Carg08696 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08696
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WAT1-related protein
Location	Carg_Chr09: 552050 .. 552733 (+)
RNA-Seq Expression	Carg08696
Synteny	Carg08696

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACAATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTCTACAAAGGTCCAACCATATACAGCCCTGGTGCTTCGCTGCAAGCAGCCACCATCTCACCCATTTTTGCTTCACTTGGGGACGCAAACGGCAAAAGCTGGACCCTGGGCTGCATCTTCTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTTGTTTTGCAGGCCCCTGTTTTGAAAAAATACCCGGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGGATCATCCAATTTGTCTTCATCGCTGCTATTGCTGAGAGAGATTCTCAGGCTTGGCTTTTCCACTCGGGTGGCGAAATTTTCAGCGTTCTCTATGCAGTAAGTGGGACTTCGCTAATTAAGAGATAGATAATGGGTTTATAAATAAGAAATACATTTTTTTTATTATAAGGCCTTCTAAAAAAAAAAAAAAAAATTAGGGAGAGCTTATGGTCAAAGTGGACAAGACAATATCTATTAATTTAAATAAATGGGTTAAATGTACAGGGAGTGGTAGCTTCGGGAATTGCTTTCGCGGTGCAAATATGGTGCATTCAAAGAGGTGGCCCGGTGTTCGTGGCTGTTTATCAACCAGTTCAGACACTCGTTGTGGCGGTCATGGCTTCCTTCGCGTTGGGTGAAGAGTTCTTCTTGGGA

mRNA sequence

ATGGGAACAATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTCTACAAAGGTCCAACCATATACAGCCCTGGTGCTTCGCTGCAAGCAGCCACCATCTCACCCATTTTTGCTTCACTTGGGGACGCAAACGGCAAAAGCTGGACCCTGGGCTGCATCTTCTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTTGTTTTGCAGGCCCCTGTTTTGAAAAAATACCCGGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGGATCATCCAATTTACACTCGTTGTGGCGGTCATGGCTTCCTTCGCGTTGGGTGAAGAGTTCTTCTTGGGA

Coding sequence (CDS)

ATGGGAACAATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTCTACAAAGGTCCAACCATATACAGCCCTGGTGCTTCGCTGCAAGCAGCCACCATCTCACCCATTTTTGCTTCACTTGGGGACGCAAACGGCAAAAGCTGGACCCTGGGCTGCATCTTCTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTTGTTTTGCAGGCCCCTGTTTTGAAAAAATACCCGGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGGATCATCCAATTTACACTCGTTGTGGCGGTCATGGCTTCCTTCGCGTTGGGTGAAGAGTTCTTCTTGGGA

Protein sequence

MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVAVMASFALGEEFFLG

Homology

[Close]

BLAST of Carg08696 vs. NCBI nr
Match: KAG7024172.1 (Protein WALLS ARE THIN 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL
Sbjct: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVAVMASFALGEEFFLG 114
           SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVAVMASFALGEEFFLG
Sbjct: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVAVMASFALGEEFFLG 113

[Close]

BLAST of Carg08696 vs. NCBI nr
Match: KAG6591287.1 (Protein WALLS ARE THIN 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 113/172 (65.70%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL
Sbjct: 151 MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 210

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF-------------------------- 114
           SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                          
Sbjct: 211 SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSSGEIFSVL 270

[Close]

BLAST of Carg08696 vs. NCBI nr
Match: XP_022935767.1 (protein WALLS ARE THIN 1-like [Cucurbita moschata])

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 113/172 (65.70%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL
Sbjct: 151 MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 210

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF-------------------------- 114
           SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                          
Sbjct: 211 SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVL 270

[Close]

BLAST of Carg08696 vs. NCBI nr
Match: XP_022974784.1 (protein WALLS ARE THIN 1-like [Cucurbita maxima])

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 113/172 (65.70%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL
Sbjct: 151 MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 210

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF-------------------------- 114
           SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                          
Sbjct: 211 SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVL 270

[Close]

BLAST of Carg08696 vs. NCBI nr
Match: XP_023535194.1 (protein WALLS ARE THIN 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47
Identity = 112/172 (65.12%), Postives = 112/172 (65.12%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           MGTICCVAGATVITLYKGPTIYSP ASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL
Sbjct: 151 MGTICCVAGATVITLYKGPTIYSPDASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 210

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF-------------------------- 114
           SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                          
Sbjct: 211 SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVL 270

[Close]

BLAST of Carg08696 vs. ExPASy Swiss-Prot
Match: Q94AP3 (Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana OX=3702 GN=WAT1 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-35
Identity = 88/175 (50.29%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQA---ATISPIFASLGDANGKSWTLGCIFLIG 60
           +GT  CVAGA+VITLYKGPTIY+P + L A    T S + A LG+A  K+WTLGCI+LIG
Sbjct: 148 LGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAPKNWTLGCIYLIG 207

Query: 61  HCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF----------------------- 114
           HCLSWSGWLV QAPVLK YPARLSVTSYTCFFGIIQF                       
Sbjct: 208 HCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELF 267

[Close]

BLAST of Carg08696 vs. ExPASy Swiss-Prot
Match: Q6J163 (Auxin-induced protein 5NG4 OS=Pinus taeda OX=3352 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-28
Identity = 58/102 (56.86%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPT---IYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIG 60
           +GT+ CV+GAT+ITLYKGP    I+ P   + A+       +   A  ++WTLGCI+L+G
Sbjct: 147 IGTVACVSGATIITLYKGPPITHIWRPNLEVTASYFKAFQGNDLSAKSENWTLGCIYLLG 206

Query: 61  HCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVA 100
           +CL+WSGW+VLQAPVLK+YPARLSVTS+TCFFG+IQF ++ A
Sbjct: 207 NCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAA 248

[Close]

BLAST of Carg08696 vs. ExPASy Swiss-Prot
Match: F4J9A3 (WAT1-related protein At3g53210 OS=Arabidopsis thaliana OX=3702 GN=At3g53210 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.5e-26
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           +GTI  VAG+ VITLYKGPTIY P  ++   TI P  A   +   K+WTLGC+ L+GHCL
Sbjct: 138 VGTIVSVAGSLVITLYKGPTIYQPSLNIVNQTIKPEEA---EEENKNWTLGCLCLMGHCL 197

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF 95
            WS W+VLQ+P+LKKYPAR S  SY+CFF +IQF
Sbjct: 198 CWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQF 228

[Close]

BLAST of Carg08696 vs. ExPASy Swiss-Prot
Match: Q9LV20 (WAT1-related protein At3g18200 OS=Arabidopsis thaliana OX=3702 GN=At3g18200 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.4e-24
Identity = 54/100 (54.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           +GT+  + GATVITLY+G  I+  G ++Q   +      +G  N  S TLG ++L+GHCL
Sbjct: 163 LGTLVSIGGATVITLYRGFPIFDQGLNMQKEEV------VGSDNSHSLTLGWLYLMGHCL 222

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVAV 101
           SW+GW+VLQAPVLK+YPA+L++TS+TCFFG+IQF LV+A+
Sbjct: 223 SWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQF-LVIAL 255

[Close]

BLAST of Carg08696 vs. ExPASy Swiss-Prot
Match: Q9M0B8 (WAT1-related protein At4g30420 OS=Arabidopsis thaliana OX=3702 GN=At4g30420 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 2   GTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCLS 61
           GTI CVAGA  +TL +GP I +  ++L  A    +   L D N  +W +GC+FL    L 
Sbjct: 131 GTILCVAGAISMTLLRGPKILNSESALPIA--KSVLGHLKDQN--TWLIGCLFLFSSTLC 190

Query: 62  WSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLV 98
           WS WL+LQ P+   YP  LS++++ C FG IQ  +V
Sbjct: 191 WSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVV 222

[Close]

BLAST of Carg08696 vs. ExPASy TrEMBL
Match: A0A6J1IIL1 (WAT1-related protein OS=Cucurbita maxima OX=3661 GN=LOC111473518 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 113/172 (65.70%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL
Sbjct: 151 MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 210

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF-------------------------- 114
           SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                          
Sbjct: 211 SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVL 270

[Close]

BLAST of Carg08696 vs. ExPASy TrEMBL
Match: A0A6J1F6I4 (WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111442590 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 113/172 (65.70%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL
Sbjct: 151 MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 210

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF-------------------------- 114
           SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                          
Sbjct: 211 SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVL 270

[Close]

BLAST of Carg08696 vs. ExPASy TrEMBL
Match: A0A0A0LGF9 (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_3G865390 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 104/174 (59.77%), Postives = 109/174 (62.64%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAA--TISPIFASLGDANGKSWTLGCIFLIGH 60
           +GTICCVAGATVITLYKGPTIYSP  SLQ A  T +PIFASLGDA+GKSWTLGC+FLIGH
Sbjct: 153 LGTICCVAGATVITLYKGPTIYSPTPSLQIAPITTAPIFASLGDASGKSWTLGCVFLIGH 212

Query: 61  CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF------------------------ 114
           CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                        
Sbjct: 213 CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVIIAAIAERDAQAWLFHSGGEIFS 272

[Close]

BLAST of Carg08696 vs. ExPASy TrEMBL
Match: A0A5D3E6C1 (WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008500 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42
Identity = 103/174 (59.20%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAA--TISPIFASLGDANGKSWTLGCIFLIGH 60
           +GTICCVAGATVITLYKGPTIYSP  SLQ    T +PIFASLGDA GKSWTLGC+FLIGH
Sbjct: 131 LGTICCVAGATVITLYKGPTIYSPTPSLQITPITTAPIFASLGDATGKSWTLGCVFLIGH 190

Query: 61  CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF------------------------ 114
           CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                        
Sbjct: 191 CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVIIAAIAERDAQAWLFHSGGEIFS 250

[Close]

BLAST of Carg08696 vs. ExPASy TrEMBL
Match: A0A1S3CRL2 (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103503904 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42
Identity = 103/174 (59.20%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAA--TISPIFASLGDANGKSWTLGCIFLIGH 60
           +GTICCVAGATVITLYKGPTIYSP  SLQ    T +PIFASLGDA GKSWTLGC+FLIGH
Sbjct: 153 LGTICCVAGATVITLYKGPTIYSPTPSLQITPITTAPIFASLGDATGKSWTLGCVFLIGH 212

Query: 61  CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF------------------------ 114
           CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF                        
Sbjct: 213 CLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVIIAAIAERDAQAWLFHSGGEIFS 272

[Close]

BLAST of Carg08696 vs. TAIR 10
Match: AT1G75500.1 (Walls Are Thin 1 )

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-36
Identity = 88/175 (50.29%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQA---ATISPIFASLGDANGKSWTLGCIFLIG 60
           +GT  CVAGA+VITLYKGPTIY+P + L A    T S + A LG+A  K+WTLGCI+LIG
Sbjct: 148 LGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAPKNWTLGCIYLIG 207

Query: 61  HCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF----------------------- 114
           HCLSWSGWLV QAPVLK YPARLSVTSYTCFFGIIQF                       
Sbjct: 208 HCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELF 267

[Close]

BLAST of Carg08696 vs. TAIR 10
Match: AT1G75500.2 (Walls Are Thin 1 )

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-36
Identity = 88/175 (50.29%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQA---ATISPIFASLGDANGKSWTLGCIFLIG 60
           +GT  CVAGA+VITLYKGPTIY+P + L A    T S + A LG+A  K+WTLGCI+LIG
Sbjct: 148 LGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAPKNWTLGCIYLIG 207

Query: 61  HCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF----------------------- 114
           HCLSWSGWLV QAPVLK YPARLSVTSYTCFFGIIQF                       
Sbjct: 208 HCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVFHSGWELF 267

[Close]

BLAST of Carg08696 vs. TAIR 10
Match: AT3G53210.1 (nodulin MtN21 /EamA-like transporter family protein )

HSP 1 Score: 118.6 bits (296), Expect = 3.2e-27
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           +GTI  VAG+ VITLYKGPTIY P  ++   TI P  A   +   K+WTLGC+ L+GHCL
Sbjct: 138 VGTIVSVAGSLVITLYKGPTIYQPSLNIVNQTIKPEEA---EEENKNWTLGCLCLMGHCL 197

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQF 95
            WS W+VLQ+P+LKKYPAR S  SY+CFF +IQF
Sbjct: 198 CWSSWIVLQSPLLKKYPARFSFVSYSCFFAVIQF 228

[Close]

BLAST of Carg08696 vs. TAIR 10
Match: AT3G18200.1 (nodulin MtN21 /EamA-like transporter family protein )

HSP 1 Score: 110.9 bits (276), Expect = 6.6e-25
Identity = 54/100 (54.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           +GT+  + GATVITLY+G  I+  G ++Q   +      +G  N  S TLG ++L+GHCL
Sbjct: 140 LGTLVSIGGATVITLYRGFPIFDQGLNMQKEEV------VGSDNSHSLTLGWLYLMGHCL 199

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVAV 101
           SW+GW+VLQAPVLK+YPA+L++TS+TCFFG+IQF LV+A+
Sbjct: 200 SWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQF-LVIAL 232

[Close]

BLAST of Carg08696 vs. TAIR 10
Match: AT3G18200.2 (nodulin MtN21 /EamA-like transporter family protein )

HSP 1 Score: 110.9 bits (276), Expect = 6.6e-25
Identity = 54/100 (54.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1   MGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCL 60
           +GT+  + GATVITLY+G  I+  G ++Q   +      +G  N  S TLG ++L+GHCL
Sbjct: 33  LGTLVSIGGATVITLYRGFPIFDQGLNMQKEEV------VGSDNSHSLTLGWLYLMGHCL 92

Query: 61  SWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFTLVVAV 101
           SW+GW+VLQAPVLK+YPA+L++TS+TCFFG+IQF LV+A+
Sbjct: 93  SWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQF-LVIAL 125

The following BLAST results are available for this feature:

BLAST of Carg08696 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024172.1	2.3e-56	100.00	Protein WALLS ARE THIN 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591287.1	3.1e-48	65.70	Protein WALLS ARE THIN 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022935767.1	3.1e-48	65.70	protein WALLS ARE THIN 1-like [Cucurbita moschata]	[more]
XP_022974784.1	3.1e-48	65.70	protein WALLS ARE THIN 1-like [Cucurbita maxima]	[more]
XP_023535194.1	2.0e-47	65.12	protein WALLS ARE THIN 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08696 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AP3	1.8e-35	50.29	Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana OX=3702 GN=WAT1 PE=1 SV=1	[more]
Q6J163	2.2e-28	56.86	Auxin-induced protein 5NG4 OS=Pinus taeda OX=3352 PE=2 SV=1	[more]
F4J9A3	4.5e-26	59.57	WAT1-related protein At3g53210 OS=Arabidopsis thaliana OX=3702 GN=At3g53210 PE=2...	[more]
Q9LV20	9.4e-24	54.00	WAT1-related protein At3g18200 OS=Arabidopsis thaliana OX=3702 GN=At3g18200 PE=2...	[more]
Q9M0B8	1.1e-13	42.71	WAT1-related protein At4g30420 OS=Arabidopsis thaliana OX=3702 GN=At4g30420 PE=3...	[more]

BLAST of Carg08696 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IIL1	1.5e-48	65.70	WAT1-related protein OS=Cucurbita maxima OX=3661 GN=LOC111473518 PE=3 SV=1	[more]
A0A6J1F6I4	1.5e-48	65.70	WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111442590 PE=3 SV=1	[more]
A0A0A0LGF9	1.2e-42	59.77	WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_3G865390 PE=3 SV=1	[more]
A0A5D3E6C1	4.6e-42	59.20	WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455...	[more]
A0A1S3CRL2	4.6e-42	59.20	WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103503904 PE=3 SV=1	[more]

BLAST of Carg08696 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75500.1	1.3e-36	50.29	Walls Are Thin 1	[more]
AT1G75500.2	1.3e-36	50.29	Walls Are Thin 1	[more]
AT3G53210.1	3.2e-27	59.57	nodulin MtN21 /EamA-like transporter family protein	[more]
AT3G18200.1	6.6e-25	54.00	nodulin MtN21 /EamA-like transporter family protein	[more]
AT3G18200.2	6.6e-25	54.00	nodulin MtN21 /EamA-like transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030184	WAT1-related protein	PANTHER	PTHR31218	WAT1-RELATED PROTEIN	coord: 1..95
None	No IPR available	PANTHER	PTHR31218:SF338	WAT1-RELATED PROTEIN	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08696-RA	Carg08696-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity