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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATGAAGGCGGGTTCGGCCCAGATTCATTGGCCCAGATCCATTGGCCCATCAAAATGCAAGGTTCTTCTTTCTAGTTTAAAGTTTTATTTCATTATTTTAATCTAGTTGATTTACATATTTATTCTTCGTTTATTTATCATTTATTTATTATTAATTTTTTAAAGACTGTTACTTATTTTTTTAATTACAATCGGTAGGAAGATTTGAGCCGCAAGACCTGTTTATTATCATTAATATTAAAAAAATTTATCATAATAAAGTCAACAATTGAACTGAAAAAGTCAACTTGAACCAAACAATTAGCATTATCTTGGCTTTGGTATTATTACCAAACCTCGTCAAATTTTGATTTTTTTTTTAAAAATTATGATAAAACAATTTTTTTTTTACTTAAAAATTTAAAACTAAAAACAGAAACAAAATCAGTTATGGGTCCACAGCTGTAGGGTCGGTAAATTTCCCGCCAAAAGCTGGGCGTTTTGGTCATTTGGAAAATTTGAAGACAGTTAATAAAAGTTGGAAATAGGACGTGGCTTAGATAGTTCCAATCCTTCTTGAACCAAAACGGCGATGATGCATTCCCTTTTCATAATCGCTAAACGACGGTTCCAATTCCTTATTAATTTTTAATTCTCATGCTAAAAGCGATAGTTATTAATTAAGAAATGATTGCAAGTCTTCGGTTTGCTTCTCTCTCTCAGAACCGAGGCCGGCAGCTAAATCTTCCCCCATCCAGCTGCCGCCCATCAATCATTTGGCGAGTGATGCTCACGGCAATGAAGTTGCTTCGATGAAGACAAGTCCTGGATCAACTTCGATTTCCATCGTAGGTCAGTTCACTGCTTCTCCCGAATGCTTGTTCTGA mRNA sequence ATGGATGAAGGCGGGTTCGGCCCAGATTCATTGGCCCAGATCCATTGGCCCATCAAAATGCAAGAACCGAGGCCGGCAGCTAAATCTTCCCCCATCCAGCTGCCGCCCATCAATCATTTGGCGAGTGATGCTCACGGCAATGAAGTTGCTTCGATGAAGACAAGTCCTGGATCAACTTCGATTTCCATCGTAGGTCAGTTCACTGCTTCTCCCGAATGCTTGTTCTGA Coding sequence (CDS) ATGGATGAAGGCGGGTTCGGCCCAGATTCATTGGCCCAGATCCATTGGCCCATCAAAATGCAAGAACCGAGGCCGGCAGCTAAATCTTCCCCCATCCAGCTGCCGCCCATCAATCATTTGGCGAGTGATGCTCACGGCAATGAAGTTGCTTCGATGAAGACAAGTCCTGGATCAACTTCGATTTCCATCGTAGGTCAGTTCACTGCTTCTCCCGAATGCTTGTTCTGA Protein sequence MDEGGFGPDSLAQIHWPIKMQEPRPAAKSSPIQLPPINHLASDAHGNEVASMKTSPGSTSISIVGQFTASPECLF
Homology
BLAST of Carg08672 vs. NCBI nr
Match: KAG7024148.1 (hypothetical protein SDJN02_12961, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 1 MDEGGFGPDSLAQIHWPIKMQEPRPAAKSSPIQLPPINHLASDAHGNEVASMKTSPGSTS 60
MDEGGFGPDSLAQIHWPIKMQEPRPAAKSSPIQLPPINHLASDAHGNEVASMKTSPGSTS
Sbjct: 1 MDEGGFGPDSLAQIHWPIKMQEPRPAAKSSPIQLPPINHLASDAHGNEVASMKTSPGSTS 60
Query: 61 ISIVGQFTASPECLF 76
ISIVGQFTASPECLF
Sbjct: 61 ISIVGQFTASPECLF 75
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7024148.1 | 1.3e-34 | 100.00 | hypothetical protein SDJN02_12961, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 19..39 |
Relationships
The following mRNA feature(s) are a part of this gene:
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