

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BLAST of Carg08759 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.5e-44
Identity = 92/169 (54.44%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 35  DKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFS 94
           ++IKGPWS EED +L RLV ++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEH  FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 95  QAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRNDRKSA-------- 154
           Q ED+ II AHAR+GN+WATI+RLL GRTDNA+KNHWNSTLKR+   + +S         
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGGNGGY 129

Query: 155 -GN--------RTSDVGGGSLVGVNDDPLTELTLATPGMDAGGDVAVES 187
            GN        RT+  GGG   G+           +PG  +G DV+ +S
Sbjct: 130 DGNLGEEQPLKRTASGGGGVSTGL---------YMSPGSPSGSDVSEQS 169

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BLAST of Carg08759 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 86/155 (55.48%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 33  VTDKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHP 92
           + D+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEH P
Sbjct: 1   MADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRP 60

Query: 93  FSQAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRN-DRKSAGNRTS 152
           FS  ED+ I  AHA++GN+WATIARLL GRTDNAVKNHWNSTLKR+    D +       
Sbjct: 61  FSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSED 120

Query: 153 DVGGGSLVGVNDDPLTELTLATPGMDAGGDVAVES 187
                  V     P+      +PG   G DV+  S
Sbjct: 121 HRPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSS 155

[Close]

BLAST of Carg08759 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-42
Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 33  VTDKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHP 92
           + D++KGPWS EED  L R+V++YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEH P
Sbjct: 1   MADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRP 60

Query: 93  FSQAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 139
           FS  ED+ I+ A A++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 61  FSPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Carg08759 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.3e-40
Identity = 83/149 (55.70%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 35  DKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFS 94
           D++KGPWS EED VL+ LV R G RNWS I+R + GRSGKSCRLRWCNQL P +  + F+
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 95  QAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVG 154
           + ED AIIAAHA +GN+WA IA+LLPGRTDNA+KNHWNS L+RR  +  K+      ++G
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRRFIDFEKA-----KNIG 171

Query: 155 GGSLVGVND---DPLTELTLATPGMDAGG 181
            GSLV V+D   D  T +  +   + +GG
Sbjct: 172 TGSLV-VDDSGFDRTTTVASSEETLSSGG 194

[Close]

BLAST of Carg08759 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.9e-34
Identity = 70/132 (53.03%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 7   SYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRNWSLISR 66
           S+ ++  ++  ++ +   K S  N     K+KGPW  E+D  LTRLV   GPRNW+LISR
Sbjct: 20  SFENAIHKAVEAELAELAK-SDANGGGKSKVKGPWLPEQDEALTRLVKMCGPRNWNLISR 79

Query: 67  YVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLPGRTDNA 126
            + GRSGKSCRLRWCNQL P ++  PFS  E+  I++A A  GN+W+ IA+LLPGRTDNA
Sbjct: 80  GIPGRSGKSCRLRWCNQLDPILKRKPFSDEEEHMIMSAQAVLGNKWSVIAKLLPGRTDNA 139

Query: 127 VKNHWNSTLKRR 139
           +KNHWNS L+R+
Sbjct: 140 IKNHWNSNLRRK 150

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BLAST of Carg08759 vs. ExPASy TrEMBL
Match: A0A6J1F9Y3 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111443433 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAV DKIKGPWSAEEDRVLTRLVDRYGPRN
Sbjct: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVPDKIKGPWSAEEDRVLTRLVDRYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180
           GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGM AGG
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMGAGG 180

Query: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF 224
           +VAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF
Sbjct: 181 EVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF 223

[Close]

BLAST of Carg08759 vs. ExPASy TrEMBL
Match: A0A6J1IFQ1 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111476533 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 3.8e-120
Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           MDIQNSSYSSSTS+S SSDSSHSGKPSP NSAV DKIKGPWSAEEDRVLTRLVDRYGPRN
Sbjct: 1   MDIQNSSYSSSTSDSSSSDSSHSGKPSPPNSAVPDKIKGPWSAEEDRVLTRLVDRYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVGGGSLVGVNDDPLTELTLATPGMDAGG 180
           GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSD+GGGSL+GVNDDPLTELTLATPGMDAGG
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDMGGGSLLGVNDDPLTELTLATPGMDAGG 180

Query: 181 DVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 225
           DVAVE DRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH
Sbjct: 181 DVAVECDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGFH 224

[Close]

BLAST of Carg08759 vs. ExPASy TrEMBL
Match: A0A5A7V9U0 (Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003670 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.5e-96
Identity = 182/225 (80.89%), Postives = 197/225 (87.56%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           M+I N S S STSES SSDSS SGKP P  S + DKIKGPWSAEEDRVLTRLV+RYGPRN
Sbjct: 1   MNIHNFSSSPSTSESSSSDSSLSGKPPPQTSPIPDKIKGPWSAEEDRVLTRLVERYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEH PFS AEDDAIIAAH+RYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRK-SAGNRTSDVGG-GSLVGVNDDPLTELTLATPGMDA 180
           GRTDNAVKNHWNSTLKRRV++DR+ S+ N TSDVGG GS + V+DDPLT LTLATPG+  
Sbjct: 121 GRTDNAVKNHWNSTLKRRVKDDRRNSSSNHTSDVGGSGSFLAVDDDPLTALTLATPGIVG 180

Query: 181 GGDVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF 224
           GG+V  E+DR  ES+P GFWE M+DVVAREVREYMTTTFSENPGF
Sbjct: 181 GGEVVRETDRVSESLPTGFWEVMKDVVAREVREYMTTTFSENPGF 225

[Close]

BLAST of Carg08759 vs. ExPASy TrEMBL
Match: A0A1S3BV53 (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.5e-96
Identity = 182/225 (80.89%), Postives = 197/225 (87.56%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           M+I N S S STSES SSDSS SGKP P  S + DKIKGPWSAEEDRVLTRLV+RYGPRN
Sbjct: 1   MNIHNFSSSPSTSESSSSDSSLSGKPPPQTSPIPDKIKGPWSAEEDRVLTRLVERYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEH PFS AEDDAIIAAH+RYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHSRYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRK-SAGNRTSDVGG-GSLVGVNDDPLTELTLATPGMDA 180
           GRTDNAVKNHWNSTLKRRV++DR+ S+ N TSDVGG GS + V+DDPLT LTLATPG+  
Sbjct: 121 GRTDNAVKNHWNSTLKRRVKDDRRNSSSNHTSDVGGSGSFLAVDDDPLTALTLATPGIVG 180

Query: 181 GGDVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF 224
           GG+V  E+DR  ES+P GFWE M+DVVAREVREYMTTTFSENPGF
Sbjct: 181 GGEVVRETDRVSESLPTGFWEVMKDVVAREVREYMTTTFSENPGF 225

[Close]

BLAST of Carg08759 vs. ExPASy TrEMBL
Match: A0A0A0L4S7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638510 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.5e-95
Identity = 182/228 (79.82%), Postives = 199/228 (87.28%), Query Frame = 0


Query: 1   MDIQNSSYSSSTSESYSSDSSHSGKPSPVNSAVTDKIKGPWSAEEDRVLTRLVDRYGPRN 60
           M+I N S S+STSES SSDSS SGKP P +S + DKIKGPWSAEEDR+LTRLV+RYGPRN
Sbjct: 1   MNIHNFSSSTSTSESSSSDSSLSGKPPPSSSPIPDKIKGPWSAEEDRILTRLVERYGPRN 60

Query: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFSQAEDDAIIAAHARYGNRWATIARLLP 120
           WSLISRYVKGRSGKSCRLRWCNQLCPGVEH PFS AEDDAI+AAH+RYGNRWATIARLLP
Sbjct: 61  WSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIVAAHSRYGNRWATIARLLP 120

Query: 121 GRTDNAVKNHWNSTLKRRVRNDRK-SAGNRTSDV--GGGSLVGVNDDPLTELTLATPGM- 180
           GRTDNAVKNHWNSTLKRRVR+DR+ S+ N TSDV  GGGS + V+DDPLT LTLATPG  
Sbjct: 121 GRTDNAVKNHWNSTLKRRVRDDRRNSSSNHTSDVVGGGGSFLAVDDDPLTALTLATPGNV 180

Query: 181 -DAGGDVAVESDRRRESMPAGFWEAMRDVVAREVREYMTTTFSENPGF 224
              GG+V  ESDRR E++PAGFWE M+DVVAREVREYMTTTFSEN GF
Sbjct: 181 GGGGGEVVRESDRRSENLPAGFWEVMKDVVAREVREYMTTTFSENRGF 228

[Close]

BLAST of Carg08759 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 178.3 bits (451), Expect = 6.7e-45
Identity = 92/169 (54.44%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 35  DKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFS 94
           ++IKGPWS EED +L RLV ++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEH  FS
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 95  QAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRNDRKSA-------- 154
           Q ED+ II AHAR+GN+WATI+RLL GRTDNA+KNHWNSTLKR+   + +S         
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGGNGGY 129

Query: 155 -GN--------RTSDVGGGSLVGVNDDPLTELTLATPGMDAGGDVAVES 187
            GN        RT+  GGG   G+           +PG  +G DV+ +S
Sbjct: 130 DGNLGEEQPLKRTASGGGGVSTGL---------YMSPGSPSGSDVSEQS 169

[Close]

BLAST of Carg08759 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 174.9 bits (442), Expect = 7.4e-44
Identity = 86/155 (55.48%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 33  VTDKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHP 92
           + D+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEH P
Sbjct: 1   MADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRP 60

Query: 93  FSQAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRN-DRKSAGNRTS 152
           FS  ED+ I  AHA++GN+WATIARLL GRTDNAVKNHWNSTLKR+    D +       
Sbjct: 61  FSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSED 120

Query: 153 DVGGGSLVGVNDDPLTELTLATPGMDAGGDVAVES 187
                  V     P+      +PG   G DV+  S
Sbjct: 121 HRPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSS 155

[Close]

BLAST of Carg08759 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-43
Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 33  VTDKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHP 92
           + D++KGPWS EED  L R+V++YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEH P
Sbjct: 1   MADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRP 60

Query: 93  FSQAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR 139
           FS  ED+ I+ A A++GN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 61  FSPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Carg08759 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 171.8 bits (434), Expect = 6.3e-43
Identity = 88/150 (58.67%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 35  DKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFS 94
           D+IKGPWS EED +L  LV ++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEH  F+
Sbjct: 10  DRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFT 69

Query: 95  QAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVG 154
             EDD II AHAR+GN+WATIARLL GRTDNA+KNHWNSTLKR+            S   
Sbjct: 70  AEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGGGEEGQSCDF 129

Query: 155 GGSLVGVNDDPLTELTLATPGMDAGGDVAV 185
           GG+  G  D  LT+          GG V V
Sbjct: 130 GGN--GGYDGNLTDEKPLKRRASGGGGVVV 157

[Close]

BLAST of Carg08759 vs. TAIR 10
Match: AT3G09230.1 (myb domain protein 1 )

HSP 1 Score: 165.2 bits (417), Expect = 5.9e-41
Identity = 83/149 (55.70%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 35  DKIKGPWSAEEDRVLTRLVDRYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHHPFS 94
           D++KGPWS EED VL+ LV R G RNWS I+R + GRSGKSCRLRWCNQL P +  + F+
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 95  QAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRNDRKSAGNRTSDVG 154
           + ED AIIAAHA +GN+WA IA+LLPGRTDNA+KNHWNS L+RR  +  K+      ++G
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRRFIDFEKA-----KNIG 171

Query: 155 GGSLVGVND---DPLTELTLATPGMDAGG 181
            GSLV V+D   D  T +  +   + +GG
Sbjct: 172 TGSLV-VDDSGFDRTTTVASSEETLSSGG 194

The following BLAST results are available for this feature:

BLAST of Carg08759 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024234.1	6.8e-124	100.00	Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591358.1	2.0e-123	99.55	Transcription factor MYB73, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022937009.1	5.4e-121	98.65	transcription factor MYB44-like [Cucurbita moschata]	[more]
XP_022976001.1	7.8e-120	96.88	transcription factor MYB44-like [Cucurbita maxima]	[more]
XP_023536385.1	7.8e-120	97.32	transcription factor MYB73-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08759 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23160	9.5e-44	54.44	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q9FDW1	1.0e-42	55.48	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
Q9SN12	2.3e-42	70.75	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
Q42575	8.3e-40	55.70	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
O04192	8.9e-34	53.03	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]

BLAST of Carg08759 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9Y3	2.6e-121	98.65	transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111443433 PE...	[more]
A0A6J1IFQ1	3.8e-120	96.88	transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111476533 PE=4...	[more]
A0A5A7V9U0	6.5e-96	80.89	Transcriptional activator Myb-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BV53	6.5e-96	80.89	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103493514 PE=4 ...	[more]
A0A0A0L4S7	5.5e-95	79.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638510 PE=4 SV=1	[more]

BLAST of Carg08759 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37260.1	6.7e-45	54.44	myb domain protein 73	[more]
AT5G67300.1	7.4e-44	55.48	myb domain protein r1	[more]
AT3G50060.1	1.7e-43	70.75	myb domain protein 77	[more]
AT2G23290.1	6.3e-43	58.67	myb domain protein 70	[more]
AT3G09230.1	5.9e-41	55.70	myb domain protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 89..137 e-value: 9.6E-15 score: 65.0 coord: 37..86 e-value: 1.8E-13 score: 60.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 85..135 score: 8.977793
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 33..84 score: 11.47446
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 40..82 e-value: 1.32054E-14 score: 63.7486
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 92..135 e-value: 2.15697E-12 score: 57.9706
None	No IPR available	GENE3D	1.10.10.60		coord: 37..89 e-value: 3.1E-21 score: 77.0
None	No IPR available	GENE3D	1.10.10.60		coord: 91..153 e-value: 3.0E-21 score: 77.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..207
None	No IPR available	PANTHER	PTHR45614:SF131	SUBFAMILY NOT NAMED	coord: 1..207
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 92..133 e-value: 1.7E-13 score: 50.5 coord: 38..83 e-value: 7.2E-15 score: 54.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 35..88 score: 24.553061
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 92..139 score: 22.547276
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 35..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08759-RA	Carg08759-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding