Carg08738 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08738
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA glycosylase superfamily protein
Location	Carg_Chr09: 737986 .. 739090 (+)
RNA-Seq Expression	Carg08738
Synteny	Carg08738

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTGTTCGAGTTACTTGTATTATCACAAGCCTTAGCAGAGCTTACTTGGCCCTTGATTCTTTGCAAGAGAGATATATTTAGGTCTACTTTTCATTTTTGCCCAAAACTTGAATACAAATCAGTCCCTAAAAGAACATTGTTCTAAATTGTCTTCCGTTTCTCTCTTCTTTGCAGGAAGGTTTTTAATGATTTTGACCCATCTACCATCGCACAGTTCACACAGAATGAGTTTACGACACTAAAAGAAAATGGCATCCAGCTCCTATCTGAACCAAAGCTTCGTGCAATCGTGGAGAACGCTAATCAAGTACTCAAGGTATTGAGTTTTGGTTAAGCTTTAGCACTTCCTATTTTTTGTTAAGCCAAAGCCAACCCATAAGAACAGGCGTTTGGTTGTCACAACTTCCATCCCTTTCAAGCGGTTAAAAGCTGAATCTTTACGTTTCCATTGCCTTTTGACTTCTCCACAGATTCAACAGGAATTTGGTACCTTCAGCAACTATTGTTGGAGCTTTGTCAACAAGAAGCCTATAACAAACAGATTTCGATATGCCCGTCAAGTACCAGTAAAGACGCCGAAAGCAGAGTTCATGAGCAAGGATTTGCTAAGAAGAGGCTTTCGTTGTGTTGGGCCAACTGTGGTTTATTCCTTCATGCAGGTTACCGGAATTGTTAACGATCACTTAGTCAATTGCTTCAGATATCAAGAGTGCGATGGTATGAAATTAAGAGTAGAAGATCAGCGATCGGAGTTGCTCACCGGAGCTTTAGAGACTAGGTCTTGACATGTTCATAGAAGAAAAAAAAGGTTATCTCTAACTAATCTTAGAAATCAGTGTGATAAAATGGTTCTGATGGTCTGATGCTGAGTAGTTTAAGTTCTCCTTTGTTTAGAATTCTTAATTGTAATTTGTATTTACAGACGACAAAAACATGTTGGCTTCCTGTAACTATTTTTCAACCTTCAGAACACGCTTCGGTGGCAGAGCATAAGAACAATGGTATGTTTCTCTTACTCCAACATAACATTAGTAGTTTCCGTAAGATTTAAGGTTACGAGTCGCAGAATTCCAGGGTCGAATTCGAATATTCGAACTCATTAG

mRNA sequence

AAGCTGTTCGAGTTACTTGTATTATCACAAGCCTTAGCAGAGCTTACTTGGCCCTTGATTCTTTGCAAGAGAGATATATTTAGGAAGGTTTTTAATGATTTTGACCCATCTACCATCGCACAGTTCACACAGAATGAGTTTACGACACTAAAAGAAAATGGCATCCAGCTCCTATCTGAACCAAAGCTTCGTGCAATCGTGGAGAACGCTAATCAAGTACTCAAGAACACGCTTCGGTGGCAGAGCATAAGAACAATGGTATGTTTCTCTTACTCCAACATAACATTAGTAGTTTCCGTAAGATTTAAGGTTACGAGTCGCAGAATTCCAGGGTCGAATTCGAATATTCGAACTCATTAG

Coding sequence (CDS)

AAGCTGTTCGAGTTACTTGTATTATCACAAGCCTTAGCAGAGCTTACTTGGCCCTTGATTCTTTGCAAGAGAGATATATTTAGGAAGGTTTTTAATGATTTTGACCCATCTACCATCGCACAGTTCACACAGAATGAGTTTACGACACTAAAAGAAAATGGCATCCAGCTCCTATCTGAACCAAAGCTTCGTGCAATCGTGGAGAACGCTAATCAAGTACTCAAGAACACGCTTCGGTGGCAGAGCATAAGAACAATGGTATGTTTCTCTTACTCCAACATAACATTAGTAGTTTCCGTAAGATTTAAGGTTACGAGTCGCAGAATTCCAGGGTCGAATTCGAATATTCGAACTCATTAG

Protein sequence

KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSEPKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIPGSNSNIRTH

Homology

[Close]

BLAST of Carg08738 vs. NCBI nr
Match: KAG7024213.1 (tag, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.8 bits (595), Expect = 7.7e-58
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE
Sbjct: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIPGSNSNIRTH 120
           PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIPGSNSNIRTH
Sbjct: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIPGSNSNIRTH 119

[Close]

BLAST of Carg08738 vs. NCBI nr
Match: XP_022976629.1 (uncharacterized protein LOC111476975 [Cucurbita maxima] >XP_022976630.1 uncharacterized protein LOC111476975 [Cucurbita maxima] >XP_022976631.1 uncharacterized protein LOC111476975 [Cucurbita maxima])

HSP 1 Score: 149.1 bits (375), Expect = 2.5e-32
Identity = 83/110 (75.45%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE
Sbjct: 143 KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 202

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
           PKLRAIVENANQVLK    + +  +  C+S+ N   + + RF+  +R+IP
Sbjct: 203 PKLRAIVENANQVLKIQQEFGTF-SNYCWSFVNKKPITN-RFRY-ARQIP 249

[Close]

BLAST of Carg08738 vs. NCBI nr
Match: XP_022935907.1 (uncharacterized protein LOC111442674 [Cucurbita moschata] >XP_022935908.1 uncharacterized protein LOC111442674 [Cucurbita moschata] >XP_022935909.1 uncharacterized protein LOC111442674 [Cucurbita moschata] >XP_022935910.1 uncharacterized protein LOC111442674 [Cucurbita moschata])

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-32
Identity = 82/110 (74.55%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE
Sbjct: 148 KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 207

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
           PKLRAIVENANQVLK    + +  +  C+S+ N   + + RF+  +R++P
Sbjct: 208 PKLRAIVENANQVLKIQQEFGTF-SNYCWSFVNKKPITN-RFRY-ARQVP 254

[Close]

BLAST of Carg08738 vs. NCBI nr
Match: KAG6591330.1 (hypothetical protein SDJN03_13676, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-32
Identity = 82/110 (74.55%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE
Sbjct: 148 KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 207

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
           PKLRAIVENANQVLK    + +  +  C+S+ N   + + RF+  +R++P
Sbjct: 208 PKLRAIVENANQVLKIQQEFGTF-SNYCWSFVNKKPITN-RFRY-ARQVP 254

[Close]

BLAST of Carg08738 vs. NCBI nr
Match: XP_023535246.1 (uncharacterized protein LOC111796735 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.1 bits (370), Expect = 9.5e-32
Identity = 81/110 (73.64%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIA+FTQNEFTTLKENGIQLLSE
Sbjct: 148 KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAKFTQNEFTTLKENGIQLLSE 207

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
           PKLRAIVENANQVLK    + +  +  C+S+ N   + + RF+  +R++P
Sbjct: 208 PKLRAIVENANQVLKIQQEFGTF-SNYCWSFVNKKPITN-RFRY-ARQVP 254

[Close]

BLAST of Carg08738 vs. ExPASy Swiss-Prot
Match: Q7VG78 (Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) OX=235279 GN=guaA PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.3e-06
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFE LVL    A L+W  IL KR+ FR  F+DFDP  +A + +++   L  N   + + 
Sbjct: 819 KLFEHLVLEGFQAGLSWITILKKREAFRVAFDDFDPHIVANYDEDKIKELMRNEGIIRNR 878

Query: 61  PKLRAIVENA 71
            K+ A + NA
Sbjct: 879 AKIEAAIINA 888

[Close]

BLAST of Carg08738 vs. ExPASy Swiss-Prot
Match: P44321 (DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=tag PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05
Identity = 28/74 (37.84%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFE + L    A L+W  +L KR+ +R+ F+ FDP  IA+ T  +     +N   +   
Sbjct: 31  KLFEKICLEGQQAGLSWITVLKKRESYREAFHQFDPKKIAKMTALDIDACMQNSGLIRHR 90

Query: 61  PKLRAIVENANQVL 75
            KL AIV+NA   L
Sbjct: 91  AKLEAIVKNAKAYL 104

[Close]

BLAST of Carg08738 vs. ExPASy Swiss-Prot
Match: P05100 (DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) OX=83333 GN=tag PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-04
Identity = 34/114 (29.82%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFE++ L    A L+W  +L KR+ +R  F+ FDP  +A   + +   L ++   +   
Sbjct: 30  KLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHR 89

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIPGSNS 115
            K++AI+ NA   L+     Q+    V F +S +     V    T   IP S S
Sbjct: 90  GKIQAIIGNARAYLQME---QNGEPFVDFVWSFVNHQPQVTQATTLSEIPTSTS 140

[Close]

BLAST of Carg08738 vs. ExPASy TrEMBL
Match: A0A6J1IHE9 (uncharacterized protein LOC111476975 OS=Cucurbita maxima OX=3661 GN=LOC111476975 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 83/110 (75.45%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE
Sbjct: 143 KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 202

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
           PKLRAIVENANQVLK    + +  +  C+S+ N   + + RF+  +R+IP
Sbjct: 203 PKLRAIVENANQVLKIQQEFGTF-SNYCWSFVNKKPITN-RFRY-ARQIP 249

[Close]

BLAST of Carg08738 vs. ExPASy TrEMBL
Match: A0A6J1F6S0 (uncharacterized protein LOC111442674 OS=Cucurbita moschata OX=3662 GN=LOC111442674 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32
Identity = 82/110 (74.55%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE
Sbjct: 148 KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 207

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
           PKLRAIVENANQVLK    + +  +  C+S+ N   + + RF+  +R++P
Sbjct: 208 PKLRAIVENANQVLKIQQEFGTF-SNYCWSFVNKKPITN-RFRY-ARQVP 254

[Close]

BLAST of Carg08738 vs. ExPASy TrEMBL
Match: A0A0A0LG22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855280 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.1e-29
Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLIL KRD+FRKV NDFDPS+IAQFT+NEFTTLK NGIQLLSE
Sbjct: 141 KLFELLVLSQALAELTWPLILSKRDVFRKVLNDFDPSSIAQFTENEFTTLKVNGIQLLSE 200

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSN 94
           PKLRAIV+NANQVLK    + S  +  C+S+ N
Sbjct: 201 PKLRAIVDNANQVLKIQKEFGSF-SNYCWSFVN 232

[Close]

BLAST of Carg08738 vs. ExPASy TrEMBL
Match: A0A5D3BFN8 (Putative GMP synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00340 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-28
Identity = 73/93 (78.49%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLIL KRDIFRKV NDFDPS+IAQF +NEFTTLK NGIQLLSE
Sbjct: 141 KLFELLVLSQALAELTWPLILSKRDIFRKVLNDFDPSSIAQFKENEFTTLKVNGIQLLSE 200

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSN 94
           PKLRAIVENANQVLK    + S  +  C+S+ N
Sbjct: 201 PKLRAIVENANQVLKIQKEFGSF-SNYCWSFVN 232

[Close]

BLAST of Carg08738 vs. ExPASy TrEMBL
Match: A0A1S3CRP1 (probable GMP synthase [glutamine-hydrolyzing] OS=Cucumis melo OX=3656 GN=LOC103503975 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-28
Identity = 73/93 (78.49%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLVLSQALAELTWPLIL KRDIFRKV NDFDPS+IAQF +NEFTTLK NGIQLLSE
Sbjct: 141 KLFELLVLSQALAELTWPLILSKRDIFRKVLNDFDPSSIAQFKENEFTTLKVNGIQLLSE 200

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSN 94
           PKLRAIVENANQVLK    + S  +  C+S+ N
Sbjct: 201 PKLRAIVENANQVLKIQKEFGSF-SNYCWSFVN 232

[Close]

BLAST of Carg08738 vs. TAIR 10
Match: AT1G75090.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-21
Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELLV SQALAE +WP IL +RD FRK+F +FDPS IAQFT+    +L+ NG  +LSE
Sbjct: 149 KLFELLVFSQALAEFSWPSILRRRDDFRKLFEEFDPSAIAQFTEKRLMSLRVNGCLILSE 208

Query: 61  PKLRAIVENANQVLK 76
            KLRAIVENA  VLK
Sbjct: 209 QKLRAIVENAKSVLK 223

[Close]

BLAST of Carg08738 vs. TAIR 10
Match: AT1G80850.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           +LFELL LS ALAEL+W  IL KR +FR+VF DFDP  I++ T  + T+ +     LLSE
Sbjct: 164 RLFELLSLSGALAELSWKDILSKRQLFREVFMDFDPIAISELTNKKITSPEIAATTLLSE 223

Query: 61  PKLRAIVENANQVLK 76
            KLR+I+ENANQV K
Sbjct: 224 QKLRSILENANQVCK 238

[Close]

BLAST of Carg08738 vs. TAIR 10
Match: AT5G57970.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           +LFELLVLS ALAE TWP IL KR  FR+VF DFDP+ I +  + +          LLS+
Sbjct: 184 RLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTLLSD 243

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
            KLRA++ENA Q+LK    + S    +     N  +V   R++   R++P
Sbjct: 244 LKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQ---RQVP 290

[Close]

BLAST of Carg08738 vs. TAIR 10
Match: AT5G57970.2 (DNA glycosylase superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           +LFELLVLS ALAE TWP IL KR  FR+VF DFDP+ I +  + +          LLS+
Sbjct: 184 RLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTLLSD 243

Query: 61  PKLRAIVENANQVLKNTLRWQSIRTMVCFSYSNITLVVSVRFKVTSRRIP 111
            KLRA++ENA Q+LK    + S    +     N  +V   R++   R++P
Sbjct: 244 LKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQ---RQVP 290

[Close]

BLAST of Carg08738 vs. TAIR 10
Match: AT1G15970.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 8.0e-13
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 1   KLFELLVLSQALAELTWPLILCKRDIFRKVFNDFDPSTIAQFTQNEFTTLKENGIQLLSE 60
           KLFELL LS ALAEL+W  IL +R I R+VF DFDP  +A+    + T      I LLSE
Sbjct: 175 KLFELLCLSGALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTAPGTAAISLLSE 234

Query: 61  PKLRAIVENANQVLK 76
            K+R+I++N+  V K
Sbjct: 235 VKIRSILDNSRHVRK 249

The following BLAST results are available for this feature:

BLAST of Carg08738 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024213.1	7.7e-58	100.00	tag, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022976629.1	2.5e-32	75.45	uncharacterized protein LOC111476975 [Cucurbita maxima] >XP_022976630.1 uncharac...	[more]
XP_022935907.1	3.3e-32	74.55	uncharacterized protein LOC111442674 [Cucurbita moschata] >XP_022935908.1 unchar...	[more]
KAG6591330.1	3.3e-32	74.55	hypothetical protein SDJN03_13676, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023535246.1	9.5e-32	73.64	uncharacterized protein LOC111796735 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08738 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7VG78	9.3e-06	40.00	Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ...	[more]
P44321	1.2e-05	37.84	DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / D...	[more]
P05100	2.3e-04	29.82	DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) OX=83333 GN=t...	[more]

BLAST of Carg08738 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHE9	1.2e-32	75.45	uncharacterized protein LOC111476975 OS=Cucurbita maxima OX=3661 GN=LOC111476975...	[more]
A0A6J1F6S0	1.6e-32	74.55	uncharacterized protein LOC111442674 OS=Cucurbita moschata OX=3662 GN=LOC1114426...	[more]
A0A0A0LG22	8.1e-29	77.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855280 PE=4 SV=1	[more]
A0A5D3BFN8	1.4e-28	78.49	Putative GMP synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23...	[more]
A0A1S3CRP1	1.4e-28	78.49	probable GMP synthase [glutamine-hydrolyzing] OS=Cucumis melo OX=3656 GN=LOC1035...	[more]

BLAST of Carg08738 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75090.1	6.1e-21	66.67	DNA glycosylase superfamily protein	[more]
AT1G80850.1	1.3e-15	57.33	DNA glycosylase superfamily protein	[more]
AT5G57970.1	1.3e-15	42.73	DNA glycosylase superfamily protein	[more]
AT5G57970.2	1.3e-15	42.73	DNA glycosylase superfamily protein	[more]
AT1G15970.1	8.0e-13	50.67	DNA glycosylase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 1..109 e-value: 5.0E-21 score: 77.1
None	No IPR available	PANTHER	PTHR31116:SF25	DNA GLYCOSYLASE SUPERFAMILY PROTEIN	coord: 1..83
None	No IPR available	PANTHER	PTHR31116	OS04G0501200 PROTEIN	coord: 1..83
IPR005019	Methyladenine glycosylase	PFAM	PF03352	Adenine_glyco	coord: 1..87 e-value: 2.9E-18 score: 66.3
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08738-RA	Carg08738-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0008725	DNA-3-methyladenine glycosylase activity
molecular_function	GO:0003824	catalytic activity